Cmc09g0253791 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0253791
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	rRNA 2'-O-methyltransferase fibrillarin
Location	CMiso1.1chr09: 19686125 .. 19690023 (-)
RNA-Seq Expression	Cmc09g0253791
Synteny	Cmc09g0253791

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAAACCAAAATTAAAAAAAGAAAAGAAAAGAGAAAGAAAACCCTAGCTTCCTCCACTACTTAAACCCCTCTCCTCAATTCAAACCCATTCCTCTGCTCTTCTCTCTGTTTCGCCGCGCTGCTCACTCACTCTTTTCTTTCTCGTTTACTAAAATGAGACCTCCTCGAGGTGCAAGAAACACCCACTTCTTTCGCTTCTTTTATTTTCAATTTATTTGTACATGGCTTTTCAACAAAACCCTTCTTGCTAACCCTGAAGAGTAATGTTCATTTATTTGTGTTTGCTTCTCAATCTGCTTCTATACACTTCGATTTTTTGACGGTACCTTTTTCACTTCATATCGTTATGTGGGTCAATAGTTTTGAATGAGTTGACATATTTGCAGGCCGTGGTGGTGGTGGTGGTGGATTTAGGGGCAGGGGTGATGGAGGAAGGGGTAGAGGCAGAGGCGGTGGCGGTGGAGGCAGAGGTGGTGGTGGAGGAAGAGGTATGAGCCGCGGTGGTGGTCGCGGAGGAGGAAGAGGCCGTGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGGAGCAAAGTTGTCGTTGAACCCCATAGACATGAAGGGATTTTCATAGCCAAGGGTAAAGAAGATGCCCTTGTCACCAAGAATATGGTCGTTGGTGAATCTGTCTATAACGAGAAGAGAATAGCCGTACAGGTGATTTGCTTCCAACTCTTAATCTGCCTTTGACATGTTTGTTTGTTTATTTCGATCCTACTCTTACACAGTCTGAGGCAAACCATACCTTTCGAAAATTCGGAGATAAGTCTTTGATATATTCTAGTTGGCAACAATGATTTCAAATTGTTTTGGGTGTTTCTGGAACATCTAGTTAGTGCTTGTAAATTCTTTTGACTCTTTGTTGAAGGGAATCATTAACGAATAGTTTATTGTTATAACCTAAATTTATGCAATTTTGGCAAGTTTGCAGCTCTATACTTTACTAAATGCTTTATATATACCGTTATTTCAGAATGAAGATGGAACAAAAGTTGAATACAGAGTTTGGAATCCATTCAGGTCGAAGTTGGCAGCCGCTGTTCTTGGCGGTGTTGATGACATATGGATTGTATGTGCCTCTTACCCCCGATTTTGATGTTCTTATCTCTCGTCTCCTCGTTTTAAAATGTACTTTTTTTTTAAAATTATTTTTGTTATGTTTGAACTGTAGAAACCTGGTGCTCGAGTGTTATATCTTGGTGCTGCGTCTGGGACTACTGTATCTCATGTCTCTGATGTTGTTGGCCCTGTAAGTAGTTAGTTATAGAGTATATGTAGTAGTATTTTATAAAATGATGGTGCGCTTAACTGTTGCTTTGGTTTGCAGACTGGTATTGTGTATGCCGTGGAATTCTCTCATAGAAGTGGCAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTTTCTGATGTTGCTCAGCCAGATCAGGTTCACCTCTTTTGCTTCTTCTGGATGGTCTTATTATTTCTGTATGTTAGAAGCGCCACTTTTGTTGAAACTGATGGCATGGCTCTATGATTTTTTTGAAAGTATGTACTTACCGTTATTTTTCCTTTTATCTGATTAATCTTCTTGGAAGTGGTAGGTGCGATGCAATTCACTTTTAGGCTATTGTTTTCAACTCTGTTGTTTTTTATATAATTGGATTTGTTGTTTATCTTTTGTAATTTTCTTTAGGGTTTTTACTCTTGGCTCGAAGCTTTTTTTTTTCCCCTTTTGTCGTTTTCCCATTGGTATAGTTAGTTGAGTTACTGGGCTTTCGTGTTGGAAGTTCTTTTCTTCCTCTTCCCTTTTGTCTTCTGTCTTTCATTTTCTCTTAAGCTGTTTTTCTTATAAAAAAATACTATATATCTTGGGTTTTTTTTTTTCAAATTCCTTTGGGTTCAAATTATTAAGCATATGACGAAATACTCGGATTCCCCTTCAAGACTTCTTGAATGATGCAACTTTCGAGTGTCCGATGCTTCCAGAAAGCTCACCTCTCTATTTCTTCATTGATTATTTCTGAATTATATTTTCCTCATACTTCTCACCGTGTTTTCCTTTCTCAATTTTGTTTTTCATTGTTTTATAATGTATTCCAAATAGATGCTATCAAACCAATCAAGCATTCTTGTTTATGTTATAGATCCCTTACCCCTTCTGATCGGATTGGAGATTTTAAGTTACATTTCATTCTTCCTACTACTTTCATTGAAGTTCTTTTTTTGTTATTCTTATTTTTTTTTCATTGCCATTTCATTGTTGGTTGGATTGGAAACATCTGTTTTTTAGTCAGTAATTTTTTCCCCATTTATTGTTCTCTCAGCATTTATAGCAATTGATTCTGAATTTGAGTCTTCAATACTACTCATAAGACCATTATTCTCACCTGTACATTAGGACATTTTCATACTCACATCTGCCATCGTATACCTCTTTTTGGGTATGTTCGAAAGCCATGATCTTTACTAATTATTTTTGGAATCAGATGATGAATCTAATTATATCAACCACTCTGTGGGTTATTCAAGATGTGGTCTCTTTCTATAAGACCTAATCTGTCTAAATCTTCCCTCTTTATAAAACATTTCATAGTTTTCCAACTATTATATTGTTCTTACTTTATGCATCATTATTTATTTGCGACAGTGATCTACTTTGGATCTTATTATATGGTAAGTTCAGATCTGGAGGCTTAGATTCTCTATGTAGGTTCTTTATTACTTATTTGTTGTTTAGTTATGTGATTGTACTACATACCTATTTATTTATTCTCTAACCAATTGCAGTTATGATCAATACTATCACTTAGTAATTTGATCATTCATATTTTTGGTCATCCTGCAAGTATTGTTCAAATGGGCATTATGCTATTTATCTGCCCACGTTTTTACATTTTAGGCTCTTTCTATTTGCTAAGCATGTGATGAATTACTCGGATTCCCCTTCAAGACATTTAGAGTGATGCACAACCCGAGTATCTGATGCAACCAAGTACATCATGTTTTGATATAACCCTTCATTGGTTACCAAATTTGGATTTTGGCTGGGCAAATTCTTTTTTGACTTGAACTTCTAGTGTTTTCTTATGCGTTTAAGCCTCCCTTCAATGCAGGCGAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGTGAGTCACAGTCAACTTTTTGGTAAAAGTGAAAGATGGTATAGTATAACCCATACACCCAAAGATGATTTGTTTTATATTTAACTTTGTAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTGAAAGCAGATCAATTCAAACCGACTGAGCAAGTAACTCTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGTTGCCTAGTTTACACAATAGGATTTGGTTAAGTTTGTTTGTTATCCATCGTCTAGTAGTTTATGGTTCTCTTATATAGGTTGTAAGCTAGGCCATGTTGAAGAAAGTTTTGTTTAATTTTCATTTTTGTGGAGACTGATGATAATCGGTTAACGGGGATGTCTGCTCTTTGTTTTGCTTTGTTATATCTTAGATATGTGTAATTTGGATGCTGGCATTTTACTCGGAGCTTACACCTTATGGGGTTGTATTTGTTAAATTATTATTGTTGTTTTTCCAGAGAATTTGTTTTGGATTTTGGTTCAGAATTCAAATGCTTACTAAACTTTTTTAGAAACTGGACCATGAAAGTTTTTTAGAGG

mRNA sequence

TCCAAACCAAAATTAAAAAAAGAAAAGAAAAGAGAAAGAAAACCCTAGCTTCCTCCACTACTTAAACCCCTCTCCTCAATTCAAACCCATTCCTCTGCTCTTCTCTCTGTTTCGCCGCGCTGCTCACTCACTCTTTTCTTTCTCGTTTACTAAAATGAGACCTCCTCGAGGCCGTGGTGGTGGTGGTGGTGGATTTAGGGGCAGGGGTGATGGAGGAAGGGGTAGAGGCAGAGGCGGTGGCGGTGGAGGCAGAGGTGGTGGTGGAGGAAGAGGTATGAGCCGCGGTGGTGGTCGCGGAGGAGGAAGAGGCCGTGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGGAGCAAAGTTGTCGTTGAACCCCATAGACATGAAGGGATTTTCATAGCCAAGGGTAAAGAAGATGCCCTTGTCACCAAGAATATGGTCGTTGGTGAATCTGTCTATAACGAGAAGAGAATAGCCGTACAGAATGAAGATGGAACAAAAGTTGAATACAGAGTTTGGAATCCATTCAGGTCGAAGTTGGCAGCCGCTGTTCTTGGCGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTATATCTTGGTGCTGCGTCTGGGACTACTGTATCTCATGTCTCTGATGTTGTTGGCCCTACTGGTATTGTGTATGCCGTGGAATTCTCTCATAGAAGTGGCAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTTTCTGATGTTGCTCAGCCAGATCAGGCGAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTGAAAGCAGATCAATTCAAACCGACTGAGCAAGTAACTCTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGTTGCCTAGTTTACACAATAGGATTTGGTTAAGTTTGTTTGTTATCCATCGTCTAGTAGTTTATGGTTCTCTTATATAGGTTGTAAGCTAGGCCATGTTGAAGAAAGTTTTGTTTAATTTTCATTTTTGTGGAGACTGATGATAATCGGTTAACGGGGATGTCTGCTCTTTGTTTTGCTTTGTTATATCTTAGATATGTGTAATTTGGATGCTGGCATTTTACTCGGAGCTTACACCTTATGGGGTTGTATTTGTTAAATTATTATTGTTGTTTTTCCAGAGAATTTGTTTTGGATTTTGGTTCAGAATTCAAATGCTTACTAAACTTTTTTAGAAACTGGACCATGAAAGTTTTTTAGAGG

Coding sequence (CDS)

ATGAGACCTCCTCGAGGCCGTGGTGGTGGTGGTGGTGGATTTAGGGGCAGGGGTGATGGAGGAAGGGGTAGAGGCAGAGGCGGTGGCGGTGGAGGCAGAGGTGGTGGTGGAGGAAGAGGTATGAGCCGCGGTGGTGGTCGCGGAGGAGGAAGAGGCCGTGGTGGAGGAAGAGGAGGTGGTATGAAAGGTGGGAGCAAAGTTGTCGTTGAACCCCATAGACATGAAGGGATTTTCATAGCCAAGGGTAAAGAAGATGCCCTTGTCACCAAGAATATGGTCGTTGGTGAATCTGTCTATAACGAGAAGAGAATAGCCGTACAGAATGAAGATGGAACAAAAGTTGAATACAGAGTTTGGAATCCATTCAGGTCGAAGTTGGCAGCCGCTGTTCTTGGCGGTGTTGATGACATATGGATTAAACCTGGTGCTCGAGTGTTATATCTTGGTGCTGCGTCTGGGACTACTGTATCTCATGTCTCTGATGTTGTTGGCCCTACTGGTATTGTGTATGCCGTGGAATTCTCTCATAGAAGTGGCAGAGATTTGGTCAACATGGCAAAGAAGCGCACTAATGTTATACCCATCATTGAAGATGCCAGACACCCAGCCAAGTACCGGATGTTGGTTGGCATGGTGGATGTAATATTTTCTGATGTTGCTCAGCCAGATCAGGCGAGAATTTTGGCTCTTAATGCCTCATATTTTCTAAAAGCCGGTGGTCATTTTGTTATATCAATCAAGGCCAACTGCATAGACTCTACCGTTCCAGCAGAGGCAGTGTTTGCAAGTGAGGTGAATAAGTTGAAAGCAGATCAATTCAAACCGACTGAGCAAGTAACTCTTGAACCATTCGAGCGAGATCATGCCTGTGTTGTCGGTATTTATCGGGCGCCAAAGAAACAAAAGGCTGTTGCCTAG

Protein sequence

MRPPRGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQKAVA

Homology

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BLAST of Cmc09g0253791 vs. NCBI nr
Match: XP_008467209.1 (PREDICTED: probable mediator of RNA polymerase II transcription subunit 36b [Cucumis melo])

HSP 1 Score: 557.8 bits (1436), Expect = 6.0e-155
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAVA 306
           QKAVA
Sbjct: 301 QKAVA 305

[Close]

BLAST of Cmc09g0253791 vs. NCBI nr
Match: XP_004143621.2 (probable mediator of RNA polymerase II transcription subunit 36b [Cucumis sativus] >KGN50438.1 hypothetical protein Csa_000027 [Cucumis sativus])

HSP 1 Score: 547.0 bits (1408), Expect = 1.1e-151
Identity = 300/307 (97.72%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 1   MRPPRGR--GGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRG 60
           MRPPRGR  GGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRV 120
           GGMKGGSKV+VEPHRHEGIFIAKGKEDALVTKNMV GESVYNEKRI++QNEDGTKVEYRV
Sbjct: 61  GGMKGGSKVIVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISIQNEDGTKVEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAVA 306
           KKQKA A
Sbjct: 301 KKQKAAA 307

[Close]

BLAST of Cmc09g0253791 vs. NCBI nr
Match: XP_038875740.1 (rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida])

HSP 1 Score: 545.4 bits (1404), Expect = 3.1e-151
Identity = 299/305 (98.03%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG 60
           MRPPRGR GGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGR-GGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWN 120
           MKGGSKVV+EPHRHEGIFIAKGKEDALVTKNMV GESVYNEKRI+VQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVIEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAVA 306
           QK+ A
Sbjct: 301 QKSAA 304

[Close]

BLAST of Cmc09g0253791 vs. NCBI nr
Match: XP_022922917.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita moschata])

HSP 1 Score: 537.3 bits (1383), Expect = 8.3e-149
Identity = 301/306 (98.37%), Postives = 301/306 (98.37%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRG-GGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG 60
           MRPPRGR GGGGGFRGRGDGGRG GRG GGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGR-GGGGGFRGRGDGGRG-GRGRGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV GESVYNEKRIAVQNEDGTKVEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRIAVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKAVA 306
           KQKA A
Sbjct: 301 KQKAAA 304

[Close]

BLAST of Cmc09g0253791 vs. NCBI nr
Match: XP_022984980.1 (probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxima] >KAG7014755.1 Mediator of RNA polymerase II transcription subunit 36a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 536.2 bits (1380), Expect = 1.9e-148
Identity = 300/306 (98.04%), Postives = 301/306 (98.37%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRG-GGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG 60
           MRPPRGR GGGGGFRGRGDGGRG GRG GGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGR-GGGGGFRGRGDGGRG-GRGRGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV GESVYNEKRI+VQNEDGTKVEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKAVA 306
           KQKA A
Sbjct: 301 KQKAAA 304

[Close]

BLAST of Cmc09g0253791 vs. ExPASy Swiss-Prot
Match: Q9FEF8 (rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB1 PE=1 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 6.7e-125
Identity = 259/308 (84.09%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRGGG---GGGRGGGGGRGMSRGGGRGGGRGRGGGR 60
           MRPP   G GGGGFRG  DGG GRG GGG   GGGR G  GR   RG GRG  RGRGG  
Sbjct: 1   MRPPVTGGRGGGGFRGGRDGG-GRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRGGPP 60

Query: 61  GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYR 120
            GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRI+VQNEDGTKVEYR
Sbjct: 61  RGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYR 120

Query: 121 VWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHR 180
           VWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEFSHR
Sbjct: 121 VWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHR 180

Query: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK 240
           SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+FLK
Sbjct: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASFFLK 240

Query: 241 AGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA 300
            GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG YR 
Sbjct: 241 TGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRM 300

Query: 301 PKKQKAVA 306
           PKKQK  A
Sbjct: 301 PKKQKTPA 307

[Close]

BLAST of Cmc09g0253791 vs. ExPASy Swiss-Prot
Match: Q94AH9 (rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB2 PE=1 SV=2)

HSP 1 Score: 446.0 bits (1146), Expect = 3.3e-124
Identity = 261/316 (82.59%), Postives = 274/316 (86.71%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGGFRGRGDGGRGRGRGGGGGGRGG---GGGRGMSRGGGRGGGRG--RG 60
           MRPP  G GGG  G RGRG    GRG GG  GGRGG   GGGRG S  GGRG GRG  RG
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRG 60

Query: 61  GGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQ 120
           G RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRI+VQ
Sbjct: 61  GARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ 120

Query: 121 NEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTG 180
           NEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G
Sbjct: 121 NEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEG 180

Query: 181 IVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240
            VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI
Sbjct: 181 CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240

Query: 241 LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERD 300
           LALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERD
Sbjct: 241 LALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERD 300

Query: 301 HACVVGIYRAPKKQKA 304
           HACVVG YR PKK KA
Sbjct: 301 HACVVGGYRMPKKPKA 316

[Close]

BLAST of Cmc09g0253791 vs. ExPASy Swiss-Prot
Match: Q8I1F4 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 4.8e-107
Identity = 231/309 (74.76%), Postives = 257/309 (83.17%), Query Frame = 0


Query: 5   RGRGGGG-----GGF-RGRGDGGRGRGRGGGG---GGRGGGGGRGMSRGGGRGGGRGRGG 64
           RGRGGGG     GGF  GRG GGRG G GGG    GGRGGGGGRG   GGGRGGG   GG
Sbjct: 41  RGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGGFGGRGGGGGRG---GGGRGGGGRGGG 100

Query: 65  GRG---GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGT 124
           GRG   GG KGG  V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRI+V+N +G 
Sbjct: 101 GRGGGAGGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVEN-NGE 160

Query: 125 KVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAV 184
           K+EYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAV
Sbjct: 161 KIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAV 220

Query: 185 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 244
           EFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA
Sbjct: 221 EFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNA 280

Query: 245 SYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 302
            +FLK GGHFVISIKA+CIDST   EAVFASEV K++AD+ KP EQ+TLEP+ERDHA VV
Sbjct: 281 QHFLKNGGHFVISIKASCIDSTAQPEAVFASEVKKMQADKLKPQEQLTLEPYERDHAVVV 340

[Close]

BLAST of Cmc09g0253791 vs. ExPASy Swiss-Prot
Match: Q9W1V3 (rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fib PE=2 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 5.3e-106
Identity = 229/309 (74.11%), Postives = 256/309 (82.85%), Query Frame = 0


Query: 5   RGRGGGG-----GGF-RGRGDGGRGRGRGGGG---GGRGGGGGRGMSRGGGRGGGRGRGG 64
           RGRGGGG     GGF  GRG GGRG G GGG    GGRGGGGGRG   GGGRGGG   GG
Sbjct: 40  RGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGRG---GGGRGGGGRGGG 99

Query: 65  GRG---GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGT 124
           GRG   GG KGG  V +EPHRHEG+FIA+GKEDALVT+N V G  VY EKRI+V+  +G 
Sbjct: 100 GRGGGAGGFKGGKTVTIEPHRHEGVFIARGKEDALVTRNFVPGSEVYGEKRISVET-NGE 159

Query: 125 KVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAV 184
           K+EYRVWNPFRSKLAAAVLGGV+ I + PG++VLYLGAASGTTVSHVSDVVGP G+VYAV
Sbjct: 160 KIEYRVWNPFRSKLAAAVLGGVEQIHMPPGSKVLYLGAASGTTVSHVSDVVGPEGLVYAV 219

Query: 185 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 244
           EFSHRSGRDL+N+AKKRTN+IPIIEDARHP KYRMLVGMVD IF+DVAQPDQ RI+ALNA
Sbjct: 220 EFSHRSGRDLINVAKKRTNIIPIIEDARHPHKYRMLVGMVDTIFADVAQPDQGRIVALNA 279

Query: 245 SYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 302
            +FLK GGHFVISIKA+CIDST   EAVFA+EV K++AD+ KP EQ+TLEP+ERDHA VV
Sbjct: 280 QHFLKNGGHFVISIKASCIDSTAQPEAVFAAEVKKMQADKLKPQEQLTLEPYERDHAVVV 339

[Close]

BLAST of Cmc09g0253791 vs. ExPASy Swiss-Prot
Match: P22509 (rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=1 SV=2)

HSP 1 Score: 385.6 bits (989), Expect = 5.3e-106
Identity = 224/300 (74.67%), Postives = 252/300 (84.00%), Query Frame = 0


Query: 6   GRGGGGGGFRGRGDGGRGRGRGGGG-GGRGGGGGRGMSRGGGRGGGRGRGGGRGG--GMK 65
           GRGG GGG  G G GGRGRG GGGG  GRGGGGGRG   G   GGGRGRGGGRGG  G +
Sbjct: 30  GRGGFGGGRGGFGGGGRGRGGGGGGFRGRGGGGGRG--GGFQSGGGRGRGGGRGGKRGNQ 89

Query: 66  GGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWNPF 125
            G  V+VEPHRHEG+FI +GKEDALVTKN+V GESVY EKR+++ +E   K+EYR WNPF
Sbjct: 90  SGKNVMVEPHRHEGVFICRGKEDALVTKNLVPGESVYGEKRVSI-SEGDDKIEYRAWNPF 149

Query: 126 RSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGRDL 185
           RSKLAAA+LGGVD I IKPGA+VLYLGAASGTTVSHVSD+VGP G+VYAVEFSHRSGRDL
Sbjct: 150 RSKLAAAILGGVDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDL 209

Query: 186 VNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGGHF 245
           +N+AKKRTN+IP+IEDARHP KYRML+ MVDVIF+DVAQPDQ RI+ALNA  FL+ GGHF
Sbjct: 210 INLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVAQPDQTRIVALNAHTFLRNGGHF 269

Query: 246 VISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKKQK 303
           VISIKANCIDST  AEAVFASEV K++ +  KP EQ+TLEP+ERDHA VVG+YR P K K
Sbjct: 270 VISIKANCIDSTASAEAVFASEVKKMQQENMKPQEQLTLEPYERDHAVVVGVYRPPPKAK 326

[Close]

BLAST of Cmc09g0253791 vs. ExPASy TrEMBL
Match: A0A1S3CT72 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucumis melo OX=3656 GN=LOC103504613 PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 2.9e-155
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG 60
           MRPPRGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG
Sbjct: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGGG 60

Query: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWN 120
           MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWN
Sbjct: 61  MKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVWN 120

Query: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180
           PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR
Sbjct: 121 PFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSGR 180

Query: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240
           DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG
Sbjct: 181 DLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAGG 240

Query: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300
           HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK
Sbjct: 241 HFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPKK 300

Query: 301 QKAVA 306
           QKAVA
Sbjct: 301 QKAVA 305

[Close]

BLAST of Cmc09g0253791 vs. ExPASy TrEMBL
Match: A0A0A0KLF9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1)

HSP 1 Score: 547.0 bits (1408), Expect = 5.1e-152
Identity = 300/307 (97.72%), Postives = 303/307 (98.70%), Query Frame = 0


Query: 1   MRPPRGR--GGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRG 60
           MRPPRGR  GGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRG
Sbjct: 1   MRPPRGRGGGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRV 120
           GGMKGGSKV+VEPHRHEGIFIAKGKEDALVTKNMV GESVYNEKRI++QNEDGTKVEYRV
Sbjct: 61  GGMKGGSKVIVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISIQNEDGTKVEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAVA 306
           KKQKA A
Sbjct: 301 KKQKAAA 307

[Close]

BLAST of Cmc09g0253791 vs. ExPASy TrEMBL
Match: A0A6J1E4P7 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita moschata OX=3662 GN=LOC111430753 PE=3 SV=1)

HSP 1 Score: 537.3 bits (1383), Expect = 4.0e-149
Identity = 301/306 (98.37%), Postives = 301/306 (98.37%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRG-GGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG 60
           MRPPRGR GGGGGFRGRGDGGRG GRG GGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGR-GGGGGFRGRGDGGRG-GRGRGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV GESVYNEKRIAVQNEDGTKVEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRIAVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKAVA 306
           KQKA A
Sbjct: 301 KQKAAA 304

[Close]

BLAST of Cmc09g0253791 vs. ExPASy TrEMBL
Match: A0A6J1JA27 (probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita maxima OX=3661 GN=LOC111483086 PE=3 SV=1)

HSP 1 Score: 536.2 bits (1380), Expect = 9.0e-149
Identity = 300/306 (98.04%), Postives = 301/306 (98.37%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRG-GGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG 60
           MRPPRGR GGGGGFRGRGDGGRG GRG GGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG
Sbjct: 1   MRPPRGR-GGGGGFRGRGDGGRG-GRGRGGGGGRGGGGGRGMSRGGGRGGGRGRGGGRGG 60

Query: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRVW 120
           GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV GESVYNEKRI+VQNEDGTKVEYRVW
Sbjct: 61  GMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVSGESVYNEKRISVQNEDGTKVEYRVW 120

Query: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180
           NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG
Sbjct: 121 NPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRSG 180

Query: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240
           RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG
Sbjct: 181 RDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKAG 240

Query: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300
           GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK
Sbjct: 241 GHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAPK 300

Query: 301 KQKAVA 306
           KQKA A
Sbjct: 301 KQKAAA 304

[Close]

BLAST of Cmc09g0253791 vs. ExPASy TrEMBL
Match: A0A1S3AY25 (mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=3656 GN=LOC103484122 PE=3 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 1.7e-147
Identity = 299/307 (97.39%), Postives = 301/307 (98.05%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRG-GGGGGRGGGGGRGM-SRGGGRGGGRGRGGGRG 60
           MRPPRGR GGGGGFRGRGDGGRG GRG GGGGGRGGGGGRGM SRGGGRGGGRGRGGGRG
Sbjct: 1   MRPPRGR-GGGGGFRGRGDGGRG-GRGRGGGGGRGGGGGRGMQSRGGGRGGGRGRGGGRG 60

Query: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYRV 120
           GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMV GESVYNEKRI+VQNEDGTK+EYRV
Sbjct: 61  GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVTGESVYNEKRISVQNEDGTKIEYRV 120

Query: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180
           WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS
Sbjct: 121 WNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHRS 180

Query: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240
           GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA
Sbjct: 181 GRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLKA 240

Query: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300
           GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP
Sbjct: 241 GGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRAP 300

Query: 301 KKQKAVA 306
           KKQKA A
Sbjct: 301 KKQKAAA 305

[Close]

BLAST of Cmc09g0253791 vs. TAIR 10
Match: AT5G52470.1 (fibrillarin 1 )

HSP 1 Score: 448.4 bits (1152), Expect = 4.7e-126
Identity = 259/308 (84.09%), Postives = 271/308 (87.99%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRGGG---GGGRGGGGGRGMSRGGGRGGGRGRGGGR 60
           MRPP   G GGGGFRG  DGG GRG GGG   GGGR G  GR   RG GRG  RGRGG  
Sbjct: 1   MRPPVTGGRGGGGFRGGRDGG-GRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRGGPP 60

Query: 61  GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYR 120
            GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRI+VQNEDGTKVEYR
Sbjct: 61  RGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYR 120

Query: 121 VWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHR 180
           VWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEFSHR
Sbjct: 121 VWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHR 180

Query: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASYFLK 240
           SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNAS+FLK
Sbjct: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNASFFLK 240

Query: 241 AGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVVGIYRA 300
            GGHFVISIKANCIDSTV AEAVF SEV KL+ +QFKP EQVTLEPFERDHACVVG YR 
Sbjct: 241 TGGHFVISIKANCIDSTVAAEAVFQSEVKKLQQEQFKPAEQVTLEPFERDHACVVGGYRM 300

Query: 301 PKKQKAVA 306
           PKKQK  A
Sbjct: 301 PKKQKTPA 307

[Close]

BLAST of Cmc09g0253791 vs. TAIR 10
Match: AT4G25630.1 (fibrillarin 2 )

HSP 1 Score: 446.0 bits (1146), Expect = 2.4e-125
Identity = 261/316 (82.59%), Postives = 274/316 (86.71%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGGFRGRGDGGRGRGRGGGGGGRGG---GGGRGMSRGGGRGGGRG--RG 60
           MRPP  G GGG  G RGRG    GRG GG  GGRGG   GGGRG S  GGRG GRG  RG
Sbjct: 1   MRPPLTGSGGGFSGGRGRGGYSGGRGDGGFSGGRGGGGRGGGRGFSDRGGRGRGRGPPRG 60

Query: 61  GGRG-------GGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQ 120
           G RG       GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRI+VQ
Sbjct: 61  GARGGRGPAGRGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQ 120

Query: 121 NEDGTKVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTG 180
           NEDGTK EYRVWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G
Sbjct: 121 NEDGTKTEYRVWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEG 180

Query: 181 IVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240
            VYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI
Sbjct: 181 CVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARI 240

Query: 241 LALNASYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERD 300
           LALNASYFLK+GGHFVISIKANCIDSTVPAEAVF +EV KL+ +QFKP EQVTLEPFERD
Sbjct: 241 LALNASYFLKSGGHFVISIKANCIDSTVPAEAVFQTEVKKLQQEQFKPAEQVTLEPFERD 300

Query: 301 HACVVGIYRAPKKQKA 304
           HACVVG YR PKK KA
Sbjct: 301 HACVVGGYRMPKKPKA 316

[Close]

BLAST of Cmc09g0253791 vs. TAIR 10
Match: AT5G52490.1 (Fibrillarin family protein )

HSP 1 Score: 335.9 bits (860), Expect = 3.4e-92
Identity = 201/308 (65.26%), Postives = 231/308 (75.00%), Query Frame = 0


Query: 1   MRPP-RGRGGGGGGFRGRGDGGRGRGRGGGGGGRGGGGGRGMSRGGGRGG--GRGRGGGR 60
           M+PP RGRGGG         GGRG  RGG G            RG GRGG  GRGRG GR
Sbjct: 1   MKPPQRGRGGG-------VRGGRGLARGGEGSA---------VRGSGRGGESGRGRGPGR 60

Query: 61  -----GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGT 120
                 GG+KGGSKV+V PHRH G+F+AK K DALVTKN+V GE +YNEKRI VQNED +
Sbjct: 61  VKSESDGGIKGGSKVLVTPHRHAGVFVAKSKADALVTKNLVPGEIIYNEKRIFVQNEDRS 120

Query: 121 KVEYRVWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAV 180
            VEYRVWNP RSKLA A+  GVD+IWIKPG +VLYLGA+SG TVSHVSD+VGP G VYAV
Sbjct: 121 TVEYRVWNPHRSKLADAITTGVDNIWIKPGVKVLYLGASSGYTVSHVSDIVGPEGCVYAV 180

Query: 181 EFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILALNA 240
           E S   G+ L+NMA+KRTNVIPIIEDARHPAKYRMLVGMVD+IFSDV  P+QA IL+LNA
Sbjct: 181 EHSDICGKVLMNMAEKRTNVIPIIEDARHPAKYRMLVGMVDIIFSDVNHPEQANILSLNA 240

Query: 241 SYFLKAGGHFVISIKANCIDSTVPAEAVFASEVNKLKADQFKPTEQVTLEPFERDHACVV 300
           SYFLK+GGHF+ISIKAN IDST+ AE V+  EV KL+ ++ +PTE + L+  E  HACV 
Sbjct: 241 SYFLKSGGHFMISIKANSIDSTIAAETVYQMEVEKLQMEELRPTEILHLDSCEEKHACVF 292

[Close]

BLAST of Cmc09g0253791 vs. TAIR 10
Match: AT5G52470.2 (fibrillarin 1 )

HSP 1 Score: 317.0 bits (811), Expect = 1.6e-86
Identity = 191/227 (84.14%), Postives = 200/227 (88.11%), Query Frame = 0


Query: 1   MRPPRGRGGGGGGFRGRGDGGRGRGRGGG---GGGRGGGGGRGMSRGGGRGGGRGRGGGR 60
           MRPP   G GGGGFRG  DGG GRG GGG   GGGR G  GR   RG GRG  RGRGG  
Sbjct: 1   MRPPVTGGRGGGGFRGGRDGG-GRGFGGGRSFGGGRSGDRGRSGPRGRGRGAPRGRGGPP 60

Query: 61  GGGMKGGSKVVVEPHRHEGIFIAKGKEDALVTKNMVVGESVYNEKRIAVQNEDGTKVEYR 120
            GGMKGGSKV+VEPHRH G+FIAKGKEDALVTKN+V GE+VYNEKRI+VQNEDGTKVEYR
Sbjct: 61  RGGMKGGSKVIVEPHRHAGVFIAKGKEDALVTKNLVPGEAVYNEKRISVQNEDGTKVEYR 120

Query: 121 VWNPFRSKLAAAVLGGVDDIWIKPGARVLYLGAASGTTVSHVSDVVGPTGIVYAVEFSHR 180
           VWNPFRSKLAAA+LGGVD+IWIKPGA+VLYLGAASGTTVSHVSD+VGP G VYAVEFSHR
Sbjct: 121 VWNPFRSKLAAAILGGVDNIWIKPGAKVLYLGAASGTTVSHVSDLVGPEGCVYAVEFSHR 180

Query: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 225
           SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ
Sbjct: 181 SGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQ 226

The following BLAST results are available for this feature:

BLAST of Cmc09g0253791 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008467209.1	6.0e-155	100.00	PREDICTED: probable mediator of RNA polymerase II transcription subunit 36b [Cuc...	[more]
XP_004143621.2	1.1e-151	97.72	probable mediator of RNA polymerase II transcription subunit 36b [Cucumis sativu...	[more]
XP_038875740.1	3.1e-151	98.03	rRNA 2'-O-methyltransferase fibrillarin 1-like [Benincasa hispida]	[more]
XP_022922917.1	8.3e-149	98.37	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita mosc...	[more]
XP_022984980.1	1.9e-148	98.04	probable mediator of RNA polymerase II transcription subunit 36b [Cucurbita maxi...	[more]

BLAST of Cmc09g0253791 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FEF8	6.7e-125	84.09	rRNA 2'-O-methyltransferase fibrillarin 1 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q94AH9	3.3e-124	82.59	rRNA 2'-O-methyltransferase fibrillarin 2 OS=Arabidopsis thaliana OX=3702 GN=FIB...	[more]
Q8I1F4	4.8e-107	74.76	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila erecta OX=7220 GN=Fib PE=3...	[more]
Q9W1V3	5.3e-106	74.11	rRNA 2'-O-methyltransferase fibrillarin OS=Drosophila melanogaster OX=7227 GN=Fi...	[more]
P22509	5.3e-106	74.67	rRNA 2'-O-methyltransferase fibrillarin OS=Rattus norvegicus OX=10116 GN=Fbl PE=...	[more]

BLAST of Cmc09g0253791 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CT72	2.9e-155	100.00	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucumis melo...	[more]
A0A0A0KLF9	5.1e-152	97.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174640 PE=3 SV=1	[more]
A0A6J1E4P7	4.0e-149	98.37	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita mo...	[more]
A0A6J1JA27	9.0e-149	98.04	probable mediator of RNA polymerase II transcription subunit 36b OS=Cucurbita ma...	[more]
A0A1S3AY25	1.7e-147	97.39	mediator of RNA polymerase II transcription subunit 36a-like OS=Cucumis melo OX=...	[more]

BLAST of Cmc09g0253791 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G52470.1	4.7e-126	84.09	fibrillarin 1	[more]
AT4G25630.1	2.4e-125	82.59	fibrillarin 2	[more]
AT5G52490.1	3.4e-92	65.26	Fibrillarin family protein	[more]
AT5G52470.2	1.6e-86	84.14	fibrillarin 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000692	Fibrillarin	PRINTS	PR00052	FIBRILLARIN	coord: 192..221 score: 70.24 coord: 222..251 score: 67.62 coord: 274..295 score: 61.36 coord: 115..134 score: 75.71 coord: 142..163 score: 79.22 coord: 167..184 score: 72.22 coord: 87..106 score: 61.79
IPR000692	Fibrillarin	SMART	SM01206	Fibrillarin_2	coord: 69..297 e-value: 9.4E-172 score: 586.5
IPR000692	Fibrillarin	PIRSF	PIRSF006540	Nop17p	coord: 30..299 e-value: 6.2E-121 score: 400.4
IPR000692	Fibrillarin	PFAM	PF01269	Fibrillarin	coord: 69..296 e-value: 2.5E-109 score: 363.7
IPR000692	Fibrillarin	HAMAP	MF_00351	RNA_methyltransf_FlpA	coord: 83..296 score: 36.797459
None	No IPR available	GENE3D	3.30.200.20	Phosphorylase Kinase; domain 1	coord: 64..119 e-value: 8.9E-29 score: 101.1
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 120..297 e-value: 1.6E-88 score: 296.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..66
None	No IPR available	PANTHER	PTHR10335:SF22	FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED	coord: 4..303
None	No IPR available	PANTHER	PTHR10335	RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN	coord: 4..303
IPR020813	Fibrillarin, conserved site	PROSITE	PS00566	FIBRILLARIN	coord: 167..181
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 67..295

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0253791.1	Cmc09g0253791.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000494	box C/D RNA 3'-end processing
biological_process	GO:1990258	histone glutamine methylation
biological_process	GO:0051321	meiotic cell cycle
biological_process	GO:0007020	microtubule nucleation
biological_process	GO:0000278	mitotic cell cycle
biological_process	GO:0031167	rRNA methylation
biological_process	GO:0051225	spindle assembly
biological_process	GO:0006364	rRNA processing
biological_process	GO:0031122	cytoplasmic microtubule organization
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000922	spindle pole
cellular_component	GO:0032040	small-subunit processome
cellular_component	GO:0000930	gamma-tubulin complex
cellular_component	GO:0005874	microtubule
cellular_component	GO:0000923	equatorial microtubule organizing center
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0031428	box C/D RNP complex
molecular_function	GO:0043015	gamma-tubulin binding
molecular_function	GO:1990259	histone-glutamine methyltransferase activity
molecular_function	GO:0051011	microtubule minus-end binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008649	rRNA methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity