Cmc09g0259931 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0259931
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description60S ribosomal protein L9
LocationCMiso1.1chr09: 23450349 .. 23452608 (-)
RNA-Seq ExpressionCmc09g0259931
SyntenyCmc09g0259931
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTCCTCTCTTCCTCTCTTTCCCAATACTATAAATCTTCACCATTTTCCTGATTAGGGTTTTTGTTCGTTCTTGGCCGTCCCCTTCATCGTTCCCAGAGAGAGGGAGAGAGTAAGTTGCAATAGTAAAAGATGAAGACGATCCTCTCATCTGAAACCATGGATATCCCCGACGGGGTGAAGATCAAAGTGAACGCCAAAATCATCGAGGTCGAAGGGCCTAGAGGGAAGCTCGTTCGCAATTTCAAGCATTTGAATCTCGATTTCCAGTTGATCACTGACGAGGATACCGGAAAGAAGAAGCTGAAGATTGATGCATGGTTTGGCTCCAGGAAGACTTCCGCTGCCATTCGCACCGCTCTTAGCCATGTTGAGAATCTCATCACCGGTGTCACCAAGGGCTACCGGTACAAGATGCGATTTGTTTATGCTCACTTTCCCATCAATGCTAGCATTACCAACTCCAACAAATCCATCGAGATCCGAAACTTTCTTGGCGAGAAGAAGGTATAACTCTTTTTCTCTTGCCCTTTTATCATTAATTGCATTTCCTGGATTTTGGGTACTGGATTCATGCTTGCTGCTGCTTTTGTATAGCTTAATTGAATGCGAAATGTTTAAGGTTTAAGGGTTAACTTTGATTTTACTTGCTGTGTTTAACTTGTTTACTTAGGAACTCCTAGCACTATGAAGTCTCATCTTCTCTCCTCCTGCTTTTATGATTTGTTAAGTATTTAAGTTAAAATCAAGAGCATGTTTTTTTTTAGAAGTAGAAAAATGTTTATCTGTTGGATTGTCTTTACTTGATTCTCTAATTCTCCATGAGGGTTGTAGCTTAGCTTCGGTGCTGAGAATCAATTAAACAACTGTCATTAACAAATTTATTATGCAGAATTATTCATCAGTATGTACATTTTTTTTTTTGAAAAATGTTTTCCAAATGTAACGATATAAGGTTCTGTTACGAAGCAGTTTGCAGCAAGCCAACAACTCAAACTACTAAATACAAGAAGAGTCCACAAACCATTTGCTGGATTTAAATAACTGAACTAGTCAATAACGTTCAATAGAAACATAAAATTATCCACTAGGAATCAGAATTGGAAGCTATACGCCATAAAATCAGTCACTACAACTTGCGACTACATGGAAAATGCTAAATAATGGGCAATTGTAAACATTGTTTGGTGAAACAACTTTTGGGTACTAGGTTGTTGAGATAGTTCTAAGAACAATTGGGAGGAGTTGGTGAGAGGGAAAAAGGTCAGAGGGTTGAGGAGTATGTGAAAGAGAGGATCTTTAGAAACATGACATCGAGTTTGATTGTTTTAGGACATAATTTACTGATTGCTTTGAATACAGTCATTTGTTTATTTTATCCATAGTTCGGCACCCTCTATTCAAAACAAGTATTTTAATATATCTGGTATATATTCCAATTAATGTTTATGAAAAATTCCATGTTTGATATGTTTTTGTTATATTTGTATGATTTGTGGATTCAATATTTCCATCTTCTTTGTGCAATAGGTTCGGAAAGTAGATATGCTTGATGGAGTATCTATTGTTCGATCTGAGAAAGTCAAGGATGAGTTAGTCTTGGATGGTAATGATATTGAGCTTGTATCTCGATCTGCTGCCTTGATTAACCAGGTATTTTCTTCACCCATGCTACATTTTGATTGGTTCTTTGTTGCAAAGCTTGCGCCTGCACAGGTGTAGTTGGTTTAATACTCACTTTTTGTTTCTTTTCTGGGTGACAGAAATGCCATGTGAAGAACAAAGATATCAGGAAGTTTCTTGATGGTATTTATGTTAGCGAAAAGGGAACCGTCGTTGAAGAAGAGTGATGAAAGAGTAGTTTTGTTCAACCATGCATTGGCGTTCGGTGATAGTTTCTTTTTATATATTTATATCAAATTCGTAGACAAAATCATGAGAGCTGGTTTTTGAAGGGACAAAATTTATCGTAAAGCATTTAGTTGGACACCAATCGTAATGGGCGATGGAGTAAATGCCAGTTTTCATTGTTTGGTTTGTTGTGGGATTTCCAGAAGACCTAATTTTGTTCCTCACTTTAGATTTAAGAATGCTGTTCATCTTTCAATTTATAGTGGAGTTATTGTTGATTTTGGATGCAGTTATTGTTCATTTAGGCCATAATTTTTTCTCCAATATTAACTTCAACTTCTGTTGATGTGAATGTTATATGTTAGGCAAACATTAGGTGGTTTTAAATCTGAATTTCCTGGGGATTTTGAT

mRNA sequence

TTTCCTCTCTTCCTCTCTTTCCCAATACTATAAATCTTCACCATTTTCCTGATTAGGGTTTTTGTTCGTTCTTGGCCGTCCCCTTCATCGTTCCCAGAGAGAGGGAGAGAGTAAGTTGCAATAGTAAAAGATGAAGACGATCCTCTCATCTGAAACCATGGATATCCCCGACGGGGTGAAGATCAAAGTGAACGCCAAAATCATCGAGGTCGAAGGGCCTAGAGGGAAGCTCGTTCGCAATTTCAAGCATTTGAATCTCGATTTCCAGTTGATCACTGACGAGGATACCGGAAAGAAGAAGCTGAAGATTGATGCATGGTTTGGCTCCAGGAAGACTTCCGCTGCCATTCGCACCGCTCTTAGCCATGTTGAGAATCTCATCACCGGTGTCACCAAGGGCTACCGGTACAAGATGCGATTTGTTTATGCTCACTTTCCCATCAATGCTAGCATTACCAACTCCAACAAATCCATCGAGATCCGAAACTTTCTTGGCGAGAAGAAGGTTCGGAAAGTAGATATGCTTGATGGAGTATCTATTGTTCGATCTGAGAAAGTCAAGGATGAGTTAGTCTTGGATGGTAATGATATTGAGCTTGTATCTCGATCTGCTGCCTTGATTAACCAGAAATGCCATGTGAAGAACAAAGATATCAGGAAGTTTCTTGATGGTATTTATGTTAGCGAAAAGGGAACCGTCGTTGAAGAAGAGTGATGAAAGAGTAGTTTTGTTCAACCATGCATTGGCGTTCGGTGATAGTTTCTTTTTATATATTTATATCAAATTCGTAGACAAAATCATGAGAGCTGGTTTTTGAAGGGACAAAATTTATCGTAAAGCATTTAGTTGGACACCAATCGTAATGGGCGATGGAGTAAATGCCAGTTTTCATTGTTTGGTTTGTTGTGGGATTTCCAGAAGACCTAATTTTGTTCCTCACTTTAGATTTAAGAATGCTGTTCATCTTTCAATTTATAGTGGAGTTATTGTTGATTTTGGATGCAGTTATTGTTCATTTAGGCCATAATTTTTTCTCCAATATTAACTTCAACTTCTGTTGATGTGAATGTTATATGTTAGGCAAACATTAGGTGGTTTTAAATCTGAATTTCCTGGGGATTTTGAT

Coding sequence (CDS)

ATGAAGACGATCCTCTCATCTGAAACCATGGATATCCCCGACGGGGTGAAGATCAAAGTGAACGCCAAAATCATCGAGGTCGAAGGGCCTAGAGGGAAGCTCGTTCGCAATTTCAAGCATTTGAATCTCGATTTCCAGTTGATCACTGACGAGGATACCGGAAAGAAGAAGCTGAAGATTGATGCATGGTTTGGCTCCAGGAAGACTTCCGCTGCCATTCGCACCGCTCTTAGCCATGTTGAGAATCTCATCACCGGTGTCACCAAGGGCTACCGGTACAAGATGCGATTTGTTTATGCTCACTTTCCCATCAATGCTAGCATTACCAACTCCAACAAATCCATCGAGATCCGAAACTTTCTTGGCGAGAAGAAGGTTCGGAAAGTAGATATGCTTGATGGAGTATCTATTGTTCGATCTGAGAAAGTCAAGGATGAGTTAGTCTTGGATGGTAATGATATTGAGCTTGTATCTCGATCTGCTGCCTTGATTAACCAGAAATGCCATGTGAAGAACAAAGATATCAGGAAGTTTCTTGATGGTATTTATGTTAGCGAAAAGGGAACCGTCGTTGAAGAAGAGTGA

Protein sequence

MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKIDAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNFLGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLDGIYVSEKGTVVEEE
Homology
BLAST of Cmc09g0259931 vs. NCBI nr
Match: XP_008437538.1 (PREDICTED: 60S ribosomal protein L9 [Cucumis melo] >ADN33776.1 60S ribosomal protein l9 [Cucumis melo subsp. melo] >KAA0042589.1 60S ribosomal protein L9 [Cucumis melo var. makuwa] >TYK05992.1 60S ribosomal protein L9 [Cucumis melo var. makuwa])

HSP 1 Score: 379.8 bits (974), Expect = 1.4e-101
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. NCBI nr
Match: XP_004145906.1 (60S ribosomal protein L9 [Cucumis sativus] >KGN49915.1 hypothetical protein Csa_000354 [Cucumis sativus])

HSP 1 Score: 375.2 bits (962), Expect = 3.5e-100
Identity = 191/194 (98.45%), Postives = 193/194 (99.48%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. NCBI nr
Match: KAG6579363.1 (60S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016849.1 60S ribosomal protein L9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375.2 bits (962), Expect = 3.5e-100
Identity = 190/194 (97.94%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKL+RNFKHLNLDFQLIT+E+TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. NCBI nr
Match: XP_022922256.1 (60S ribosomal protein L9 [Cucurbita moschata])

HSP 1 Score: 374.0 bits (959), Expect = 7.8e-100
Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKL+RNFKHLNLDFQLIT+E+TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVR+VDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRRVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. NCBI nr
Match: XP_023551562.1 (60S ribosomal protein L9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 373.6 bits (958), Expect = 1.0e-99
Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIP+GVKIKVNAKIIEVEGPRGKL+RNFKHLNLDFQLIT+E+TGKKKLKI
Sbjct: 1   MKTILSSETMDIPEGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. ExPASy Swiss-Prot
Match: P30707 (60S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 5.1e-94
Identity = 177/194 (91.24%), Postives = 185/194 (95.36%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETM+IPDGV IKVNAK+IEVEGPRGKLVR+FKHLNLDF LITDE+ GKKKLKI
Sbjct: 1   MKTILSSETMNIPDGVTIKVNAKVIEVEGPRGKLVRDFKHLNLDFDLITDEN-GKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKG+RYKMRFVYA FPINASITN NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGFRYKMRFVYADFPINASITNDNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVD+LDGVSI+RSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVDLLDGVSIIRSEKVKDEVVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKG VV EE
Sbjct: 181 GIYVSEKGAVVVEE 193

BLAST of Cmc09g0259931 vs. ExPASy Swiss-Prot
Match: P49209 (60S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3)

HSP 1 Score: 334.7 bits (857), Expect = 6.8e-91
Identity = 167/194 (86.08%), Postives = 182/194 (93.81%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D +TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+IVRSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEK  +VEEE
Sbjct: 181 GIYVSEKSKIVEEE 194

BLAST of Cmc09g0259931 vs. ExPASy Swiss-Prot
Match: Q9SZX9 (60S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.9e-89
Identity = 163/194 (84.02%), Postives = 180/194 (92.78%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGV IKVNAK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++LKI
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           D+WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI  +NKSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV IVRSEKVKDE++L+GNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKG +  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

BLAST of Cmc09g0259931 vs. ExPASy Swiss-Prot
Match: P49210 (60S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 SV=3)

HSP 1 Score: 320.9 bits (821), Expect = 1.0e-86
Identity = 158/193 (81.87%), Postives = 180/193 (93.26%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTIL+SETM+IP+GV ++V AK++ VEGPRGKL RNFKHLNLDFQL+     G +KL++
Sbjct: 1   MKTILASETMEIPEGVTVQVAAKVVTVEGPRGKLTRNFKHLNLDFQLL----EGGRKLQV 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFG+R+T AAIRTA+SHV+NLITGVTKGYRYKMRFVYAHFPINASITNSN +IEIRNF
Sbjct: 61  DAWFGTRRTMAAIRTAISHVQNLITGVTKGYRYKMRFVYAHFPINASITNSNTAIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDML+GV+I+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLEGVTILRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEE 194
           GIYVS+KGT+ E+
Sbjct: 181 GIYVSDKGTITED 189

BLAST of Cmc09g0259931 vs. ExPASy Swiss-Prot
Match: Q90YW0 (60S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 2.4e-59
Identity = 117/194 (60.31%), Postives = 145/194 (74.74%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILS++T+DIPD V + +  + + V+GPRG L R F H+NL+ +L+  +   +KKL++
Sbjct: 1   MKTILSTQTVDIPDNVDVTLKGRTVSVKGPRGVLRREFNHINLELRLLGKK---QKKLRV 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           D W+G+RK  A +RT  SHV+N+I GVT G+RYKMR VYAHFPIN  I  +   +EIRNF
Sbjct: 61  DKWWGNRKELATVRTICSHVQNMIKGVTLGFRYKMRSVYAHFPINVVIQETGSLVEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEK +R+V M  GV+   S   KDELVL+GNDIELVS SAALI Q   VKNKDIRKFLD
Sbjct: 121 LGEKYIRRVRMRPGVNCALSAAQKDELVLEGNDIELVSNSAALIQQATTVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVE E
Sbjct: 181 GIYVSEKGTVVEPE 191

BLAST of Cmc09g0259931 vs. ExPASy TrEMBL
Match: A0A5D3C437 (60S ribosomal protein L9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00890 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.8e-102
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. ExPASy TrEMBL
Match: E5GBD5 (60S ribosomal protein l9 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.8e-102
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. ExPASy TrEMBL
Match: A0A1S3AUU6 (60S ribosomal protein L9 OS=Cucumis melo OX=3656 GN=LOC103482923 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.8e-102
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. ExPASy TrEMBL
Match: A0A0A0KJL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139920 PE=3 SV=1)

HSP 1 Score: 375.2 bits (962), Expect = 1.7e-100
Identity = 191/194 (98.45%), Postives = 193/194 (99.48%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDE TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEATGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKVDMLDGVSI+RSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRKVDMLDGVSIIRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. ExPASy TrEMBL
Match: A0A6J1E3M6 (60S ribosomal protein L9 OS=Cucurbita moschata OX=3662 GN=LOC111430293 PE=3 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.8e-100
Identity = 189/194 (97.42%), Postives = 194/194 (100.00%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKL+RNFKHLNLDFQLIT+E+TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLIRNFKHLNLDFQLITEEETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITN+NKSIEIRNF
Sbjct: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNTNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVR+VDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD
Sbjct: 121 LGEKKVRRVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKGTVVEEE
Sbjct: 181 GIYVSEKGTVVEEE 194

BLAST of Cmc09g0259931 vs. TAIR 10
Match: AT1G33120.1 (Ribosomal protein L6 family )

HSP 1 Score: 334.7 bits (857), Expect = 4.9e-92
Identity = 167/194 (86.08%), Postives = 182/194 (93.81%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D +TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+IVRSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEK  +VEEE
Sbjct: 181 GIYVSEKSKIVEEE 194

BLAST of Cmc09g0259931 vs. TAIR 10
Match: AT1G33140.1 (Ribosomal protein L6 family )

HSP 1 Score: 334.7 bits (857), Expect = 4.9e-92
Identity = 167/194 (86.08%), Postives = 182/194 (93.81%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPD V IKV+AK+IEVEGPRGKLVR+FKHLNLDFQLI D +TGKKKLKI
Sbjct: 1   MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           D+WFG+RKTSA+IRTALSHV+NLI+GVT+G+RYKMRFVYAHFPINASI    KSIEIRNF
Sbjct: 61  DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV+IVRSEKVKDE+VLDGNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEK  +VEEE
Sbjct: 181 GIYVSEKSKIVEEE 194

BLAST of Cmc09g0259931 vs. TAIR 10
Match: AT4G10450.1 (Ribosomal protein L6 family )

HSP 1 Score: 329.3 bits (843), Expect = 2.0e-90
Identity = 163/194 (84.02%), Postives = 180/194 (92.78%), Query Frame = 0

Query: 1   MKTILSSETMDIPDGVKIKVNAKIIEVEGPRGKLVRNFKHLNLDFQLITDEDTGKKKLKI 60
           MKTILSSETMDIPDGV IKVNAK+IEVEGPRGKL R+FKHLNLDFQLI D+ TGK++LKI
Sbjct: 1   MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60

Query: 61  DAWFGSRKTSAAIRTALSHVENLITGVTKGYRYKMRFVYAHFPINASITNSNKSIEIRNF 120
           D+WFGSRKTSA+IRTALSHV+NLI GVT+G+ Y+MRFVYAHFPINASI  +NKSIEIRNF
Sbjct: 61  DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120

Query: 121 LGEKKVRKVDMLDGVSIVRSEKVKDELVLDGNDIELVSRSAALINQKCHVKNKDIRKFLD 180
           LGEKKVRKV+MLDGV IVRSEKVKDE++L+GNDIELVSRS ALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180

Query: 181 GIYVSEKGTVVEEE 195
           GIYVSEKG +  EE
Sbjct: 181 GIYVSEKGKIAVEE 194

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008437538.11.4e-101100.00PREDICTED: 60S ribosomal protein L9 [Cucumis melo] >ADN33776.1 60S ribosomal pro... [more]
XP_004145906.13.5e-10098.4560S ribosomal protein L9 [Cucumis sativus] >KGN49915.1 hypothetical protein Csa_... [more]
KAG6579363.13.5e-10097.9460S ribosomal protein L9, partial [Cucurbita argyrosperma subsp. sororia] >KAG70... [more]
XP_022922256.17.8e-10097.4260S ribosomal protein L9 [Cucurbita moschata][more]
XP_023551562.11.0e-9997.4260S ribosomal protein L9-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
P307075.1e-9491.2460S ribosomal protein L9 OS=Pisum sativum OX=3888 GN=RPL9 PE=2 SV=1[more]
P492096.8e-9186.0860S ribosomal protein L9-1 OS=Arabidopsis thaliana OX=3702 GN=RPL9B PE=1 SV=3[more]
Q9SZX92.9e-8984.0260S ribosomal protein L9-2 OS=Arabidopsis thaliana OX=3702 GN=RPL9D PE=2 SV=1[more]
P492101.0e-8681.8760S ribosomal protein L9 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL9 PE=2 S... [more]
Q90YW02.4e-5960.3160S ribosomal protein L9 OS=Ictalurus punctatus OX=7998 GN=rpl9 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A5D3C4376.8e-102100.0060S ribosomal protein L9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
E5GBD56.8e-102100.0060S ribosomal protein l9 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1[more]
A0A1S3AUU66.8e-102100.0060S ribosomal protein L9 OS=Cucumis melo OX=3656 GN=LOC103482923 PE=3 SV=1[more]
A0A0A0KJL81.7e-10098.45Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G139920 PE=3 SV=1[more]
A0A6J1E3M63.8e-10097.4260S ribosomal protein L9 OS=Cucurbita moschata OX=3662 GN=LOC111430293 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT1G33120.14.9e-9286.08Ribosomal protein L6 family [more]
AT1G33140.14.9e-9286.08Ribosomal protein L6 family [more]
AT4G10450.12.0e-9084.02Ribosomal protein L6 family [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000702Ribosomal protein L6PIRSFPIRSF002162RPL6p_RPL6a_RPL9e_RPL9ocoord: 1..190
e-value: 4.7E-31
score: 105.6
IPR000702Ribosomal protein L6PANTHERPTHR1165560S/50S RIBOSOMAL PROTEIN L6/L9coord: 1..194
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 1..90
e-value: 6.9E-30
score: 105.4
IPR036789Ribosomal protein L6, alpha-beta domain superfamilyGENE3D3.90.930.12coord: 91..194
e-value: 1.4E-52
score: 178.1
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 91..187
IPR036789Ribosomal protein L6, alpha-beta domain superfamilySUPERFAMILY56053Ribosomal protein L6coord: 1..90
IPR020040Ribosomal protein L6, alpha-beta domainPFAMPF00347Ribosomal_L6coord: 102..181
e-value: 2.7E-12
score: 47.2
coord: 12..90
e-value: 2.2E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR11655:SF4060S RIBOSOMAL PROTEIN L9-LIKEcoord: 1..194
IPR002359Ribosomal protein L6, conserved site-2PROSITEPS00700RIBOSOMAL_L6_2coord: 166..187

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0259931.1Cmc09g0259931.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0002181 cytoplasmic translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0003735 structural constituent of ribosome