Cmc09g0253031 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0253031
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic
Location	CMiso1.1chr09: 19041345 .. 19043360 (-)
RNA-Seq Expression	Cmc09g0253031
Synteny	Cmc09g0253031

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGGCCATAGACAAAGATAAGGAAGAAAGATAAGAGAGAAAGAGAGAGAAGAAAAATTATCGTATGAATTATGATTTAGTTATTGAAAGAGTACTGAACAGAGCTTTTGATGAACATGAACTGCTGCAGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACTCTTTTCCCTTCTCTCTCTTCTCCCTTTAAGCTTCACAATTTGAATATTTTGCCTTCCAATTCAAACCCCAAAAATGTATATATATATATATATATATCTCTCTCTCTCTCTAACTCTCTGTTTCTCTCTCTGAACATTGTTTTTTCTTTTTTGCTAATGGGTGTAGTTTGAGATAGTCGGAAGTATCAAAGAAGAAGATCCCATTGGGTATCTTGATAAAAAGAAAACAAGTTTAGCTCTTCAACTTGCTGCCTTTTTAGCCACTGTAAGCCAACTTTCTTCCCCCATTTTTAAAAACCTCAATATGCTGAATTAACTAACTATTGTTGGATTATCTAATTAATATATGTATATAGTTTTGGGGGGTAATATATGTTGTTTGAAATAACAGGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGACAACAACCATGAAGTTCCTTTAACATGGGTTTTGGCACAATTAGGCTTTGTTGGATTCTTTTACTTCCTTGTCTTTCCTGTAAGTATAGAATTTAATTAATTTTCCCATATTCTTTCTCTAAATTACTTATGAATTAATTAAGTTAACTTCAAAAGTGAACGTTTTAAATTTAATTTTAATTAATCATGTATTTGTTATTGCAGCCGATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATATCCAATTCATGTGTGTCTTCCTCTTCTTCCCTGGGTAAGTAACTATTAAGTTCTTACATCTATAGGTATTACAAATCATTTTTCTCATATACCAGTTAAGCGTTCAAAAATTAGCCAAGTTGAGTCATGAATGTTTAAGATTAGGAAGAAAATACAGAAAGTTCTAACATTTGCGTGAGTTTTTTAGCCATCAAATAATTCTAGAGAACTAAAACAGTATAAAGAGCTCAAAGAATGTATATTTTGATTTTTAGGAAATATTGTTTCGTAATTGTTATCAGTTGCTAGCTATGTTATCGTTGCATGTCAAAGTTGTCAAGATAATCTTATTTACAAATCTAAGTACACACAACTGATCCAAGAGACATGAACCACTTTTTACTACCGACCGGCCTATCAGTCAGCTTCCACAAAGGTCGGTCTTCGCCACATATGGAAGTTTCAAGGGTTGGCTCAGTCCCTCTCTGTCGTCACAACGTCCCACGCAGGCGTGTAGAGCATTGTGGCCAACCTTATGGGCTGGCTCAAACTAGCTCCTAGGGTCAACCTCCATGAGATTTTATGTCTTTATGGTTAATCATATCTCATTTTATCTCATCCTTTCCAATAGTCGGTCTTTAGAGTGGCACTCAAGTAGACATATTATCTCTCAGACACCTCAACTGATCGAGTTTTCACTCCTAACATAGACTGGTCTCCAACAATTTAAGACATATTTGTGACTGTCAAAATCACTTCCAAACCTGCTCGTAAATTGAAAGTTGACGTTTGTTTAATTTGCAGAATTCTATTATGGGCGCCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCAACACCTCAAGACCCATCTCAGATAAAAAATGCATACTTGAAATACCCATTTGCTAAGCCTGAAGATTATGATTGGTAACCGTCGTCTGCAAAAATTCCTCTTCCAAAGGCTCAACCTTTTTCCTTCAAATTCATGAATGAAAATTAATATATACTTTGTTGTAATCTTGTATAATCCACATCATCCAAGAAAATATATCAGTCTTGTTTCTTTGATTGCTCACTACATTATGTGTTGAATACATATGATAATTAATATGCTAGCAGATATGAATATACATCTATACAT

mRNA sequence

GTGGCCATAGACAAAGATAAGGAAGAAAGATAAGAGAGAAAGAGAGAGAAGAAAAATTATCGTATGAATTATGATTTAGTTATTGAAAGAGTACTGAACAGAGCTTTTGATGAACATGAACTGCTGCAGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACTCTTTTCCCTTCTCTCTCTTCTCCCTTTAAGCTTCACAATTTGAATATTTTGCCTTCCAATTCAAACCCCAAAAATTTTGAGATAGTCGGAAGTATCAAAGAAGAAGATCCCATTGGGTATCTTGATAAAAAGAAAACAAGTTTAGCTCTTCAACTTGCTGCCTTTTTAGCCACTGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGACAACAACCATGAAGTTCCTTTAACATGGGTTTTGGCACAATTAGGCTTTGTTGGATTCTTTTACTTCCTTGTCTTTCCTCCGATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATATCCAATTCATGTGTGTCTTCCTCTTCTTCCCTGGAATTCTATTATGGGCGCCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCAACACCTCAAGACCCATCTCAGATAAAAAATGCATACTTGAAATACCCATTTGCTAAGCCTGAAGATTATGATTGGTAACCGTCGTCTGCAAAAATTCCTCTTCCAAAGGCTCAACCTTTTTCCTTCAAATTCATGAATGAAAATTAATATATACTTTGTTGTAATCTTGTATAATCCACATCATCCAAGAAAATATATCAGTCTTGTTTCTTTGATTGCTCACTACATTATGTGTTGAATACATATGATAATTAATATGCTAGCAGATATGAATATACATCTATACAT

Coding sequence (CDS)

ATGAACATGAACTGCTGCAGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACTCTTTTCCCTTCTCTCTCTTCTCCCTTTAAGCTTCACAATTTGAATATTTTGCCTTCCAATTCAAACCCCAAAAATTTTGAGATAGTCGGAAGTATCAAAGAAGAAGATCCCATTGGGTATCTTGATAAAAAGAAAACAAGTTTAGCTCTTCAACTTGCTGCCTTTTTAGCCACTGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGACAACAACCATGAAGTTCCTTTAACATGGGTTTTGGCACAATTAGGCTTTGTTGGATTCTTTTACTTCCTTGTCTTTCCTCCGATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAACTTGTTGGAAATGTATATCCAATTCATGTGTGTCTTCCTCTTCTTCCCTGGAATTCTATTATGGGCGCCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCAACACCTCAAGACCCATCTCAGATAAAAAATGCATACTTGAAATACCCATTTGCTAAGCCTGAAGATTATGATTGGTAA

Protein sequence

MNMNCCSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIKNAYLKYPFAKPEDYDW

Homology

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BLAST of Cmc09g0253031 vs. NCBI nr
Match: KAA0046329.1 (NAD(P)H-quinone oxidoreductase subunit L [Cucumis melo var. makuwa] >TYK30492.1 NAD(P)H-quinone oxidoreductase subunit L [Cucumis melo var. makuwa])

HSP 1 Score: 410.6 bits (1054), Expect = 7.8e-111
Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 3   MNCCSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP 62
           MNCC IGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP
Sbjct: 1   MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP 60

Query: 63  IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI 122
           IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI
Sbjct: 61  IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI 120

Query: 123 IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 182
           IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS
Sbjct: 121 IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 180

Query: 183 QIKNAYLKYPFAKPEDYDW 202
           QIKNAYLKYPFAKPEDYDW
Sbjct: 181 QIKNAYLKYPFAKPEDYDW 199

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BLAST of Cmc09g0253031 vs. NCBI nr
Match: XP_004150114.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Cucumis sativus])

HSP 1 Score: 396.7 bits (1018), Expect = 1.2e-106
Identity = 190/201 (94.53%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MNMNCCSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEE 60
           MNM CCSIGLLHIPKALPSLSSSKTLFPSL SPFKLHN NILPSNSNPKNF+IVGSIKEE
Sbjct: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60

Query: 61  DPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFP 120
           DPIGYL KKKTSLAL LAAFLATVGEPASAVTG+NNHEVPLTWVLAQLG +GFFYFLVFP
Sbjct: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120

Query: 121 PIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180
           PIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD
Sbjct: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180

Query: 181 PSQIKNAYLKYPFAKPEDYDW 202
           PS+IKNAYLKYPFAKPEDYDW
Sbjct: 181 PSKIKNAYLKYPFAKPEDYDW 201

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BLAST of Cmc09g0253031 vs. NCBI nr
Match: KAE8648604.1 (hypothetical protein Csa_008632 [Cucumis sativus])

HSP 1 Score: 392.5 bits (1007), Expect = 2.2e-105
Identity = 189/200 (94.50%), Postives = 194/200 (97.00%), Query Frame = 0


Query: 1   MNMNCCSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEE 60
           MNM CCSIGLLHIPKALPSLSSSKTLFPSL SPFKLHN NILPSNSNPKNF+IVGSIKEE
Sbjct: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60

Query: 61  DPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFP 120
           DPIGYL KKKTSLAL LAAFLATVGEPASAVTG+NNHEVPLTWVLAQLG +GFFYFLVFP
Sbjct: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120

Query: 121 PIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180
           PIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD
Sbjct: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180

Query: 181 PSQIKNAYLKYPFAKPEDYD 201
           PS+IKNAYLKYPFAKPEDYD
Sbjct: 181 PSKIKNAYLKYPFAKPEDYD 200

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BLAST of Cmc09g0253031 vs. NCBI nr
Match: XP_038875378.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida])

HSP 1 Score: 357.8 bits (917), Expect = 6.0e-95
Identity = 177/196 (90.31%), Postives = 186/196 (94.90%), Query Frame = 0


Query: 6   CSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGY 65
           CS+G LHIPKALPSLSSSKTLFPSLSS FKLHNLN LPSNS  KNFE+VGSIK EDP+GY
Sbjct: 3   CSLG-LHIPKALPSLSSSKTLFPSLSSSFKLHNLN-LPSNSKLKNFEVVGSIK-EDPVGY 62

Query: 66  LDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMN 125
           L +KKTSLALQLAA LATVGE A+AVTG+NNHEVPLTW+LAQLG VGFFYFLVFPPIIMN
Sbjct: 63  LHQKKTSLALQLAAILATVGEAANAVTGENNHEVPLTWILAQLGIVGFFYFLVFPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIK 185
           WLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQ+PSQIK
Sbjct: 123 WLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIK 182

Query: 186 NAYLKYPFAKPEDYDW 202
           NAYLKYPFAKPEDYDW
Sbjct: 183 NAYLKYPFAKPEDYDW 195

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BLAST of Cmc09g0253031 vs. NCBI nr
Match: KAG6601873.1 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 325.5 bits (833), Expect = 3.3e-85
Identity = 161/196 (82.14%), Postives = 174/196 (88.78%), Query Frame = 0


Query: 6   CSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGY 65
           CS+G LHIPKALPSLSSSKT+ P LS+PFKL     LPSN    NF++V  I+ EDPIG+
Sbjct: 3   CSLG-LHIPKALPSLSSSKTISPFLSAPFKLLK---LPSNPTSINFQVVACIR-EDPIGF 62

Query: 66  LDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMN 125
           L +KKTSL+LQ AA LATV EPA+AVTGDNNHEVPLTW+LAQLG VGFFYFLVFPPIIMN
Sbjct: 63  LRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILAQLGIVGFFYFLVFPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIK 185
           WLRIRWYRRNLLEMY+QFMCVFL FPGILLWAPFLNFRKFPRDPSMKYPWSTPQ+PSQIK
Sbjct: 123 WLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIK 182

Query: 186 NAYLKYPFAKPEDYDW 202
           N YLKYPFAKPEDYDW
Sbjct: 183 NGYLKYPFAKPEDYDW 193

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BLAST of Cmc09g0253031 vs. ExPASy Swiss-Prot
Match: Q9CAC5 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhL PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 5.1e-49
Identity = 110/207 (53.14%), Postives = 131/207 (63.29%), Query Frame = 0


Query: 5   CCSIGLLHIPKALPSLSSSKTLFPSLSSPF-----------KLHNLNILPSNSNPKNFEI 64
           C S+G L+ P ALPSLS       S+ SPF            LHN+N        K  +I
Sbjct: 4   CGSLG-LYAPNALPSLSLKPR---SVKSPFCITSHTKPNDTLLHNVN----KMRAKACDI 63

Query: 65  VGSIKEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGF 124
           +G+            KKT LA QL A LAT+  PA A+TG NN +  L+ V+  +G +  
Sbjct: 64  LGA------------KKTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGIISV 123

Query: 125 FYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKY 184
           +YFLV PPIIMNWLR+RWYRR   EMY+QFM VF+FFPG+LLWAPFLNFRKFPRDP+MK 
Sbjct: 124 WYFLVMPPIIMNWLRVRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKN 183

Query: 185 PWSTPQDPSQIKNAYLKYPFAKPEDYD 201
           PW  P DP  IKN YLKYP+A PEDYD
Sbjct: 184 PWDKPTDPDSIKNVYLKYPYATPEDYD 189

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BLAST of Cmc09g0253031 vs. ExPASy Swiss-Prot
Match: Q8DKZ3 (NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strain BP-1) OX=197221 GN=ndhL PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06
Identity = 28/64 (43.75%), Postives = 35/64 (54.69%), Query Frame = 0


Query: 104 VLAQLGFVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFR 163
           VL   G +   Y LV P I+  +L  RWY  +  E    +  V  FFPG+LL APF+NFR
Sbjct: 9   VLGVYGALAGLYLLVVPAIVYAYLNARWYVASSFERAFMYFLVTFFFPGLLLLAPFINFR 68

Query: 164 KFPR 168
             PR
Sbjct: 69  PQPR 72

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BLAST of Cmc09g0253031 vs. ExPASy Swiss-Prot
Match: Q10W93 (NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS101) OX=203124 GN=ndhL PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 9.2e-06
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 0


Query: 115 YFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFR 164
           YFLV P I+  +L+ RWY  + +E    +  +FLFFPG+L+ +PFLNFR
Sbjct: 22  YFLVMPAIVYAYLKTRWYVVSSIERVFMYFLMFLFFPGMLVLSPFLNFR 70

[Close]

BLAST of Cmc09g0253031 vs. ExPASy Swiss-Prot
Match: Q7V897 (NAD(P)H-quinone oxidoreductase subunit L OS=Prochlorococcus marinus (strain MIT 9313) OX=74547 GN=ndhL PE=3 SV=2)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 104 VLAQLGFVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFR 163
           VLA    +G  Y +V P ++ +W+  RW+     E    +  VFLFFPG++L+APFLN R
Sbjct: 17  VLAAYALLGGLYLIVVPLLLYSWMNRRWHCMGKFERLSAYGLVFLFFPGLILFAPFLNLR 76

[Close]

BLAST of Cmc09g0253031 vs. ExPASy Swiss-Prot
Match: Q7U620 (NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) OX=84588 GN=ndhL PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.6e-05
Identity = 25/60 (41.67%), Postives = 36/60 (60.00%), Query Frame = 0


Query: 104 VLAQLGFVGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFR 163
           V+     +G  Y LV P  +  W+  RW R   +E  + +  VFLFFPG++++APFLNFR
Sbjct: 17  VILAYALLGGLYLLVVPLALFFWMNSRWTRMGKIERLLVYGLVFLFFPGMVVFAPFLNFR 76

[Close]

BLAST of Cmc09g0253031 vs. ExPASy TrEMBL
Match: A0A5D3E3M5 (NAD(P)H-quinone oxidoreductase subunit L OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold426G00350 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 3.8e-111
Identity = 198/199 (99.50%), Postives = 198/199 (99.50%), Query Frame = 0


Query: 3   MNCCSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP 62
           MNCC IGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP
Sbjct: 1   MNCCGIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDP 60

Query: 63  IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI 122
           IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI
Sbjct: 61  IGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPI 120

Query: 123 IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 182
           IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS
Sbjct: 121 IMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 180

Query: 183 QIKNAYLKYPFAKPEDYDW 202
           QIKNAYLKYPFAKPEDYDW
Sbjct: 181 QIKNAYLKYPFAKPEDYDW 199

[Close]

BLAST of Cmc09g0253031 vs. ExPASy TrEMBL
Match: A0A0A0KSV9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569340 PE=4 SV=1)

HSP 1 Score: 396.7 bits (1018), Expect = 5.6e-107
Identity = 190/201 (94.53%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MNMNCCSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEE 60
           MNM CCSIGLLHIPKALPSLSSSKTLFPSL SPFKLHN NILPSNSNPKNF+IVGSIKEE
Sbjct: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60

Query: 61  DPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFP 120
           DPIGYL KKKTSLAL LAAFLATVGEPASAVTG+NNHEVPLTWVLAQLG +GFFYFLVFP
Sbjct: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120

Query: 121 PIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180
           PIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD
Sbjct: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180

Query: 181 PSQIKNAYLKYPFAKPEDYDW 202
           PS+IKNAYLKYPFAKPEDYDW
Sbjct: 181 PSKIKNAYLKYPFAKPEDYDW 201

[Close]

BLAST of Cmc09g0253031 vs. ExPASy TrEMBL
Match: A0A6J1GNR4 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456098 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.8e-84
Identity = 159/196 (81.12%), Postives = 173/196 (88.27%), Query Frame = 0


Query: 6   CSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGY 65
           CS+G LHIPKALPSLSSSKT+ P LS+PFKL     LPSN    +F++V  I+ EDPIG+
Sbjct: 3   CSLG-LHIPKALPSLSSSKTISPFLSAPFKLLK---LPSNPTSISFQVVACIR-EDPIGF 62

Query: 66  LDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMN 125
           L +KKTSL+LQ AA LATV EPA+AVTGDNNHEVPLTW+L QLG VGFFYFLVFPPIIMN
Sbjct: 63  LRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIK 185
           WLRIRWYRRNLLEMY+QFMCVFL FPGILLWAPFLNFRKFPRDPSMKYPWSTPQ+PSQIK
Sbjct: 123 WLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIK 182

Query: 186 NAYLKYPFAKPEDYDW 202
           N YLKYPFAKPEDYDW
Sbjct: 183 NGYLKYPFAKPEDYDW 193

[Close]

BLAST of Cmc09g0253031 vs. ExPASy TrEMBL
Match: A0A6J1DZB7 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025670 PE=4 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 6.7e-84
Identity = 160/204 (78.43%), Postives = 178/204 (87.25%), Query Frame = 0


Query: 1   MNMNCCSIGL-LHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNP--KNFEIVGSI 60
           MNM CC +GL LHIP+ALPSLSSS++LFPSLSS  KL     LPSNS P  KNF+ V SI
Sbjct: 1   MNMRCC-LGLGLHIPRALPSLSSSQSLFPSLSSISKLQK---LPSNSTPNNKNFQAVASI 60

Query: 61  KEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFL 120
             EDPI  + +KK SLA Q+AA LAT+GEPA+AVTGDNNHEVPL+W+L QLG VGFFYFL
Sbjct: 61  -SEDPIANVHQKKPSLAFQVAALLATIGEPANAVTGDNNHEVPLSWILTQLGIVGFFYFL 120

Query: 121 VFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWST 180
           VFPPIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGIL+WAPFLNFRK PRDPS+KYPW+T
Sbjct: 121 VFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILVWAPFLNFRKLPRDPSLKYPWAT 180

Query: 181 PQDPSQIKNAYLKYPFAKPEDYDW 202
           P+DPSQ+KNAYLKYPFAKPEDYDW
Sbjct: 181 PEDPSQVKNAYLKYPFAKPEDYDW 199

[Close]

BLAST of Cmc09g0253031 vs. ExPASy TrEMBL
Match: A0A6J1GQ77 (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456098 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 158/196 (80.61%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 6   CSIGLLHIPKALPSLSSSKTLFPSLSSPFKLHNLNILPSNSNPKNFEIVGSIKEEDPIGY 65
           CS+G LHIPKALPSLSSSKT+ P LS+PFKL     L   SNP +  +V  I+ EDPIG+
Sbjct: 3   CSLG-LHIPKALPSLSSSKTISPFLSAPFKL-----LKLPSNPTSISVVACIR-EDPIGF 62

Query: 66  LDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGFFYFLVFPPIIMN 125
           L +KKTSL+LQ AA LATV EPA+AVTGDNNHEVPLTW+L QLG VGFFYFLVFPPIIMN
Sbjct: 63  LRQKKTSLSLQFAALLATVAEPATAVTGDNNHEVPLTWILTQLGIVGFFYFLVFPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSQIK 185
           WLRIRWYRRNLLEMY+QFMCVFL FPGILLWAPFLNFRKFPRDPSMKYPWSTPQ+PSQIK
Sbjct: 123 WLRIRWYRRNLLEMYVQFMCVFLCFPGILLWAPFLNFRKFPRDPSMKYPWSTPQEPSQIK 182

Query: 186 NAYLKYPFAKPEDYDW 202
           N YLKYPFAKPEDYDW
Sbjct: 183 NGYLKYPFAKPEDYDW 191

[Close]

BLAST of Cmc09g0253031 vs. TAIR 10
Match: AT1G70760.1 (inorganic carbon transport protein-related )

HSP 1 Score: 195.7 bits (496), Expect = 3.7e-50
Identity = 110/207 (53.14%), Postives = 131/207 (63.29%), Query Frame = 0


Query: 5   CCSIGLLHIPKALPSLSSSKTLFPSLSSPF-----------KLHNLNILPSNSNPKNFEI 64
           C S+G L+ P ALPSLS       S+ SPF            LHN+N        K  +I
Sbjct: 4   CGSLG-LYAPNALPSLSLKPR---SVKSPFCITSHTKPNDTLLHNVN----KMRAKACDI 63

Query: 65  VGSIKEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGFVGF 124
           +G+            KKT LA QL A LAT+  PA A+TG NN +  L+ V+  +G +  
Sbjct: 64  LGA------------KKTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGIISV 123

Query: 125 FYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKY 184
           +YFLV PPIIMNWLR+RWYRR   EMY+QFM VF+FFPG+LLWAPFLNFRKFPRDP+MK 
Sbjct: 124 WYFLVMPPIIMNWLRVRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKN 183

Query: 185 PWSTPQDPSQIKNAYLKYPFAKPEDYD 201
           PW  P DP  IKN YLKYP+A PEDYD
Sbjct: 184 PWDKPTDPDSIKNVYLKYPYATPEDYD 189

The following BLAST results are available for this feature:

BLAST of Cmc09g0253031 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046329.1	7.8e-111	99.50	NAD(P)H-quinone oxidoreductase subunit L [Cucumis melo var. makuwa] >TYK30492.1 ...	[more]
XP_004150114.1	1.2e-106	94.53	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Cucumis sativus]	[more]
KAE8648604.1	2.2e-105	94.50	hypothetical protein Csa_008632 [Cucumis sativus]	[more]
XP_038875378.1	6.0e-95	90.31	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Benincasa hispida]	[more]
KAG6601873.1	3.3e-85	82.14	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic, partial [Cucurbita argy...	[more]

BLAST of Cmc09g0253031 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CAC5	5.1e-49	53.14	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana ...	[more]
Q8DKZ3	9.2e-06	43.75	NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strai...	[more]
Q10W93	9.2e-06	48.98	NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS...	[more]
Q7V897	1.6e-05	41.67	NAD(P)H-quinone oxidoreductase subunit L OS=Prochlorococcus marinus (strain MIT ...	[more]
Q7U620	1.6e-05	41.67	NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) OX...	[more]

BLAST of Cmc09g0253031 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E3M5	3.8e-111	99.50	NAD(P)H-quinone oxidoreductase subunit L OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A0A0KSV9	5.6e-107	94.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G569340 PE=4 SV=1	[more]
A0A6J1GNR4	1.8e-84	81.12	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Cucurbita ...	[more]
A0A6J1DZB7	6.7e-84	78.43	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X1 OS=Momordica ...	[more]
A0A6J1GQ77	1.1e-83	80.61	NAD(P)H-quinone oxidoreductase subunit L, chloroplastic isoform X2 OS=Cucurbita ...	[more]

BLAST of Cmc09g0253031 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70760.1	3.7e-50	53.14	inorganic carbon transport protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019654	NAD(P)H-quinone oxidoreductase subunit L	PFAM	PF10716	NdhL	coord: 96..168 e-value: 5.3E-29 score: 100.0
None	No IPR available	PANTHER	PTHR36727	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT L, CHLOROPLASTIC	coord: 6..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0253031.1	Cmc09g0253031.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding