Cmc10g0260941 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc10g0260941
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome b6-f complex subunit 4
Location	CMiso1.1chr10: 2990 .. 3409 (+)
RNA-Seq Expression	Cmc10g0260941
Synteny	Cmc10g0260941

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTCATAATTATTACGGAGAACCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTCATTCTAGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATGATTGGTGAACCCGCAGATCCATTTGCAACTCCTTTGGAAATATTGCCGGAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATGGTTTCCGTACCGGCGGGATTATTAACTGTACCATTTTTGGAGAATGTCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACAACCGTCTTTTTGATTGGTACCGCAGTAGCTCTTTGGTTGGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGGGCTTTTTTAA

mRNA sequence

ATGGGTCATAATTATTACGGAGAACCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTCATTCTAGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATGATTGGTGAACCCGCAGATCCATTTGCAACTCCTTTGGAAATATTGCCGGAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATGGTTTCCGTACCGGCGGGATTATTAACTGTACCATTTTTGGAGAATGTCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACAACCGTCTTTTTGATTGGTACCGCAGTAGCTCTTTGGTTGGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGGGCTTTTTTAA

Coding sequence (CDS)

ATGGGTCATAATTATTACGGAGAACCCGCATGGCCCAATGATCTTTTATATATTTTTCCAGTAGTCATTCTAGGTACTATTGCATGTAACGTGGGCTTAGCGGTTCTAGAACCATCAATGATTGGTGAACCCGCAGATCCATTTGCAACTCCTTTGGAAATATTGCCGGAATGGTATTTCTTTCCCGTATTTCAAATACTTCGTACAGTGCCAAATAAGTTATTGGGTGTTCTTTTAATGGTTTCCGTACCGGCGGGATTATTAACTGTACCATTTTTGGAGAATGTCAATAAATTCCAAAATCCATTTCGTCGTCCAGTAGCGACAACCGTCTTTTTGATTGGTACCGCAGTAGCTCTTTGGTTGGGTATTGGAGCAACATTACCGATTGATAAATCCCTAACTTTAGGGCTTTTTTAA

Protein sequence

MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYFFPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATLPIDKSLTLGLF

Homology

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BLAST of Cmc10g0260941 vs. NCBI nr
Match: YP_009461758.1 (cytochrome b/f [Chionanthus parkinsonii] >YP_009547847.1 PetD [Petunia x hybrida] >YP_009695105.1 PetD [Philadelphus calvescens] >YP_009698906.1 PetD [Carpenteria californica] >YP_009752781.1 cytochrome b6/f subunit IV [Cyclantheropsis parviflora] >YP_009915444.1 cytochrome b6/f complex subunit IV [Calibrachoa hybrid cultivar] >YP_009930664.1 cytochrome b6/f complex subunit IV [Petunia exserta] >QHN53524.1 cytochrome b6/f complex subunit IV [Oreocnide frutescens] >QWW33861.1 cytochrome b6/f complex subunit IV [Thermopsis alpina] >QWW33945.1 cytochrome b6/f complex subunit IV [Thermopsis lanceolata] >QWW34029.1 cytochrome b6/f complex subunit IV [Thermopsis turkestanica] >AUG33683.1 PetD [Petunia x hybrida])

HSP 1 Score: 284.3 bits (726), Expect = 5.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

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BLAST of Cmc10g0260941 vs. NCBI nr
Match: QWQ51329.1 (cytochrome b6-f complex subunit IV [Dickinsia hydrocotyloides])

HSP 1 Score: 284.3 bits (726), Expect = 5.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 36  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 95

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 96  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 155

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 156 WLGIGATLPIDKSLTLGLF 174

[Close]

BLAST of Cmc10g0260941 vs. NCBI nr
Match: YP_009627422.1 (cytochrome b6/f complex subunit IV [Tinospora cordifolia] >QCC70872.1 cytochrome b6/f complex subunit IV [Tinospora cordifolia] >QJF59506.1 cytochrome b6/f complex subunit IV [Tinospora sinensis])

HSP 1 Score: 284.3 bits (726), Expect = 5.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 36  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 95

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 96  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 155

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 156 WLGIGATLPIDKSLTLGLF 174

[Close]

BLAST of Cmc10g0260941 vs. NCBI nr
Match: QYF07576.1 (cytochrome b6/f complex subunit IV [Prinsepia utilis])

HSP 1 Score: 284.3 bits (726), Expect = 5.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 23  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 82

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 83  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 142

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 143 WLGIGATLPIDKSLTLGLF 161

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BLAST of Cmc10g0260941 vs. NCBI nr
Match: ADD31066.1 (cytochrome b6/f complex subunit IV protein [Ficus sp. Moore 315])

HSP 1 Score: 284.3 bits (726), Expect = 5.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

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BLAST of Cmc10g0260941 vs. ExPASy Swiss-Prot
Match: Q7FNS2 (Cytochrome b6-f complex subunit 4 OS=Atropa belladonna OX=33113 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-76
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy Swiss-Prot
Match: Q4VZK4 (Cytochrome b6-f complex subunit 4 OS=Cucumis sativus OX=3659 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-76
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy Swiss-Prot
Match: Q2L939 (Cytochrome b6-f complex subunit 4 OS=Gossypium hirsutum OX=3635 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-76
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy Swiss-Prot
Match: Q1KXS8 (Cytochrome b6-f complex subunit 4 OS=Helianthus annuus OX=4232 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-76
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy Swiss-Prot
Match: Q06RA1 (Cytochrome b6-f complex subunit 4 OS=Jasminum nudiflorum OX=126431 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 7.6e-76
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy TrEMBL
Match: A0A7H1KFU8 (Cytochrome b6-f complex subunit 4 OS=Meconopsis henrici OX=248836 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy TrEMBL
Match: A0A292G397 (Cytochrome b6-f complex subunit 4 OS=Vitis x champinii OX=884146 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy TrEMBL
Match: A0A1U9YE37 (Cytochrome b6-f complex subunit 4 OS=Rehmannia glutinosa OX=99300 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy TrEMBL
Match: A0A6B9TT79 (Cytochrome b6-f complex subunit 4 OS=Gonostegia hirta OX=648870 GN=petD PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. ExPASy TrEMBL
Match: A0A1U8LXQ6 (Cytochrome b OS=Gossypium hirsutum OX=3635 GN=LOC107931915 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 2.8e-73
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 827 MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 886

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL
Sbjct: 887 FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 946

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 947 WLGIGATLPIDKSLTLGLF 965

[Close]

BLAST of Cmc10g0260941 vs. TAIR 10
Match: ATCG00730.1 (photosynthetic electron transfer D )

HSP 1 Score: 282.7 bits (722), Expect = 1.6e-76
Identity = 138/139 (99.28%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 1   MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 60
           MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF
Sbjct: 22  MGHNYYGEPAWPNDLLYIFPVVILGTIACNVGLAVLEPSMIGEPADPFATPLEILPEWYF 81

Query: 61  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVAL 120
           FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTA AL
Sbjct: 82  FPVFQILRTVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAAAL 141

Query: 121 WLGIGATLPIDKSLTLGLF 140
           WLGIGATLPIDKSLTLGLF
Sbjct: 142 WLGIGATLPIDKSLTLGLF 160

[Close]

BLAST of Cmc10g0260941 vs. TAIR 10
Match: AT2G07727.1 (Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal )

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-09
Identity = 38/123 (30.89%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 17  YIFPVVILGTIACNVGLAV---LEPSMIGE-----PADPFATPLEILPEWYFFPVFQILR 76
           Y +   ++G +A  +  ++     P+++G      PA+P +TP  I+PEWYF P+  ILR
Sbjct: 230 YFYVKDLVGWVAFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILR 289

Query: 77  TVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATL 132
           ++P+K  GV  +  V   LL +PF +++    + F RP+   +F +  A  L LG     
Sbjct: 290 SIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSF-RPIHQGMFWLLLADCLLLGWIGCQ 349

[Close]

BLAST of Cmc10g0260941 vs. TAIR 10
Match: ATMG00220.1 (apocytochrome b )

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-09
Identity = 38/123 (30.89%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 17  YIFPVVILGTIACNVGLAV---LEPSMIGE-----PADPFATPLEILPEWYFFPVFQILR 76
           Y +   ++G +A  +  ++     P+++G      PA+P +TP  I+PEWYF P+  ILR
Sbjct: 230 YFYVKDLVGWVAFAIFFSIWIFYAPNVLGHPDNYIPANPMSTPPHIVPEWYFLPIHAILR 289

Query: 77  TVPNKLLGVLLMVSVPAGLLTVPFLENVNKFQNPFRRPVATTVFLIGTAVALWLGIGATL 132
           ++P+K  GV  +  V   LL +PF +++    + F RP+   +F +  A  L LG     
Sbjct: 290 SIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSF-RPIHQGMFWLLLADCLLLGWIGCQ 349

The following BLAST results are available for this feature:

BLAST of Cmc10g0260941 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009461758.1	5.8e-73	100.00	cytochrome b/f [Chionanthus parkinsonii] >YP_009547847.1 PetD [Petunia x hybrida...	[more]
QWQ51329.1	5.8e-73	100.00	cytochrome b6-f complex subunit IV [Dickinsia hydrocotyloides]	[more]
YP_009627422.1	5.8e-73	100.00	cytochrome b6/f complex subunit IV [Tinospora cordifolia] >QCC70872.1 cytochrome...	[more]
QYF07576.1	5.8e-73	100.00	cytochrome b6/f complex subunit IV [Prinsepia utilis]	[more]
ADD31066.1	5.8e-73	100.00	cytochrome b6/f complex subunit IV protein [Ficus sp. Moore 315]	[more]

BLAST of Cmc10g0260941 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7FNS2	7.6e-76	100.00	Cytochrome b6-f complex subunit 4 OS=Atropa belladonna OX=33113 GN=petD PE=3 SV=...	[more]
Q4VZK4	7.6e-76	100.00	Cytochrome b6-f complex subunit 4 OS=Cucumis sativus OX=3659 GN=petD PE=3 SV=1	[more]
Q2L939	7.6e-76	100.00	Cytochrome b6-f complex subunit 4 OS=Gossypium hirsutum OX=3635 GN=petD PE=3 SV=...	[more]
Q1KXS8	7.6e-76	100.00	Cytochrome b6-f complex subunit 4 OS=Helianthus annuus OX=4232 GN=petD PE=3 SV=1	[more]
Q06RA1	7.6e-76	100.00	Cytochrome b6-f complex subunit 4 OS=Jasminum nudiflorum OX=126431 GN=petD PE=3 ...	[more]

BLAST of Cmc10g0260941 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7H1KFU8	2.8e-73	100.00	Cytochrome b6-f complex subunit 4 OS=Meconopsis henrici OX=248836 GN=petD PE=3 S...	[more]
A0A292G397	2.8e-73	100.00	Cytochrome b6-f complex subunit 4 OS=Vitis x champinii OX=884146 GN=petD PE=3 SV...	[more]
A0A1U9YE37	2.8e-73	100.00	Cytochrome b6-f complex subunit 4 OS=Rehmannia glutinosa OX=99300 GN=petD PE=3 S...	[more]
A0A6B9TT79	2.8e-73	100.00	Cytochrome b6-f complex subunit 4 OS=Gonostegia hirta OX=648870 GN=petD PE=3 SV=...	[more]
A0A1U8LXQ6	2.8e-73	100.00	Cytochrome b OS=Gossypium hirsutum OX=3635 GN=LOC107931915 PE=3 SV=1	[more]

BLAST of Cmc10g0260941 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00730.1	1.6e-76	99.28	photosynthetic electron transfer D	[more]
AT2G07727.1	4.8e-09	30.89	Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal	[more]
ATMG00220.1	4.8e-09	30.89	apocytochrome b	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005870	Cytochrome b6/f complex, subunit IV	TIGRFAM	TIGR01156	TIGR01156	coord: 1..139 e-value: 2.4E-88 score: 292.0
IPR005870	Cytochrome b6/f complex, subunit IV	PIRSF	PIRSF000033	Cytochrome_b6f_IV	coord: 1..139 e-value: 8.0E-83 score: 273.8
IPR005798	Cytochrome b/b6, C-terminal	PFAM	PF00032	Cytochrom_B_C	coord: 44..132 e-value: 9.8E-20 score: 70.7
IPR005798	Cytochrome b/b6, C-terminal	PROSITE	PS51003	CYTB_CTER	coord: 44..139 score: 16.129162
IPR005798	Cytochrome b/b6, C-terminal	CDD	cd00290	cytochrome_b_C	coord: 1..139 e-value: 6.32657E-55 score: 167.052
None	No IPR available	GENE3D	1.10.287.980	plastocyanin oxidoreductase	coord: 46..138 e-value: 1.4E-29 score: 104.1
None	No IPR available	GENE3D	1.20.5.510	Single helix bin	coord: 1..45 e-value: 3.3E-32 score: 111.9
None	No IPR available	PANTHER	PTHR19271	CYTOCHROME B	coord: 1..137
None	No IPR available	PANTHER	PTHR19271:SF22	CYTOCHROME B6/F COMPLEX, SUBUNIT IV-RELATED	coord: 1..137
IPR036150	Cytochrome b/b6, C-terminal domain superfamily	SUPERFAMILY	81648	a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)	coord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc10g0260941.1	Cmc10g0260941.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009767	photosynthetic electron transport chain
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0042651	thylakoid membrane
molecular_function	GO:0045158	electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0016491	oxidoreductase activity