Homology
BLAST of Cmc09g0249491 vs. NCBI nr
Match:
KAA0066164.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK15206.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 862.1 bits (2226), Expect = 2.5e-246
Identity = 436/437 (99.77%), Postives = 436/437 (99.77%), Query Frame = 0
Query: 71 REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE 130
REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE
Sbjct: 413 REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE 472
Query: 131 TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 190
TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG
Sbjct: 473 TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 532
Query: 191 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 250
DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW
Sbjct: 533 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 592
Query: 251 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 310
TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA
Sbjct: 593 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 652
Query: 311 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL 370
IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL
Sbjct: 653 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL 712
Query: 371 KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN 430
KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN
Sbjct: 713 KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN 772
Query: 431 FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKL 490
FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTP ATHVKL
Sbjct: 773 FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL 832
Query: 491 TKDTESSEVDHKLYRSI 508
TKDTESSEVDHKLYRSI
Sbjct: 833 TKDTESSEVDHKLYRSI 849
BLAST of Cmc09g0249491 vs. NCBI nr
Match:
TYJ98791.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 768.5 bits (1983), Expect = 3.8e-218
Identity = 394/448 (87.95%), Postives = 410/448 (91.52%), Query Frame = 0
Query: 33 RVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYSQN 92
RVTIRS TVTL+ELWKDRK NVKYFHVFGSTCYILADREY +KWDAKSEQGIFLGYSQN
Sbjct: 479 RVTIRSGMTVTLHELWKDRKPNVKYFHVFGSTCYILADREYRQKWDAKSEQGIFLGYSQN 538
Query: 93 SRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGKPS 152
SRAYRVFNNR VMETINVVIND++ AIKQINDEEDE NMSEARTTSSV+ KA PS
Sbjct: 539 SRAYRVFNNRYKSVMETINVVINDIDSAIKQINDEEDEIPNMSEARTTSSVKVTKADNPS 598
Query: 153 DDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMVAD 212
DDS K LEKS +E+ITKK ELIS AHVKKNHPASSIIGDPS GMQTRRKEKIDYMKMVAD
Sbjct: 599 DDSGKILEKSPEENITKKSELISFAHVKKNHPASSIIGDPSAGMQTRRKEKIDYMKMVAD 658
Query: 213 LCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKT 272
LCYIST EPSTVD +LRDEY LNAMQEELLQF++NNVWTLV KPEGVNVIGTKWVFKNKT
Sbjct: 659 LCYISTFEPSTVDFSLRDEYLLNAMQEELLQFKRNNVWTLVLKPEGVNVIGTKWVFKNKT 718
Query: 273 DEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKS 332
DEAGCVTKNKA+LVAQGYTQVEGIDFDETF+ VARLEAIRLLLGISCIQKFKLYQMDVKS
Sbjct: 719 DEAGCVTKNKARLVAQGYTQVEGIDFDETFSPVARLEAIRLLLGISCIQKFKLYQMDVKS 778
Query: 333 AFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSR 392
AFL+GYLNEEVYVAQPK FVDSEH KH+YKLNKALYGLKQA RAWYD+LTVYLRGKGYSR
Sbjct: 779 AFLNGYLNEEVYVAQPKDFVDSEHSKHVYKLNKALYGLKQAPRAWYDRLTVYLRGKGYSR 838
Query: 393 GEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFI-----EFEMSMVGELSCFLG 452
GEIDKTLFI RKSDQLLVAQIYVDDIIF GFP LVNNFI EFEMSMVGELSCFLG
Sbjct: 839 GEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVLVNNFIYVMQSEFEMSMVGELSCFLG 898
Query: 453 LQIKQKNDDIFISQEKYARNMVKKFGLE 476
LQIKQKNDDIFISQEKYARNMVKKFG +
Sbjct: 899 LQIKQKNDDIFISQEKYARNMVKKFGYQ 926
BLAST of Cmc09g0249491 vs. NCBI nr
Match:
TYK29237.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 704.9 bits (1818), Expect = 5.1e-199
Identity = 366/463 (79.05%), Postives = 391/463 (84.45%), Query Frame = 0
Query: 31 HNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYS 90
H RVTIR+ TTVTLYELWK+RK NVKYFHVFGSTCYILADREY +KWDA+SEQGIFLGYS
Sbjct: 396 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 455
Query: 91 QNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGK 150
QN+ AYRV+NNRS VMETINVVINDL IKQ+NDEEDET NMSE RTTS+VE KA
Sbjct: 456 QNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 515
Query: 151 PSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMV 210
SD KSL+KSS+E I KK +LISSAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMV
Sbjct: 516 SSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 575
Query: 211 ADLCYISTVEPSTVD-SALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFK 270
ADLCYIS++E STVD SA +DEYWLNAMQEELL+ R NNVW LV KP GVNVIGTKW+FK
Sbjct: 576 ADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFK 635
Query: 271 NKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMD 330
NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMD
Sbjct: 636 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 695
Query: 331 VKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKG 390
VKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYGLKQA AWYD+LTVYLRG+G
Sbjct: 696 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRG 755
Query: 391 YSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQ 450
YSRGEIDKTLFI KSDQLLVAQIYVDDIIF GFP L
Sbjct: 756 YSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGL---------------------- 815
Query: 451 IKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTK 493
QKNDDIFISQEKYA+NMVKKFGLE ARNKRTP HVKL K
Sbjct: 816 --QKNDDIFISQEKYAKNMVKKFGLEHARNKRTPAMIHVKLQK 833
BLAST of Cmc09g0249491 vs. NCBI nr
Match:
KAA0035157.1 (gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 701.0 bits (1808), Expect = 7.4e-198
Identity = 367/488 (75.20%), Postives = 393/488 (80.53%), Query Frame = 0
Query: 31 HNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYS 90
H RVTIR+ TTVTLYELWK+RK NVKYFHVFGSTCYILADREY +KWDA+SEQGIFLGYS
Sbjct: 410 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 469
Query: 91 QNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGK 150
QN+ AYRV+NNRS VMETINVVINDL+ IKQ+NDEEDET NMSE RTTS+VE KA
Sbjct: 470 QNNWAYRVYNNRSDSVMETINVVINDLDSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 529
Query: 151 PSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMV 210
SD KSL+KS +E I KK +LI SAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMV
Sbjct: 530 SSDSLGKSLKKSLEEIINKKSKLIPSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 589
Query: 211 ADLCYISTVEPSTVD-SALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFK 270
ADLCYIST+E STVD SAL+DEYWLNAMQEELLQFR+NNVW LV KP GVNVIGTKW+FK
Sbjct: 590 ADLCYISTIEHSTVDHSALKDEYWLNAMQEELLQFRRNNVWMLVLKPVGVNVIGTKWIFK 649
Query: 271 NKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMD 330
NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMD
Sbjct: 650 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 709
Query: 331 VKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKG 390
VKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYGLKQA AWYD+LTVYLRG+G
Sbjct: 710 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRG 769
Query: 391 YSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQ 450
YSRGEIDKTLFI KSDQLLV QIYVDDIIF GFP L
Sbjct: 770 YSRGEIDKTLFIDSKSDQLLVTQIYVDDIIFGGFPQGL---------------------- 829
Query: 451 IKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVDHKLYRSIVG 510
ARNKRTP HVKLTKDTE +EVDHKLYRSIVG
Sbjct: 830 ---------------------------ARNKRTPAMIHVKLTKDTEGAEVDHKLYRSIVG 848
Query: 511 SLLYITAS 518
SLLY+TAS
Sbjct: 890 SLLYLTAS 848
BLAST of Cmc09g0249491 vs. NCBI nr
Match:
KAA0053137.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01543.1 gag-pol polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 698.0 bits (1800), Expect = 6.3e-197
Identity = 359/501 (71.66%), Postives = 390/501 (77.84%), Query Frame = 0
Query: 22 ESVNIACHIHNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKS 81
E+VN ACHIHNRV IR+ TT+TLYELWK+RK NVKYFHVFGSTCY+LADREYH+KWDA+S
Sbjct: 311 EAVNNACHIHNRVVIRTGTTITLYELWKERKPNVKYFHVFGSTCYVLADREYHQKWDARS 370
Query: 82 EQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTS 141
EQGIFLGYSQN+RAY+V+NN+SG VMETINVVINDL+ IKQ+NDEED+T NM E R
Sbjct: 371 EQGIFLGYSQNNRAYKVYNNKSGSVMETINVVINDLDSNIKQMNDEEDKTLNMYEVR--- 430
Query: 142 SVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRK 201
Sbjct: 431 ------------------------------------------------------------ 490
Query: 202 EKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNV 261
T++SAL+DEYWLN MQEELLQFR+NNVWTL+SKPEGVNV
Sbjct: 491 ---------------------TMNSALKDEYWLNTMQEELLQFRRNNVWTLLSKPEGVNV 550
Query: 262 IGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQ 321
IGTKW+FKNKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQ
Sbjct: 551 IGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQ 610
Query: 322 KFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQL 381
KFKLYQ+DVKS FL+GYLNEEVYVAQPKGFVDSEHPKH+YKLNKALYGLKQA RAWYD+L
Sbjct: 611 KFKLYQIDVKSTFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRL 670
Query: 382 TVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFI-----EFEM 441
TVYLRG+GYSRGEIDK LFI RKSDQLLVAQIYVDDIIF GFP DL+NNFI EFEM
Sbjct: 671 TVYLRGRGYSRGEIDKILFIHRKSDQLLVAQIYVDDIIFGGFPLDLINNFINIMQSEFEM 727
Query: 442 SMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTES 501
SMVGELSCFLGLQIKQKND IFISQEKYARNMVKKFGL+QARNKRTP ATHVKLTKDTE
Sbjct: 731 SMVGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLKQARNKRTPAATHVKLTKDTEG 727
Query: 502 SEVDHKLYRSIVGSLLYITAS 518
+EVDHKLYRSIVGSLLY+TAS
Sbjct: 791 AEVDHKLYRSIVGSLLYLTAS 727
BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 220.7 bits (561), Expect = 3.8e-56
Identity = 172/605 (28.43%), Postives = 297/605 (49.09%), Query Frame = 0
Query: 2 LQEMARVMIHAKNLPLCFWAESVNIACHIHNRVTIRS--ETTVTLYELWKDRKSNVKYFH 61
+ E AR M+ L FW E+V A ++ NR+ R+ +++ T YE+W ++K +K+
Sbjct: 592 ITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLR 651
Query: 62 VFGSTCYILADREYHKKWDAKSEQGIFLGYSQNS-RAYRVFNNR----SGCVMETINVVI 121
VFG+T Y+ + K+D KS + IF+GY N + + N + V++ N+V
Sbjct: 652 VFGATVYVHI-KNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVN 711
Query: 122 N---DLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGKPSD------------------ 181
+ E + + E + + +++R EFP K D
Sbjct: 712 SRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPN 771
Query: 182 DSRKSLE----------------KSSKES-------------------------ITKKLE 241
DSRK ++ K SKES + E
Sbjct: 772 DSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRE 831
Query: 242 LISSAHVKK---NHPASS----IIGDPSTGMQTR-----RKEKIDYMKMVADLCYISTVE 301
++ H+K+ ++P + II S ++T+ +E K+V + I
Sbjct: 832 SETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDV 891
Query: 302 PSTVDS-ALRDE--YWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKTDEAGC 361
P++ D RD+ W A+ EL + NN WT+ +PE N++ ++WVF K +E G
Sbjct: 892 PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 951
Query: 362 VTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDG 421
+ KA+LVA+G+TQ ID++ETFA VAR+ + R +L + K++QMDVK+AFL+G
Sbjct: 952 PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNG 1011
Query: 422 YLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDK 481
L EE+Y+ P+G S + ++ KLNKA+YGLKQA+R W++ L+ + +D+
Sbjct: 1012 TLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDR 1071
Query: 482 TLFIQRKS--DQLLVAQIYVDDIIFRGFPHDLVNNF-----IEFEMSMVGELSCFLGLQI 515
++I K ++ + +YVDD++ +NNF +F M+ + E+ F+G++I
Sbjct: 1072 CIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI 1131
BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 214.9 bits (546), Expect = 2.1e-54
Identity = 154/543 (28.36%), Postives = 268/543 (49.36%), Query Frame = 0
Query: 4 EMARVMIHAKNLPLCFWAESVNIACHIHNRVTIRSETTVTLYEL----WKDRKSNVKYFH 63
E R M+ LP FW E+V AC++ N RS + +E+ W +++ + +
Sbjct: 594 EKVRSMLRMAKLPKSFWGEAVQTACYLIN----RSPSVPLAFEIPERVWTNKEVSYSHLK 653
Query: 64 VFGSTCYILADREYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEP 123
VFG + +E K D KS IF+GY YR+++ V+ + +VV + E
Sbjct: 654 VFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE- 713
Query: 124 AIKQINDEEDETSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKE-----SITKKLELI 183
+ D + + + V P + + ++ S++ + ++ E +
Sbjct: 714 ----VRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQL 773
Query: 184 SSAHVKKNHPASS------IIGDPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSAL 243
+ HP + +++RR +Y+ + D EP ++ L
Sbjct: 774 DEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDR------EPESLKEVL 833
Query: 244 ---RDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKL 303
+ AMQEE+ ++N + LV P+G + KWVFK K D + + KA+L
Sbjct: 834 SHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARL 893
Query: 304 VAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYV 363
V +G+ Q +GIDFDE F+ V ++ +IR +L ++ ++ Q+DVK+AFL G L EE+Y+
Sbjct: 894 VVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYM 953
Query: 364 AQPKGFVDSEHPKHMY-KLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRK 423
QP+GF + KHM KLNK+LYGLKQA R WY + +++ + Y + D ++ +R
Sbjct: 954 EQPEGF-EVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRF 1013
Query: 424 SD-QLLVAQIYVDDIIFRGFPHDLVNNF-----IEFEMSMVGELSCFLGLQI--KQKNDD 483
S+ ++ +YVDD++ G L+ F+M +G LG++I ++ +
Sbjct: 1014 SENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRK 1073
Query: 484 IFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVDHK------LYRSIVGS 514
+++SQEKY ++++F ++ A+ TP+A H+KL+K + V+ K Y S VGS
Sbjct: 1074 LWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGS 1120
BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 206.1 bits (523), Expect = 9.8e-52
Identity = 133/402 (33.08%), Postives = 213/402 (52.99%), Query Frame = 0
Query: 125 NDEEDETSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISS----AHVK 184
N ++ +N S ++ S+ P S S + SS S T LI A +
Sbjct: 857 NTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIV 916
Query: 185 KNHPASSIIGDPSTGMQTRRKEKI--DYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQ 244
N+ + + + M TR K I K + + EP T AL+DE W NAM
Sbjct: 917 NNNNQAPL---NTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMG 976
Query: 245 EELLQFRQNNVWTLVSKPEG-VNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGID 304
E+ N+ W LV P V ++G +W+F K + G + + KA+LVA+GY Q G+D
Sbjct: 977 SEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLD 1036
Query: 305 FDETFASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHP 364
+ ETF+ V + +IR++LG++ + + + Q+DV +AFL G L ++VY++QP GF+D + P
Sbjct: 1037 YAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRP 1096
Query: 365 KHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDD 424
++ KL KALYGLKQA RAWY +L YL G+ D +LF+ ++ ++ +YVDD
Sbjct: 1097 NYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDD 1156
Query: 425 IIFRGFPHDLVNNFIE-----FEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKF 484
I+ G L++N ++ F + EL FLG++ K+ + +SQ +Y +++ +
Sbjct: 1157 ILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLART 1216
Query: 485 GLEQARNKRTPVATHVKLTKDTESSEVDHKLYRSIVGSLLYI 515
+ A+ TP+A KL+ + + D YR IVGSL Y+
Sbjct: 1217 NMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYL 1255
BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 201.4 bits (511), Expect = 2.4e-50
Identity = 128/398 (32.16%), Postives = 206/398 (51.76%), Query Frame = 0
Query: 125 NDEEDETSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHP 184
N + N + S + P PS + SS + T L + A
Sbjct: 843 NSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVN 902
Query: 185 ASSIIGDPSTGMQTRRKEKI--DYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELL 244
A + + S M TR K+ I K + EP T A++D+ W AM E+
Sbjct: 903 AQAPVNTHS--MATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEIN 962
Query: 245 QFRQNNVWTLV-SKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDET 304
N+ W LV P V ++G +W+F K + G + + KA+LVA+GY Q G+D+ ET
Sbjct: 963 AQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAET 1022
Query: 305 FASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMY 364
F+ V + +IR++LG++ + + + Q+DV +AFL G L +EVY++QP GFVD + P ++
Sbjct: 1023 FSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVC 1082
Query: 365 KLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFR 424
+L KA+YGLKQA RAWY +L YL G+ D +LF+ ++ ++ +YVDDI+
Sbjct: 1083 RLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILIT 1142
Query: 425 GFPHDLVNNFIE-----FEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQ 484
G L+ + ++ F + +L FLG++ K+ + +SQ +Y +++ + +
Sbjct: 1143 GNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLT 1202
Query: 485 ARNKRTPVATHVKLTKDTESSEVDHKLYRSIVGSLLYI 515
A+ TP+AT KLT + + D YR IVGSL Y+
Sbjct: 1203 AKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYL 1238
BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match:
P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)
HSP 1 Score: 97.8 bits (242), Expect = 3.8e-19
Identity = 60/193 (31.09%), Postives = 101/193 (52.33%), Query Frame = 0
Query: 328 MDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRG 387
MDV +AFL+ ++E +YV QP GFV+ +P ++++L +YGLKQA W + + L+
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 388 KGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIE------FEMSMVGE 447
G+ R E + L+ + SD + +YVDD++ P + + ++ + M +G+
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAA-PSPKIYDRVKQELTKLYSMKDLGK 120
Query: 448 LSCFLGLQIKQ-KNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVD 507
+ FLGL I Q N DI +S + Y + + + +TP+ L + T D
Sbjct: 121 VDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD 180
Query: 508 HKLYRSIVGSLLY 514
Y+SIVG LL+
Sbjct: 181 ITPYQSIVGQLLF 192
BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match:
A0A5D3CXU0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00820 PE=4 SV=1)
HSP 1 Score: 862.1 bits (2226), Expect = 1.2e-246
Identity = 436/437 (99.77%), Postives = 436/437 (99.77%), Query Frame = 0
Query: 71 REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE 130
REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE
Sbjct: 413 REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE 472
Query: 131 TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 190
TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG
Sbjct: 473 TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 532
Query: 191 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 250
DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW
Sbjct: 533 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 592
Query: 251 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 310
TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA
Sbjct: 593 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 652
Query: 311 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL 370
IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL
Sbjct: 653 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL 712
Query: 371 KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN 430
KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN
Sbjct: 713 KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN 772
Query: 431 FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKL 490
FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTP ATHVKL
Sbjct: 773 FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL 832
Query: 491 TKDTESSEVDHKLYRSI 508
TKDTESSEVDHKLYRSI
Sbjct: 833 TKDTESSEVDHKLYRSI 849
BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match:
A0A5D3BJA9 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G001000 PE=4 SV=1)
HSP 1 Score: 768.5 bits (1983), Expect = 1.8e-218
Identity = 394/448 (87.95%), Postives = 410/448 (91.52%), Query Frame = 0
Query: 33 RVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYSQN 92
RVTIRS TVTL+ELWKDRK NVKYFHVFGSTCYILADREY +KWDAKSEQGIFLGYSQN
Sbjct: 479 RVTIRSGMTVTLHELWKDRKPNVKYFHVFGSTCYILADREYRQKWDAKSEQGIFLGYSQN 538
Query: 93 SRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGKPS 152
SRAYRVFNNR VMETINVVIND++ AIKQINDEEDE NMSEARTTSSV+ KA PS
Sbjct: 539 SRAYRVFNNRYKSVMETINVVINDIDSAIKQINDEEDEIPNMSEARTTSSVKVTKADNPS 598
Query: 153 DDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMVAD 212
DDS K LEKS +E+ITKK ELIS AHVKKNHPASSIIGDPS GMQTRRKEKIDYMKMVAD
Sbjct: 599 DDSGKILEKSPEENITKKSELISFAHVKKNHPASSIIGDPSAGMQTRRKEKIDYMKMVAD 658
Query: 213 LCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKT 272
LCYIST EPSTVD +LRDEY LNAMQEELLQF++NNVWTLV KPEGVNVIGTKWVFKNKT
Sbjct: 659 LCYISTFEPSTVDFSLRDEYLLNAMQEELLQFKRNNVWTLVLKPEGVNVIGTKWVFKNKT 718
Query: 273 DEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKS 332
DEAGCVTKNKA+LVAQGYTQVEGIDFDETF+ VARLEAIRLLLGISCIQKFKLYQMDVKS
Sbjct: 719 DEAGCVTKNKARLVAQGYTQVEGIDFDETFSPVARLEAIRLLLGISCIQKFKLYQMDVKS 778
Query: 333 AFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSR 392
AFL+GYLNEEVYVAQPK FVDSEH KH+YKLNKALYGLKQA RAWYD+LTVYLRGKGYSR
Sbjct: 779 AFLNGYLNEEVYVAQPKDFVDSEHSKHVYKLNKALYGLKQAPRAWYDRLTVYLRGKGYSR 838
Query: 393 GEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFI-----EFEMSMVGELSCFLG 452
GEIDKTLFI RKSDQLLVAQIYVDDIIF GFP LVNNFI EFEMSMVGELSCFLG
Sbjct: 839 GEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVLVNNFIYVMQSEFEMSMVGELSCFLG 898
Query: 453 LQIKQKNDDIFISQEKYARNMVKKFGLE 476
LQIKQKNDDIFISQEKYARNMVKKFG +
Sbjct: 899 LQIKQKNDDIFISQEKYARNMVKKFGYQ 926
BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match:
A0A5D3DZD2 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00280 PE=4 SV=1)
HSP 1 Score: 704.9 bits (1818), Expect = 2.5e-199
Identity = 366/463 (79.05%), Postives = 391/463 (84.45%), Query Frame = 0
Query: 31 HNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYS 90
H RVTIR+ TTVTLYELWK+RK NVKYFHVFGSTCYILADREY +KWDA+SEQGIFLGYS
Sbjct: 396 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 455
Query: 91 QNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGK 150
QN+ AYRV+NNRS VMETINVVINDL IKQ+NDEEDET NMSE RTTS+VE KA
Sbjct: 456 QNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 515
Query: 151 PSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMV 210
SD KSL+KSS+E I KK +LISSAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMV
Sbjct: 516 SSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 575
Query: 211 ADLCYISTVEPSTVD-SALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFK 270
ADLCYIS++E STVD SA +DEYWLNAMQEELL+ R NNVW LV KP GVNVIGTKW+FK
Sbjct: 576 ADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFK 635
Query: 271 NKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMD 330
NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMD
Sbjct: 636 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 695
Query: 331 VKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKG 390
VKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYGLKQA AWYD+LTVYLRG+G
Sbjct: 696 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRG 755
Query: 391 YSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQ 450
YSRGEIDKTLFI KSDQLLVAQIYVDDIIF GFP L
Sbjct: 756 YSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGL---------------------- 815
Query: 451 IKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTK 493
QKNDDIFISQEKYA+NMVKKFGLE ARNKRTP HVKL K
Sbjct: 816 --QKNDDIFISQEKYAKNMVKKFGLEHARNKRTPAMIHVKLQK 833
BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match:
A0A5A7T0Q0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002510 PE=4 SV=1)
HSP 1 Score: 701.0 bits (1808), Expect = 3.6e-198
Identity = 367/488 (75.20%), Postives = 393/488 (80.53%), Query Frame = 0
Query: 31 HNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYS 90
H RVTIR+ TTVTLYELWK+RK NVKYFHVFGSTCYILADREY +KWDA+SEQGIFLGYS
Sbjct: 410 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 469
Query: 91 QNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGK 150
QN+ AYRV+NNRS VMETINVVINDL+ IKQ+NDEEDET NMSE RTTS+VE KA
Sbjct: 470 QNNWAYRVYNNRSDSVMETINVVINDLDSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 529
Query: 151 PSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMV 210
SD KSL+KS +E I KK +LI SAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMV
Sbjct: 530 SSDSLGKSLKKSLEEIINKKSKLIPSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 589
Query: 211 ADLCYISTVEPSTVD-SALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFK 270
ADLCYIST+E STVD SAL+DEYWLNAMQEELLQFR+NNVW LV KP GVNVIGTKW+FK
Sbjct: 590 ADLCYISTIEHSTVDHSALKDEYWLNAMQEELLQFRRNNVWMLVLKPVGVNVIGTKWIFK 649
Query: 271 NKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMD 330
NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMD
Sbjct: 650 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 709
Query: 331 VKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKG 390
VKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYGLKQA AWYD+LTVYLRG+G
Sbjct: 710 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRG 769
Query: 391 YSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQ 450
YSRGEIDKTLFI KSDQLLV QIYVDDIIF GFP L
Sbjct: 770 YSRGEIDKTLFIDSKSDQLLVTQIYVDDIIFGGFPQGL---------------------- 829
Query: 451 IKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVDHKLYRSIVG 510
ARNKRTP HVKLTKDTE +EVDHKLYRSIVG
Sbjct: 830 ---------------------------ARNKRTPAMIHVKLTKDTEGAEVDHKLYRSIVG 848
Query: 511 SLLYITAS 518
SLLY+TAS
Sbjct: 890 SLLYLTAS 848
BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match:
A0A5D3BPB3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001130 PE=4 SV=1)
HSP 1 Score: 698.0 bits (1800), Expect = 3.0e-197
Identity = 359/501 (71.66%), Postives = 390/501 (77.84%), Query Frame = 0
Query: 22 ESVNIACHIHNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKS 81
E+VN ACHIHNRV IR+ TT+TLYELWK+RK NVKYFHVFGSTCY+LADREYH+KWDA+S
Sbjct: 311 EAVNNACHIHNRVVIRTGTTITLYELWKERKPNVKYFHVFGSTCYVLADREYHQKWDARS 370
Query: 82 EQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTS 141
EQGIFLGYSQN+RAY+V+NN+SG VMETINVVINDL+ IKQ+NDEED+T NM E R
Sbjct: 371 EQGIFLGYSQNNRAYKVYNNKSGSVMETINVVINDLDSNIKQMNDEEDKTLNMYEVR--- 430
Query: 142 SVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRK 201
Sbjct: 431 ------------------------------------------------------------ 490
Query: 202 EKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNV 261
T++SAL+DEYWLN MQEELLQFR+NNVWTL+SKPEGVNV
Sbjct: 491 ---------------------TMNSALKDEYWLNTMQEELLQFRRNNVWTLLSKPEGVNV 550
Query: 262 IGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQ 321
IGTKW+FKNKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQ
Sbjct: 551 IGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQ 610
Query: 322 KFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQL 381
KFKLYQ+DVKS FL+GYLNEEVYVAQPKGFVDSEHPKH+YKLNKALYGLKQA RAWYD+L
Sbjct: 611 KFKLYQIDVKSTFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRL 670
Query: 382 TVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFI-----EFEM 441
TVYLRG+GYSRGEIDK LFI RKSDQLLVAQIYVDDIIF GFP DL+NNFI EFEM
Sbjct: 671 TVYLRGRGYSRGEIDKILFIHRKSDQLLVAQIYVDDIIFGGFPLDLINNFINIMQSEFEM 727
Query: 442 SMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTES 501
SMVGELSCFLGLQIKQKND IFISQEKYARNMVKKFGL+QARNKRTP ATHVKLTKDTE
Sbjct: 731 SMVGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLKQARNKRTPAATHVKLTKDTEG 727
Query: 502 SEVDHKLYRSIVGSLLYITAS 518
+EVDHKLYRSIVGSLLY+TAS
Sbjct: 791 AEVDHKLYRSIVGSLLYLTAS 727
BLAST of Cmc09g0249491 vs. TAIR 10
Match:
AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )
HSP 1 Score: 193.7 bits (491), Expect = 3.6e-49
Identity = 131/393 (33.33%), Postives = 204/393 (51.91%), Query Frame = 0
Query: 132 SNMSEARTTSSVE-FPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 191
S+ + ++SS++ P A +D S+ S + T+K + + + AS I
Sbjct: 3 SDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRR--TRKPAYLQDYYC--HSVASLTIH 62
Query: 192 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 251
D S Q EK+ + +C EPST + A W AM +E+ + W
Sbjct: 63 DIS---QFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTW 122
Query: 252 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 311
+ + P IG KWV+K K + G + + KA+LVA+GYTQ EGIDF ETF+ V +L +
Sbjct: 123 EICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTS 182
Query: 312 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFV----DSEHPKHMYKLNKA 371
++L+L IS I F L+Q+D+ +AFL+G L+EE+Y+ P G+ DS P + L K+
Sbjct: 183 VKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKS 242
Query: 372 LYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHD 431
+YGLKQASR W+ + +V L G G+ + D T F++ + L +YVDDII
Sbjct: 243 IYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDA 302
Query: 432 LVNNFIE-----FEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKR 491
V+ F++ +G L FLGL+I + I I Q KYA +++ + GL +
Sbjct: 303 AVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSS 362
Query: 492 TPVATHVKLTKDTESSEVDHKLYRSIVGSLLYI 515
P+ V + + VD K YR ++G L+Y+
Sbjct: 363 VPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL 388
BLAST of Cmc09g0249491 vs. TAIR 10
Match:
ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )
HSP 1 Score: 94.4 bits (233), Expect = 2.9e-19
Identity = 52/125 (41.60%), Postives = 71/125 (56.80%), Query Frame = 0
Query: 196 MQTRRKEKIDYMKMVADLCYISTV--EPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLV 255
M TR K I+ + L +T+ EP +V AL+D W AMQEEL +N W LV
Sbjct: 1 MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60
Query: 256 SKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRL 315
P N++G KWVFK K G + + KA+LVA+G+ Q EGI F ET++ V R IR
Sbjct: 61 PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120
Query: 316 LLGIS 319
+L ++
Sbjct: 121 ILNVA 125
BLAST of Cmc09g0249491 vs. TAIR 10
Match:
ATMG00810.1 (DNA/RNA polymerases superfamily protein )
HSP 1 Score: 59.7 bits (143), Expect = 8.0e-09
Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 0
Query: 413 IYVDDIIFRGFPHDLVNNFI-----EFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARN 472
+YVDDI+ G + L+N I F M +G + FLG+QIK +F+SQ KYA
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 473 MVKKFGLEQARNKRTPVATHVKLTKDTESSEV-DHKLYRSIVGSLLYIT 516
++ G+ + TP+ +KL +++ D +RSIVG+L Y+T
Sbjct: 65 ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLT 111
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0066164.1 | 2.5e-246 | 99.77 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK15206.1 gag-pol polyprotein [... | [more] |
TYJ98791.1 | 3.8e-218 | 87.95 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
TYK29237.1 | 5.1e-199 | 79.05 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0035157.1 | 7.4e-198 | 75.20 | gag-pol polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0053137.1 | 6.3e-197 | 71.66 | gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01543.1 gag-pol polyprotein [... | [more] |
Match Name | E-value | Identity | Description | |
P04146 | 3.8e-56 | 28.43 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
P10978 | 2.1e-54 | 28.36 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
Q94HW2 | 9.8e-52 | 33.08 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 2.4e-50 | 32.16 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P25600 | 3.8e-19 | 31.09 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CXU0 | 1.2e-246 | 99.77 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G... | [more] |
A0A5D3BJA9 | 1.8e-218 | 87.95 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G... | [more] |
A0A5D3DZD2 | 2.5e-199 | 79.05 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228... | [more] |
A0A5A7T0Q0 | 3.6e-198 | 75.20 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G0... | [more] |
A0A5D3BPB3 | 3.0e-197 | 71.66 | Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G... | [more] |
Match Name | E-value | Identity | Description | |
AT4G23160.1 | 3.6e-49 | 33.33 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | [more] |
ATMG00820.1 | 2.9e-19 | 41.60 | Reverse transcriptase (RNA-dependent DNA polymerase) | [more] |
ATMG00810.1 | 8.0e-09 | 34.86 | DNA/RNA polymerases superfamily protein | [more] |