Cmc09g0257711 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0257711
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	ribosomal L1 domain-containing protein 1-like
Location	CMiso1.1chr09: 22068133 .. 22069224 (-)
RNA-Seq Expression	Cmc09g0257711
Synteny	Cmc09g0257711

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTGGCGGACGTTAATCCTCCGACCAAAGTTGGTCGGGAAACGGCGGAGAAAGCCGTCGAATCTCTTCTTCAATGGCGGAGTTCCAAACGGGAGAAGCCCCAACTCTTCGACCAAGAAGATTTTCTATACCTCGTGGTAACCCTGAAGAAGATCCCTCCCAAAGGTCGCACAAATCCTTACAAAATCCCTCTTCCACATTCCCTTCACTCCGATTCCTCCGAACTTTGCCTCATTATCGACGATAGAACCAAGTCCAATCTCACTAAGGATGATGCCCGGAAGAAAATACAGTCTGAAAACATCCCAATTTCGAAGGTAATCAAGTTGTCAAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGTGATTCGTACGATATGTTTTTCGCCGATGATAGAGTTATTCCGCTGTTGCCGAGTCTGTTAGGGAAGCACTTTTACAAAAAGAAGAAGATTCCGGTGCCGTTGAATCTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGACCTGTTCGTCGGGATTGTTGTATTTGAGGACAGGGACGTGTAGTGTTGTGAAAGTGGCGAAGACTTCAATGGCAGTTGAAGAGATTGTGGACAATGTGATTGCGGCCATTGATGGGATTGCAGAGGTTGTGCCTAAAAAGTGGAGTAATGTGCGGTCGTTTCATTTGAAGGTCCTTGAATCTATTGCATTACCAATTTACCAAACAGTGCCGGAGTTGAAGTTTAAGATTGAGGCCGGCGTGAAGAGGAAACAAGATGAAATAACAGAAGAAGAAGCAAAAGAAGATGAAATAACAGAAGAAGAAGAAGAAGCAGTAAAGATTCCTGCTTCCGTAAAAGTTACCAACAAAAAGGAGAAAAAATTGAGCAAAAAGAAGGGTAGGATACATGAAATCAGCTACATGGACACTAATGGAGAGTTGTCCAATGACATGGGTGTTGAGGTTAAGAAAGGGTTGTTAGGATCTGATGAGATGAAGAAGAAGAAGAAGGTAAAAAAGAGTGCGGTTTTGAAATCGAAAGCGGCTGGTGGAACAAAGGTCAAGGCAAAGAAGTTGAAAGCTTGA

mRNA sequence

ATGGCTTTGGCGGACGTTAATCCTCCGACCAAAGTTGGTCGGGAAACGGCGGAGAAAGCCGTCGAATCTCTTCTTCAATGGCGGAGTTCCAAACGGGAGAAGCCCCAACTCTTCGACCAAGAAGATTTTCTATACCTCGTGGTAACCCTGAAGAAGATCCCTCCCAAAGGTCGCACAAATCCTTACAAAATCCCTCTTCCACATTCCCTTCACTCCGATTCCTCCGAACTTTGCCTCATTATCGACGATAGAACCAAGTCCAATCTCACTAAGGATGATGCCCGGAAGAAAATACAGTCTGAAAACATCCCAATTTCGAAGGTAATCAAGTTGTCAAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGTGATTCGTACGATATGTTTTTCGCCGATGATAGAGTTATTCCGCTGTTGCCGAGTCTGTTAGGGAAGCACTTTTACAAAAAGAAGAAGATTCCGGTGCCGTTGAATCTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGACCTGTTCGTCGGGATTGTTGTATTTGAGGACAGGGACGTGTAGTGTTGTGAAAGTGGCGAAGACTTCAATGGCAGTTGAAGAGATTGTGGACAATGTGATTGCGGCCATTGATGGGATTGCAGAGGTTGTGCCTAAAAAGTGGAGTAATGTGCGGTCGTTTCATTTGAAGGTCCTTGAATCTATTGCATTACCAATTTACCAAACAGTGCCGGAGTTGAAGTTTAAGATTGAGGCCGGCGTGAAGAGGAAACAAGATGAAATAACAGAAGAAGAAGCAAAAGAAGATGAAATAACAGAAGAAGAAGAAGAAGCAGTAAAGATTCCTGCTTCCGTAAAAGTTACCAACAAAAAGGAGAAAAAATTGAGCAAAAAGAAGGGTAGGATACATGAAATCAGCTACATGGACACTAATGGAGAGTTGTCCAATGACATGGGTGTTGAGGTTAAGAAAGGGTTGTTAGGATCTGATGAGATGAAGAAGAAGAAGAAGGTAAAAAAGAGTGCGGTTTTGAAATCGAAAGCGGCTGGTGGAACAAAGGTCAAGGCAAAGAAGTTGAAAGCTTGA

Coding sequence (CDS)

ATGGCTTTGGCGGACGTTAATCCTCCGACCAAAGTTGGTCGGGAAACGGCGGAGAAAGCCGTCGAATCTCTTCTTCAATGGCGGAGTTCCAAACGGGAGAAGCCCCAACTCTTCGACCAAGAAGATTTTCTATACCTCGTGGTAACCCTGAAGAAGATCCCTCCCAAAGGTCGCACAAATCCTTACAAAATCCCTCTTCCACATTCCCTTCACTCCGATTCCTCCGAACTTTGCCTCATTATCGACGATAGAACCAAGTCCAATCTCACTAAGGATGATGCCCGGAAGAAAATACAGTCTGAAAACATCCCAATTTCGAAGGTAATCAAGTTGTCAAAGCTTAAATCCGATTACCGCCCCTTTGAAGCTAAACGGAAGCTCTGTGATTCGTACGATATGTTTTTCGCCGATGATAGAGTTATTCCGCTGTTGCCGAGTCTGTTAGGGAAGCACTTTTACAAAAAGAAGAAGATTCCGGTGCCGTTGAATCTGAGGCATAAGAATTGGAAAGAACAGATCGAGAAGACCTGTTCGTCGGGATTGTTGTATTTGAGGACAGGGACGTGTAGTGTTGTGAAAGTGGCGAAGACTTCAATGGCAGTTGAAGAGATTGTGGACAATGTGATTGCGGCCATTGATGGGATTGCAGAGGTTGTGCCTAAAAAGTGGAGTAATGTGCGGTCGTTTCATTTGAAGGTCCTTGAATCTATTGCATTACCAATTTACCAAACAGTGCCGGAGTTGAAGTTTAAGATTGAGGCCGGCGTGAAGAGGAAACAAGATGAAATAACAGAAGAAGAAGCAAAAGAAGATGAAATAACAGAAGAAGAAGAAGAAGCAGTAAAGATTCCTGCTTCCGTAAAAGTTACCAACAAAAAGGAGAAAAAATTGAGCAAAAAGAAGGGTAGGATACATGAAATCAGCTACATGGACACTAATGGAGAGTTGTCCAATGACATGGGTGTTGAGGTTAAGAAAGGGTTGTTAGGATCTGATGAGATGAAGAAGAAGAAGAAGGTAAAAAAGAGTGCGGTTTTGAAATCGAAAGCGGCTGGTGGAACAAAGGTCAAGGCAAAGAAGTTGAAAGCTTGA

Protein sequence

MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKKKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKKLKA

Homology

[Close]

BLAST of Cmc09g0257711 vs. NCBI nr
Match: XP_008437251.1 (PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis melo])

HSP 1 Score: 683.3 bits (1762), Expect = 1.1e-192
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60
           MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN
Sbjct: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180

Query: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240
           LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK 300
           IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK
Sbjct: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK 300

Query: 301 KGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKK 360
           KGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKK
Sbjct: 301 KGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKK 360

Query: 361 LKA 364
           LKA
Sbjct: 361 LKA 363

[Close]

BLAST of Cmc09g0257711 vs. NCBI nr
Match: KAA0042769.1 (ribosomal L1 domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 678.3 bits (1749), Expect = 3.6e-191
Identity = 362/364 (99.45%), Postives = 363/364 (99.73%), Query Frame = 0


Query: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60
           MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN
Sbjct: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYK+PLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKVPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180

Query: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240
           LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEIT-EEEEEAVKIPASVKVTNKKEKKLSK 300
           IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEIT EEEEEAVKIPASVKVTNKKEKKLSK
Sbjct: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEEAVKIPASVKVTNKKEKKLSK 300

Query: 301 KKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAK 360
           KKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAK
Sbjct: 301 KKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAK 360

Query: 361 KLKA 364
           KLKA
Sbjct: 361 KLKA 364

[Close]

BLAST of Cmc09g0257711 vs. NCBI nr
Match: XP_004143917.1 (ribosomal L1 domain-containing protein 1 [Cucumis sativus] >XP_011654759.1 ribosomal L1 domain-containing protein 1 [Cucumis sativus] >XP_031741943.1 ribosomal L1 domain-containing protein 1 [Cucumis sativus] >KGN50109.1 hypothetical protein Csa_000511 [Cucumis sativus])

HSP 1 Score: 569.3 bits (1466), Expect = 2.4e-158
Identity = 318/372 (85.48%), Postives = 331/372 (88.98%), Query Frame = 0


Query: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60
           MALADV P TKV RETA KAVESLLQWR+SKREKPQLFDQEDFLYL+VTLKKIPPKGRTN
Sbjct: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+E++CSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180

Query: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240
           LLYLRTGTCSVVKVA+TSM VEEIVDNVIAAIDGIAEVVPKKWSNVRSF LKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK 300
           IYQTVPELKFKIEAGVK K+DEIT           +EEEA K P  VKV +KKE+KLSKK
Sbjct: 241 IYQTVPELKFKIEAGVKGKEDEIT-----------KEEEAAKSPTPVKVGSKKERKLSKK 300

Query: 301 KGRIHEISYMDTNG-ELSN-DMG-----VEVKKGL-LGSDEMK--KKKKVKKSAVLKSKA 360
           KGRIHEI YMDTNG ELSN D G     VEV + L  GSDE+K  KKKKVKKS V KSKA
Sbjct: 301 KGRIHEIRYMDTNGRELSNEDEGSDLDDVEVNENLKKGSDELKKGKKKKVKKSEVSKSKA 360

Query: 361 AGGTKVKAKKLK 363
           AG TKVKAKK+K
Sbjct: 361 AGETKVKAKKVK 361

[Close]

BLAST of Cmc09g0257711 vs. NCBI nr
Match: XP_038875579.1 (ribosomal L1 domain-containing protein 1-like [Benincasa hispida])

HSP 1 Score: 528.9 bits (1361), Expect = 3.5e-146
Identity = 306/439 (69.70%), Postives = 326/439 (74.26%), Query Frame = 0


Query: 6   VNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 65
           V P ++V RETAEKAVESLLQWR+SKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIP
Sbjct: 7   VTPSSRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 66

Query: 66  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 125
           LPHSLHSDSSE+CLIIDDRTKSNLTKD ARKKIQSENIPISKVIKLSKLKSDYRPFEAKR
Sbjct: 67  LPHSLHSDSSEICLIIDDRTKSNLTKDHARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 126

Query: 126 KLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLR 185
           KLCDSYDMFFADDRVIPL+PSLLGKHFYKKKKIPVPLNLRH+NWKEQIEK+CSSGLLYLR
Sbjct: 127 KLCDSYDMFFADDRVIPLMPSLLGKHFYKKKKIPVPLNLRHQNWKEQIEKSCSSGLLYLR 186

Query: 186 TGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 245
           TGTCSVVKVAKTSM VEEIV NVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV
Sbjct: 187 TGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 246

Query: 246 PELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKKKGRIH 305
           PELKFKIEA VK K++E+ +E+ KED        A K P SVKV+NKKEKKLSKKKGRIH
Sbjct: 247 PELKFKIEASVKGKEEEMEKEKEKED--------AGKSPTSVKVSNKKEKKLSKKKGRIH 306

Query: 306 EISYMDTNG-----------ELSNDM-GVEVKKGL-LGSDEMKKK--------------- 364
           E+ YMD+NG           +L  DM  VEV + L +GSDE+K K               
Sbjct: 307 EVRYMDSNGGELSDEDEPDSDLDEDMDNVEVSENLKMGSDELKGKKRSRVNKGKEELQTE 366

[Close]

BLAST of Cmc09g0257711 vs. NCBI nr
Match: XP_022159732.1 (ribosomal L1 domain-containing protein 1-like [Momordica charantia])

HSP 1 Score: 504.2 bits (1297), Expect = 9.3e-139
Identity = 273/349 (78.22%), Postives = 302/349 (86.53%), Query Frame = 0


Query: 6   VNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 65
           V P ++V ++TAEKAVESLLQWR+SKREKPQLFDQEDFLYLVVTL+KIPPKGRTNPYKIP
Sbjct: 9   VPPSSRVNQQTAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVTLRKIPPKGRTNPYKIP 68

Query: 66  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 125
           LPHSLHS+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR
Sbjct: 69  LPHSLHSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 128

Query: 126 KLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLR 185
           KLCDSYDMFFADDRVIPLLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEK+C+S LLYLR
Sbjct: 129 KLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCASALLYLR 188

Query: 186 TGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 245
           TGTCSVVKVAKTSM VEEIV NVIAAIDGIAE+VPKKWSNVRSFHLK+LESIALPIYQ+V
Sbjct: 189 TGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKLLESIALPIYQSV 248

Query: 246 PELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNK--KEKKLSKKKGR 305
           P+LKFKIEA +K            ED+  EE E++ K P  VKV+NK  KEKKLSKKKGR
Sbjct: 249 PDLKFKIEAAMK-----------GEDKGIEEVEDSGKSPTPVKVSNKKEKEKKLSKKKGR 308

Query: 306 IHEISYMDTNG-------ELSNDM-----GVEVKKG-LLGSDEMKKKKK 340
           IHE+ YMD+NG       EL +D+      V+V +  ++GSDE+K KK+
Sbjct: 309 IHEVRYMDSNGGELSDEDELGSDLDEDTDNVKVSEDVIMGSDELKGKKR 346

[Close]

BLAST of Cmc09g0257711 vs. ExPASy Swiss-Prot
Match: Q8BVY0 (Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.4e-33
Identity = 93/290 (32.07%), Postives = 164/290 (56.55%), Query Frame = 0


Query: 11  KVGRETAEKAVESLLQWRSSKREKPQ-LFDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHS 70
           ++ RE   KAVE +     SK+   + L    + L+L+V L KIP K      K+PLPHS
Sbjct: 30  QLDREQIRKAVEVISNRSKSKKNNNELLLSGSENLFLMVILWKIPEKELR--VKVPLPHS 89

Query: 71  LHSDSSELCLIIDDRTKSNLTKDDARKKIQSEN--IPISKVIKLSKLKSDYRPFEAKRKL 130
           + S+SS++CL   D   S    +   KK+  ++    IS++I    LK++Y+ +EAK +L
Sbjct: 90  ILSESSDVCLFTKDEFDSPEQTEGFYKKLLKKHGVNTISQIIPFKTLKTEYKAYEAKLRL 149

Query: 131 CDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYL-RT 190
             S+++F  D R+   LPS +G+HFY++KK+PV +NL  KN  ++I +  +  +L + + 
Sbjct: 150 LGSFEVFITDARIRRHLPSHIGRHFYQRKKVPVSVNLLAKNLSKEINRCITGTVLNISKR 209

Query: 191 GTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTVP 250
           G+CS +++  T M  E IVDN++A  + ++E +P+KW +V+   LK  +S++LPI+ +  
Sbjct: 210 GSCSTIRIGHTGMETEHIVDNILAVSEMLSEKLPEKWQSVKLLFLKTEKSVSLPIFSSFV 269

Query: 251 ELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKK 297
                      + ++ ++    ++ E+ + + E  K+    K+  KK KK
Sbjct: 270 ---------TSQDENAVSLRSLRKQELKKRKRENAKLKKESKMLRKKSKK 308

[Close]

BLAST of Cmc09g0257711 vs. ExPASy Swiss-Prot
Match: O76021 (Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 SV=3)

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-32
Identity = 114/385 (29.61%), Postives = 195/385 (50.65%), Query Frame = 0


Query: 11  KVGRETAEKAVESLL-QWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHS 70
           ++ +E   KAV++LL   +S K     L ++ + L+L+V L KIP K      ++ LPHS
Sbjct: 30  QLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR--VRLTLPHS 89

Query: 71  LHSDSSELCLIIDDRTKSNLTKDDA--RKKIQSENI-PISKVIKLSKLKSDYRPFEAKRK 130
           + SDS ++CL   D   S   K +   RK +    I  +S++I L  LK +Y+ +EAK +
Sbjct: 90  IRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYEAKLR 149

Query: 131 LCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYL-R 190
           L  S+D F  D R+  LLPSL+G+HFY++KK+PV +NL  KN   +I       +L + +
Sbjct: 150 LLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVLNISK 209

Query: 191 TGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 250
           +G+CS +++    M +E I++N++A   G++E +P+KW +V+   +K  +S ALPI+ + 
Sbjct: 210 SGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPIFSSF 269

Query: 251 PE-----------LKFKIEAGVKRKQDEITEEE----------------AKEDEITEEEE 310
                         K K EA  KR++    +++                +K+D   E  +
Sbjct: 270 VSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQQARKTASVLSKDDVAPESGD 329

Query: 311 EAVKIPASVKVTNKKEKKLSKKKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKK 364
             VK P S K    +  K  + +G+    +  ++  E+   + +  K       E++K  
Sbjct: 330 TTVKKPESKKEQTPEHGKKKRGRGKAQVKATNESEDEIPQLVPIGKKTPANEKVEIQKHA 389

[Close]

BLAST of Cmc09g0257711 vs. ExPASy Swiss-Prot
Match: Q5RCE6 (Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 1.6e-32
Identity = 114/385 (29.61%), Postives = 195/385 (50.65%), Query Frame = 0


Query: 11  KVGRETAEKAVESLL-QWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHS 70
           ++ +E   KAV++LL   +S K     L ++ + L+L+V L KIP K      ++ LPHS
Sbjct: 30  QLDKEQVRKAVDALLTHCKSRKNNYGLLLNENESLFLMVVLWKIPSKELR--VRLTLPHS 89

Query: 71  LHSDSSELCLIIDDRTKSNLTKDDA--RKKIQSENI-PISKVIKLSKLKSDYRPFEAKRK 130
           + SDS ++CL   D   S   K +   RK +    I  +S++I L  LK +Y+ +EAK +
Sbjct: 90  IRSDSEDICLFTKDEPNSTPEKTEQFYRKLLNKHGIKTVSQIISLQTLKKEYKSYEAKLR 149

Query: 131 LCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYL-R 190
           L  S+D F  D R+  LLPSL+G+HFY++KK+PV +NL  KN   +I       +L + +
Sbjct: 150 LLSSFDFFLTDARIRRLLPSLIGRHFYQRKKVPVSVNLLSKNLSREINDCIGGTVLNISK 209

Query: 191 TGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 250
           +G+CS +++    M +E I++N++A   G++E +P+KW +V+   +K  +S ALPI+ + 
Sbjct: 210 SGSCSAIRIGHVGMQIEHIIENIVAVTKGLSEKLPEKWESVKLLFVKTEKSAALPIFSSF 269

Query: 251 PE-----------LKFKIEAGVKRKQDEITEEE----------------AKEDEITEEEE 310
                         K K EA  KR++    +++                +K+D   E  +
Sbjct: 270 VSNWDEATKRSLLNKKKKEARRKRRERNFEKQKERKKKRQQARKTASVLSKDDVAPESGD 329

Query: 311 EAVKIPASVKVTNKKEKKLSKKKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKK 364
             VK P S K    +  K  + +G+    +  ++  E+   + +  K       E++K  
Sbjct: 330 TTVKKPESKKEQTPEHGKKKRGRGKAQVKATNESEDEIPQLVPIGKKTPANEKVEIQKHA 389

[Close]

BLAST of Cmc09g0257711 vs. ExPASy Swiss-Prot
Match: A4FV97 (Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.1e-28
Identity = 109/381 (28.61%), Postives = 195/381 (51.18%), Query Frame = 0


Query: 9   PTKVGRETAEKAVESLL-QWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 68
           P ++  E  +KAVE+LL   RS K     L ++ +  +L+V L KIP K      ++ LP
Sbjct: 26  PEQLDEEQVKKAVEALLAHSRSRKNANGLLLNENENFFLMVVLWKIPSKELR--VRLSLP 85

Query: 69  HSLHSDSSELCLIIDD--RTKSNLTKDDARKKIQSENI-PISKVIKLSKLKSDYRPFEAK 128
           H + SD +++CL   D     S  T+   +K + +  I  IS++I    LK +Y+ +EAK
Sbjct: 86  HGIRSDLADVCLFTKDEPNLSSEQTERYYKKLLNNHGIKTISQIIPFRTLKKEYKAYEAK 145

Query: 129 RKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYL 188
            +L  S+D F  D R+  LLPS LG+HFY +KK+PV +NL+ K    +I       +L +
Sbjct: 146 LRLLGSFDFFITDARIRRLLPSHLGRHFYNRKKVPVSVNLQSKTLSREINDCIGGTVLNI 205

Query: 189 -RTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQ 248
            ++G+CS +++  T M ++ IV+NV+A    +++ +P+KW +V+   +K   S++LP++ 
Sbjct: 206 SKSGSCSTIRIGHTGMPIQHIVENVVAVAKSLSQKLPEKWESVKLLFVKTERSVSLPVFS 265

Query: 249 T------------VPELKFKIEAGVKRKQDEI--TEEEAKEDEITEEEEEAVKIPASVKV 308
           +              +L  K+    ++K +     ++E KE ++ ++  +A   P +  V
Sbjct: 266 SFVSSQGEAKGLRTRDLLKKVSKKSRKKTERALKRQQEKKEKKLLKQAAKAKPAPTTDAV 325

Query: 309 TNK------KEKKLSKKKGRIHEISYMDTNGELSNDMGVEVKK-GLLGSDEMKKKKKVKK 364
             K      ++    ++ G +  +     + E    + V +K+    GS +++K    KK
Sbjct: 326 APKTGGVPTQDPAPQEETGGVSALPKAQDDSEDEIPLLVPLKETPAAGSTKIQKAAIGKK 385

[Close]

BLAST of Cmc09g0257711 vs. ExPASy Swiss-Prot
Match: Q9UT32 (Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC8F11.04 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 5.5e-25
Identity = 113/368 (30.71%), Postives = 181/368 (49.18%), Query Frame = 0


Query: 18  EKAVESLLQWRSSKREKPQ----------LFDQEDFLYLV----VTLKKIPPKGRTNPYK 77
           EK   +LL++ S ++              L D++D +  V     TLK I    +  PYK
Sbjct: 14  EKVCSALLEYESKRKSSENIDSESKKTNLLEDEQDDIEPVWLQLATLKFIGNNRKLIPYK 73

Query: 78  IPLPHSLHSDSSELCLIIDD--RTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPF 137
           I + + +   SSE CLI+ D  R   +L  +    K+      +++VI LSKLK+ +  +
Sbjct: 74  IAIKNPVIPSSSEACLIVKDPQRVYKDLVNEAGLSKV------VTRVIGLSKLKAKWNSY 133

Query: 138 EAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSS-- 197
           E KR+L D +D+F ADDRVIP+LP +LGK FY+K K+PVP+ +  K   EQ+++   S  
Sbjct: 134 EQKRQLRDQFDIFLADDRVIPMLPRILGKTFYQKSKVPVPVKI-SKGTAEQLKREVVSAY 193

Query: 198 GLLYLRTGTCS--VVKVAKTSMAVEEIVDNVIAAIDGIAE-VVPKKWSNVRSFHLKVLES 257
           G  Y  +  CS  ++K    S    E+ +NV + +  +++ +VP     + S HLK  +S
Sbjct: 194 GATYFNSAPCSSFMIKCGHVSNTSTELAENVESILQFVSKHIVPDGAKGIASIHLKTSQS 253

Query: 258 IALPIYQTVPELKFKIEAGVKRKQDEITEEEAKEDEIT-EEEEEAVKIPASVKVTNKKEK 317
           IA+P++   P LK  I +  K    E    + K DE +   +++  K+  + +  + K++
Sbjct: 254 IAIPLWNN-PNLKELIASSRKVVTKETASSKRKSDEESLPSQKKQKKVEVAKESKDSKQQ 313

Query: 318 KLSKKKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKS---KAAG 361
            +S KK          T  E+   + V+        DE  K KK K S  +     KA G
Sbjct: 314 NVSDKK--------QVTVKEVPKKLSVKNAAKTTNRDEDSKGKKAKASPKVSQSSLKANG 365

[Close]

BLAST of Cmc09g0257711 vs. ExPASy TrEMBL
Match: A0A1S3ATP9 (ribosomal L1 domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103482736 PE=4 SV=1)

HSP 1 Score: 683.3 bits (1762), Expect = 5.4e-193
Identity = 363/363 (100.00%), Postives = 363/363 (100.00%), Query Frame = 0


Query: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60
           MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN
Sbjct: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180

Query: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240
           LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK 300
           IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK
Sbjct: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK 300

Query: 301 KGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKK 360
           KGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKK
Sbjct: 301 KGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAKK 360

Query: 361 LKA 364
           LKA
Sbjct: 361 LKA 363

[Close]

BLAST of Cmc09g0257711 vs. ExPASy TrEMBL
Match: A0A5A7TN28 (Ribosomal L1 domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002690 PE=4 SV=1)

HSP 1 Score: 678.3 bits (1749), Expect = 1.7e-191
Identity = 362/364 (99.45%), Postives = 363/364 (99.73%), Query Frame = 0


Query: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60
           MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN
Sbjct: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYK+PLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKVPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180

Query: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240
           LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEIT-EEEEEAVKIPASVKVTNKKEKKLSK 300
           IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEIT EEEEEAVKIPASVKVTNKKEKKLSK
Sbjct: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEEAVKIPASVKVTNKKEKKLSK 300

Query: 301 KKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAK 360
           KKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAK
Sbjct: 301 KKGRIHEISYMDTNGELSNDMGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGGTKVKAK 360

Query: 361 KLKA 364
           KLKA
Sbjct: 361 KLKA 364

[Close]

BLAST of Cmc09g0257711 vs. ExPASy TrEMBL
Match: A0A0A0KML2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154220 PE=4 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 1.1e-158
Identity = 318/372 (85.48%), Postives = 331/372 (88.98%), Query Frame = 0


Query: 1   MALADVNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 60
           MALADV P TKV RETA KAVESLLQWR+SKREKPQLFDQEDFLYL+VTLKKIPPKGRTN
Sbjct: 1   MALADVTPTTKVRRETAAKAVESLLQWRNSKREKPQLFDQEDFLYLIVTLKKIPPKGRTN 60

Query: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120
           PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP
Sbjct: 61  PYKIPLPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRP 120

Query: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSG 180
           FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQ+E++CSSG
Sbjct: 121 FEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQVERSCSSG 180

Query: 181 LLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALP 240
           LLYLRTGTCSVVKVA+TSM VEEIVDNVIAAIDGIAEVVPKKWSNVRSF LKVLESIALP
Sbjct: 181 LLYLRTGTCSVVKVARTSMEVEEIVDNVIAAIDGIAEVVPKKWSNVRSFFLKVLESIALP 240

Query: 241 IYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKK 300
           IYQTVPELKFKIEAGVK K+DEIT           +EEEA K P  VKV +KKE+KLSKK
Sbjct: 241 IYQTVPELKFKIEAGVKGKEDEIT-----------KEEEAAKSPTPVKVGSKKERKLSKK 300

Query: 301 KGRIHEISYMDTNG-ELSN-DMG-----VEVKKGL-LGSDEMK--KKKKVKKSAVLKSKA 360
           KGRIHEI YMDTNG ELSN D G     VEV + L  GSDE+K  KKKKVKKS V KSKA
Sbjct: 301 KGRIHEIRYMDTNGRELSNEDEGSDLDDVEVNENLKKGSDELKKGKKKKVKKSEVSKSKA 360

Query: 361 AGGTKVKAKKLK 363
           AG TKVKAKK+K
Sbjct: 361 AGETKVKAKKVK 361

[Close]

BLAST of Cmc09g0257711 vs. ExPASy TrEMBL
Match: A0A6J1E0M1 (ribosomal L1 domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=LOC111026071 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 4.5e-139
Identity = 273/349 (78.22%), Postives = 302/349 (86.53%), Query Frame = 0


Query: 6   VNPPTKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIP 65
           V P ++V ++TAEKAVESLLQWR+SKREKPQLFDQEDFLYLVVTL+KIPPKGRTNPYKIP
Sbjct: 9   VPPSSRVNQQTAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVTLRKIPPKGRTNPYKIP 68

Query: 66  LPHSLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 125
           LPHSLHS+SSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR
Sbjct: 69  LPHSLHSESSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKR 128

Query: 126 KLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLR 185
           KLCDSYDMFFADDRVIPLLPSLLGKHF+KKKKIPVPLNLRHKNWKEQIEK+C+S LLYLR
Sbjct: 129 KLCDSYDMFFADDRVIPLLPSLLGKHFFKKKKIPVPLNLRHKNWKEQIEKSCASALLYLR 188

Query: 186 TGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTV 245
           TGTCSVVKVAKTSM VEEIV NVIAAIDGIAE+VPKKWSNVRSFHLK+LESIALPIYQ+V
Sbjct: 189 TGTCSVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKLLESIALPIYQSV 248

Query: 246 PELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNK--KEKKLSKKKGR 305
           P+LKFKIEA +K            ED+  EE E++ K P  VKV+NK  KEKKLSKKKGR
Sbjct: 249 PDLKFKIEAAMK-----------GEDKGIEEVEDSGKSPTPVKVSNKKEKEKKLSKKKGR 308

Query: 306 IHEISYMDTNG-------ELSNDM-----GVEVKKG-LLGSDEMKKKKK 340
           IHE+ YMD+NG       EL +D+      V+V +  ++GSDE+K KK+
Sbjct: 309 IHEVRYMDSNGGELSDEDELGSDLDEDTDNVKVSEDVIMGSDELKGKKR 346

[Close]

BLAST of Cmc09g0257711 vs. ExPASy TrEMBL
Match: A0A6J1ESQ8 (ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111435655 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 4.7e-136
Identity = 291/445 (65.39%), Postives = 313/445 (70.34%), Query Frame = 0


Query: 10  TKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLPHS 69
           ++V RETAEKAVESLLQWR+SKREKPQLFDQEDFLYLVV LKKIPPKGRTNPYKIPLPHS
Sbjct: 11  SRVRRETAEKAVESLLQWRNSKREKPQLFDQEDFLYLVVALKKIPPKGRTNPYKIPLPHS 70

Query: 70  LHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD 129
             SDSSE+CLIIDDR++SNLTKD+ARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD
Sbjct: 71  FRSDSSEICLIIDDRSRSNLTKDEARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLCD 130

Query: 130 SYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLRTGTC 189
           SYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIE++CSS LLYLRTGTC
Sbjct: 131 SYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIERSCSSALLYLRTGTC 190

Query: 190 SVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQTVPELK 249
           SVVKVAKTSM VEEIV NVIAAIDGIAE+VPKKWSNVRSFHLKVLESIALPIYQTVPELK
Sbjct: 191 SVVKVAKTSMEVEEIVSNVIAAIDGIAEIVPKKWSNVRSFHLKVLESIALPIYQTVPELK 250

Query: 250 FKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKKKGRIHEISY 309
            KI+A VK            E++ TE+E+EA K P  VKV+NKKEKK S KKGRIHE+ Y
Sbjct: 251 LKIDAAVK-----------GEEKGTEKEDEAGKSPTPVKVSNKKEKKSSMKKGRIHEVRY 310

Query: 310 MDT-----------NGELSNDM-GVEVKKGL-LGSDEMKKK------------------- 364
           MD+           NG+L  DM   EV + L  GSDE+K+K                   
Sbjct: 311 MDSNGGELSDEDDLNGDLDEDMDNAEVSENLKKGSDELKRKTRSRVNKGKEELQNDLNSE 370

[Close]

BLAST of Cmc09g0257711 vs. TAIR 10
Match: AT3G58660.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 335.1 bits (858), Expect = 7.0e-92
Identity = 196/369 (53.12%), Postives = 252/369 (68.29%), Query Frame = 0


Query: 3   LADVNPPTKVGRETAEKAVESLLQWRS--SKREKPQLFDQEDFLYLVVTLKKIPPKGRTN 62
           L   +  ++V  +T E A+  L+ WRS  SK EKPQL ++++ +YL VTLKKIP K RTN
Sbjct: 15  LVHASQTSRVSPKTVESALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKIPQKTRTN 74

Query: 63  PYKIPLPHSLHS---DSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSD 122
            Y+IPLPH L +   DS E+CLIIDDR KS LTKDDA KKI+SENIPI+KVIKLSKLKSD
Sbjct: 75  AYRIPLPHPLINPTVDSPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSD 134

Query: 123 YRPFEAKRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTC 182
           Y+ FEAKRKLCDSYDMFF D R+IPLLP ++GK F+  KKIPV L+L+H+NWK QIEK C
Sbjct: 135 YKAFEAKRKLCDSYDMFFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKAC 194

Query: 183 SSGLLYLRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESI 242
            S + ++RTGTCSV+KV K SM + EI +NV+A ++G+ E +P KW+ VRS HLK+ ES+
Sbjct: 195 GSAMFFIRTGTCSVIKVGKLSMDICEITENVMATLNGLVEFLPNKWTYVRSLHLKLSESL 254

Query: 243 ALPIYQTVPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKL 302
           ALPIYQ+VP+LK KI+A    K      +E KE E+    EE V +    K    K K  
Sbjct: 255 ALPIYQSVPDLKLKIDAFGSGKS---VVQEEKEGEV----EEVVAVDGGEKSVTGKGK-- 314

Query: 303 SKKKGRIHEISYMDTN-GELSND---MGVEVKKGLLGSDEMKKKKKVKKSAVLKSKAAGG 362
            KKKGRIHE+ YMD+N  E+ ++    G E    ++ S+E K KK+ K+ + +       
Sbjct: 315 -KKKGRIHEVRYMDSNVAEVLDEDEIGGDEDNNEIVESEEKKMKKRKKEVSEVAESEKPM 373

[Close]

BLAST of Cmc09g0257711 vs. TAIR 10
Match: AT2G42650.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 302.4 bits (773), Expect = 5.0e-82
Identity = 178/372 (47.85%), Postives = 246/372 (66.13%), Query Frame = 0


Query: 10  TKVGRETAEKAVESLLQW--RSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 69
           ++V  +T + AV++L++     S+ EKPQL +++ F YLVV LKKIP +  TN Y+IPLP
Sbjct: 2   SRVSPKTVDDAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKIPQRNFTNAYRIPLP 61

Query: 70  HSL---HSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAK 129
           H L     DS ELCLIIDDR +S LT++DA+K I+SENIPI+KV+KLSKLKSDY  FE+K
Sbjct: 62  HPLINTTEDSPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFESK 121

Query: 130 RKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYL 189
           RKLCDSYDMFF+D RVIP+LP L+GK F++ KK PV ++L+H NWKEQIEK C + + ++
Sbjct: 122 RKLCDSYDMFFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFM 181

Query: 190 RTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQT 249
           RTG+CS +KVAK SM  ++IV+NV A ++G+ +V+P +W  +RS HLK+ ES++LP+YQT
Sbjct: 182 RTGSCSAIKVAKLSMESDDIVENVTATLNGVVDVLPSRWKYIRSLHLKLSESLSLPLYQT 241

Query: 250 VPELKFKIEAGVKRKQDEITEEEAKEDEITEEEEEAVKIPASVKVTNKKEKKLSKKKGRI 309
           VP L+ KI        D +  EE K  E   + +        V  ++ K  K  KK G+I
Sbjct: 242 VPYLQLKI--------DPLGVEEVKNGEGLAKSD--------VDDSSSKSVKTKKKNGKI 301

Query: 310 HEISYMDTNGELSNDMGVEVKKGLLGSDEMK-------KKKKVKKSAVLKSKAAGGTKV- 363
           HE+ YMD+N  +S  +G +     +G DE+         KKK KK +  KS  +G   + 
Sbjct: 302 HEVRYMDSN--VSETLGDDEFDRSVGEDEVADDLNASGDKKKRKKMSSSKSAVSGKPDIV 355

[Close]

BLAST of Cmc09g0257711 vs. TAIR 10
Match: AT1G06380.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 253.4 bits (646), Expect = 2.7e-67
Identity = 129/242 (53.31%), Postives = 176/242 (72.73%), Query Frame = 0


Query: 10  TKVGRETAEKAVESLLQW--RSSKREKPQLFDQEDFLYLVVTLKKIPPKGRTNPYKIPLP 69
           +KV  +   +AV+SLL+W    SK E  +  + + F+YL+VTLK+IP   RTNP  IPLP
Sbjct: 16  SKVDPQNVNRAVKSLLKWWDSKSKTENSESLENDGFVYLIVTLKRIPQLDRTNPLMIPLP 75

Query: 70  HSL----HSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEA 129
           H L      D  ELCLIIDD+ K+ +TK+ A KKI++E IPI+ VIK+SKLKSD R  E 
Sbjct: 76  HPLIDLVAEDPPELCLIIDDKHKNKITKEAALKKIEAEKIPITTVIKVSKLKSDLRKLEE 135

Query: 130 KRKLCDSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLY 189
           +++    ++++FA+ R++P+LP LLGK F KK K P+ +NLRH +WKEQIEK C S L +
Sbjct: 136 EKR----FELYFAERRLMPMLPKLLGKEFVKKNKTPIAINLRHGSWKEQIEKACESALFF 195

Query: 190 LRTGTCSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLKVLESIALPIYQ 246
           + TGTCSVVKVAK SM   EI +NV+AA++GI ++VP +W NV+ FHLK+LES+ALP+YQ
Sbjct: 196 VGTGTCSVVKVAKLSMGRNEIAENVVAAMNGIGDLVPGRWKNVKLFHLKLLESLALPVYQ 253

[Close]

BLAST of Cmc09g0257711 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-08
Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 0


Query: 10  TKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKI-PPKGRTNPYKIPLPH 69
           +K+  E   +A+ S++     K  KP+ F +   + L + LK   P K +     + LPH
Sbjct: 2   SKLQSEAVREAISSII--THCKETKPRNFTET--IELQIGLKNYDPQKDKRFSGSVKLPH 61

Query: 70  SLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLC 129
            +     ++C++ D +        +  +KI  E++ +  + KL+K K      +  +KL 
Sbjct: 62  -VPRPKMKICMLGDAQ------HVEEAEKIGLESMDVEALKKLNKNK------KLVKKLA 121

Query: 130 DSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLRTGT 189
             +  F A + VI  +P LLG    K  K P  L    ++ + ++ +T ++    L+   
Sbjct: 122 KKFHAFLASESVIKQIPRLLGPGLNKAGKFPT-LVSHQESLESKVNETKATVKFQLKKVL 181

Query: 190 CSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLK 233
           C  V V   SM  ++I  NV  +++ +  ++ K W NVR  +LK
Sbjct: 182 CMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207

[Close]

BLAST of Cmc09g0257711 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 58.5 bits (140), Expect = 1.3e-08
Identity = 56/224 (25.00%), Postives = 104/224 (46.43%), Query Frame = 0


Query: 10  TKVGRETAEKAVESLLQWRSSKREKPQLFDQEDFLYLVVTLKKI-PPKGRTNPYKIPLPH 69
           +K+  E   +A+ S++     K  KP+ F +   + L + LK   P K +     + LPH
Sbjct: 2   SKLQSEAVREAISSII--THCKETKPRNFTET--IELQIGLKNYDPQKDKRFSGSVKLPH 61

Query: 70  SLHSDSSELCLIIDDRTKSNLTKDDARKKIQSENIPISKVIKLSKLKSDYRPFEAKRKLC 129
            +     ++C++ D +        +  +KI  E++ +  + KL+K K      +  +KL 
Sbjct: 62  -VPRPKMKICMLGDAQ------HVEEAEKIGLESMDVEALKKLNKNK------KLVKKLA 121

Query: 130 DSYDMFFADDRVIPLLPSLLGKHFYKKKKIPVPLNLRHKNWKEQIEKTCSSGLLYLRTGT 189
             +  F A + VI  +P LLG    K  K P  L    ++ + ++ +T ++    L+   
Sbjct: 122 KKFHAFLASESVIKQIPRLLGPGLNKAGKFPT-LVSHQESLESKVNETKATVKFQLKKVL 181

Query: 190 CSVVKVAKTSMAVEEIVDNVIAAIDGIAEVVPKKWSNVRSFHLK 233
           C  V V   SM  ++I  NV  +++ +  ++ K W NVR  +LK
Sbjct: 182 CMGVAVGNLSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLK 207

The following BLAST results are available for this feature:

BLAST of Cmc09g0257711 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437251.1	1.1e-192	100.00	PREDICTED: ribosomal L1 domain-containing protein 1-like [Cucumis melo]	[more]
KAA0042769.1	3.6e-191	99.45	ribosomal L1 domain-containing protein 1-like [Cucumis melo var. makuwa]	[more]
XP_004143917.1	2.4e-158	85.48	ribosomal L1 domain-containing protein 1 [Cucumis sativus] >XP_011654759.1 ribos...	[more]
XP_038875579.1	3.5e-146	69.70	ribosomal L1 domain-containing protein 1-like [Benincasa hispida]	[more]
XP_022159732.1	9.3e-139	78.22	ribosomal L1 domain-containing protein 1-like [Momordica charantia]	[more]

BLAST of Cmc09g0257711 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8BVY0	1.4e-33	32.07	Ribosomal L1 domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rsl1d1 PE=1...	[more]
O76021	1.6e-32	29.61	Ribosomal L1 domain-containing protein 1 OS=Homo sapiens OX=9606 GN=RSL1D1 PE=1 ...	[more]
Q5RCE6	1.6e-32	29.61	Ribosomal L1 domain-containing protein 1 OS=Pongo abelii OX=9601 GN=RSL1D1 PE=2 ...	[more]
A4FV97	1.1e-28	28.61	Ribosomal L1 domain-containing protein 1 OS=Bos taurus OX=9913 GN=RSL1D1 PE=2 SV...	[more]
Q9UT32	5.5e-25	30.71	Putative ribosome biogenesis protein C8F11.04 OS=Schizosaccharomyces pombe (stra...	[more]

BLAST of Cmc09g0257711 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3ATP9	5.4e-193	100.00	ribosomal L1 domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TN28	1.7e-191	99.45	Ribosomal L1 domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A0A0KML2	1.1e-158	85.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G154220 PE=4 SV=1	[more]
A0A6J1E0M1	4.5e-139	78.22	ribosomal L1 domain-containing protein 1-like OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1ESQ8	4.7e-136	65.39	ribosomal L1 domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=L...	[more]

BLAST of Cmc09g0257711 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G58660.1	7.0e-92	53.12	Ribosomal protein L1p/L10e family	[more]
AT2G42650.1	5.0e-82	47.85	Ribosomal protein L1p/L10e family	[more]
AT1G06380.1	2.7e-67	53.31	Ribosomal protein L1p/L10e family	[more]
AT5G22440.1	1.3e-08	25.00	Ribosomal protein L1p/L10e family	[more]
AT5G22440.2	1.3e-08	25.00	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 256..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..363
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 9..305
None	No IPR available	PANTHER	PTHR23105:SF31	RIBOSOMAL L1 DOMAIN-CONTAINING PROTEIN 1	coord: 9..305
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 87..179 e-value: 6.2E-16 score: 60.3
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 34..236 e-value: 3.8E-61 score: 206.4
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 17..241 e-value: 8.00441E-45 score: 151.183
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 12..242

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0257711.1	Cmc09g0257711.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
cellular_component	GO:0030686	90S preribosome
molecular_function	GO:0003723	RNA binding