Cmc09g0260301 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0260301
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Polypyrimidine tract-binding protein-like protein 2
Location	CMiso1.1chr09: 23614624 .. 23620535 (+)
RNA-Seq Expression	Cmc09g0260301
Synteny	Cmc09g0260301

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATGCTTACAGAAAAGCCCATCGAAATCTTCTCCCTTTCCAGCTCTCCGTGAAACCCTAACTTCCATATCCTCACCAATTCCTTGCTTTCCTCAGGGTTTATCTTTAATAATCTCAGGTATTTTACTTTGCAATTTCGATCTCCTTGTGTACCGCTATTTTTTGCTCCCAATTTTTAGGTATTTCGACCTCGGATACTGTCTATTTCCGTCTGGATTTGCGCTTTGGGGTTTTCGATCTGCATGTCTGTTTCTTCACAGATTGTTTTGGGTCTTTTGGCTTTTTTCCATTTTTTTTTAGTGTAATCAATTGTTTCTTATGTGATTTTGCATCTAAGTATTTTTGTTGTAATTACGTGGACGATGAATGGCATTGCAATGTTGTGTGAATTGTTGGATTGATTTCTATGATGAGTACTCGATAATGGATTGTGAACTGCTCTAGTTATTTGTACGTGTTGATATTTATTGGTGATGTTGCTTTTACTCTTTATGTTTGGTGGCTCGATTTGTGCTTCGAAATTGCCTTTGATTGGACATGTGGTGATTAAATTTTTTGGTCCGTTTGTTTCTGTTTTCAATATTAAGTGCTTTTTCTGTTTTCAATATTAAGTGCTTCCTCTGAAAGTTAGGGAGAAGAGAAAAAGTAGAAGAGGAAGAAGCCAGAGAAAGAGAGTGCAGATTAAAGTCAAACAACTATCCATTACTAATTAAGAAACCCCCTTTTTTTACTGCCTTGTCTTTTTTTATGTACGAAAATTTATACCGCTGTTGTAATGTAATGCACACCTTCTTTTTTTTAAAAAAATTGCACGCCTTTTTGTTCTTAAATTGAACTTGCTATAATGGTTCAATTTTATGCCATGGGCTAAAGCCGAAGACAGTTATCTTAATAGAAAAAGAAACTTATTCATTAATGATTGTGATTGTATTTTATTCATCTCCAGATTCTTCTCTTGCACGAAAAGTAACGACAATGAAATATTGTTCACATCAATGTAGAATTAGGGATTCCATGGTAAAATTGTCTATGTGATAGGGAATTATAAGTTCATGAGTGTGAAGTTCTGTGTTAACTTTGTGGACTAAGTTTGAAGTTTAAATTGAATTAAGGCTTCCCATGATTTTCCAGTGTTCTCCTGTAAGTTGGGCGAAATGGCATCAGTTTCTAGTCAGCCACAATTCCGTTACACCCAACCACCGTCAAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGTACCGAGGAGGAACTCATTGAACTGGGAAAGCCATTTGGAAAAGTCGTGAATACAAAATGTAATGTTGGAGCAAACAGAAATCAAGCTTTTATTGAGTTTGTAAGTGCATTATTTTTGCATCTATTGCTTTCCATCAACAATGGACCTCACTAGCTATTCATTATTGATAAATATTTGACCAAGTTTAATACTGCAGGCAGACATAAATCAAGCTATTGCAATGATATCATATTATGCATCTTCCTCTGAGCCTGCTCAAGTTAGAGGAAAAACTGTCTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAATAAAACAACAGCTGATGTTCCTGGAAATGTGCTTTTAGTAACAATTGAGGGCACTGATGCACGCCTTGTCAGCATTGATGTTTTGCACTTGGTAAGCAGATTGTAGTACATTCTTGTTGCAGTTAAAGGTGAACCTCTGTGGCACTGAGATTAAATTATGGAGATTAGGTTATAGTTTGTCATGTTTCAAAAGCTTTTGTTTGACGTGAATGTAAATGAATCAGCAGGCCCTTGTCAAGGCAATATCTTTGATGGCAGCTTAGTGCATCGGGAGAAAGTGCACATGTGTGTTTGTCTCCTTTCTCCTTTCCTTAACACTACCTCTCTCTTCCCTTCTCTTCTTCCTCAACTTCCTCCTACCTTTCACAGTTTAGGATATTATCATTTCTGCTCTCTTGTGCATCCTTCTCCCTATCATCTCTGCATGTTATGTCAGTGATACTGCTGTCTACATCCAGTCATTAGAATCAGAGAGTAGGAATTTTTTTTTCTTAATTTTTCGATTATCTGTTCACTATTTACGTATTATGCCCTAAAAGACTAACATTTTAAAAAATTAGACAGAAGATTAATCAGATGATATTCCTTTTGGCTTAGCATCTGAATTTTTGGGGTGACTTTGCTTTCTCTTATTAAAATTATAGGACGAATGTTAAATTTGTAGGGGCATTCAACTATTAGTTTACAGCTTATTTTGTTGATGAGTATTTAAGGATAGAGTATACTTATGGCTGGTTATTGATTTCAAACCAGTAGCTGCTCGTTTTCAAGTGAGAGAGGCAGGTGTTACGGACTTGTTTTGAATTTGTGTTTTTTGCTATATCATATCTTCCCTCTCAGAGGAGTTGAAACGTACTTCTTGACCTTTGATTGCCATATGTCATGATGTGTTCTAATCTTCTGTTTTATTTGATGTCTAAGTTCTATGTTATTCTTGAAATTTTTTTTTTGTATCTTCCGTCATATGTTGTCTTTTTACTCTTGTTCCTGGCAGTATCATTGCTATCACAAGAATAAAGTTCTATTTGCTTAATTTTTAGTTTCTTATAGTGGAGTTTGCATTTAAATGTCCAATGTTAATTAGTTGTAGCTATCCATTTAGACATCCTACTTGATCTATATTTGGAGATTTAGGTAGGTTCGTCATGGTTATGATTGTAAATAATTCACATGATAGTAGTCATTTGATAGGTGTTGGGATGTACTGAAATTGTGATGAATGGTGTGATATCATTTTGTTTAATTTCAATCTGAAGTTTATTCAATAATATGCCAGGTTTTTTCTGCCTTTGGATTTGTGCATAAGATTACTACCTTCGAGAAAACAGCTGGATTTCAGGTCCGTGAATATCTATAATACTTGTAGTAATTACACTATTATTATTTCTGAGCTTGGAGAAAATCTTATTCCTATATCGATGTGGACATTTTAGGCGTTGGTGCAATTTTCGGATGCGGAGACTGCCTCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGGTGACAATTGTATTGAATGTTACACATGGTTTTTTGCCCCTGTTTTATGGAGTGTATAGCAGTAGAAGAGGTGCACATGCACGAGCTTGGTGTCTGTCGATTATTTTTGTTCTTAGTAGTCAATGCATTTTATTTGACTGAAAGATTTTCATTCCATTGCCTGCAGTATTCAACCTGATTCTTCTATGTTATTCTATTTTATGTATCAACAATTTTTTTTTTGTTTGCAGGTATTTGCTTCCGGATCATGTTGGACCATGTTCCCTTAGAATCACTTACTCTGCCCATACTGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGTCTTGCCAACTTTCTGCTTCTATTCTTTTATGAATGTGTTTATTTCAACTTAGTGTAACATTTCACAATATCTCACAGATAATTTTCCATGTTACTCGTCTGTTTTATCAGTATCCCTTTCTCTCTCTACTTTCTGATAGTATGTTGATTCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGGTAAGGAATGTATTAGGTAGCATGTTGTTTAGTTGTGCCTATGAATTCTCCTTTCTGTACGTGTTACTCATCTGATAAGAAAATGCTTCAAATGTTGTCAAATAAATAAAGAAAGATAAAGCTTCAAATGATGTACTTCTGACAAAAGTGCTAGCTTATCAGTATAAATCTTGACATTTCTTCTTATTGCCTGGTTTTTTATGTTATTTTTCTAAATCCTTTTCATCCTTTGATTGAATTTTTCGTCAGTCACCTTTGCAGTTCACCGTGGGTTTGGATGGAAAGAAACTCGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATATGCAGTCACCTTGGAGGTTTTGCACATGGTATTGCATGACGTGGCAATTTTATAATGAGTTTGTCTGTTGACTATTTATTCATATAGTATAGTTCTTTGCAAATTATTTTATTATGCTAACCAATTATTTCTTTGTCGGTAGGTTTTTTCTGCATTTGGACCTGTCCAGAAGATTGCCATGTTTGATAAGAATGGGGGAGTCCAGGCCTTGATTCAATATCCAGGTATTTCGCTTTAACTAAACTCTTCCTGACATCAATCTCACTTTTGGGTGCAAATGGTAGCATATTTTCTACCGGTTATAACATGATAGAAACCACATTCTTTATGAGTTCAAAATAGGGTTTTTTTTTTTGTTATTTCAAATCTGTGAACGAGTTAAATTAACCTTAAAGAACTAGAAGCTTAATCTTAAATAGCTAGAATTTGAGATTTGTAGTGCAATATGAGTTTAAGAAGACAAACACAGCAACGTATTAATATGGTTCAAATTTCAATCTTCATCCATAGTATTTCAATAGAAATATGTAGCATAGAAATCATCATCAGTAATATTCCACTTGTGAGCAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTCGAGGGACACTGTATTTATGACGGAGGGTTTTGCAAGCTTCACATCTCATATTCTCGCCATACTGATTTGAGTATCAAGGTATTAAAAACTTCTCTTTTGGTGAGCTGTCCAAGAGCAATATATGTCTCTTTACACAGGAGTTCTTACTTCAATGAAGGTAGTACATGTACTACCGTAGCATTAAGCACTAGACATTTTCCTGGTCCTTGGTGGCCTCATCATCATCAACAAATATTTATTGAAATGAAGATATTATTATAAAAACTATTTAAATTAAAACTCGAAGTTTTTATTTCCTAATTAAGAGCATGTTTTCAATGAACTTTTCTAGTGCTTTGATAAATGCTCTGAAAACAAAAGAAGTTGTTTTTAAGCCCTAAAGTTTTTGCTAGCCGACCCAAGTTATAAATCTTGTTATTATAAGTATCCATATTTTGTAAAATATATGGGAGATATCAAATAATCCTGAATATTGGTTGGGCCCTCCGGTTCATTTCAACCCTTTGACTATACAGAAGATGAATGATCCTAAATGTGTAGTTTGATGTGATTGTAGGTGAATAACGACCGAAGTCGAGACTATACAATTCCAAATAATCCTCCCATGGTGAATTCCCAACCGCCTGTTGTGGGGCAGCAACAACCACATCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAATCAGTATGGTCCTTCCGGAGAGCAGCAGCCTGGGGTGCAGCCTCCACAATCTTCAGGTTGGGGATCGGGCGGTCCTGCTGCGCCCTACTCCTCCATGCCCATGCACAATCCTGGTTACATGCCATCGGGGACAATGCCGCCACAGCATGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCGTATCGCCCCGATCACAGGCAATAGCACGCATTGTCTTCTGTTTTATAGTTGAATGTTCATTCAAGAAAACCAACTAAGCTTTTTAAAGCACTAGAAATGCATTTTGGCAGAGGAAACAAATGTGCATTAAAATTCGATGGTTCCGCGAACTACTCTCACTGTTCAGAACAAATTAGGTCGGTTCATTTCCCTTTTATTTTAAGGGATGTGAATGAATGAATGTAAGATCCCAAGTGTGAAGAACCGAGCACCTTCCTTTTGCTGTTTATTGATGATCACTGTTTTATAAGTCTTTCTCTTCCTTTTGCTCATTCTTATCACTTCTTGAACTTAATCCTCATTTATGCAATGTACTTTGTTTCAACTGTGGCTAAACTGAGTTGTCTCTCCCCCAGGCTGATGAAACATTGTATTGACGGCACTTTATCTACATCTAAAATTGTGTTTTTTCTTTGTTATGTATTAACGTTAGGGATCTTTTGAAA

mRNA sequence

TTATGCTTACAGAAAAGCCCATCGAAATCTTCTCCCTTTCCAGCTCTCCGTGAAACCCTAACTTCCATATCCTCACCAATTCCTTGCTTTCCTCAGGGTTTATCTTTAATAATCTCAGTGTTCTCCTGTAAGTTGGGCGAAATGGCATCAGTTTCTAGTCAGCCACAATTCCGTTACACCCAACCACCGTCAAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGTACCGAGGAGGAACTCATTGAACTGGGAAAGCCATTTGGAAAAGTCGTGAATACAAAATGTAATGTTGGAGCAAACAGAAATCAAGCTTTTATTGAGTTTGCAGACATAAATCAAGCTATTGCAATGATATCATATTATGCATCTTCCTCTGAGCCTGCTCAAGTTAGAGGAAAAACTGTCTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAATAAAACAACAGCTGATGTTCCTGGAAATGTGCTTTTAGTAACAATTGAGGGCACTGATGCACGCCTTGTCAGCATTGATGTTTTGCACTTGGTTTTTTCTGCCTTTGGATTTGTGCATAAGATTACTACCTTCGAGAAAACAGCTGGATTTCAGGCGTTGGTGCAATTTTCGGATGCGGAGACTGCCTCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGGTATTTGCTTCCGGATCATGTTGGACCATGTTCCCTTAGAATCACTTACTCTGCCCATACTGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGTCACCTTTGCAGTTCACCGTGGGTTTGGATGGAAAGAAACTCGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATATGCAGTCACCTTGGAGGTTTTGCACATGGTTTTTTCTGCATTTGGACCTGTCCAGAAGATTGCCATGTTTGATAAGAATGGGGGAGTCCAGGCCTTGATTCAATATCCAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTCGAGGGACACTGTATTTATGACGGAGGGTTTTGCAAGCTTCACATCTCATATTCTCGCCATACTGATTTGAGTATCAAGGTGAATAACGACCGAAGTCGAGACTATACAATTCCAAATAATCCTCCCATGGTGAATTCCCAACCGCCTGTTGTGGGGCAGCAACAACCACATCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAATCAGTATGGTCCTTCCGGAGAGCAGCAGCCTGGGGTGCAGCCTCCACAATCTTCAGGTTGGGGATCGGGCGGTCCTGCTGCGCCCTACTCCTCCATGCCCATGCACAATCCTGGTTACATGCCATCGGGGACAATGCCGCCACAGCATGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCGTATCGCCCCGATCACAGGCAATAGCACGCATTGTCTTCTGTTTTATAGTTGAATGTTCATTCAAGAAAACCAACTAAGCTTTTTAAAGCACTAGAAATGCATTTTGGCAGAGGAAACAAATGTGCATTAAAATTCGATGGTTCCGCGAACTACTCTCACTGTTCAGAACAAATTAGGTCGGTTCATTTCCCTTTTATTTTAAGGGATGTGAATGAATGAATGTAAGATCCCAAGTGTGAAGAACCGAGCACCTTCCTTTTGCTGTTTATTGATGATCACTGTTTTATAAGTCTTTCTCTTCCTTTTGCTCATTCTTATCACTTCTTGAACTTAATCCTCATTTATGCAATGTACTTTGTTTCAACTGTGGCTAAACTGAGTTGTCTCTCCCCCAGGCTGATGAAACATTGTATTGACGGCACTTTATCTACATCTAAAATTGTGTTTTTTCTTTGTTATGTATTAACGTTAGGGATCTTTTGAAA

Coding sequence (CDS)

ATGGCATCAGTTTCTAGTCAGCCACAATTCCGTTACACCCAACCACCGTCAAAGGTTCTCCACTTGAGGAATTTACCTTGGGAATGTACCGAGGAGGAACTCATTGAACTGGGAAAGCCATTTGGAAAAGTCGTGAATACAAAATGTAATGTTGGAGCAAACAGAAATCAAGCTTTTATTGAGTTTGCAGACATAAATCAAGCTATTGCAATGATATCATATTATGCATCTTCCTCTGAGCCTGCTCAAGTTAGAGGAAAAACTGTCTATCTGCAGTATTCTAACCGGCAAGAAATTGTGAACAATAAAACAACAGCTGATGTTCCTGGAAATGTGCTTTTAGTAACAATTGAGGGCACTGATGCACGCCTTGTCAGCATTGATGTTTTGCACTTGGTTTTTTCTGCCTTTGGATTTGTGCATAAGATTACTACCTTCGAGAAAACAGCTGGATTTCAGGCGTTGGTGCAATTTTCGGATGCGGAGACTGCCTCATCTGCTAAGAATGCCTTGGATGGGAGAAGCATCCCTAGGTATTTGCTTCCGGATCATGTTGGACCATGTTCCCTTAGAATCACTTACTCTGCCCATACTGATTTGACTGTGAAATTTCAGAGCCATCGAAGCAGGGACTACACTAATCCTTATCTTCCTGTTGCTCCATCGGCCATAGATGGAAGTGGTCAGTCACCTTTGCAGTTCACCGTGGGTTTGGATGGAAAGAAACTCGAACCAGAGAGTAATGTTCTTCTTGCCTCCATTGAGAATATGCAATATGCAGTCACCTTGGAGGTTTTGCACATGGTTTTTTCTGCATTTGGACCTGTCCAGAAGATTGCCATGTTTGATAAGAATGGGGGAGTCCAGGCCTTGATTCAATATCCAGATGTTCAGACTGCGGTAGTTGCCAAGGAAGCCCTCGAGGGACACTGTATTTATGACGGAGGGTTTTGCAAGCTTCACATCTCATATTCTCGCCATACTGATTTGAGTATCAAGGTGAATAACGACCGAAGTCGAGACTATACAATTCCAAATAATCCTCCCATGGTGAATTCCCAACCGCCTGTTGTGGGGCAGCAACAACCACATCAAATGATGGGTCCTTCCACTCATCAATACAATGGAAATCAGTATGGTCCTTCCGGAGAGCAGCAGCCTGGGGTGCAGCCTCCACAATCTTCAGGTTGGGGATCGGGCGGTCCTGCTGCGCCCTACTCCTCCATGCCCATGCACAATCCTGGTTACATGCCATCGGGGACAATGCCGCCACAGCATGGTATGATGCCAAGCCCCAGTGGTTTACACCAGACACCACCACCACCGTATCGCCCCGATCACAGGCAATAG

Protein sequence

MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDGKKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ

Homology

[Close]

BLAST of Cmc09g0260301 vs. NCBI nr
Match: KAA0042561.1 (polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 902.1 bits (2330), Expect = 1.9e-258
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 306 MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 365

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 366 EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 425

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 426 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 485

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG
Sbjct: 486 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 545

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 546 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 605

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ
Sbjct: 606 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 665

Query: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420
           QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG
Sbjct: 666 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 725

Query: 421 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 726 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 754

[Close]

BLAST of Cmc09g0260301 vs. NCBI nr
Match: TYK05965.1 (polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 888.6 bits (2295), Expect = 2.2e-254
Identity = 445/449 (99.11%), Postives = 445/449 (99.11%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360

Query: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420
           QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG
Sbjct: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420

Query: 421 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 445

[Close]

BLAST of Cmc09g0260301 vs. NCBI nr
Match: XP_008437579.1 (PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [Cucumis melo])

HSP 1 Score: 888.6 bits (2295), Expect = 2.2e-254
Identity = 445/449 (99.11%), Postives = 445/449 (99.11%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 306 MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 365

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 366 EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 425

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 426 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 485

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 486 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 545

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 546 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 605

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ
Sbjct: 606 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 665

Query: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420
           QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG
Sbjct: 666 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 725

Query: 421 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 726 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 750

[Close]

BLAST of Cmc09g0260301 vs. NCBI nr
Match: KAE8647805.1 (hypothetical protein Csa_000640 [Cucumis sativus])

HSP 1 Score: 886.3 bits (2289), Expect = 1.1e-253
Identity = 446/457 (97.59%), Postives = 446/457 (97.59%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQS LQFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSSLQFTVGLDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV-- 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV  
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360

Query: 361 ------GQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH 420
                 GQQ PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAA YSSMPMH
Sbjct: 361 GPGQGQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH 420

Query: 421 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 457

[Close]

BLAST of Cmc09g0260301 vs. NCBI nr
Match: XP_031741225.1 (polypyrimidine tract-binding protein homolog 2 [Cucumis sativus])

HSP 1 Score: 875.9 bits (2262), Expect = 1.5e-250
Identity = 443/457 (96.94%), Postives = 443/457 (96.94%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 366 MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 425

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 426 EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 485

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 486 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 545

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 546 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 605

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 606 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 665

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV-- 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV  
Sbjct: 666 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 725

Query: 361 ------GQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH 420
                 GQQ PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAA YSSMPMH
Sbjct: 726 GPGQGQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH 785

Query: 421 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 786 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 818

[Close]

BLAST of Cmc09g0260301 vs. ExPASy Swiss-Prot
Match: Q9FGL9 (Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At5g53180 PE=1 SV=1)

HSP 1 Score: 643.3 bits (1658), Expect = 2.1e-183
Identity = 348/438 (79.45%), Postives = 366/438 (83.56%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFG VVNTKCNVGANRNQAFI
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF D+NQAI MISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DAR+VSIDVLHLVFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           L + VG CSL+ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +G    Q  VG+DG
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTG----QVAVGVDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KK+EPESNVLLASIENMQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTA
Sbjct: 241 KKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQP---PV 360
           VVAKEALEGHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P 
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPY 360

Query: 361 VGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGP---AAPYSSMPMHNP 420
            G  Q +   G S HQ      G  G  QPG Q   S G G GG     AP SS  MH  
Sbjct: 361 AGNPQQYHAAGGSHHQQQQQPQG--GWVQPGGQ--GSMGMGGGGHNHYMAPPSSSSMHQG 420

Query: 421 GYMPSGTMPPQHGMMPSP 433
              P G MPPQH   P P
Sbjct: 421 ---PGGHMPPQHYGGPGP 427

[Close]

BLAST of Cmc09g0260301 vs. ExPASy Swiss-Prot
Match: Q9MAC5 (Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PTB PE=1 SV=1)

HSP 1 Score: 533.9 bits (1374), Expect = 1.8e-150
Identity = 280/425 (65.88%), Postives = 328/425 (77.18%), Query Frame = 0


Query: 3   SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 62
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 63  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 122
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 182
             VSIDV+HLVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 183 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDGKK 242
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS    +Q  +G DGKK
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGS----MQPALGADGKK 241

Query: 243 LEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVV 302
           +E +SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +
Sbjct: 242 VESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAM 301

Query: 303 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQ 362
           AKEALEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V    
Sbjct: 302 AKEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSA 361

Query: 363 PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTM 422
           P                 P+G Q P  Q  Q SG+G     +PY        G  PSG  
Sbjct: 362 P-----------------PAGWQNPQAQ-SQYSGYG----GSPYMYPSSDPNGASPSG-Q 399

Query: 423 PPQHG 428
           PP +G
Sbjct: 422 PPYYG 399

[Close]

BLAST of Cmc09g0260301 vs. ExPASy Swiss-Prot
Match: Q6ICX4 (Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g43190 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-35
Identity = 111/353 (31.44%), Postives = 187/353 (52.97%), Query Frame = 0


Query: 17  SKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYA 76
           SKV+H+RN+  E +E +L++L +PFG  V TK  +   +NQA ++  D++ A++ + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFG--VITKLVMLRAKNQALLQMQDVSSAVSALQFF- 64

Query: 77  SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 136
           ++ +P  +RG+ VY+Q+S+ QE+     N     D P  +LLVTI       +++DVLH 
Sbjct: 65  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 124

Query: 137 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 196
           VFS +GFV K+ TF+K+AGFQAL+Q+   + A+SA+ AL GR+I       + G C L I
Sbjct: 125 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 184

Query: 197 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDGKKLEPESNVLLA 256
            +S   +L V + + RSRDYTNP LP       G    P     G+   ++   S +  A
Sbjct: 185 QFSNLEELQVNYNNDRSRDYTNPNLPAEQK---GRSSHPCYGDTGVAYPQMANTSAIAAA 244

Query: 257 ------------------SIENMQY-AVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQ 316
                              + N+   ++  + L  +FS +G + +I +  +N    AL+Q
Sbjct: 245 FGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALVQ 304

Query: 317 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN 347
             D   A +A   L+G  ++     +L +++S+H +++   +   S DY   N
Sbjct: 305 MGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNITPGTD---SHDYVNSN 335

[Close]

BLAST of Cmc09g0260301 vs. ExPASy Swiss-Prot
Match: Q9UKA9 (Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.7e-31
Identity = 97/248 (39.11%), Postives = 129/248 (52.02%), Query Frame = 0


Query: 16  PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYY 75
           PS+VLH+R LP E TE E+I LG PFGKV N     G  +NQAF+E A    AI M++YY
Sbjct: 57  PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG--KNQAFLELATEEAAITMVNYY 116

Query: 76  ASSSEPAQVRGKTVYLQYSNRQEIVNNKT----------------TADVP---------- 135
             S+    +R + +Y+QYSN +E+  + T                TA+ P          
Sbjct: 117 --SAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQAVLQAVTAVQTANTPLSGTTVSESA 176

Query: 136 -----GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETA 195
                  VL + I+      V++DVLH +FS FG V KI TF K   FQAL+Q+ D   A
Sbjct: 177 VTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNA 236

Query: 196 SSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAI 233
             AK ALDG++I       +   C+LRI +S   +L VK+ + +SRDYT P LP      
Sbjct: 237 QQAKLALDGQNI-------YNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP------ 286

[Close]

BLAST of Cmc09g0260301 vs. ExPASy Swiss-Prot
Match: Q91Z31 (Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV=2)

HSP 1 Score: 138.7 bits (348), Expect = 1.7e-31
Identity = 97/248 (39.11%), Postives = 129/248 (52.02%), Query Frame = 0


Query: 16  PSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYY 75
           PS+VLH+R LP E TE E+I LG PFGKV N     G  +NQAF+E A    AI M++YY
Sbjct: 57  PSRVLHIRKLPGEVTETEVIALGLPFGKVTNILMLKG--KNQAFLELATEEAAITMVNYY 116

Query: 76  ASSSEPAQVRGKTVYLQYSNRQEIVNNKT----------------TADVP---------- 135
             S+    +R + +Y+QYSN +E+  + T                TA+ P          
Sbjct: 117 --SAVTPHLRNQPIYIQYSNHKELKTDNTLNQRAQVVLQAVTAVQTANTPLSGTTVSESA 176

Query: 136 -----GNVLLVTIEGTDARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETA 195
                  VL + I+      V++DVLH +FS FG V KI TF K   FQAL+Q+ D   A
Sbjct: 177 VTPAQSPVLRIIIDNM-YYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNA 236

Query: 196 SSAKNALDGRSIPRYLLPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAI 233
             AK ALDG++I       +   C+LRI +S   +L VK+ + +SRDYT P LP      
Sbjct: 237 QQAKLALDGQNI-------YNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLP------ 286

[Close]

BLAST of Cmc09g0260301 vs. ExPASy TrEMBL
Match: A0A5A7TLW2 (Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G00560 PE=4 SV=1)

HSP 1 Score: 902.1 bits (2330), Expect = 9.2e-259
Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 306 MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 365

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 366 EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 425

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 426 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 485

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG
Sbjct: 486 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 545

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 546 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 605

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ
Sbjct: 606 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 665

Query: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420
           QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG
Sbjct: 666 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 725

Query: 421 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 726 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 754

[Close]

BLAST of Cmc09g0260301 vs. ExPASy TrEMBL
Match: A0A5D3C3L0 (Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00590 PE=4 SV=1)

HSP 1 Score: 888.6 bits (2295), Expect = 1.1e-254
Identity = 445/449 (99.11%), Postives = 445/449 (99.11%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360

Query: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420
           QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG
Sbjct: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420

Query: 421 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 445

[Close]

BLAST of Cmc09g0260301 vs. ExPASy TrEMBL
Match: A0A1S3AUZ4 (LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis melo OX=3656 GN=LOC103482951 PE=4 SV=1)

HSP 1 Score: 888.6 bits (2295), Expect = 1.1e-254
Identity = 445/449 (99.11%), Postives = 445/449 (99.11%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 306 MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 365

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 366 EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 425

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 426 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 485

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 486 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 545

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 546 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 605

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ
Sbjct: 606 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 665

Query: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420
           QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG
Sbjct: 666 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 725

Query: 421 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 726 TMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 750

[Close]

BLAST of Cmc09g0260301 vs. ExPASy TrEMBL
Match: A0A0A0KLY8 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139570 PE=4 SV=1)

HSP 1 Score: 875.9 bits (2262), Expect = 7.0e-251
Identity = 443/457 (96.94%), Postives = 443/457 (96.94%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG    QFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSG----QFTVGLDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV-- 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVV  
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360

Query: 361 ------GQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMH 420
                 GQQ PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAA YSSMPMH
Sbjct: 361 GPGQGQGQQPPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAATYSSMPMH 420

Query: 421 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 450
           NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 NPGYMPSGTMPPQHGMMPSPSGLHQTPPPPYRPDHRQ 453

[Close]

BLAST of Cmc09g0260301 vs. ExPASy TrEMBL
Match: A0A6J1IDD4 (polypyrimidine tract-binding protein homolog 2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471547 PE=4 SV=1)

HSP 1 Score: 847.8 bits (2189), Expect = 2.1e-242
Identity = 434/451 (96.23%), Postives = 436/451 (96.67%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI
Sbjct: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT
Sbjct: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL
Sbjct: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG
Sbjct: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KK+EPESNVLLASIENMQYAVTLEVLHMVFS+FGPVQKIAMFDKNGGVQALIQYPDVQTA
Sbjct: 241 KKIEPESNVLLASIENMQYAVTLEVLHMVFSSFGPVQKIAMFDKNGGVQALIQYPDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQ 360
           VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN P MVNSQPPVVG 
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNTPSMVNSQPPVVG- 360

Query: 361 QQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSG 420
           QQP QMMGPSTHQYNGNQY PS E QPGVQP  SSGWGSGGPAAPY SMPMHNP YM SG
Sbjct: 361 QQPGQMMGPSTHQYNGNQYSPSAE-QPGVQPQPSSGWGSGGPAAPY-SMPMHNPAYMSSG 420

Query: 421 TMPPQ--HGMMPSPSGLHQTPPPPYRPDHRQ 450
           TMPPQ   GMMPSPSGLHQTPPPPYRPDHRQ
Sbjct: 421 TMPPQMAPGMMPSPSGLHQTPPPPYRPDHRQ 448

[Close]

BLAST of Cmc09g0260301 vs. TAIR 10
Match: AT5G53180.1 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 643.3 bits (1658), Expect = 1.5e-184
Identity = 348/438 (79.45%), Postives = 366/438 (83.56%), Query Frame = 0


Query: 1   MASVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFI 60
           M+SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFG VVNTKCNVGANRNQAFI
Sbjct: 1   MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI 60

Query: 61  EFADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGT 120
           EF D+NQAI MISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADV GNVLLVTIEG 
Sbjct: 61  EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD 120

Query: 121 DARLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYL 180
           DAR+VSIDVLHLVFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYL
Sbjct: 121 DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL 180

Query: 181 LPDHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDG 240
           L + VG CSL+ITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +G    Q  VG+DG
Sbjct: 181 LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTG----QVAVGVDG 240

Query: 241 KKLEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTA 300
           KK+EPESNVLLASIENMQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTA
Sbjct: 241 KKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTA 300

Query: 301 VVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQP---PV 360
           VVAKEALEGHCIYDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P 
Sbjct: 301 VVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPY 360

Query: 361 VGQQQPHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGP---AAPYSSMPMHNP 420
            G  Q +   G S HQ      G  G  QPG Q   S G G GG     AP SS  MH  
Sbjct: 361 AGNPQQYHAAGGSHHQQQQQPQG--GWVQPGGQ--GSMGMGGGGHNHYMAPPSSSSMHQG 420

Query: 421 GYMPSGTMPPQHGMMPSP 433
              P G MPPQH   P P
Sbjct: 421 ---PGGHMPPQHYGGPGP 427

[Close]

BLAST of Cmc09g0260301 vs. TAIR 10
Match: AT3G01150.1 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 533.9 bits (1374), Expect = 1.3e-151
Identity = 280/425 (65.88%), Postives = 328/425 (77.18%), Query Frame = 0


Query: 3   SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 62
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 63  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 122
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 182
             VSIDV+HLVFSAFGFVHKI TFEK AGFQALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 HEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 183 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDGKK 242
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS    +Q  +G DGKK
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGS----MQPALGADGKK 241

Query: 243 LEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVV 302
           +E +SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +
Sbjct: 242 VESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAM 301

Query: 303 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQ 362
           AKEALEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V    
Sbjct: 302 AKEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSA 361

Query: 363 PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTM 422
           P                 P+G Q P  Q  Q SG+G     +PY        G  PSG  
Sbjct: 362 P-----------------PAGWQNPQAQ-SQYSGYG----GSPYMYPSSDPNGASPSG-Q 399

Query: 423 PPQHG 428
           PP +G
Sbjct: 422 PPYYG 399

[Close]

BLAST of Cmc09g0260301 vs. TAIR 10
Match: AT3G01150.2 (polypyrimidine tract-binding protein 1 )

HSP 1 Score: 470.3 bits (1209), Expect = 1.7e-132
Identity = 254/425 (59.76%), Postives = 302/425 (71.06%), Query Frame = 0


Query: 3   SVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEF 62
           S S Q QFRYTQ PSKV+HLRNLPWEC EEELI+L K FGK+VNTK NVGANRNQAF+EF
Sbjct: 2   SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61

Query: 63  ADINQAIAMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVPGNVLLVTIEGTDA 122
           AD+NQAI+M+SYYASSSEPAQ+RGKTVY+QYSNR EIVNN++  DVPGNVLLVT EG ++
Sbjct: 62  ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIVNNQSPGDVPGNVLLVTFEGVES 121

Query: 123 RLVSIDVLHLVFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLP 182
                                         +ALVQF+D ETAS+A++ALDGRSIPRYLL 
Sbjct: 122 H-----------------------------EALVQFTDVETASAARSALDGRSIPRYLLS 181

Query: 183 DHVGPCSLRITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDGKK 242
            HVG CSLR++YSAHTDL +KFQSHRSRDYTNPYLPV  +A+DGS    +Q  +G DGKK
Sbjct: 182 AHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQTAMDGS----MQPALGADGKK 241

Query: 243 LEPESNVLLASIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVV 302
           +E +SNVLL  IENMQYAVT++VLH VFSA+G VQKIA+F+KNG  QALIQY D+ TA +
Sbjct: 242 VESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAM 301

Query: 303 AKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQPPVVGQQQ 362
           AKEALEGHCIYDGG+CKL +SYSRHTDL++K  +D+SRDYT+P+   +V  + P V    
Sbjct: 302 AKEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSA 361

Query: 363 PHQMMGPSTHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGPAAPYSSMPMHNPGYMPSGTM 422
           P                 P+G Q P  Q  Q SG+G     +PY        G  PSG  
Sbjct: 362 P-----------------PAGWQNPQAQ-SQYSGYG----GSPYMYPSSDPNGASPSG-Q 370

Query: 423 PPQHG 428
           PP +G
Sbjct: 422 PPYYG 370

[Close]

BLAST of Cmc09g0260301 vs. TAIR 10
Match: AT5G53180.2 (polypyrimidine tract-binding protein 2 )

HSP 1 Score: 398.7 bits (1023), Expect = 6.3e-111
Identity = 224/306 (73.20%), Postives = 239/306 (78.10%), Query Frame = 0


Query: 133 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 192
           VFSAFGFVHKITTFEKTAG+QALVQF+DAETA++AK ALDGRSIPRYLL + VG CSL+I
Sbjct: 33  VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 92

Query: 193 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDGKKLEPESNVLLA 252
           TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAID +G    Q  VG+DGKK+EPESNVLLA
Sbjct: 93  TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTG----QVAVGVDGKKMEPESNVLLA 152

Query: 253 SIENMQYAVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQYPDVQTAVVAKEALEGHCI 312
           SIENMQYAVTL+VLHMVF+AFG VQKIAMFDKNGGVQALIQY DVQTAVVAKEALEGHCI
Sbjct: 153 SIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAKEALEGHCI 212

Query: 313 YDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPNNPPMVNSQP---PVVGQQQPHQMMGP 372
           YDGGFCKLHI+YSRHTDLSIKVNNDRSRDYT+PN P  +  QP   P  G  Q +   G 
Sbjct: 213 YDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAGNPQQYHAAGG 272

Query: 373 STHQYNGNQYGPSGEQQPGVQPPQSSGWGSGGP---AAPYSSMPMHNPGYMPSGTMPPQH 432
           S HQ      G  G  QPG Q   S G G GG     AP SS  MH     P G MPPQH
Sbjct: 273 SHHQQQQQPQG--GWVQPGGQ--GSMGMGGGGHNHYMAPPSSSSMHQG---PGGHMPPQH 327

[Close]

BLAST of Cmc09g0260301 vs. TAIR 10
Match: AT1G43190.1 (polypyrimidine tract-binding protein 3 )

HSP 1 Score: 152.5 bits (384), Expect = 7.9e-37
Identity = 111/353 (31.44%), Postives = 187/353 (52.97%), Query Frame = 0


Query: 17  SKVLHLRNLPWECTEEELIELGKPFGKVVNTKCNVGANRNQAFIEFADINQAIAMISYYA 76
           SKV+H+RN+  E +E +L++L +PFG  V TK  +   +NQA ++  D++ A++ + ++ 
Sbjct: 5   SKVVHVRNVGHEISENDLLQLFQPFG--VITKLVMLRAKNQALLQMQDVSSAVSALQFF- 64

Query: 77  SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVPGNVLLVTIEGTDARLVSIDVLHL 136
           ++ +P  +RG+ VY+Q+S+ QE+     N     D P  +LLVTI       +++DVLH 
Sbjct: 65  TNVQPT-IRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHM-LYPITVDVLHQ 124

Query: 137 VFSAFGFVHKITTFEKTAGFQALVQFSDAETASSAKNALDGRSIPRYLLPDHVGPCSLRI 196
           VFS +GFV K+ TF+K+AGFQAL+Q+   + A+SA+ AL GR+I       + G C L I
Sbjct: 125 VFSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNI-------YDGCCQLDI 184

Query: 197 TYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDGSGQSPLQFTVGLDGKKLEPESNVLLA 256
            +S   +L V + + RSRDYTNP LP       G    P     G+   ++   S +  A
Sbjct: 185 QFSNLEELQVNYNNDRSRDYTNPNLPAEQK---GRSSHPCYGDTGVAYPQMANTSAIAAA 244

Query: 257 ------------------SIENMQY-AVTLEVLHMVFSAFGPVQKIAMFDKNGGVQALIQ 316
                              + N+   ++  + L  +FS +G + +I +  +N    AL+Q
Sbjct: 245 FGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLL-RNKPDHALVQ 304

Query: 317 YPDVQTAVVAKEALEGHCIYDGGFCKLHISYSRHTDLSIKVNNDRSRDYTIPN 347
             D   A +A   L+G  ++     +L +++S+H +++   +   S DY   N
Sbjct: 305 MGDGFQAELAVHFLKGAMLFGK---RLEVNFSKHPNITPGTD---SHDYVNSN 335

The following BLAST results are available for this feature:

BLAST of Cmc09g0260301 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0042561.1	1.9e-258	100.00	polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa]	[more]
TYK05965.1	2.2e-254	99.11	polypyrimidine tract-binding protein-like protein 2 [Cucumis melo var. makuwa]	[more]
XP_008437579.1	2.2e-254	99.11	PREDICTED: LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 [...	[more]
KAE8647805.1	1.1e-253	97.59	hypothetical protein Csa_000640 [Cucumis sativus]	[more]
XP_031741225.1	1.5e-250	96.94	polypyrimidine tract-binding protein homolog 2 [Cucumis sativus]	[more]

BLAST of Cmc09g0260301 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FGL9	2.1e-183	79.45	Polypyrimidine tract-binding protein homolog 2 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9MAC5	1.8e-150	65.88	Polypyrimidine tract-binding protein homolog 1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q6ICX4	1.1e-35	31.44	Polypyrimidine tract-binding protein homolog 3 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9UKA9	1.7e-31	39.11	Polypyrimidine tract-binding protein 2 OS=Homo sapiens OX=9606 GN=PTBP2 PE=1 SV=...	[more]
Q91Z31	1.7e-31	39.11	Polypyrimidine tract-binding protein 2 OS=Mus musculus OX=10090 GN=Ptbp2 PE=1 SV...	[more]

BLAST of Cmc09g0260301 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TLW2	9.2e-259	100.00	Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa ...	[more]
A0A5D3C3L0	1.1e-254	99.11	Polypyrimidine tract-binding protein-like protein 2 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3AUZ4	1.1e-254	99.11	LOW QUALITY PROTEIN: polypyrimidine tract-binding protein homolog 2 OS=Cucumis m...	[more]
A0A0A0KLY8	7.0e-251	96.94	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139570 PE=4 SV...	[more]
A0A6J1IDD4	2.1e-242	96.23	polypyrimidine tract-binding protein homolog 2-like isoform X1 OS=Cucurbita maxi...	[more]

BLAST of Cmc09g0260301 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53180.1	1.5e-184	79.45	polypyrimidine tract-binding protein 2	[more]
AT3G01150.1	1.3e-151	65.88	polypyrimidine tract-binding protein 1	[more]
AT3G01150.2	1.7e-132	59.76	polypyrimidine tract-binding protein 1	[more]
AT5G53180.2	6.3e-111	73.20	polypyrimidine tract-binding protein 2	[more]
AT1G43190.1	7.9e-37	31.44	polypyrimidine tract-binding protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 251..321 e-value: 0.16 score: 13.7 coord: 19..92 e-value: 1.3E-9 score: 47.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 22..73 e-value: 4.7E-8 score: 32.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 18..96 score: 11.946341
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 5..109 e-value: 8.6E-26 score: 92.3
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 246..350 e-value: 2.9E-36 score: 125.7 coord: 110..221 e-value: 7.8E-33 score: 114.7
None	No IPR available	PFAM	PF13893	RRM_5	coord: 109..176 e-value: 0.0054 score: 16.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..449
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 338..401
None	No IPR available	PANTHER	PTHR15592:SF29	POLYPYRIMIDINE TRACT-BINDING PROTEIN HOMOLOG 2	coord: 1..438
None	No IPR available	PANTHER	PTHR15592	MATRIN 3/NUCLEAR PROTEIN 220-RELATED	coord: 1..438
IPR021790	PTBP1, RNA recognition motif 2-like	PFAM	PF11835	RRM_8	coord: 247..325 e-value: 1.8E-8 score: 34.4
IPR034793	PTBPH1/PTBPH2, RNA recognition motif 2	CDD	cd12691	RRM2_PTBPH1_PTBPH2	coord: 110..204 e-value: 1.06169E-60 score: 190.828
IPR034794	PTBPH1/PTBPH2, RNA recognition motif 3	CDD	cd12690	RRM3_PTBPH1_PTBPH2	coord: 247..343 e-value: 3.40715E-67 score: 207.79
IPR034792	PTBPH1/PTBPH2, RNA recognition motif 1	CDD	cd12686	RRM1_PTBPH1_PTBPH2	coord: 16..96 e-value: 8.41792E-57 score: 180.523
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 6..101
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 125..218
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 253..348

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0260301.1	Cmc09g0260301.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding