Cmc09g0258351 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0258351
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Late embryogenesis abundant protein
Location	CMiso1.1chr09: 22500743 .. 22501948 (+)
RNA-Seq Expression	Cmc09g0258351
Synteny	Cmc09g0258351

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCGGCGCATTCCAAAACTGACCTCTCCGCTTCTCACGAATTTCCCAATTTCCCCCTTCACTCACTAACCGCTTTTTTCCACTTTCCCCTATAAATTCTCTCTTTCTCTCTCTCCCTTTCTCTCTAAAAAAACCAAAAACCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTCTCCTCCGCCATGGGAGAAGACAGCCAGAGCTTTCCATTAGCCCACTACCAAGCTCACCACAAAACCGACGAAGAACAACAACTCGCTACCTTCAAAACTCTCCATAAAGAACGATCCAACAAATGCTTCATCTATATCTTCTCCACTTTCGTCTTCCTCAGCGTCGCTCTTCTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTTCCATCAACCTCTCTGCCGTTTCAATCCCTAAATTCTCCCTCTCTAACGCTAATAATTCCTCTTCTCCCAATTCTCTCGATCTCTCCTTCTCCGCTGTATTCACCGTCGATAATTCCAACTTCGGTCCTTTCAATTTCGACAACGGCACCGTTGGTCTTGTGTATGGTGGAATGATTTTCGGGGAAAGGAGTACTGGCGGTGGGAGAGCCGAGGCTAAGGGGAGTAAGAGGATGAATGTTACTGTGGAAGGTTCGGCGAAGAATGTCAGTGGTAGTAATGGGATTTTGAGTTTGAGTAGCTTTGTGAAATTGAGAGGGAGAGTTCGTTTGATTCATGTGTTTAGACGGAGAGTTTCGTCGGAAATTAGTTGTTCGATGAATTTGGATTTGAATACTCATCAAATTCAACATAATTGGGTTTGTGAGTAGTGATCATCTGAATCGAAATCCATCAACCCCATAGACGAACCCTAATTAGTTCATTTTTTTTATTTTTTATTTTTGAAATTAGTTTATTATTTTACCTTTTCGTTTTCCTTTTACAATTTTGTTGAGTTTCTTTCTTTTTCTGAATACGACGATGTAAACATACATATACATATACATATACATATCTTTGCCTAATTCTTTCCTCAATATATAATCATTCACTCTTTCTTTTCTTAGCAAAAATCAAACTTGCTTTAAGTCGAGCTAAAATTAGCTTTCAACATTTTGTTAATTTAAATATTTCATATTGGCTATAAATGTTATATTGAATATTCGATAACTTATGAACTATAAACAGAAGGAATTGGAGAGTTTCTTACTTGTTTGCT

mRNA sequence

GCCGGCGCATTCCAAAACTGACCTCTCCGCTTCTCACGAATTTCCCAATTTCCCCCTTCACTCACTAACCGCTTTTTTCCACTTTCCCCTATAAATTCTCTCTTTCTCTCTCTCCCTTTCTCTCTAAAAAAACCAAAAACCCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTCTCTCTCCTCCGCCATGGGAGAAGACAGCCAGAGCTTTCCATTAGCCCACTACCAAGCTCACCACAAAACCGACGAAGAACAACAACTCGCTACCTTCAAAACTCTCCATAAAGAACGATCCAACAAATGCTTCATCTATATCTTCTCCACTTTCGTCTTCCTCAGCGTCGCTCTTCTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTTCCATCAACCTCTCTGCCGTTTCAATCCCTAAATTCTCCCTCTCTAACGCTAATAATTCCTCTTCTCCCAATTCTCTCGATCTCTCCTTCTCCGCTGTATTCACCGTCGATAATTCCAACTTCGGTCCTTTCAATTTCGACAACGGCACCGTTGGTCTTGTGTATGGTGGAATGATTTTCGGGGAAAGGAGTACTGGCGGTGGGAGAGCCGAGGCTAAGGGGAGTAAGAGGATGAATGTTACTGTGGAAGGTTCGGCGAAGAATGTCAGTGGTAGTAATGGGATTTTGAGTTTGAGTAGCTTTGTGAAATTGAGAGGGAGAGTTCGTTTGATTCATGTGTTTAGACGGAGAGTTTCGTCGGAAATTAGTTGTTCGATGAATTTGGATTTGAATACTCATCAAATTCAACATAATTGGGTTTGTGAGTAGTGATCATCTGAATCGAAATCCATCAACCCCATAGACGAACCCTAATTAGTTCATTTTTTTTATTTTTTATTTTTGAAATTAGTTTATTATTTTACCTTTTCGTTTTCCTTTTACAATTTTGTTGAGTTTCTTTCTTTTTCTGAATACGACGATGTAAACATACATATACATATACATATACATATCTTTGCCTAATTCTTTCCTCAATATATAATCATTCACTCTTTCTTTTCTTAGCAAAAATCAAACTTGCTTTAAGTCGAGCTAAAATTAGCTTTCAACATTTTGTTAATTTAAATATTTCATATTGGCTATAAATGTTATATTGAATATTCGATAACTTATGAACTATAAACAGAAGGAATTGGAGAGTTTCTTACTTGTTTGCT

Coding sequence (CDS)

ATGGGAGAAGACAGCCAGAGCTTTCCATTAGCCCACTACCAAGCTCACCACAAAACCGACGAAGAACAACAACTCGCTACCTTCAAAACTCTCCATAAAGAACGATCCAACAAATGCTTCATCTATATCTTCTCCACTTTCGTCTTCCTCAGCGTCGCTCTTCTAATCTTCGCTCTCATCGTCCTCCGCGTCAATTCCCCTTCCATCAACCTCTCTGCCGTTTCAATCCCTAAATTCTCCCTCTCTAACGCTAATAATTCCTCTTCTCCCAATTCTCTCGATCTCTCCTTCTCCGCTGTATTCACCGTCGATAATTCCAACTTCGGTCCTTTCAATTTCGACAACGGCACCGTTGGTCTTGTGTATGGTGGAATGATTTTCGGGGAAAGGAGTACTGGCGGTGGGAGAGCCGAGGCTAAGGGGAGTAAGAGGATGAATGTTACTGTGGAAGGTTCGGCGAAGAATGTCAGTGGTAGTAATGGGATTTTGAGTTTGAGTAGCTTTGTGAAATTGAGAGGGAGAGTTCGTTTGATTCATGTGTTTAGACGGAGAGTTTCGTCGGAAATTAGTTGTTCGATGAATTTGGATTTGAATACTCATCAAATTCAACATAATTGGGTTTGTGAGTAG

Protein sequence

MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE

Homology

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BLAST of Cmc09g0258351 vs. NCBI nr
Match: XP_008437349.1 (PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL
Sbjct: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180
           VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

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BLAST of Cmc09g0258351 vs. NCBI nr
Match: KAA0042716.1 (late embryogenesis abundant protein [Cucumis melo var. makuwa])

HSP 1 Score: 393.7 bits (1010), Expect = 1.0e-105
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVF VDNSNFGPFNFDNGTVGL
Sbjct: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180
           VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Cmc09g0258351 vs. NCBI nr
Match: XP_004143966.1 (late embryogenesis abundant protein At1g64065 [Cucumis sativus])

HSP 1 Score: 360.5 bits (924), Expect = 9.6e-96
Identity = 190/209 (90.91%), Postives = 199/209 (95.22%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHK +EEQQLATFK L KERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSPSI+LS++S P+ SLSN  NSSSPNSL+LSF+A FTVDNSNFGPFNFDNGTVGL
Sbjct: 61  VLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180
           VYGGMIFGERSTGGGRA AKGSKRMNVTVEGSAKNVSGSNGIL+ SSFVKLRGRVRLIH+
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Cmc09g0258351 vs. NCBI nr
Match: KAE8647845.1 (hypothetical protein Csa_000600 [Cucumis sativus])

HSP 1 Score: 354.0 bits (907), Expect = 9.0e-94
Identity = 188/209 (89.95%), Postives = 197/209 (94.26%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHK +EEQQLATFK L KERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSPSI+LS++S P+ SLSN  NSSSPNSL+LSF+A FTVDNSNFGPFNFDNGTVGL
Sbjct: 61  VLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180
           VYGGMIFGERSTGGGRA AKGSKRMNVTVEGSAKNVSGSNGIL+ SSFVKLRGRVRLIH+
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNW  E
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWRLE 209

[Close]

BLAST of Cmc09g0258351 vs. NCBI nr
Match: XP_038875090.1 (late embryogenesis abundant protein At1g64065 [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 5.8e-85
Identity = 175/212 (82.55%), Postives = 194/212 (91.51%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           M EDSQSFPLAHYQAHHK+DEEQQLATFKTL KERSNKCFIY+FSTFVFLSVA+LIFALI
Sbjct: 1   MVEDSQSFPLAHYQAHHKSDEEQQLATFKTLRKERSNKCFIYVFSTFVFLSVAVLIFALI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSPSI LS+VSIPKFS++NA NSSSP SL+L+  A FTVDNSNFGPFNFDNGTVGL
Sbjct: 61  VLRVNSPSIQLSSVSIPKFSITNA-NSSSP-SLNLTMIAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSN---GILSLSSFVKLRGRVRL 180
           +YGG I GE+STG GRAEAKGSKRMNVT+E SAKN+S  +   GIL+L+SFVKLRGRVRL
Sbjct: 121 MYGGAIVGEKSTGAGRAEAKGSKRMNVTMEASAKNISSDSNNLGILNLNSFVKLRGRVRL 180

Query: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           IH+FRRR SSEI+CSMNLD+NTHQIQ+NWVCE
Sbjct: 181 IHIFRRRTSSEITCSMNLDMNTHQIQYNWVCE 210

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BLAST of Cmc09g0258351 vs. ExPASy Swiss-Prot
Match: Q6DST1 (Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN=At1g64065 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.1e-08
Identity = 66/217 (30.41%), Postives = 110/217 (50.69%), Query Frame = 0


Query: 4   DSQSFPLAHYQAHHKTDEEQQ-LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALIVL 63
           D     LA  + + ++DEEQ     ++   +E   KC +Y  +  V +    LI + I L
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGPRIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIFL 62

Query: 64  RVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGLVY 123
           R++ P I   ++S     L +  NS++P   + +  +  ++ NSNFG F F++ T+ +VY
Sbjct: 63  RISKPEIETRSISTR--DLRSGGNSTNP-YFNATLVSDISIRNSNFGAFEFEDSTLRVVY 122

Query: 124 GGM-IFGERSTGGGRAEAKGSKRM-NVTVE-GSAKNVSGSN-------GILSLSSFVKLR 183
               + GE    G R EA  + R+  V VE GS + +   +       G L L S  ++R
Sbjct: 123 ADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLGFLELRSVAEVR 182

Query: 184 GRVRLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           GR++++   R +V S +SC+M L+L    IQ N +CE
Sbjct: 183 GRIKVLGRKRWKV-SVMSCTMRLNLTGRFIQ-NLLCE 214

[Close]

BLAST of Cmc09g0258351 vs. ExPASy TrEMBL
Match: A0A1S3ATY3 (late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC103482793 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.9e-107
Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL
Sbjct: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180
           VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Cmc09g0258351 vs. ExPASy TrEMBL
Match: A0A5A7TL68 (Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002140 PE=4 SV=1)

HSP 1 Score: 393.7 bits (1010), Expect = 4.9e-106
Identity = 208/209 (99.52%), Postives = 208/209 (99.52%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVF VDNSNFGPFNFDNGTVGL
Sbjct: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFIVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180
           VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV
Sbjct: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Cmc09g0258351 vs. ExPASy TrEMBL
Match: A0A0A0KQT7 (LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 4.6e-96
Identity = 190/209 (90.91%), Postives = 199/209 (95.22%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGEDSQSFPLAHYQAHHK +EEQQLATFK L KERSNKCFIYIFSTFVFLSVALLIFALI
Sbjct: 1   MGEDSQSFPLAHYQAHHKPNEEQQLATFKILRKERSNKCFIYIFSTFVFLSVALLIFALI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSPSI+LS++S P+ SLSN  NSSSPNSL+LSF+A FTVDNSNFGPFNFDNGTVGL
Sbjct: 61  VLRVNSPSISLSSISNPRVSLSNNTNSSSPNSLNLSFNAEFTVDNSNFGPFNFDNGTVGL 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVSGSNGILSLSSFVKLRGRVRLIHV 180
           VYGGMIFGERSTGGGRA AKGSKRMNVTVEGSAKNVSGSNGIL+ SSFVKLRGRVRLIH+
Sbjct: 121 VYGGMIFGERSTGGGRAGAKGSKRMNVTVEGSAKNVSGSNGILNFSSFVKLRGRVRLIHI 180

Query: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           FRRRVSSEISCSMNLDLNTHQIQHNWVCE
Sbjct: 181 FRRRVSSEISCSMNLDLNTHQIQHNWVCE 209

[Close]

BLAST of Cmc09g0258351 vs. ExPASy TrEMBL
Match: A0A6J1I3M2 (uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875 PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 5.7e-70
Identity = 149/214 (69.63%), Postives = 178/214 (83.18%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQ--LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFA 60
           M +DSQSFP+AHY+AHHK+DEEQ+  L TFK L KERSNKCFIY+FS FVFLSVA+LIFA
Sbjct: 1   MADDSQSFPIAHYKAHHKSDEEQRRHLTTFKALQKERSNKCFIYVFSAFVFLSVAVLIFA 60

Query: 61  LIVLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTV 120
           LIVLRVNSP+++ S++S+ KFSLSN  NSSSP SL+L+ +A   VDNSNFGPFNFD  +V
Sbjct: 61  LIVLRVNSPALHFSSLSVAKFSLSN-TNSSSP-SLNLTVTAQLAVDNSNFGPFNFDYASV 120

Query: 121 GLVYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRV 180
           G +Y G I G+ +TG GRA+AKG+K MNVTV+ SA N+S    ++ +L+LSSF  LRGRV
Sbjct: 121 GFIYAGAIVGQSTTGAGRAKAKGTKTMNVTVQASANNISADYNNSRLLNLSSFANLRGRV 180

Query: 181 RLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           RLIH+FRRR SSEISCSM LDLNTHQIQHNWVCE
Sbjct: 181 RLIHIFRRRASSEISCSMILDLNTHQIQHNWVCE 212

[Close]

BLAST of Cmc09g0258351 vs. ExPASy TrEMBL
Match: A0A6J1H2C0 (uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC111459739 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 5.3e-60
Identity = 137/212 (64.62%), Postives = 164/212 (77.36%), Query Frame = 0


Query: 1   MGEDSQSFPLAHYQAHHKTDEEQQLATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALI 60
           MGE S SFPL H QAHHKT +            E SNKCFIYIFS+FVFL VALLIF+LI
Sbjct: 1   MGEHSHSFPLPHSQAHHKTPK-----------NEPSNKCFIYIFSSFVFLCVALLIFSLI 60

Query: 61  VLRVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGL 120
           VLRVNSP+I+LS++S+ KFS+SN N+SSS  SL+L+  A F++DNSNFGPF FD  TV  
Sbjct: 61  VLRVNSPTIDLSSISVRKFSISNTNSSSS--SLNLTLIAEFSLDNSNFGPFIFDYVTVVF 120

Query: 121 VYGGMIFGERSTGGGRAEAKGSKRMNVTVEGSAKNVS---GSNGILSLSSFVKLRGRVRL 180
           +YGG+I GERSTGGGRAEAKG+ RMNV+VE S +NVS     +GIL++SSF K  GR+ L
Sbjct: 121 MYGGVIVGERSTGGGRAEAKGTTRMNVSVEASVENVSSDLNGSGILNMSSFAKFGGRIHL 180

Query: 181 IHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           IHV R+R+ SEISCS+NLDLNTHQIQ  WVC+
Sbjct: 181 IHVLRKRIWSEISCSINLDLNTHQIQPRWVCD 199

[Close]

BLAST of Cmc09g0258351 vs. TAIR 10
Match: AT1G64065.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 66/217 (30.41%), Postives = 110/217 (50.69%), Query Frame = 0


Query: 4   DSQSFPLAHYQAHHKTDEEQQ-LATFKTLHKERSNKCFIYIFSTFVFLSVALLIFALIVL 63
           D     LA  + + ++DEEQ     ++   +E   KC +Y  +  V +    LI + I L
Sbjct: 3   DEDRITLAPTEIYGRSDEEQSGPRIWRRKTEEPPGKCLVYSLTIIVIIFALCLILSSIFL 62

Query: 64  RVNSPSINLSAVSIPKFSLSNANNSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGLVY 123
           R++ P I   ++S     L +  NS++P   + +  +  ++ NSNFG F F++ T+ +VY
Sbjct: 63  RISKPEIETRSISTR--DLRSGGNSTNP-YFNATLVSDISIRNSNFGAFEFEDSTLRVVY 122

Query: 124 GGM-IFGERSTGGGRAEAKGSKRM-NVTVE-GSAKNVSGSN-------GILSLSSFVKLR 183
               + GE    G R EA  + R+  V VE GS + +   +       G L L S  ++R
Sbjct: 123 ADHGVVGETKIEGRRVEAHKTVRITGVVVEIGSFRLLDTKDLDKDLRLGFLELRSVAEVR 182

Query: 184 GRVRLIHVFRRRVSSEISCSMNLDLNTHQIQHNWVCE 210
           GR++++   R +V S +SC+M L+L    IQ N +CE
Sbjct: 183 GRIKVLGRKRWKV-SVMSCTMRLNLTGRFIQ-NLLCE 214

[Close]

BLAST of Cmc09g0258351 vs. TAIR 10
Match: AT3G54200.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family )

HSP 1 Score: 50.1 bits (118), Expect = 2.6e-06
Identity = 40/185 (21.62%), Postives = 91/185 (49.19%), Query Frame = 0


Query: 27  TFKTLHKERSNK-CFIYIFSTFVFLSVALLIFALIVLRVNSPSINLSAVSIPKFSLSNAN 86
           T K L ++R+ K C  +     + +++ ++I A  + +   P+  + +V++ +   S  N
Sbjct: 41  TAKKLRRKRNCKICICFTILLILLIAIVIVILAFTLFKPKRPTTTIDSVTVDRLQAS-VN 100

Query: 87  NSSSPNSLDLSFSAVFTVDNSNFGPFNFDNGTVGLVYGGMIFGERSTGGGRAEAKGSKRM 146
                  L+L+ +   ++ N N   F++D+ +  L Y G + GE      R  A+ +  +
Sbjct: 101 PLLLKVLLNLTLNVDLSLKNPNRIGFSYDSSSALLNYRGQVIGEAPLPANRIAARKTVPL 160

Query: 147 NVTVEGSAKNVSGSN--------GILSLSSFVKLRGRVRLIHVFRRRVSSEISCSMNLDL 203
           N+T+   A  +            G++ L++FVK+ G+V ++ +F+ +V S  SC +++ +
Sbjct: 161 NITLTLMADRLLSETQLLSDVMAGVIPLNTFVKVTGKVTVLKIFKIKVQSSSSCDLSISV 220

The following BLAST results are available for this feature:

BLAST of Cmc09g0258351 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437349.1	2.1e-106	100.00	PREDICTED: late embryogenesis abundant protein At1g64065 [Cucumis melo]	[more]
KAA0042716.1	1.0e-105	99.52	late embryogenesis abundant protein [Cucumis melo var. makuwa]	[more]
XP_004143966.1	9.6e-96	90.91	late embryogenesis abundant protein At1g64065 [Cucumis sativus]	[more]
KAE8647845.1	9.0e-94	89.95	hypothetical protein Csa_000600 [Cucumis sativus]	[more]
XP_038875090.1	5.8e-85	82.55	late embryogenesis abundant protein At1g64065 [Benincasa hispida]	[more]

BLAST of Cmc09g0258351 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6DST1	2.1e-08	30.41	Late embryogenesis abundant protein At1g64065 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Cmc09g0258351 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ATY3	9.9e-107	100.00	late embryogenesis abundant protein At1g64065 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TL68	4.9e-106	99.52	Late embryogenesis abundant protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A0A0KQT7	4.6e-96	90.91	LEA_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G152160 PE=4 ...	[more]
A0A6J1I3M2	5.7e-70	69.63	uncharacterized protein LOC111468875 OS=Cucurbita maxima OX=3661 GN=LOC111468875...	[more]
A0A6J1H2C0	5.3e-60	64.62	uncharacterized protein LOC111459739 OS=Cucurbita moschata OX=3662 GN=LOC1114597...	[more]

BLAST of Cmc09g0258351 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64065.1	1.5e-09	30.41	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]
AT3G54200.1	2.6e-06	21.62	Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 101..191 e-value: 8.0E-9 score: 36.0
None	No IPR available	PANTHER	PTHR31852	LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY	coord: 7..209
None	No IPR available	PANTHER	PTHR31852:SF192	LATE EMBRYOGENESIS ABUNDANT PROTEIN	coord: 7..209

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0258351.1	Cmc09g0258351.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane