Cmc09g0259311 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0259311
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr09: 23088183 .. 23089327 (+)
RNA-Seq ExpressionCmc09g0259311
SyntenyCmc09g0259311
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGAGAATGGTGATGGTCTTTAAGTTGGAAGTAGATTAGGATAGGAATGGACGGTTAACATCTTTTTAACCACAACGCTACTTCCCTTATTCAACACGGCTTTAAAGAACAAGTCCTCTCTCACTATACTACGCCAACCAACTAAAATTATTCATAAGAAACTTCTAGGAATCTAAAAAGGAAATTGGAAAATCCCTCCCCCCTATAAATTCCCTCTCTCATTCCCCCCAAATTTGCATCAATTTCCTCACCAACAACCTCTCTCAATTCAACAATTTCAATCAACATGAATTCCATGTTCAGTTTATTCGACGCCTTCGCCGCCGAATTCCTCCTCGGCAATAATTTCGTTAGAGCTTCTTCCTCTATTCCTTCCTTCACTCCCAACAACAACAACAACGCCGCCTCTTCCGCCGTTCCGAAGCCGCTGCCTAGTAAGAAGAAAGAAGAACCGAAACCCAAGAATTCGTCGGTGAAGCCGAGATTTGCTCTGGAGTTGGATGGTCTCAATTGCTTTGAAACTCTCGTCCCCAATTGAGGTTTTCTCACGTTGAAATCAAGATTCAATTCAAACTCATATATTTTTTTTCTTCATTCATTCTTTCAGTTTTTAGGGGTTAAAAATTAGGGGATACGAACGAAATTTGGGGAATTGTAGTATATAATACAGAGTGTTCTTCTTTTGGATGGAATTAAATGATCAGATTCTGTTCTACTCTGATACTATATTGGTTGATTCATTGCTGTTGGTGGTTAATTGTTTTATATTTTTCAAGATTTTAGAGTATTGTGAATGATCTGGATGGATAATCTTAGAGATTTTTTTTTCTTTTTGTTAGAATTGGAAATTGTGAGAACTCTTGTAATTGACAAAAGAATAATTGTAAATTATATTAATGGGAATTGTTGGAACCACGGAAAGAATATAAAATAATAAGTTTGGGAAACATAAAAAGAAAGAATCAGTGGGGTGTCGTGGCTCACAAATTAAGGAAAAGAGAAGAAAAGAAAAGTCATCAAACAAAATATCAAATGTGTTCTTAACTCGTTCACCAAAATTATATGTAAATATATGTGTTTCCCTCCGATCGGATTTTGGCTCCAAATGTCGTAGTCGAACGGTTGATGAAGGGTTTGACCATCT

mRNA sequence

TTTGAGAATGGTGATGGTCTTTAAGTTGGAAGTAGATTAGGATAGGAATGGACGGTTAACATCTTTTTAACCACAACGCTACTTCCCTTATTCAACACGGCTTTAAAGAACAAGTCCTCTCTCACTATACTACGCCAACCAACTAAAATTATTCATAAGAAACTTCTAGGAATCTAAAAAGGAAATTGGAAAATCCCTCCCCCCTATAAATTCCCTCTCTCATTCCCCCCAAATTTGCATCAATTTCCTCACCAACAACCTCTCTCAATTCAACAATTTCAATCAACATGAATTCCATGTTCAGTTTATTCGACGCCTTCGCCGCCGAATTCCTCCTCGGCAATAATTTCGTTAGAGCTTCTTCCTCTATTCCTTCCTTCACTCCCAACAACAACAACAACGCCGCCTCTTCCGCCGTTCCGAAGCCGCTGCCTAGTAAGAAGAAAGAAGAACCGAAACCCAAGAATTCGTCGGTGAAGCCGAGATTTGCTCTGGAGTTGGATGGTCTCAATTGCTTTGAAACTCTCGTCCCCAATTGAGGTTTTCTCACGTTGAAATCAAGATTCAATTCAAACTCATATATTTTTTTTCTTCATTCATTCTTTCAGTTTTTAGGGGTTAAAAATTAGGGGATACGAACGAAATTTGGGGAATTGTAGTATATAATACAGAGTGTTCTTCTTTTGGATGGAATTAAATGATCAGATTCTGTTCTACTCTGATACTATATTGGTTGATTCATTGCTGTTGGTGGTTAATTGTTTTATATTTTTCAAGATTTTAGAGTATTGTGAATGATCTGGATGGATAATCTTAGAGATTTTTTTTTCTTTTTGTTAGAATTGGAAATTGTGAGAACTCTTGTAATTGACAAAAGAATAATTGTAAATTATATTAATGGGAATTGTTGGAACCACGGAAAGAATATAAAATAATAAGTTTGGGAAACATAAAAAGAAAGAATCAGTGGGGTGTCGTGGCTCACAAATTAAGGAAAAGAGAAGAAAAGAAAAGTCATCAAACAAAATATCAAATGTGTTCTTAACTCGTTCACCAAAATTATATGTAAATATATGTGTTTCCCTCCGATCGGATTTTGGCTCCAAATGTCGTAGTCGAACGGTTGATGAAGGGTTTGACCATCT

Coding sequence (CDS)

ATGAATTCCATGTTCAGTTTATTCGACGCCTTCGCCGCCGAATTCCTCCTCGGCAATAATTTCGTTAGAGCTTCTTCCTCTATTCCTTCCTTCACTCCCAACAACAACAACAACGCCGCCTCTTCCGCCGTTCCGAAGCCGCTGCCTAGTAAGAAGAAAGAAGAACCGAAACCCAAGAATTCGTCGGTGAAGCCGAGATTTGCTCTGGAGTTGGATGGTCTCAATTGCTTTGAAACTCTCGTCCCCAATTGA

Protein sequence

MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVPKPLPSKKKEEPKPKNSSVKPRFALELDGLNCFETLVPN
Homology
BLAST of Cmc09g0259311 vs. NCBI nr
Match: KAA0042638.1 (uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK06039.1 uncharacterized protein E5676_scaffold376G001400 [Cucumis melo var. makuwa])

HSP 1 Score: 157.1 bits (396), Expect = 6.4e-35
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTP-NNNNNAASSAVPKPLPSKKKEEPKPK 60
          MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTP NNNNNAASSAVPKPLPSKKKEEPKPK
Sbjct: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNNAASSAVPKPLPSKKKEEPKPK 60

Query: 61 NSSVKPRFALELDGLNCFETLVPN 84
          NSSVKPRFALELDGLNCFETLVPN
Sbjct: 61 NSSVKPRFALELDGLNCFETLVPN 84

BLAST of Cmc09g0259311 vs. NCBI nr
Match: XP_011654674.1 (uncharacterized protein LOC105435432 [Cucumis sativus])

HSP 1 Score: 136.0 bits (341), Expect = 1.5e-28
Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVPKPLPSKKKEEPKPKN 60
          MNSMFSLFDAFAAEFLLG NFVRASSS+PSFTPNNNN  AS AVPKPLPSKK+EEPK KN
Sbjct: 1  MNSMFSLFDAFAAEFLLG-NFVRASSSVPSFTPNNNN--ASPAVPKPLPSKKEEEPKSKN 60

Query: 61 SSVKPRFALELDGLNCFETLVPN 84
          S +KPRFALELDGLNCFETLVPN
Sbjct: 61 SLMKPRFALELDGLNCFETLVPN 80

BLAST of Cmc09g0259311 vs. NCBI nr
Match: KAE8647826.1 (hypothetical protein Csa_000535 [Cucumis sativus])

HSP 1 Score: 103.6 bits (257), Expect = 8.4e-19
Identity = 59/73 (80.82%), Postives = 63/73 (86.30%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVPKPLPSKKKEEPKPKN 60
          MNSMFSLFDAFAAEFLLG NFVRASSS+PSFTPNNNN  AS AVPKPLPSKK+EEPK KN
Sbjct: 1  MNSMFSLFDAFAAEFLLG-NFVRASSSVPSFTPNNNN--ASPAVPKPLPSKKEEEPKSKN 60

Query: 61 SSVKPRFALELDG 74
          S +KP    +LDG
Sbjct: 61 SLMKPSIVNDLDG 70

BLAST of Cmc09g0259311 vs. NCBI nr
Match: XP_023522684.1 (uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 100.9 bits (250), Expect = 5.4e-18
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVP-KPLPSKKKEE---P 60
          MNSMFS FDAFAAE L+G  FV AS+S+PSFTPN     ++S+ P K +P KK E     
Sbjct: 1  MNSMFSFFDAFAAEILIG-KFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKDEANAVA 60

Query: 61 KPKNSSVKPRFALELDGLNCFETLVPN 84
          K KNSS+KPRFALELDGLNCFETLVPN
Sbjct: 61 KSKNSSMKPRFALELDGLNCFETLVPN 86

BLAST of Cmc09g0259311 vs. NCBI nr
Match: KAG6579594.1 (hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 100.1 bits (248), Expect = 9.3e-18
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0

Query: 1   MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVP-KPLPSKKKEE---P 60
           MNSMFS FDAFAAE LLG  FV AS+S+PSFTPN     ++S+ P K +P KK+E     
Sbjct: 81  MNSMFSFFDAFAAEILLG-KFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKEEANAVA 140

Query: 61  KPKNSSVKPRFALELDGLNCFETLVPN 84
           K KNS +KPRFALELDGLNCFETLVPN
Sbjct: 141 KSKNSLMKPRFALELDGLNCFETLVPN 166

BLAST of Cmc09g0259311 vs. ExPASy TrEMBL
Match: A0A5D3C6N3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G001400 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.1e-35
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTP-NNNNNAASSAVPKPLPSKKKEEPKPK 60
          MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTP NNNNNAASSAVPKPLPSKKKEEPKPK
Sbjct: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNNAASSAVPKPLPSKKKEEPKPK 60

Query: 61 NSSVKPRFALELDGLNCFETLVPN 84
          NSSVKPRFALELDGLNCFETLVPN
Sbjct: 61 NSSVKPRFALELDGLNCFETLVPN 84

BLAST of Cmc09g0259311 vs. ExPASy TrEMBL
Match: A0A0A0KJT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.4e-29
Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVPKPLPSKKKEEPKPKN 60
          MNSMFSLFDAFAAEFLLG NFVRASSS+PSFTPNNNN  AS AVPKPLPSKK+EEPK KN
Sbjct: 1  MNSMFSLFDAFAAEFLLG-NFVRASSSVPSFTPNNNN--ASPAVPKPLPSKKEEEPKSKN 60

Query: 61 SSVKPRFALELDGLNCFETLVPN 84
          S +KPRFALELDGLNCFETLVPN
Sbjct: 61 SLMKPRFALELDGLNCFETLVPN 80

BLAST of Cmc09g0259311 vs. ExPASy TrEMBL
Match: A0A6J1EM23 (uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC111435766 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 4.5e-18
Identity = 58/87 (66.67%), Postives = 66/87 (75.86%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVP-KPLPSKKKEE---P 60
          MNSMFS FDAFAAE LLG  FV AS+S+PSFTPN     ++S+ P K +P KK+E     
Sbjct: 1  MNSMFSFFDAFAAEILLG-KFVTASTSVPSFTPNTGGGGSASSAPVKSMPGKKEEANAVA 60

Query: 61 KPKNSSVKPRFALELDGLNCFETLVPN 84
          K KNS +KPRFALELDGLNCFETLVPN
Sbjct: 61 KSKNSLMKPRFALELDGLNCFETLVPN 86

BLAST of Cmc09g0259311 vs. ExPASy TrEMBL
Match: A0A6J1E0L6 (uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026066 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.5e-08
Identity = 44/83 (53.01%), Postives = 51/83 (61.45%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVPKPLPSKKKEEPKPKN 60
          MNSMFSLFDAFAAE L+   F RASS   SF PNN +  +  + P        E+PK   
Sbjct: 1  MNSMFSLFDAFAAELLMAKTF-RASS---SFAPNNGSGGSVKSPPSNAAPDNLEQPKSNK 60

Query: 61 SSV--KPRFALELDGLNCFETLV 82
          +S+   PR A E DGLNCFETLV
Sbjct: 61 NSLLRPPRLAPEFDGLNCFETLV 79

BLAST of Cmc09g0259311 vs. ExPASy TrEMBL
Match: A0A5C7H1W0 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_023293 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.9e-06
Identity = 47/88 (53.41%), Postives = 52/88 (59.09%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRAS-------SSIPSFTPNNNNNAASSAVPKPLPSKKK 60
          MNS+FS FDAF+AE LLG   VR S       SS  +   NNNNN  S    K +   KK
Sbjct: 1  MNSIFSSFDAFSAE-LLGQK-VRVSFAPTTTCSSTNATQKNNNNNLQSQESTKDVAINKK 60

Query: 61 EEPKPKNSSVKPRFALELDGLNCFETLV 82
                +SS KPRFA ELDGLNCFETLV
Sbjct: 61 TS---TSSSSKPRFAPELDGLNCFETLV 83

BLAST of Cmc09g0259311 vs. TAIR 10
Match: AT1G32920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to wounding; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32928.1); Has 42 Blast hits to 42 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 7.8e-07
Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVPKPLPSKKKEEPKPKN 60
          MNSMFS FDA  AE ++G N + +     SFT       A++A  KP  + + +  +  N
Sbjct: 1  MNSMFSAFDALFAE-VMGKNLMAS-----SFT-------ATTATTKPAAAPQTQTQEKAN 60

Query: 61 SSVK--------PRFALELDGLNCFETLV 82
          +S K        PRFALELDGL+CFET+V
Sbjct: 61 ASSKKIGLVQKIPRFALELDGLHCFETIV 76

BLAST of Cmc09g0259311 vs. TAIR 10
Match: AT1G32928.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G32920.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 50.4 bits (119), Expect = 7.8e-07
Identity = 37/84 (44.05%), Postives = 49/84 (58.33%), Query Frame = 0

Query: 1  MNSMFSLFDAFAAEFLLGNNFVRASSSIPSFTPNNNNNAASSAVPKPLPSKKKEEPKPKN 60
          MNSMFS FDA  AE +     V A+S +     N+ ++++S        S KK+E   KN
Sbjct: 1  MNSMFSAFDAMCAEIM--GKKVTAASYVYRSERNSASSSSSVGGQNASLSLKKDEKASKN 60

Query: 61 SSV---KPRFALELDGLNCFETLV 82
            +    PRFALELDGL+CFET+V
Sbjct: 61 MDLPTKTPRFALELDGLHCFETIV 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0042638.16.4e-3598.81uncharacterized protein E6C27_scaffold44G001360 [Cucumis melo var. makuwa] >TYK0... [more]
XP_011654674.11.5e-2889.16uncharacterized protein LOC105435432 [Cucumis sativus][more]
KAE8647826.18.4e-1980.82hypothetical protein Csa_000535 [Cucumis sativus][more]
XP_023522684.15.4e-1866.67uncharacterized protein LOC111786686 [Cucurbita pepo subsp. pepo][more]
KAG6579594.19.3e-1866.67hypothetical protein SDJN03_24042, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3C6N33.1e-3598.81Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KJT87.4e-2989.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G146930 PE=4 SV=1[more]
A0A6J1EM234.5e-1866.67uncharacterized protein LOC111435766 OS=Cucurbita moschata OX=3662 GN=LOC1114357... [more]
A0A6J1E0L65.5e-0853.01uncharacterized protein LOC111026066 OS=Momordica charantia OX=3673 GN=LOC111026... [more]
A0A5C7H1W03.9e-0653.41Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_023293 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G32920.17.8e-0742.70unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
AT1G32928.17.8e-0744.05unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 28..66
NoneNo IPR availablePANTHERPTHR33641:SF2BNAA08G06880D PROTEINcoord: 1..83
NoneNo IPR availablePANTHERPTHR33641OS06G0133500 PROTEINcoord: 1..83

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0259311.1Cmc09g0259311.1mRNA