Cmc09g0257261 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0257261
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	RanBD1 domain-containing protein
Location	CMiso1.1chr09: 21841429 .. 21843789 (-)
RNA-Seq Expression	Cmc09g0257261
Synteny	Cmc09g0257261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCAGGATTGGTTTTTTGTGTTGATGCAAATGCCTTACAGCATGTAAATTGGGGGAGGGAGAGAGGGCTGTTTTAAATTGAAAGATGGCGTTGAGGGGAGCAAGGATCTTAATTGTGAGTTCAGAATCTTCCTTGGTCTGGGGCATATTTGATTGTTATTTTTAATTATATAGTGCCACGTTCTTAGTTTAAGGCCTTGTTTTGGTTGTAGAAAATGACTTGGAGCAGCCAAGCAGCCCTTCTGTAAAGAAGTCTGAAGAGAAAGGGGTGGTTGTAGTGCATGAAGTTAAGTGCAAGCTTTATGTGAAGGTATTTGCTTCTGAAAAGTGGAATGTAAATGGTTCTATTTTCAGCATAAAGTTAATTAACAGCTCAGAAAGTCATTCTATTTTTCGATGAACACTCTTCATCATTAGCATTGCGAAGATTTGTTATAAAATACACACACACACACATTCATACATAAATAGATATAGATTTGGTTAGATGCATGTTGACTTTATTTTATGACCTCTTACTGGGAGGGGGAACCATTTTGTTTGAATATTTCCTTCTGGTATTCTATTGCTCTCAAAGGAAGAAAAGAGGTAGATGAGAACCAGCACTTGAAATGCATTGTTATGATTGCTGTGAGAGTTGGGAGCGGATAGCTTGATTGAGCTACTTGTTTCCAATCAGAGACAGTAGTCTGTTCTTACTCTGTTGCAGTAGTTTTCGCTTGCAACTTTTATGTACGAGACAGTAGAATTTGAGTATGGATATTATTATATGGTTTCTGCTGAAGGGATGAATGCGAAATGTTGCAAGTGATTTTAGAATATACGGGAAAGTTTGGTGATGAATATAGTGCACGAGTAGTTTTCTGGAGGTATCCTCGGCATTCCAATTATTTTGTGGTTGGCTCATATCAATTGGAGCATTATTTTTGGAAATTGGGGAGGGAAAATTGGATGATCGAATGGATACCAATGGAAGCACAAACACCTTTTGGAGGAGTATGCAAGGCACAAAATTTTCTTGGAGGAGCAGCTGACAAAAGCAGTGAATTAATTAGTGACTAAGAGATATCTTCGGCTTTGGAGTCTAGAAAACCTCTTTAAATTCTTCAAAACTTGTATCTGTTGGTGTTTTCAATAGCCTAATTGTCTGAATATAATCAGTTTATCATGATCCATTAGCCTAACTGTCTTGCATCTTGAATGCGAATGAAGTTGTAAAGTAGTAAAAATGGAAGGAAAATAAAAGTTATATTAGTTGCTTCATGATACTATCCATATATAAAATTTACTGTTGATGGATATATTGCTTCTGTCTTCCGTTATTTTTATTTGCCTTGTGTTTAATCTGACCTGAGCTTTAATTTTTTTAGTACTCTTAGGATATTGATTAGTTACTGTATCCTTGCCACTACATTTGTGTGTTGTGTACACGCAGTCCACCGATCCAGCAGATAAAGATGCATGGAAAGACAAAGGCACAGGGCAGCTTTCCATAAAATGCAAGGAGGGTATCAGCAAGGGTTCAAAGGAATCCAAACCAACAATTGTAATTCGAAATGATGTACGATTTATTATAATCTTTACTCTTTGATAATAATACTTGTTTATCCCCGCTCTCTTCCCTCAAGTCTTTATTAACAACCGTGGTTGTTGGTTCATTTGTTCGTTTGTTTGTTTTTTTATCTTTCTCTATCTTACTATGTGTTGTATATTTTACTTATAGGTGGGGAGACTGCTTCTGAATGCTTTAATCTATCCAGGGATCAAGACAAATACTCAAAAGAATTCCATTGTTGCAATATTCCATACTTCGGTAATGTTAATCTTCATACTGATTATCAACATATTTATATAGCTTGGTCAGAGATAATGTGTGTTTTGAAATTCCCAAATACATCTGTAGCTAATAGTGTTTTTGTTCTCTTGTAGAGTGAAGGCGATACAAACGATAATAGCGATAAAGATAAAGTTGTGGCACGAACATACTTGATTCGATTAAAAACAGAGGACGATCGGAATAAGCTGGCAACAGCAATTCAAGAATGTGCTCCAGCACCTTGAGAGGAGAAACTAAAGATGGTGTCTTCAGAGGAAGGCACTTTTATATGAGAAGAGAATTTTGTGAGTCTTATTTTATTTGCCCCCATTTGTGAAGGGGGTTTCTTCGGAAGACAAGATCAGTTTAAAATTCTAAATTGATCTCTCTACCAAATGAATCTACTTCTTTTAAAGAGAGGCTGAGGCAGTTGTACTATAAACAAGATAATTCAATGCTCTGTTTTATTTAGTGTAGCAATACAATAATGCAAAATTTCTTGGTTTCTCAATTTCATCTTTCTGTTTTGTCATGGCAATTTAGTG

mRNA sequence

GGTCAGGATTGGTTTTTTGTGTTGATGCAAATGCCTTACAGCATGTAAATTGGGGGAGGGAGAGAGGGCTGTTTTAAATTGAAAGATGGCGTTGAGGGGAGCAAGGATCTTAATTGTGAAAAATGACTTGGAGCAGCCAAGCAGCCCTTCTGTAAAGAAGTCTGAAGAGAAAGGGGTGGTTGTAGTGCATGAAGTTAAGTGCAAGCTTTATGTGAAGTCCACCGATCCAGCAGATAAAGATGCATGGAAAGACAAAGGCACAGGGCAGCTTTCCATAAAATGCAAGGAGGGTATCAGCAAGGGTTCAAAGGAATCCAAACCAACAATTGTAATTCGAAATGATGTGGGGAGACTGCTTCTGAATGCTTTAATCTATCCAGGGATCAAGACAAATACTCAAAAGAATTCCATTGTTGCAATATTCCATACTTCGAGTGAAGGCGATACAAACGATAATAGCGATAAAGATAAAGTTGTGGCACGAACATACTTGATTCGATTAAAAACAGAGGACGATCGGAATAAGCTGGCAACAGCAATTCAAGAATGTGCTCCAGCACCTTGAGAGGAGAAACTAAAGATGGTGTCTTCAGAGGAAGGCACTTTTATATGAGAAGAGAATTTTGTGAGTCTTATTTTATTTGCCCCCATTTGTGAAGGGGGTTTCTTCGGAAGACAAGATCAGTTTAAAATTCTAAATTGATCTCTCTACCAAATGAATCTACTTCTTTTAAAGAGAGGCTGAGGCAGTTGTACTATAAACAAGATAATTCAATGCTCTGTTTTATTTAGTGTAGCAATACAATAATGCAAAATTTCTTGGTTTCTCAATTTCATCTTTCTGTTTTGTCATGGCAATTTAGTG

Coding sequence (CDS)

ATGGCGTTGAGGGGAGCAAGGATCTTAATTGTGAAAAATGACTTGGAGCAGCCAAGCAGCCCTTCTGTAAAGAAGTCTGAAGAGAAAGGGGTGGTTGTAGTGCATGAAGTTAAGTGCAAGCTTTATGTGAAGTCCACCGATCCAGCAGATAAAGATGCATGGAAAGACAAAGGCACAGGGCAGCTTTCCATAAAATGCAAGGAGGGTATCAGCAAGGGTTCAAAGGAATCCAAACCAACAATTGTAATTCGAAATGATGTGGGGAGACTGCTTCTGAATGCTTTAATCTATCCAGGGATCAAGACAAATACTCAAAAGAATTCCATTGTTGCAATATTCCATACTTCGAGTGAAGGCGATACAAACGATAATAGCGATAAAGATAAAGTTGTGGCACGAACATACTTGATTCGATTAAAAACAGAGGACGATCGGAATAAGCTGGCAACAGCAATTCAAGAATGTGCTCCAGCACCTTGA

Protein sequence

MALRGARILIVKNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISKGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVVARTYLIRLKTEDDRNKLATAIQECAPAP

Homology

[Close]

BLAST of Cmc09g0257261 vs. NCBI nr
Match: XP_008437206.1 (PREDICTED: uncharacterized protein LOC103482703 isoform X2 [Cucumis melo])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 144 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 203

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV
Sbjct: 204 KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 263

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQECAPAP
Sbjct: 264 ARTYLIRLKTEDDRNKLATAIQECAPAP 291

[Close]

BLAST of Cmc09g0257261 vs. NCBI nr
Match: XP_008437205.1 (PREDICTED: uncharacterized protein LOC103482703 isoform X1 [Cucumis melo] >KAA0042801.1 uncharacterized protein E6C27_scaffold44G003040 [Cucumis melo var. makuwa])

HSP 1 Score: 291.6 bits (745), Expect = 4.2e-75
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 204 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 263

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV
Sbjct: 264 KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 323

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQECAPAP
Sbjct: 324 ARTYLIRLKTEDDRNKLATAIQECAPAP 351

[Close]

BLAST of Cmc09g0257261 vs. NCBI nr
Match: XP_004143935.1 (uncharacterized protein LOC101205107 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 204 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 263

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KG+KESKPTI+IRNDVGRLLLNALIYPGIKTN QKNSIVAIFHTSSEG+TNDNSDKDKVV
Sbjct: 264 KGTKESKPTILIRNDVGRLLLNALIYPGIKTNIQKNSIVAIFHTSSEGNTNDNSDKDKVV 323

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQEC PAP
Sbjct: 324 ARTYLIRLKTEDDRNKLATAIQECTPAP 351

[Close]

BLAST of Cmc09g0257261 vs. NCBI nr
Match: KAE8647872.1 (hypothetical protein Csa_000090 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 144 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 203

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KG+KESKPTI+IRNDVGRLLLNALIYPGIKTN QKNSIVAIFHTSSEG+TNDNSDKDKVV
Sbjct: 204 KGTKESKPTILIRNDVGRLLLNALIYPGIKTNIQKNSIVAIFHTSSEGNTNDNSDKDKVV 263

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQEC PAP
Sbjct: 264 ARTYLIRLKTEDDRNKLATAIQECTPAP 291

[Close]

BLAST of Cmc09g0257261 vs. NCBI nr
Match: XP_038875849.1 (uncharacterized protein LOC120068214 isoform X2 [Benincasa hispida])

HSP 1 Score: 280.0 bits (715), Expect = 1.2e-71
Identity = 140/148 (94.59%), Postives = 145/148 (97.97%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 144 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 203

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KG+KESKPTIVIRNDVGRLLLNALIYPGIKT+TQKNS+VAIFHTSSEGDTN+N DKD VV
Sbjct: 204 KGTKESKPTIVIRNDVGRLLLNALIYPGIKTSTQKNSLVAIFHTSSEGDTNENGDKDTVV 263

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLA AIQECAPAP
Sbjct: 264 ARTYLIRLKTEDDRNKLAEAIQECAPAP 291

[Close]

BLAST of Cmc09g0257261 vs. ExPASy TrEMBL
Match: A0A5A7TMK5 (RanBD1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G003040 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 204 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 263

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV
Sbjct: 264 KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 323

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQECAPAP
Sbjct: 324 ARTYLIRLKTEDDRNKLATAIQECAPAP 351

[Close]

BLAST of Cmc09g0257261 vs. ExPASy TrEMBL
Match: A0A1S3AU01 (uncharacterized protein LOC103482703 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482703 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 144 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 203

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV
Sbjct: 204 KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 263

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQECAPAP
Sbjct: 264 ARTYLIRLKTEDDRNKLATAIQECAPAP 291

[Close]

BLAST of Cmc09g0257261 vs. ExPASy TrEMBL
Match: A0A1S3AU17 (uncharacterized protein LOC103482703 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482703 PE=4 SV=1)

HSP 1 Score: 291.6 bits (745), Expect = 2.0e-75
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 204 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 263

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV
Sbjct: 264 KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 323

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQECAPAP
Sbjct: 324 ARTYLIRLKTEDDRNKLATAIQECAPAP 351

[Close]

BLAST of Cmc09g0257261 vs. ExPASy TrEMBL
Match: A0A0A0KMP1 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G155600 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 5.5e-73
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS
Sbjct: 204 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 263

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KG+KESKPTI+IRNDVGRLLLNALIYPGIKTN QKNSIVAIFHTSSEG+TNDNSDKDKVV
Sbjct: 264 KGTKESKPTILIRNDVGRLLLNALIYPGIKTNIQKNSIVAIFHTSSEGNTNDNSDKDKVV 323

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQEC PAP
Sbjct: 324 ARTYLIRLKTEDDRNKLATAIQECTPAP 351

[Close]

BLAST of Cmc09g0257261 vs. ExPASy TrEMBL
Match: A0A6J1HZR6 (uncharacterized protein LOC111469117 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111469117 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.1e-71
Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 0


Query: 12  KNDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGIS 71
           +NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDP DKDAWKDKGTGQLSIKCKEGIS
Sbjct: 144 ENDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPTDKDAWKDKGTGQLSIKCKEGIS 203

Query: 72  KGSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVV 131
           KG+KESKPTIVIRNDVGRLLLNA IYPGIKT+TQKNS+VAIFHTSSEGDTN+N DKD VV
Sbjct: 204 KGTKESKPTIVIRNDVGRLLLNASIYPGIKTSTQKNSLVAIFHTSSEGDTNENGDKDTVV 263

Query: 132 ARTYLIRLKTEDDRNKLATAIQECAPAP 160
           ARTYLIRLKTEDDRNKLATAIQECAP P
Sbjct: 264 ARTYLIRLKTEDDRNKLATAIQECAPVP 291

[Close]

BLAST of Cmc09g0257261 vs. TAIR 10
Match: AT4G11790.1 (Pleckstrin homology (PH) domain superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 7.1e-49
Identity = 98/146 (67.12%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 13  NDLEQPSSPSVKKSEEKGVVVVHEVKCKLYVKSTDPADKDAWKDKGTGQLSIKCKEGISK 72
           ++  QPSSPSVKK+EEKG+ VVHEVKCKLYVKS+DPADK  WKDKGTG L IKCKEG+ K
Sbjct: 305 DEQSQPSSPSVKKTEEKGITVVHEVKCKLYVKSSDPADK-GWKDKGTGNLYIKCKEGVDK 364

Query: 73  GSKESKPTIVIRNDVGRLLLNALIYPGIKTNTQKNSIVAIFHTSSEGDTNDNSDKDKVVA 132
           G+KESKPTI++RNDVG+LLLNAL+Y G+KT+ QKN++VAIFH+S   D+N+N     V  
Sbjct: 365 GTKESKPTILVRNDVGKLLLNALLYAGMKTSPQKNALVAIFHSSD--DSNEN-----VTP 424

Query: 133 RTYLIRLKTEDDRNKLATAIQECAPA 159
           RT+LIR K  + R+ LATAIQE AP+
Sbjct: 425 RTFLIRTKNAEARDNLATAIQEYAPS 442

The following BLAST results are available for this feature:

BLAST of Cmc09g0257261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008437206.1	4.2e-75	99.32	PREDICTED: uncharacterized protein LOC103482703 isoform X2 [Cucumis melo]	[more]
XP_008437205.1	4.2e-75	99.32	PREDICTED: uncharacterized protein LOC103482703 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_004143935.1	1.1e-72	95.95	uncharacterized protein LOC101205107 [Cucumis sativus]	[more]
KAE8647872.1	1.1e-72	95.95	hypothetical protein Csa_000090 [Cucumis sativus]	[more]
XP_038875849.1	1.2e-71	94.59	uncharacterized protein LOC120068214 isoform X2 [Benincasa hispida]	[more]

BLAST of Cmc09g0257261 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc09g0257261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TMK5	2.0e-75	99.32	RanBD1 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27...	[more]
A0A1S3AU01	2.0e-75	99.32	uncharacterized protein LOC103482703 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3AU17	2.0e-75	99.32	uncharacterized protein LOC103482703 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KMP1	5.5e-73	95.95	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G155600 PE=4...	[more]
A0A6J1HZR6	5.1e-71	93.24	uncharacterized protein LOC111469117 isoform X3 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Cmc09g0257261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G11790.1	7.1e-49	67.12	Pleckstrin homology (PH) domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 15..155 e-value: 2.7E-5 score: 1.9
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 23..156 e-value: 5.1E-9 score: 36.4
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 25..159 score: 10.737867
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 11..158 e-value: 3.6E-25 score: 90.9
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 11..158
None	No IPR available	PANTHER	PTHR23138:SF141	NUCLEAR PORE COMPLEX PROTEIN NUP50	coord: 11..158
None	No IPR available	CDD	cd13170	RanBD_NUP50	coord: 27..156 e-value: 3.58131E-26 score: 93.8213
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 25..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0257261.1	Cmc09g0257261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005643	nuclear pore