Cmc09g0256141 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0256141
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionAAI domain-containing protein
LocationCMiso1.1chr09: 21110790 .. 21111414 (+)
RNA-Seq ExpressionCmc09g0256141
SyntenyCmc09g0256141
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATGGAATTCATATATTAAATTCTTGATATTCTAACATAATGTCACTCATTGATAAAATCATCAATAGGTGAGAACTTATTAAAGAAATGACCGACTAAAGATAAAACTGGAACAATCGAAACCAAATTAGACATTGAAATAGCAACGAAAGGAAATGATGGTAATAAATTAATTTAGCATTTGAAGCCCTCTACAATTTTCTTATTGCAGCCATTAAGAATCAAGGAGAGGTCGACGGGAATGTTGAGTCTCACTCCCAACACATTGGCTTTAAGAGCAGTGCAAAGGCACACAGCAGCATCAAGATCAGCTATCCCTTGGATCAAAGGGCAGCAAGAAGTCTTGCCGATCTCGACACCAACGACACCCCCGAGCAATTTCGCACAAACCCCGAGCTTGAGAGTGTCTATTGGGCACTTCTTGTCATCCTCAGCGTAAACGAAGGAGGAGAAAACAAGATTGAGAGCCAGGAGAAATGCAAGAGAGACGGTAGCTTTGGAAGCCATATTAGTTTGATGTCTTTGAAGCTCAATGGAAACCAAAAGCTAAATTGTTATTGAGTACTGGGGGCTAGGTTGGTTTGTGAGATTTGAAGATGGGGTTTTCGGGGTTTTTATAAGGTTG

mRNA sequence

TATGGAATTCATATATTAAATTCTTGATATTCTAACATAATGTCACTCATTGATAAAATCATCAATAGGTGAGAACTTATTAAAGAAATGACCGACTAAAGATAAAACTGGAACAATCGAAACCAAATTAGACATTGAAATAGCAACGAAAGGAAATGATGGTAATAAATTAATTTAGCATTTGAAGCCCTCTACAATTTTCTTATTGCAGCCATTAAGAATCAAGGAGAGGTCGACGGGAATGTTGAGTCTCACTCCCAACACATTGGCTTTAAGAGCAGTGCAAAGGCACACAGCAGCATCAAGATCAGCTATCCCTTGGATCAAAGGGCAGCAAGAAGTCTTGCCGATCTCGACACCAACGACACCCCCGAGCAATTTCGCACAAACCCCGAGCTTGAGAGTGTCTATTGGGCACTTCTTGTCATCCTCAGCGTAAACGAAGGAGGAGAAAACAAGATTGAGAGCCAGGAGAAATGCAAGAGAGACGGTAGCTTTGGAAGCCATATTAGTTTGATGTCTTTGAAGCTCAATGGAAACCAAAAGCTAAATTGTTATTGAGTACTGGGGGCTAGGTTGGTTTGTGAGATTTGAAGATGGGGTTTTCGGGGTTTTTATAAGGTTG

Coding sequence (CDS)

ATGTTGAGTCTCACTCCCAACACATTGGCTTTAAGAGCAGTGCAAAGGCACACAGCAGCATCAAGATCAGCTATCCCTTGGATCAAAGGGCAGCAAGAAGTCTTGCCGATCTCGACACCAACGACACCCCCGAGCAATTTCGCACAAACCCCGAGCTTGAGAGTGTCTATTGGGCACTTCTTGTCATCCTCAGCGTAA

Protein sequence

MLSLTPNTLALRAVQRHTAASRSAIPWIKGQQEVLPISTPTTPPSNFAQTPSLRVSIGHFLSSSA
Homology
BLAST of Cmc09g0256141 vs. NCBI nr
Match: KAF9616337.1 (hypothetical protein IFM89_029591 [Coptis chinensis])

HSP 1 Score: 66.6 bits (161), Expect = 8.9e-08
Identity = 36/61 (59.02%), Postives = 42/61 (68.85%), Query Frame = 0

Query: 2   LSLTPNTLALRAVQRHTAASRSAIPWIKGQQEV---LPISTPTTPPSNFAQTPSLRVSIG 60
           L L PN LA  AV +  AASRSA PW++ QQE    +PI+ PT PPS  AQTPS RVS+G
Sbjct: 812 LRLIPNMLAFIAVHKQRAASRSANPWMRVQQEFSAGVPITIPTNPPSKLAQTPSFRVSLG 871

BLAST of Cmc09g0256141 vs. NCBI nr
Match: KAF9616338.1 (hypothetical protein IFM89_029592 [Coptis chinensis])

HSP 1 Score: 63.9 bits (154), Expect = 5.8e-07
Identity = 35/58 (60.34%), Postives = 40/58 (68.97%), Query Frame = 0

Query: 2   LSLTPNTLALRAVQRHTAASRSAIPWIKGQQEVLPISTPTTPPSNFAQTPSLRVSIGH 60
           L L PN LAL AV +H AASRSA PW++ QQ +L    P T PS  AQTPS RVS+GH
Sbjct: 219 LRLIPNMLALIAVHKHKAASRSASPWMREQQGLL-AGVPITRPSKLAQTPSFRVSLGH 275

BLAST of Cmc09g0256141 vs. NCBI nr
Match: PON92988.1 (hypothetical protein TorRG33x02_112670 [Trema orientale])

HSP 1 Score: 62.8 bits (151), Expect = 1.3e-06
Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 0

Query: 1  MLSLTPNTLALRAVQRHTAASRSAIPWIKGQQEV---LPISTPTTPPSNFAQTPSLRVSI 60
          ML L P  LAL AVQR  AASRSA PWI+ QQ V   +P+ T T PPS  A TP+ R S+
Sbjct: 1  MLRLIPRILALMAVQRQIAASRSARPWIRVQQGVTGGVPMVTLTNPPSKSAHTPNFRASL 60

BLAST of Cmc09g0256141 vs. NCBI nr
Match: KAF3492506.1 (hypothetical protein DY000_02054766, partial [Brassica cretica])

HSP 1 Score: 61.2 bits (147), Expect = 3.7e-06
Identity = 36/60 (60.00%), Postives = 40/60 (66.67%), Query Frame = 0

Query: 4  LTPNTLALRAVQRHTAASRSAIPWIKGQQEV---LPISTPTTPPSNFAQTPSLRVSIGHF 61
          L P TLALRAVQR TAAS SA PW++ Q  +   LP      P S  AQTPSLRVS+GHF
Sbjct: 25 LIPRTLALRAVQRQTAASTSASPWMRLQHGLTGGLPRVKSRRPLSTLAQTPSLRVSLGHF 84

BLAST of Cmc09g0256141 vs. NCBI nr
Match: KAF9619380.1 (hypothetical protein IFM89_006567 [Coptis chinensis])

HSP 1 Score: 60.8 bits (146), Expect = 4.9e-06
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0

Query: 4  LTPNTLALRAVQRHTAASRSAIPWIKGQQEV---LPISTPTTPPSNFAQTPSLRVSIGH 60
          L P+  AL AV +H AASRSA PW++ QQ +   +P STP  PPS  AQTPS   S+GH
Sbjct: 30 LIPSMFALIAVHKHKAASRSASPWMRVQQGLFAGVPTSTPINPPSKLAQTPSFSASLGH 88

BLAST of Cmc09g0256141 vs. ExPASy TrEMBL
Match: A0A2P5F5C4 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_112670 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.2e-07
Identity = 36/62 (58.06%), Postives = 41/62 (66.13%), Query Frame = 0

Query: 1  MLSLTPNTLALRAVQRHTAASRSAIPWIKGQQEV---LPISTPTTPPSNFAQTPSLRVSI 60
          ML L P  LAL AVQR  AASRSA PWI+ QQ V   +P+ T T PPS  A TP+ R S+
Sbjct: 1  MLRLIPRILALMAVQRQIAASRSARPWIRVQQGVTGGVPMVTLTNPPSKSAHTPNFRASL 60

BLAST of Cmc09g0256141 vs. ExPASy TrEMBL
Match: A0A498JQ76 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_035963 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 4.0e-06
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 0

Query: 1  MLSLTPNTLALRAVQRHTAASRSAIPWIKGQQEV---LPISTPTTPPSNFAQTPSLRVSI 60
          ML L P  LAL AVQRHTAASRSA PW++ QQ     LP+   + P    AQTP+LRVS+
Sbjct: 1  MLRLIPKMLALMAVQRHTAASRSASPWMREQQGSTGGLPMVMLSNPLRTLAQTPNLRVSL 60

Query: 61 GHFL 62
          G  +
Sbjct: 61 GQLV 64

BLAST of Cmc09g0256141 vs. ExPASy TrEMBL
Match: A0A0A9LSU9 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-05
Identity = 37/62 (59.68%), Postives = 39/62 (62.90%), Query Frame = 0

Query: 1  MLSLTPNTLALRAVQRHTAASRSAIPWIKGQQE---VLPISTPTTPPSNFAQTPSLRVSI 60
          M  L P TLALRAVQR TAASRSA P   GQ E    LP+ T  T PS  A TPS  VS+
Sbjct: 1  MSRLMPRTLALRAVQRQTAASRSASPSSSGQHESVGTLPMVT-FTSPSTLAHTPSFSVSL 60

BLAST of Cmc09g0256141 vs. ExPASy TrEMBL
Match: A0A6L2KU87 (RNA-directed DNA polymerase, eukaryota OS=Tanacetum cinerariifolium OX=118510 GN=Tci_023432 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.4e-05
Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0

Query: 2    LSLTPNTLALRAVQRHTAASRSAIPWIKGQQEVL---PISTPTTPPSNFAQTPSLRVSIG 59
            L L P TLAL AV R TAAS SA PWI+ Q  +    P +TP+ PPS  A TPS ++S+G
Sbjct: 1330 LRLIPKTLALMAVHRQTAASMSARPWIRVQHGLTGGEPSTTPSNPPSKSAHTPSFKMSLG 1389

BLAST of Cmc09g0256141 vs. ExPASy TrEMBL
Match: A0A022QUZ3 (Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a019851mg PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 3.4e-05
Identity = 34/60 (56.67%), Postives = 38/60 (63.33%), Query Frame = 0

Query: 4   LTPNTLALRAVQRHTAASRSAIPWIKGQQEVLPISTPTTPP----SNFAQTPSLRVSIGH 60
           L PNTLAL AVQR TAASRS  P ++ Q        PTT P    S FAQ P+LRVS+GH
Sbjct: 57  LMPNTLALTAVQRQTAASRSVKPPMRVQHGFFESGVPTTMPTKSFSKFAQAPNLRVSLGH 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF9616337.18.9e-0859.02hypothetical protein IFM89_029591 [Coptis chinensis][more]
KAF9616338.15.8e-0760.34hypothetical protein IFM89_029592 [Coptis chinensis][more]
PON92988.11.3e-0658.06hypothetical protein TorRG33x02_112670 [Trema orientale][more]
KAF3492506.13.7e-0660.00hypothetical protein DY000_02054766, partial [Brassica cretica][more]
KAF9619380.14.9e-0654.24hypothetical protein IFM89_006567 [Coptis chinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5F5C46.2e-0758.06Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_112670 PE=4 SV... [more]
A0A498JQ764.0e-0654.69Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_035963 PE=4 SV=1[more]
A0A0A9LSU92.6e-0559.68Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A6L2KU873.4e-0553.33RNA-directed DNA polymerase, eukaryota OS=Tanacetum cinerariifolium OX=118510 GN... [more]
A0A022QUZ33.4e-0556.67Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0256141.1Cmc09g0256141.1mRNA