Cmc09g0251861 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0251861
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr09: 17892310 .. 17892624 (+)
RNA-Seq Expression	Cmc09g0251861
Synteny	Cmc09g0251861

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAGAGTACATATGATCATTCTGTTTTTTATCGCCGATCTGATAATGGTATAGTTTTACTGATTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATCAGGTATTTCATACCTTAAAACTTTCCTTCAGGGTCAGCTTCACACGAAAGATTTGGGTCAATTGAAATATTTTTTAGGCATTGAAGTGATGAGAAGTAAGAAATGTATCTATTTGTCTCAACGAAAATGTGTGCTTGATTTGTTGTCTGAGAGAGGAAAATTAGGAGCCAAACTAAGTGGTACTCTGATGATGTCGAATCAGTAA

mRNA sequence

ATGCAAAAGAGTACATATGATCATTCTGTTTTTTATCGCCGATCTGATAATGGTATAGTTTTACTGATTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATCAGGTATTTCATACCTTAAAACTTTCCTTCAGGGTCAGCTTCACACGAAAGATTTGGGTCAATTGAAATATTTTTTAGGCATTGAAGTGATGAGAAGTAAGAAATGTATCTATTTGTCTCAACGAAAATGTGTGCTTGATTTGTTGTCTGAGAGAGGAAAATTAGGAGCCAAACTAAGTGGTACTCTGATGATGTCGAATCAGTAA

Coding sequence (CDS)

ATGCAAAAGAGTACATATGATCATTCTGTTTTTTATCGCCGATCTGATAATGGTATAGTTTTACTGATTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATCAGGTATTTCATACCTTAAAACTTTCCTTCAGGGTCAGCTTCACACGAAAGATTTGGGTCAATTGAAATATTTTTTAGGCATTGAAGTGATGAGAAGTAAGAAATGTATCTATTTGTCTCAACGAAAATGTGTGCTTGATTTGTTGTCTGAGAGAGGAAAATTAGGAGCCAAACTAAGTGGTACTCTGATGATGTCGAATCAGTAA

Protein sequence

MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKYFLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSNQ

Homology

[Close]

BLAST of Cmc09g0251861 vs. NCBI nr
Match: TYK05415.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.2 bits (448), Expect = 7.5e-41
Identity = 91/104 (87.50%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
           MQ STYDHSVFYRRSDNGIVLL+VYVDD VITGNDA GIS LKTFLQG  HTKD+GQLKY
Sbjct: 74  MQNSTYDHSVFYRRSDNGIVLLVVYVDDTVITGNDAWGISSLKTFLQGHFHTKDMGQLKY 133

Query: 61  FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSNQ 105
           FLGIEVMRSKKCIYLSQRK VLDLLSE  KLGAK SGTLMM NQ
Sbjct: 134 FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQ 177

[Close]

BLAST of Cmc09g0251861 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38
Identity = 89/104 (85.58%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1    MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
            M+KST DHSVFYRRS+ GIVLL+VYVDDIVITGNDA GIS LKTFLQGQ +TKDLGQLKY
Sbjct: 1007 MKKSTSDHSVFYRRSEKGIVLLVVYVDDIVITGNDALGISSLKTFLQGQFYTKDLGQLKY 1066

Query: 61   FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSNQ 105
            FLGIEVMRSKK IYLSQRK VLDLLSE GKLGAK SGT MM NQ
Sbjct: 1067 FLGIEVMRSKKGIYLSQRKYVLDLLSETGKLGAKPSGTPMMPNQ 1110

[Close]

BLAST of Cmc09g0251861 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38
Identity = 89/104 (85.58%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
           M+KST DHSVFYRRS+ GIVLL+VYVDDIVITGNDA GIS LKTFLQGQ +TKDLGQLKY
Sbjct: 630 MKKSTSDHSVFYRRSEKGIVLLVVYVDDIVITGNDALGISSLKTFLQGQFYTKDLGQLKY 689

Query: 61  FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSNQ 105
           FLGIEVMRSKK IYLSQRK VLDLLSE GKLGAK SGT MM NQ
Sbjct: 690 FLGIEVMRSKKGIYLSQRKYVLDLLSETGKLGAKPSGTPMMPNQ 733

[Close]

BLAST of Cmc09g0251861 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38
Identity = 89/104 (85.58%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1    MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
            M+KST DHSVFYRRS+ GIVLL+VYVDDIVITGNDA GIS LKTFLQGQ +TKDLGQLKY
Sbjct: 1022 MKKSTSDHSVFYRRSEKGIVLLVVYVDDIVITGNDALGISSLKTFLQGQFYTKDLGQLKY 1081

Query: 61   FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSNQ 105
            FLGIEVMRSKK IYLSQRK VLDLLSE GKLGAK SGT MM NQ
Sbjct: 1082 FLGIEVMRSKKGIYLSQRKYVLDLLSETGKLGAKPSGTPMMPNQ 1125

[Close]

BLAST of Cmc09g0251861 vs. NCBI nr
Match: XP_031744755.1 (uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 2.7e-38
Identity = 89/104 (85.58%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1    MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
            M+KST DHSVFYRRS+ GIVLL+VYVDDIVITGNDA GIS LKTFLQGQ +TKDLGQLKY
Sbjct: 974  MKKSTSDHSVFYRRSEKGIVLLVVYVDDIVITGNDALGISSLKTFLQGQFYTKDLGQLKY 1033

Query: 61   FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSNQ 105
            FLGIEVMRSKK IYLSQRK VLDLLSE GKLGAK SGT MM NQ
Sbjct: 1034 FLGIEVMRSKKGIYLSQRKYVLDLLSETGKLGAKPSGTPMMPNQ 1077

[Close]

BLAST of Cmc09g0251861 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-10
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 0


Query: 4    STYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKYFLG 63
            S  D S+F  +    IV ++VYVDDI+ITGND + +      L  +   KD  +L YFLG
Sbjct: 1129 SVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLG 1188

Query: 64   IEVMRSKKCIYLSQRKCVLDLLSERGKLGAK 95
            IE  R    ++LSQR+ +LDLL+    + AK
Sbjct: 1189 IEAKRVPTGLHLSQRRYILDLLARTNMITAK 1219

[Close]

BLAST of Cmc09g0251861 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.2e-10
Identity = 39/100 (39.00%), Postives = 56/100 (56.00%), Query Frame = 0


Query: 4    STYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKYFLG 63
            S  D S+F  +    I+ ++VYVDDI+ITGND   + +    L  +   K+   L YFLG
Sbjct: 1112 SISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLG 1171

Query: 64   IEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSN 104
            IE  R  + ++LSQR+  LDLL+    L AK   T M ++
Sbjct: 1172 IEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATS 1211

[Close]

BLAST of Cmc09g0251861 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 7.3e-07
Identity = 36/110 (32.73%), Postives = 62/110 (56.36%), Query Frame = 0


Query: 3    KSTYDHSVFYRR-SDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKYF 62
            K+  D  V+++R S+N  ++L++YVDD++I G D   I+ LK  L      KDLG  +  
Sbjct: 985  KTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQI 1044

Query: 63   LGIEVMRSK--KCIYLSQRKCVLDLLSERGKLGAK-----LSGTLMMSNQ 105
            LG++++R +  + ++LSQ K +  +L       AK     L+G L +S +
Sbjct: 1045 LGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKK 1094

[Close]

BLAST of Cmc09g0251861 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 8.1e-06
Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 22 LIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKYFLGIEVMRSKKCIYLSQRKCV 81
          L++YVDDI++TG+  + ++ L   L      KDLG + YFLGI++      ++LSQ K  
Sbjct: 3  LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 82 LDLLSERGKLGAKLSGT 99
            +L+  G L  K   T
Sbjct: 63 EQILNNAGMLDCKPMST 79

[Close]

BLAST of Cmc09g0251861 vs. ExPASy TrEMBL
Match: A0A5D3C204 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001030 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.6e-41
Identity = 91/104 (87.50%), Postives = 93/104 (89.42%), Query Frame = 0


Query: 1   MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
           MQ STYDHSVFYRRSDNGIVLL+VYVDD VITGNDA GIS LKTFLQG  HTKD+GQLKY
Sbjct: 74  MQNSTYDHSVFYRRSDNGIVLLVVYVDDTVITGNDAWGISSLKTFLQGHFHTKDMGQLKY 133

Query: 61  FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSNQ 105
           FLGIEVMRSKKCIYLSQRK VLDLLSE  KLGAK SGTLMM NQ
Sbjct: 134 FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQ 177

[Close]

BLAST of Cmc09g0251861 vs. ExPASy TrEMBL
Match: A0A6P6VCZ7 (uncharacterized protein LOC113719488 OS=Coffea arabica OX=13443 GN=LOC113719488 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.3e-30
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 1   MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
           MQKS  DHS+FYR S+ GI+LL+VYVDDIVITG+D+SGIS LK+FL  Q +TKDLG LKY
Sbjct: 1   MQKSKSDHSIFYRHSNGGIILLVVYVDDIVITGSDSSGISSLKSFLHTQFYTKDLGMLKY 60

Query: 61  FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSN 104
           FLG+EV  SKK I+LSQRK VLDLLSE G LGAK   T M+ N
Sbjct: 61  FLGVEVSTSKKGIFLSQRKYVLDLLSESGNLGAKPCSTPMVPN 103

[Close]

BLAST of Cmc09g0251861 vs. ExPASy TrEMBL
Match: A0A438GE68 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_1854 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 70/103 (67.96%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 1   MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
           M KS  DHSVFYR+S NGI+LLI+YVDDIVITGND +GIS LK F+  + HTKDLG+LKY
Sbjct: 338 MNKSKVDHSVFYRQSANGIILLIIYVDDIVITGNDCAGISSLKLFMHSKFHTKDLGELKY 397

Query: 61  FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSN 104
           FLG+EV RSK+ I+LSQRK VLDLL+E GK+ AK   T M+ N
Sbjct: 398 FLGVEVSRSKRGIFLSQRKYVLDLLAETGKMEAKPCSTPMIPN 440

[Close]

BLAST of Cmc09g0251861 vs. ExPASy TrEMBL
Match: A0A6J1DFP5 (uncharacterized protein LOC111020391 OS=Momordica charantia OX=3673 GN=LOC111020391 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 1.1e-29
Identity = 70/103 (67.96%), Postives = 85/103 (82.52%), Query Frame = 0


Query: 1   MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
           M+KS  +HSVFY++S++G++LL+VYVDDIVITGND+SGI  LK+FL  Q HTKDLG LKY
Sbjct: 1   MKKSKSNHSVFYKKSESGVILLVVYVDDIVITGNDSSGILSLKSFLHSQFHTKDLGMLKY 60

Query: 61  FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSN 104
           FLGIEV R+KK I+LSQRK VLDLL+E GKL AK   T M+ N
Sbjct: 61  FLGIEVTRNKKGIFLSQRKYVLDLLTETGKLAAKPRSTPMIPN 103

[Close]

BLAST of Cmc09g0251861 vs. ExPASy TrEMBL
Match: A0A438IV86 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=29760 GN=RE1_3294 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 3.2e-29
Identity = 69/103 (66.99%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MQKSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKY 60
           M KS  DHS+FY++S  GI+LL+VYVDDIVITGND +GIS LK F+  + HTKDLG+LKY
Sbjct: 418 MNKSEKDHSIFYKKSAAGIILLVVYVDDIVITGNDHAGISNLKAFMHSKFHTKDLGELKY 477

Query: 61  FLGIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLMMSN 104
           FLGIEV RSKK ++LSQRKCVLDLL E GK+ AK   T M+ N
Sbjct: 478 FLGIEVSRSKKGMFLSQRKCVLDLLKETGKIEAKPCTTPMVPN 520

[Close]

BLAST of Cmc09g0251861 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 76.3 bits (186), Expect = 1.7e-14
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 3   KSTYDHSVFYRRSDNGIVLLIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKYFL 62
           +S  DH+ F + +    + ++VYVDDI+I  N+ + +  LK+ L+     +DLG LKYFL
Sbjct: 261 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 320

Query: 63  GIEVMRSKKCIYLSQRKCVLDLLSERGKLGAKLSGTLM 101
           G+E+ RS   I + QRK  LDLL E G LG K S   M
Sbjct: 321 GLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPM 358

[Close]

BLAST of Cmc09g0251861 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 51.2 bits (121), Expect = 5.8e-07
Identity = 28/77 (36.36%), Postives = 43/77 (55.84%), Query Frame = 0


Query: 22 LIVYVDDIVITGNDASGISYLKTFLQGQLHTKDLGQLKYFLGIEVMRSKKCIYLSQRKCV 81
          L++YVDDI++TG+  + ++ L   L      KDLG + YFLGI++      ++LSQ K  
Sbjct: 3  LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 82 LDLLSERGKLGAKLSGT 99
            +L+  G L  K   T
Sbjct: 63 EQILNNAGMLDCKPMST 79

The following BLAST results are available for this feature:

BLAST of Cmc09g0251861 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05415.1	7.5e-41	87.50	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
XP_031744754.1	2.7e-38	85.58	uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]	[more]
XP_031744758.1	2.7e-38	85.58	uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]	[more]
XP_031744753.1	2.7e-38	85.58	uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]	[more]
XP_031744755.1	2.7e-38	85.58	uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]	[more]

BLAST of Cmc09g0251861 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.9e-10	41.76	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.2e-10	39.00	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	7.3e-07	32.73	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P92519	8.1e-06	36.36	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Cmc09g0251861 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C204	3.6e-41	87.50	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6P6VCZ7	8.3e-30	69.90	uncharacterized protein LOC113719488 OS=Coffea arabica OX=13443 GN=LOC113719488 ...	[more]
A0A438GE68	1.1e-29	67.96	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]
A0A6J1DFP5	1.1e-29	67.96	uncharacterized protein LOC111020391 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A438IV86	3.2e-29	66.99	Retrovirus-related Pol polyprotein from transposon RE1 OS=Vitis vinifera OX=2976...	[more]

BLAST of Cmc09g0251861 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.7e-14	42.86	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	5.8e-07	36.36	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 2..85 e-value: 2.0E-13 score: 50.5
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 23..104
None	No IPR available	PANTHER	PTHR11439:SF344	SUBFAMILY NOT NAMED	coord: 23..104
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 14..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0251861.1	Cmc09g0251861.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding