Cmc09g0254091 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0254091
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
LocationCMiso1.1chr09: 19937443 .. 19942897 (+)
RNA-Seq ExpressionCmc09g0254091
SyntenyCmc09g0254091
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GATTTTACCCTCACCATCCTGACGGCAGCTGCTTAAACTGGAAAGAAAACAAGCAATTTGATTACTCGTGTGAGCAAAGAACACCGATCGGAGAAATGGCGTCGGTGGTGCGGGGGATTCTGAAATCGATCAAAGACAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTACTTGTAATGTTTTCCTCCTCTACTTTTCGTTTTTCATCCATGGTTTATATGAAGTGCCTGGGGATTTTGTGGTGGTTTCTTTTTTTTTTTTTTTTTTGGGTAATTTGACTATTGTTTCCGAATTCGAGAATTCGTGTCCTTTATTTCTTTTATGCTTAATCGATGTGATGTATTGGTGTTTCTCTTATTGGTCTGAAGATCGTTTCAATGTTCGATGACTATGGGTGTTTCTTTCCCAATTTGAATGGTTCCTTTCAGTCGCCGACGGTAGGGAATCGTTAATGCACTCTCTCTATGGCCTTAAAGTGGCCTATTTGAGATTATTTTTGCAGATTTGTATTTCGTGTAGCTATGGAGTGCACTGGCTAACAGGAATTTGCAAATGAAACATGGATATTGATACTTTTCGAGTTTAATCCCTTACTTTATTGTCTACCGATAGAATGTAGATTTTTTTTCAAAAAATTAAAATTTTCTAAATAGATGCTTTTCAGAACTGGTTGTCTCCAATTTCTTTCTCTTTTTGTCTAACTCCCCTCCTTTCTTTGTGAGTCTTGGGAATATCTCCATTGATAGTCCCTACCTTTAATTTTGTTGCAAGAAAGAAATTGTAAATGTTTTATGTTTTCTACTGTTGTTGAATCCCTCTCCTGCGGGCTAGTCGATCTTTGATTGCTATGGAGGATTAGGATCCATGAGGCAAGTCTTACTTGGTTGAGCGAACACTTTGGGTAGGCTTGTGAGAAAGATGCCTATGTTAATAGGTCCTTTTGATAGCTTGCTAAAGAGACATTCGTGTGACAAGCTGAGTGAACACCTTGGATACCTTTACTTGGCAAGTCTTACTTGGTTGTTAACAATTTGGATAGCTTGCCAAAGAGATGTTCCTGTGACGATTAAGGAGTTCCTTTTTCTTCTGCCTTTCAAATAGCATGACATCTTATTGTGGTCGACAAGATGTGTGATTTACTATGAAATATTTGGAGGAACAAACAATAGAGTGTTTAGAGGTGTGGGGAGGGACCCTTGTGATGTCTGGTCCTTGGCGAGGTTGCATGTTTCTCTTTGGGCTTTGGTTTTGGATTTTCTTTTTTTGTTTTTCCTTTGTAATTATTCTCTAGGTTGAATCTTTTTTTAGATGGAAATCCATTTGAAGGGGTTATTGCAGGCTTGTTTTTTTGCGTGCTGATTGCTCTAGTATTCCTTATTTTTTTCCTCGATGGAAACGTTTGTTTTTATATAAAAAAAAATTGATTAAGGTTTATTTTAAAATGTTTGTATTCTTGTATGTGAAACTGAACTTTTAGAAACAAAAATTGAAGCGTGAAGCATGCTTGGTTTCTTAAAGAGATTTTAAATGATTTTTTTTTTTTTTTTAAATTTCTTACCAGGAAATGTTTGAACAACAAATGATCAGATAATGGAATTGTGTTTATGGCATGTGTTTGATGTCGATAGTATGTTGTTTGCTTTAATGAGGGTTTGAAACTAAATTAGTCAGGACTGGGAAGAATAGTGTAATTTAAAGGAGGACTGGAGGAGTGAACATAAAAATTCTTGGTTTGTGCATGTATTGTTGTTGTAAATAATTAGTTTACGTCTTTGTTCATTTTGGAAATGGATACTGTCTCTGTTTCTTCACCAATATTAGAATCTGATCGTGTTAACTGTTTTATTTATTTATTTTGAATCTTGCAGGAAATGCTTAGCCGATGGAAATCTATTGTAAGTTAAATTTTCTATGAAATATTATGCTTTCCTATAAAATGGTTTGTTACTAACACCCCCTCTCTCCTTGGAACACGGATGTATATGCAAAAAAAATCATGGTTGCGTTTCTTTACATTTTATTTATGCTCGCATGAAGGTTTGCAGTATCCATTGGTTGGTGATGCAAAACCATGGGTTGTGCATACTGCATAGTATCCACCGATGTTTGTCCAGAGCCAGCCTAGATTTTCTCAACCATAGTTTCTTCCTATAAGCTTGTGTCAAAGAATGTCTCTTCCTTAGGATTTTTGTTTGATCAGGCTTGACCTGAATTGGTGCCTCCATCAAATCCAAATGGGCAAGAATCTTCCTCGTGGTCCCAATAAAACCTCCATGTTGGTGTCCGATGAACTTCAAAGTTTCTTCATCCCCTCTGTTAAGAGGGAGATTCGGTATCTTTATCCAACCCCCAAATGAGGGGAGAAACTGTTTCTGGTAGGCCAAAGTTGGGTTCTAATAGTCGAATCTCAAGAAAAAGGGACCAACTTTGTACCAATCTTTGATCTTCCATACGGAAGTAACTCGTTCTTCATTGTCACAATGCAGAAAAGCTTATCAATTGACTAAACAATGTACTTCTTCCTCGATTCAAATGTTCTGCTCCTGTACAATTTATGATTTTCATGATACTTCGAATTTTCCATCAATAATAAACCTATTGAGCCATTATTTGGCTTTTTATTTGATGTCAAACAACTTTTTTGTCTCTCATTCATGCAGTGAATAATTTCCTTTCCATGTAAAATATGCATTTTATTTGGTTTAGAGGAGTAATCTTTATCATCTCTAAATTTTCATTTTTTGTTTCAAGGCAAACAAAGATCCACAACATTGGTGCGACACTAGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAGGGTTGATGAAGAGACTCAATATGGTATTTTTTTTTTGTCTAATTGGTTTTTGTTTGAGTTTCATGATGTTACTACCTATTTGCTATGGGTCAAGGTCGAGATGTGTAAACCAAATCTTAATAAACTTGCCATGTTAGGTTTATATTTGCTTCTGGTAGATTAAGTTGCTTGAACGCTTGAATGACAAATATTTAATATTAGGAGAAAGAATGTTTAATTGTTAAAGTTACTATTTCCTTTTAGAAACTCCGCCATGTGTGGTGCATTCTTTCTAAGTAATTCAACAAGTACAACATATCCGAATTAAATCTGAACTGGGGTGCTTTTATTTCAGCAATCTAATCAAGTCTCAGAGTTTGTTGGTCTCCTACCTTACTTACTGCTGCTTTTGGTCAGTCTAGTTTCGGCGTATTAGATCTTGGATTTTTGTTGTTCGGTCACCTTTTTATATTTGCTTGTGATGTAGAGGCTTTCATTTGCCCACATTTTACATGTTCTTAATAGTTTATGGACATGATGAGGTCGCTAAGGGGTTAACATAGTTGAGATGTTCGGTGCGTCTATTGATCCCCAAGTTCTTATGCTCATTGTATAATCCTCTTGTACTTTGAGCTTTTGTCTCATTATTAATATTAATAAAAGAGACTCGTATCCTTTTCGAAAGAAAAAAAACTCCGCCATTGATATAAATATTGTTGATGATCGATTGGTTATATTTCTTGTTACTAAGTGATGCTGTTCTTTTTTCTGTTCGAAACTGCTCAATTCCCTAATCTTACCTTGCTGCTGATAGCAGTGTTTTAAAAAGCGCTCTGGGGTGTGCACCTAGGCAGAAGGCACAAGTCTAGTGCCTCGCCTTAAAAAGATGAGACTCAAAAAATAAGGTGCGCCTTAGGCGTGTGCTTTTTGTGAAGCCCCCAACGCTCAAAGCCCTGTGCCTTGAGGATTTTTCTGTTTTTCATTATATATAGGAAGTAGTAATAATTAGGGTTGTTTTTCTTTATTAACTGAAAAAATCAAATTTACTAAGACTAAATACAAACTTTCTTGTGTTTAGGAGTTTTTCTCCCCACATTTCCATTTCAACTATGCTTTCTCTTCTAAATGTAGTACTTTTATTTATAGTGTGTCTAAAAAAATCCGCTTTTTTCTGCAACCCAAAAGATTATTATGCTTTATTACTCCTTGAGTTTTAAAAAACACTAGCGTGACAAGAAAGTAGAAAAAAGCTTGCTGGACCAAGTAGCCGTTACCTTCAAAAGTGAAATTAAGAAGAGAAATTTTTTACCTGTATAAGATGAAACCAGGTAAGTGAAATGAAGAAAGGAATTTTTTATTTATATAGGATGAAACCTTTTTATCTTGAATATCGAATTAACAATTATGCTTGTTCAGCGTTCAACGTTCTCTGACCTTCTCTTTTCATGTTTTGGGAAAAGCTGAGGTAGTGAATTTGACATTTCTGTAGGTAGGCACAGGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGGTAATTCCCCTGCACTTAAAATTCTCAACTAGGCTTTGTAAAAATTTGTTTAACAAAATTGGTATATTATTAAACTATTATTTTGTTTGCACGTATCCAAATATACTTATAAAACACCGTCTTTAATAATATATTTCTGTTTACAAAATTTAGCCAAATTTTATATGGAGAAACCCAATTACAAGGATGAAAATATACGTCGATTTGTCGATATATATCATTATATCACAAATCGAAAAGCTCAACATTGGTATTGAATATCCACATACATCTTTTCCATGTTTTGCAAATGTTCGTAAAACATAAGAATGTCATATTTTTAATCCAATACGAATAGAAATACTAATAACAACATCTAGAGCTTAGTTTGAGAGTAAAAATAACTTGAATATTAATCTAAACAAATTTTCTAAACATTGACTTAAAATATCTGTCGATATTTATTTTAATCCTTGCTGAATTGAGCCTTTTTTTTTGTACATTGAGGTTAAAATTGAAATTTTGGAAGATTAAGGTTGAAATTGAGAGTATTTAACTCAATAGTAAAATAGAACCTTTTCACCTTGCCATGTAGTAAGCAATGTGAAAAATGTTTTGCAGCTTCTGATGCTGAAACCGAGCAGATATGGAATTGAACACAAGGAAAACTTTTCTGGGGAAGGTGAAGAATTTATCTACCATTCCAAGGGACATGCTCTTAATCCCGGACAGAGAGATTGGACTCGATACCAATCATGGCAACCAACCAAATCATAAGTAATTTGTCTTTCAACAATCCCTTTGTTCAATTTGGAAATCCTTGGGATATTGGTTTGTCTTTTTTCCTTTCTTCTGAATAAGCGACTTGTTGTCTATACAAGCTGTGAATTATTTTTCATTATGTTTTACTGCACAACCGATAGAGGAATTTTCAGCATGGTACTGATTTTTCAGGTTTTAACAAATTCATTGTTGTGCTAATCACCTGTCAAATTCTGTTCTTTTGGTGCCATGTAAAATGTTATATCTTGTTGGCAGCTACTATGATAGGATGTTATACCATT

mRNA sequence

GATTTTACCCTCACCATCCTGACGGCAGCTGCTTAAACTGGAAAGAAAACAAGCAATTTGATTACTCGTGTGAGCAAAGAACACCGATCGGAGAAATGGCGTCGGTGGTGCGGGGGATTCTGAAATCGATCAAAGACAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTACTTGAAATGCTTAGCCGATGGAAATCTATTGCAAACAAAGATCCACAACATTGGTGCGACACTAGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAGGGTTGATGAAGAGACTCAATATGGTAGGCACAGGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGCTTCTGATGCTGAAACCGAGCAGATATGGAATTGAACACAAGGAAAACTTTTCTGGGGAAGGTGAAGAATTTATCTACCATTCCAAGGGACATGCTCTTAATCCCGGACAGAGAGATTGGACTCGATACCAATCATGGCAACCAACCAAATCATAAGTAATTTGTCTTTCAACAATCCCTTTGTTCAATTTGGAAATCCTTGGGATATTGGTTTGTCTTTTTTCCTTTCTTCTGAATAAGCGACTTGTTGTCTATACAAGCTGTGAATTATTTTTCATTATGTTTTACTGCACAACCGATAGAGGAATTTTCAGCATGGTACTGATTTTTCAGGTTTTAACAAATTCATTGTTGTGCTAATCACCTGTCAAATTCTGTTCTTTTGGTGCCATGTAAAATGTTATATCTTGTTGGCAGCTACTATGATAGGATGTTATACCATT

Coding sequence (CDS)

ATGGCGTCGGTGGTGCGGGGGATTCTGAAATCGATCAAAGACAAAGGGATCGGCACTTTCTGGAGAGAGCTCAAGGAAGAAGGCTACTTGAAATGCTTAGCCGATGGAAATCTATTGCAAACAAAGATCCACAACATTGGTGCGACACTAGTGGGTGTTGATAAGTTTGGTAATAAATATTACCAGAGGGTTGATGAAGAGACTCAATATGGTAGGCACAGGTGGGTTGAATATGCAGAGAAGGGTCGATATAATGCTTCTCAGGTGCCACCCGAATGGCATGGCTGGCTCCACCACATAACTGATCATACAGGAGACGAGCTTCTGATGCTGAAACCGAGCAGATATGGAATTGAACACAAGGAAAACTTTTCTGGGGAAGGTGAAGAATTTATCTACCATTCCAAGGGACATGCTCTTAATCCCGGACAGAGAGATTGGACTCGATACCAATCATGGCAACCAACCAAATCATAA

Protein sequence

MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Homology
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BLAST of Cmc09g0254091 vs. NCBI nr
Match: XP_008467243.1 (PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis melo] >KAA0055156.1 putative NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 12 [Cucumis melo var. makuwa])

HSP 1 Score: 344.4 bits (882), Expect = 5.4e-91
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. NCBI nr
Match: XP_038875755.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Benincasa hispida])

HSP 1 Score: 342.4 bits (877), Expect = 2.0e-90
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. NCBI nr
Match: XP_004143640.2 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis sativus] >KGN50404.1 hypothetical protein Csa_000501 [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 2.3e-89
Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. NCBI nr
Match: XP_022159660.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Momordica charantia])

HSP 1 Score: 336.3 bits (861), Expect = 1.5e-88
Identity = 150/158 (94.94%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRG+LKSIKDKGIG FWRELKEEGYLKCL DGNLLQTKIHNIGATLVG+DKFGNKY
Sbjct: 1   MASVVRGVLKSIKDKGIGNFWRELKEEGYLKCLGDGNLLQTKIHNIGATLVGIDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+TDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           +ENFSGEG+EFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 RENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. NCBI nr
Match: XP_022958111.1 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbita moschata] >KAG6605691.1 putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035599.1 putative NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 334.3 bits (856), Expect = 5.5e-88
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGI+KSIKDKGIGTFWRELKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQ++DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. ExPASy Swiss-Prot
Match: Q9M9M9 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabidopsis thaliana OX=3702 GN=At3g03100 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 8.4e-71
Identity = 117/156 (75.00%), Postives = 138/156 (88.46%), Query Frame = 0 

Query: 3   SVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKYYQ 62
           +V +  L++I++KG+G F R ++EEG+++CL DGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 63  RVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKE 122
           ++  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITDHTGDELL LKP RYG+EHKE
Sbjct: 64  KLG-DTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKE 123

Query: 123 NFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           NFSGEG+ +IYHSKGH LNPGQ++WTRYQSW PTK+
Sbjct: 124 NFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158

[Close]
BLAST of Cmc09g0254091 vs. ExPASy Swiss-Prot
Match: Q9N2W7 (Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenorhabditis elegans OX=6239 GN=Y94H6A.8 PE=3 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.1e-14
Identity = 57/146 (39.04%), Postives = 77/146 (52.74%), Query Frame = 0 

Query: 17  IGTFWRELKEEGYLKCLADGNLLQ--TKIHNIGATLVGVDKFGNKYYQRVDEETQYGRHR 76
           I  F + +KE G +K +     L   T++     TLVG D FGN+YY+  +      R+R
Sbjct: 12  IQKFGQMVKEIGGVKAVLKKRYLMDATRV----GTLVGSDNFGNRYYE--NNAYFVPRNR 71

Query: 77  WVEYAEKG--RYNASQVPPEWHGWLHHITDHTGDELLMLKP---SRYGIEHKENFSGEGE 136
           WVE+ +K    Y+A+QVPPEWH WLHHIT    D+   +KP     + +EHKEN S    
Sbjct: 72  WVEFPDKVWLDYDATQVPPEWHSWLHHIT----DDAPSVKPPPTQDWVLEHKENTS---- 131

Query: 137 EFIYHSKGHALNPGQRDWTRYQSWQP 156
             IY  K +   P     T+ Q WQP
Sbjct: 132 --IYADKKYV--PYSTTRTKIQGWQP 139

[Close]
BLAST of Cmc09g0254091 vs. ExPASy Swiss-Prot
Match: Q54MV7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum OX=44689 GN=ndufa12 PE=2 SV=2)

HSP 1 Score: 77.0 bits (188), Expect = 2.1e-13
Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 0 

Query: 49  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDEL 108
           TLVGVDK GN+YY+  + +  YGRHRWVEY +    + + +PPE+H W+HH++D    E+
Sbjct: 33  TLVGVDKVGNRYYE--NRQEIYGRHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPSEM 92

Query: 109 LMLKPSRYGIEHKENFSG 127
           L   P+ Y   H  N +G
Sbjct: 93  LPFSPT-YKRPHIANPTG 107

[Close]
BLAST of Cmc09g0254091 vs. ExPASy Swiss-Prot
Match: Q0MQ85 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus OX=9600 GN=NDUFA12 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.2e-12
Identity = 39/94 (41.49%), Postives = 52/94 (55.32%), Query Frame = 0 

Query: 49  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHIT 108
           TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH IT
Sbjct: 37  TLVGEDKYGNKYYE--DNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHHWLHSIT 96

Query: 109 DHTGDELLMLKPSRYGIEHKENFSGEGEEFIYHS 136
           D       +         HK N +G  E+++ +S
Sbjct: 97  DDPPTTKPLTARKFIWTNHKFNVTGTPEQYVPYS 128

[Close]
BLAST of Cmc09g0254091 vs. ExPASy Swiss-Prot
Match: Q0MQ86 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Gorilla gorilla gorilla OX=9595 GN=NDUFA12 PE=2 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 8.8e-12
Identity = 38/94 (40.43%), Postives = 52/94 (55.32%), Query Frame = 0 

Query: 49  TLVGVDKFGNKYYQRVDEETQYGRHRWVEYAEK--GR-----YNASQVPPEWHGWLHHIT 108
           TLVG DK+GNKYY+  D +  +GRHRWV Y  +  G+      + S VPPEWH WLH +T
Sbjct: 37  TLVGEDKYGNKYYE--DNKQFFGRHRWVVYTTEMNGKNTFWDVDGSMVPPEWHRWLHSMT 96

Query: 109 DHTGDELLMLKPSRYGIEHKENFSGEGEEFIYHS 136
           D       +         HK N +G  E+++ +S
Sbjct: 97  DDPPTTKPLTARKFIWTNHKFNMTGTPEQYVPYS 128

[Close]
BLAST of Cmc09g0254091 vs. ExPASy TrEMBL
Match: A0A5A7ULJ6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold231G00880 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.6e-91
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. ExPASy TrEMBL
Match: A0A1S3CUD4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo OX=3656 GN=LOC103504642 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 2.6e-91
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. ExPASy TrEMBL
Match: A0A0A0KNC9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_5G172840 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.1e-89
Identity = 155/158 (98.10%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGILKSIKDKGIGTFWRELKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQ+VDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. ExPASy TrEMBL
Match: A0A6J1DZD3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica charantia OX=3673 GN=LOC111026004 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.1e-89
Identity = 150/158 (94.94%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRG+LKSIKDKGIG FWRELKEEGYLKCL DGNLLQTKIHNIGATLVG+DKFGNKY
Sbjct: 1   MASVVRGVLKSIKDKGIGNFWRELKEEGYLKCLGDGNLLQTKIHNIGATLVGIDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQRVDE+TQYGRHRWVEYAEKGRYNASQVPPEWHGWLHH+TDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQRVDEQTQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHVTDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           +ENFSGEG+EFIYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 RENFSGEGDEFIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. ExPASy TrEMBL
Match: A0A6J1H155 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita moschata OX=3662 GN=LOC111459435 PE=3 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.7e-88
Identity = 152/158 (96.20%), Postives = 156/158 (98.73%), Query Frame = 0 

Query: 1   MASVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKY 60
           MASVVRGI+KSIKDKGIGTFWRELKEEGYLKCL DGNLLQTKIHNIGATLVGVDKFGNKY
Sbjct: 1   MASVVRGIVKSIKDKGIGTFWRELKEEGYLKCLPDGNLLQTKIHNIGATLVGVDKFGNKY 60

Query: 61  YQRVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEH 120
           YQ++DEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLH+ITDHTGDELLMLKPSRYGIEH
Sbjct: 61  YQKLDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHYITDHTGDELLMLKPSRYGIEH 120

Query: 121 KENFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           KENFSGEGEE IYHSKGHALNPGQRDWTRYQSWQPTKS
Sbjct: 121 KENFSGEGEELIYHSKGHALNPGQRDWTRYQSWQPTKS 158

[Close]
BLAST of Cmc09g0254091 vs. TAIR 10
Match: AT3G03100.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 267.7 bits (683), Expect = 5.9e-72
Identity = 117/156 (75.00%), Postives = 138/156 (88.46%), Query Frame = 0 

Query: 3   SVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKYYQ 62
           +V +  L++I++KG+G F R ++EEG+++CL DGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 63  RVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKE 122
           ++  +TQYGRHRWVEYA K RYNASQVP EWHGWLH ITDHTGDELL LKP RYG+EHKE
Sbjct: 64  KLG-DTQYGRHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKE 123

Query: 123 NFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           NFSGEG+ +IYHSKGH LNPGQ++WTRYQSW PTK+
Sbjct: 124 NFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158

[Close]
BLAST of Cmc09g0254091 vs. TAIR 10
Match: AT3G03100.2 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 265.4 bits (677), Expect = 2.9e-71
Identity = 116/156 (74.36%), Postives = 137/156 (87.82%), Query Frame = 0 

Query: 3   SVVRGILKSIKDKGIGTFWRELKEEGYLKCLADGNLLQTKIHNIGATLVGVDKFGNKYYQ 62
           +V +  L++I++KG+G F R ++EEG+++CL DGNLLQTKIHNIGATLVGVDKFGNKYYQ
Sbjct: 4   TVAKSALEAIREKGLGGFMRMIREEGFMRCLPDGNLLQTKIHNIGATLVGVDKFGNKYYQ 63

Query: 63  RVDEETQYGRHRWVEYAEKGRYNASQVPPEWHGWLHHITDHTGDELLMLKPSRYGIEHKE 122
           ++  +TQYG HRWVEYA K RYNASQVP EWHGWLH ITDHTGDELL LKP RYG+EHKE
Sbjct: 64  KLG-DTQYGMHRWVEYASKDRYNASQVPAEWHGWLHFITDHTGDELLSLKPKRYGLEHKE 123

Query: 123 NFSGEGEEFIYHSKGHALNPGQRDWTRYQSWQPTKS 159
           NFSGEG+ +IYHSKGH LNPGQ++WTRYQSW PTK+
Sbjct: 124 NFSGEGDAYIYHSKGHTLNPGQKNWTRYQSWVPTKT 158

The following BLAST results are available for this feature:
BLAST of Cmc09g0254091 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008467243.15.4e-91100.00PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1... [more]
XP_038875755.12.0e-9099.37probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Benincas... [more]
XP_004143640.22.3e-8998.10probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucumis ... [more]
XP_022159660.11.5e-8894.94probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Momordic... [more]
XP_022958111.15.5e-8896.20probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 [Cucurbit... [more]
BLAST of Cmc09g0254091 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M9M98.4e-7175.00Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Arabid... [more]
Q9N2W71.1e-1439.04Probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Caenor... [more]
Q54MV72.1e-1344.87NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium d... [more]
Q0MQ855.2e-1241.49NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Pongo pygmaeus ... [more]
Q0MQ868.8e-1240.43NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Gorilla gorilla... [more]
BLAST of Cmc09g0254091 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7ULJ62.6e-91100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo va... [more]
A0A1S3CUD42.6e-91100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo OX... [more]
A0A0A0KNC91.1e-8998.10NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus... [more]
A0A6J1DZD37.1e-8994.94NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica chara... [more]
A0A6J1H1552.7e-8896.20NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita mosch... [more]
BLAST of Cmc09g0254091 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G03100.15.9e-7275.00NADH:ubiquinone oxidoreductase, 17.2kDa subunit [more]
AT3G03100.22.9e-7174.36NADH:ubiquinone oxidoreductase, 17.2kDa subunit [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PFAMPF05071NDUFA12coord: 49..155
e-value: 3.3E-26
score: 92.1
IPR007763NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12PANTHERPTHR12910NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2coord: 3..157
NoneNo IPR availablePANTHERPTHR12910:SF10NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12coord: 3..157

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0254091.1Cmc09g0254091.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
biological_process GO:0006979 response to oxidative stress
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0016020 membrane