Cmc09g0249491 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0249491
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionGag-pol polyprotein
LocationCMiso1.1chr09: 15389327 .. 15390880 (+)
RNA-Seq ExpressionCmc09g0249491
SyntenyCmc09g0249491
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACAAGAAATGGCACGTGTTATGATACATGCCAAAAATTTACCTCTATGTTTTTGGGCAGAATCTGTAAATATTGCCTGTCACATTCATAACCGGGTAACTATAAGATCGGAAACAACTGTCACACTTTATGAACTTTGGAAAGATAGAAAGTCAAATGTTAAATACTTTCATGTGTTTGGAAGTACGTGTTATATCTTAGCTGACAGGGAATACCACAAGAAATGGGATGCTAAGTCAGAACAAGGAATTTTTCTCGGGTACTCTCAGAACAGCCGTGCCTATAGAGTCTTCAATAACAGATCTGGGTGTGTTATGGAAACAATCAATGTAGTTATAAATGACCTCGAACCAGCTATCAAACAGATAAATGATGAGGAAGATGAGACTTCAAATATGTCTGAAGCTAGAACTACTAGCAGTGTAGAATTTCCTAAAGCTGGTAAACCATCTGATGATTCCAGGAAAAGTTTGGAAAAATCATCAAAGGAAAGTATTACTAAGAAATTAGAACTAATTTCGTCTGCTCATGTGAAGAAAAATCATCCAGCAAGCTCTATTATAGGTGATCCGTCAACTGGGATGCAGACCAGAAGGAAAGAAAAGATTGATTACATGAAGATGGTTGCTGATTTATGCTATATTTCCACCGTTGAACCTTCTACTGTTGACTCTGCGCTCAGGGATGAGTACTGGTTAAATGCTATGCAAGAGGAGTTACTTCAATTCAGACAAAACAATGTCTGGACATTAGTGTCAAAACCAGAAGGTGTAAACGTTATCGGTACTAAATGGGTGTTCAAAAATAAAACTGATGAAGCCGGATGTGTGACGAAAAATAAAGCCAAATTAGTGGCTCAAGGGTATACTCAAGTTGAAGGTATTGACTTTGATGAAACGTTTGCTTCTGTTGCTCGACTTGAAGCCATTCGACTATTACTTGGTATATCATGCATACAGAAATTTAAATTGTATCAGATGGATGTCAAGAGTGCCTTCTTAGATGGGTACTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCCGAGCACCCGAAGCATATGTATAAGCTCAACAAAGCCTTATATGGACTAAAGCAAGCGTCGAGAGCTTGGTATGACCAGCTAACTGTATACTTGAGAGGTAAAGGATATTCCAGAGGAGAAATTGACAAGACTTTGTTCATACAAAGGAAATCTGACCAACTATTGGTGGCTCAAATTTATGTTGATGACATCATTTTTCGAGGATTTCCTCATGATCTAGTAAATAATTTCATTGAATTCGAAATGAGCATGGTTGGAGAGCTTTCATGCTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGACATTTTCATATCTCAAGAAAAGTATGCCAGGAATATGGTCAAAAAGTTTGGTTTAGAACAGGCTCGAAATAAGCGGACTCCAGTTGCGACACATGTTAAACTTACAAAAGACACTGAAAGTTCTGAAGTTGATCACAAACTTTACAGGAGTATAGTAGGCAGTCTATTATACATAACAGCAAGTTGA

mRNA sequence

ATGTTACAAGAAATGGCACGTGTTATGATACATGCCAAAAATTTACCTCTATGTTTTTGGGCAGAATCTGTAAATATTGCCTGTCACATTCATAACCGGGTAACTATAAGATCGGAAACAACTGTCACACTTTATGAACTTTGGAAAGATAGAAAGTCAAATGTTAAATACTTTCATGTGTTTGGAAGTACGTGTTATATCTTAGCTGACAGGGAATACCACAAGAAATGGGATGCTAAGTCAGAACAAGGAATTTTTCTCGGGTACTCTCAGAACAGCCGTGCCTATAGAGTCTTCAATAACAGATCTGGGTGTGTTATGGAAACAATCAATGTAGTTATAAATGACCTCGAACCAGCTATCAAACAGATAAATGATGAGGAAGATGAGACTTCAAATATGTCTGAAGCTAGAACTACTAGCAGTGTAGAATTTCCTAAAGCTGGTAAACCATCTGATGATTCCAGGAAAAGTTTGGAAAAATCATCAAAGGAAAGTATTACTAAGAAATTAGAACTAATTTCGTCTGCTCATGTGAAGAAAAATCATCCAGCAAGCTCTATTATAGGTGATCCGTCAACTGGGATGCAGACCAGAAGGAAAGAAAAGATTGATTACATGAAGATGGTTGCTGATTTATGCTATATTTCCACCGTTGAACCTTCTACTGTTGACTCTGCGCTCAGGGATGAGTACTGGTTAAATGCTATGCAAGAGGAGTTACTTCAATTCAGACAAAACAATGTCTGGACATTAGTGTCAAAACCAGAAGGTGTAAACGTTATCGGTACTAAATGGGTGTTCAAAAATAAAACTGATGAAGCCGGATGTGTGACGAAAAATAAAGCCAAATTAGTGGCTCAAGGGTATACTCAAGTTGAAGGTATTGACTTTGATGAAACGTTTGCTTCTGTTGCTCGACTTGAAGCCATTCGACTATTACTTGGTATATCATGCATACAGAAATTTAAATTGTATCAGATGGATGTCAAGAGTGCCTTCTTAGATGGGTACTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCCGAGCACCCGAAGCATATGTATAAGCTCAACAAAGCCTTATATGGACTAAAGCAAGCGTCGAGAGCTTGGTATGACCAGCTAACTGTATACTTGAGAGGTAAAGGATATTCCAGAGGAGAAATTGACAAGACTTTGTTCATACAAAGGAAATCTGACCAACTATTGGTGGCTCAAATTTATGTTGATGACATCATTTTTCGAGGATTTCCTCATGATCTAGTAAATAATTTCATTGAATTCGAAATGAGCATGGTTGGAGAGCTTTCATGCTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGACATTTTCATATCTCAAGAAAAGTATGCCAGGAATATGGTCAAAAAGTTTGGTTTAGAACAGGCTCGAAATAAGCGGACTCCAGTTGCGACACATGTTAAACTTACAAAAGACACTGAAAGTTCTGAAGTTGATCACAAACTTTACAGGAGTATAGTAGGCAGTCTATTATACATAACAGCAAGTTGA

Coding sequence (CDS)

ATGTTACAAGAAATGGCACGTGTTATGATACATGCCAAAAATTTACCTCTATGTTTTTGGGCAGAATCTGTAAATATTGCCTGTCACATTCATAACCGGGTAACTATAAGATCGGAAACAACTGTCACACTTTATGAACTTTGGAAAGATAGAAAGTCAAATGTTAAATACTTTCATGTGTTTGGAAGTACGTGTTATATCTTAGCTGACAGGGAATACCACAAGAAATGGGATGCTAAGTCAGAACAAGGAATTTTTCTCGGGTACTCTCAGAACAGCCGTGCCTATAGAGTCTTCAATAACAGATCTGGGTGTGTTATGGAAACAATCAATGTAGTTATAAATGACCTCGAACCAGCTATCAAACAGATAAATGATGAGGAAGATGAGACTTCAAATATGTCTGAAGCTAGAACTACTAGCAGTGTAGAATTTCCTAAAGCTGGTAAACCATCTGATGATTCCAGGAAAAGTTTGGAAAAATCATCAAAGGAAAGTATTACTAAGAAATTAGAACTAATTTCGTCTGCTCATGTGAAGAAAAATCATCCAGCAAGCTCTATTATAGGTGATCCGTCAACTGGGATGCAGACCAGAAGGAAAGAAAAGATTGATTACATGAAGATGGTTGCTGATTTATGCTATATTTCCACCGTTGAACCTTCTACTGTTGACTCTGCGCTCAGGGATGAGTACTGGTTAAATGCTATGCAAGAGGAGTTACTTCAATTCAGACAAAACAATGTCTGGACATTAGTGTCAAAACCAGAAGGTGTAAACGTTATCGGTACTAAATGGGTGTTCAAAAATAAAACTGATGAAGCCGGATGTGTGACGAAAAATAAAGCCAAATTAGTGGCTCAAGGGTATACTCAAGTTGAAGGTATTGACTTTGATGAAACGTTTGCTTCTGTTGCTCGACTTGAAGCCATTCGACTATTACTTGGTATATCATGCATACAGAAATTTAAATTGTATCAGATGGATGTCAAGAGTGCCTTCTTAGATGGGTACTTGAATGAGGAGGTTTATGTTGCTCAACCAAAAGGTTTTGTTGATTCCGAGCACCCGAAGCATATGTATAAGCTCAACAAAGCCTTATATGGACTAAAGCAAGCGTCGAGAGCTTGGTATGACCAGCTAACTGTATACTTGAGAGGTAAAGGATATTCCAGAGGAGAAATTGACAAGACTTTGTTCATACAAAGGAAATCTGACCAACTATTGGTGGCTCAAATTTATGTTGATGACATCATTTTTCGAGGATTTCCTCATGATCTAGTAAATAATTTCATTGAATTCGAAATGAGCATGGTTGGAGAGCTTTCATGCTTTCTGGGACTTCAAATTAAGCAAAAGAATGATGACATTTTCATATCTCAAGAAAAGTATGCCAGGAATATGGTCAAAAAGTTTGGTTTAGAACAGGCTCGAAATAAGCGGACTCCAGTTGCGACACATGTTAAACTTACAAAAGACACTGAAAGTTCTGAAGTTGATCACAAACTTTACAGGAGTATAGTAGGCAGTCTATTATACATAACAGCAAGTTGA

Protein sequence

MLQEMARVMIHAKNLPLCFWAESVNIACHIHNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVDHKLYRSIVGSLLYITAS
Homology
BLAST of Cmc09g0249491 vs. NCBI nr
Match: KAA0066164.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK15206.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 862.1 bits (2226), Expect = 2.5e-246
Identity = 436/437 (99.77%), Postives = 436/437 (99.77%), Query Frame = 0

Query: 71  REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE 130
           REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE
Sbjct: 413 REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE 472

Query: 131 TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 190
           TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG
Sbjct: 473 TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 532

Query: 191 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 250
           DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW
Sbjct: 533 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 592

Query: 251 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 310
           TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA
Sbjct: 593 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 652

Query: 311 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL 370
           IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL
Sbjct: 653 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL 712

Query: 371 KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN 430
           KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN
Sbjct: 713 KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN 772

Query: 431 FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKL 490
           FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTP ATHVKL
Sbjct: 773 FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL 832

Query: 491 TKDTESSEVDHKLYRSI 508
           TKDTESSEVDHKLYRSI
Sbjct: 833 TKDTESSEVDHKLYRSI 849

BLAST of Cmc09g0249491 vs. NCBI nr
Match: TYJ98791.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 768.5 bits (1983), Expect = 3.8e-218
Identity = 394/448 (87.95%), Postives = 410/448 (91.52%), Query Frame = 0

Query: 33  RVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYSQN 92
           RVTIRS  TVTL+ELWKDRK NVKYFHVFGSTCYILADREY +KWDAKSEQGIFLGYSQN
Sbjct: 479 RVTIRSGMTVTLHELWKDRKPNVKYFHVFGSTCYILADREYRQKWDAKSEQGIFLGYSQN 538

Query: 93  SRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGKPS 152
           SRAYRVFNNR   VMETINVVIND++ AIKQINDEEDE  NMSEARTTSSV+  KA  PS
Sbjct: 539 SRAYRVFNNRYKSVMETINVVINDIDSAIKQINDEEDEIPNMSEARTTSSVKVTKADNPS 598

Query: 153 DDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMVAD 212
           DDS K LEKS +E+ITKK ELIS AHVKKNHPASSIIGDPS GMQTRRKEKIDYMKMVAD
Sbjct: 599 DDSGKILEKSPEENITKKSELISFAHVKKNHPASSIIGDPSAGMQTRRKEKIDYMKMVAD 658

Query: 213 LCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKT 272
           LCYIST EPSTVD +LRDEY LNAMQEELLQF++NNVWTLV KPEGVNVIGTKWVFKNKT
Sbjct: 659 LCYISTFEPSTVDFSLRDEYLLNAMQEELLQFKRNNVWTLVLKPEGVNVIGTKWVFKNKT 718

Query: 273 DEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKS 332
           DEAGCVTKNKA+LVAQGYTQVEGIDFDETF+ VARLEAIRLLLGISCIQKFKLYQMDVKS
Sbjct: 719 DEAGCVTKNKARLVAQGYTQVEGIDFDETFSPVARLEAIRLLLGISCIQKFKLYQMDVKS 778

Query: 333 AFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSR 392
           AFL+GYLNEEVYVAQPK FVDSEH KH+YKLNKALYGLKQA RAWYD+LTVYLRGKGYSR
Sbjct: 779 AFLNGYLNEEVYVAQPKDFVDSEHSKHVYKLNKALYGLKQAPRAWYDRLTVYLRGKGYSR 838

Query: 393 GEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFI-----EFEMSMVGELSCFLG 452
           GEIDKTLFI RKSDQLLVAQIYVDDIIF GFP  LVNNFI     EFEMSMVGELSCFLG
Sbjct: 839 GEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVLVNNFIYVMQSEFEMSMVGELSCFLG 898

Query: 453 LQIKQKNDDIFISQEKYARNMVKKFGLE 476
           LQIKQKNDDIFISQEKYARNMVKKFG +
Sbjct: 899 LQIKQKNDDIFISQEKYARNMVKKFGYQ 926

BLAST of Cmc09g0249491 vs. NCBI nr
Match: TYK29237.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 704.9 bits (1818), Expect = 5.1e-199
Identity = 366/463 (79.05%), Postives = 391/463 (84.45%), Query Frame = 0

Query: 31  HNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYS 90
           H RVTIR+ TTVTLYELWK+RK NVKYFHVFGSTCYILADREY +KWDA+SEQGIFLGYS
Sbjct: 396 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 455

Query: 91  QNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGK 150
           QN+ AYRV+NNRS  VMETINVVINDL   IKQ+NDEEDET NMSE RTTS+VE  KA  
Sbjct: 456 QNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 515

Query: 151 PSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMV 210
            SD   KSL+KSS+E I KK +LISSAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMV
Sbjct: 516 SSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 575

Query: 211 ADLCYISTVEPSTVD-SALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFK 270
           ADLCYIS++E STVD SA +DEYWLNAMQEELL+ R NNVW LV KP GVNVIGTKW+FK
Sbjct: 576 ADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFK 635

Query: 271 NKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMD 330
           NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMD
Sbjct: 636 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 695

Query: 331 VKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKG 390
           VKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYGLKQA  AWYD+LTVYLRG+G
Sbjct: 696 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRG 755

Query: 391 YSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQ 450
           YSRGEIDKTLFI  KSDQLLVAQIYVDDIIF GFP  L                      
Sbjct: 756 YSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGL---------------------- 815

Query: 451 IKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTK 493
             QKNDDIFISQEKYA+NMVKKFGLE ARNKRTP   HVKL K
Sbjct: 816 --QKNDDIFISQEKYAKNMVKKFGLEHARNKRTPAMIHVKLQK 833

BLAST of Cmc09g0249491 vs. NCBI nr
Match: KAA0035157.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 701.0 bits (1808), Expect = 7.4e-198
Identity = 367/488 (75.20%), Postives = 393/488 (80.53%), Query Frame = 0

Query: 31  HNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYS 90
           H RVTIR+ TTVTLYELWK+RK NVKYFHVFGSTCYILADREY +KWDA+SEQGIFLGYS
Sbjct: 410 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 469

Query: 91  QNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGK 150
           QN+ AYRV+NNRS  VMETINVVINDL+  IKQ+NDEEDET NMSE RTTS+VE  KA  
Sbjct: 470 QNNWAYRVYNNRSDSVMETINVVINDLDSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 529

Query: 151 PSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMV 210
            SD   KSL+KS +E I KK +LI SAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMV
Sbjct: 530 SSDSLGKSLKKSLEEIINKKSKLIPSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 589

Query: 211 ADLCYISTVEPSTVD-SALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFK 270
           ADLCYIST+E STVD SAL+DEYWLNAMQEELLQFR+NNVW LV KP GVNVIGTKW+FK
Sbjct: 590 ADLCYISTIEHSTVDHSALKDEYWLNAMQEELLQFRRNNVWMLVLKPVGVNVIGTKWIFK 649

Query: 271 NKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMD 330
           NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMD
Sbjct: 650 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 709

Query: 331 VKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKG 390
           VKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYGLKQA  AWYD+LTVYLRG+G
Sbjct: 710 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRG 769

Query: 391 YSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQ 450
           YSRGEIDKTLFI  KSDQLLV QIYVDDIIF GFP  L                      
Sbjct: 770 YSRGEIDKTLFIDSKSDQLLVTQIYVDDIIFGGFPQGL---------------------- 829

Query: 451 IKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVDHKLYRSIVG 510
                                      ARNKRTP   HVKLTKDTE +EVDHKLYRSIVG
Sbjct: 830 ---------------------------ARNKRTPAMIHVKLTKDTEGAEVDHKLYRSIVG 848

Query: 511 SLLYITAS 518
           SLLY+TAS
Sbjct: 890 SLLYLTAS 848

BLAST of Cmc09g0249491 vs. NCBI nr
Match: KAA0053137.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01543.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 698.0 bits (1800), Expect = 6.3e-197
Identity = 359/501 (71.66%), Postives = 390/501 (77.84%), Query Frame = 0

Query: 22  ESVNIACHIHNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKS 81
           E+VN ACHIHNRV IR+ TT+TLYELWK+RK NVKYFHVFGSTCY+LADREYH+KWDA+S
Sbjct: 311 EAVNNACHIHNRVVIRTGTTITLYELWKERKPNVKYFHVFGSTCYVLADREYHQKWDARS 370

Query: 82  EQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTS 141
           EQGIFLGYSQN+RAY+V+NN+SG VMETINVVINDL+  IKQ+NDEED+T NM E R   
Sbjct: 371 EQGIFLGYSQNNRAYKVYNNKSGSVMETINVVINDLDSNIKQMNDEEDKTLNMYEVR--- 430

Query: 142 SVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRK 201
                                                                       
Sbjct: 431 ------------------------------------------------------------ 490

Query: 202 EKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNV 261
                                T++SAL+DEYWLN MQEELLQFR+NNVWTL+SKPEGVNV
Sbjct: 491 ---------------------TMNSALKDEYWLNTMQEELLQFRRNNVWTLLSKPEGVNV 550

Query: 262 IGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQ 321
           IGTKW+FKNKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQ
Sbjct: 551 IGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQ 610

Query: 322 KFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQL 381
           KFKLYQ+DVKS FL+GYLNEEVYVAQPKGFVDSEHPKH+YKLNKALYGLKQA RAWYD+L
Sbjct: 611 KFKLYQIDVKSTFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRL 670

Query: 382 TVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFI-----EFEM 441
           TVYLRG+GYSRGEIDK LFI RKSDQLLVAQIYVDDIIF GFP DL+NNFI     EFEM
Sbjct: 671 TVYLRGRGYSRGEIDKILFIHRKSDQLLVAQIYVDDIIFGGFPLDLINNFINIMQSEFEM 727

Query: 442 SMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTES 501
           SMVGELSCFLGLQIKQKND IFISQEKYARNMVKKFGL+QARNKRTP ATHVKLTKDTE 
Sbjct: 731 SMVGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLKQARNKRTPAATHVKLTKDTEG 727

Query: 502 SEVDHKLYRSIVGSLLYITAS 518
           +EVDHKLYRSIVGSLLY+TAS
Sbjct: 791 AEVDHKLYRSIVGSLLYLTAS 727

BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 220.7 bits (561), Expect = 3.8e-56
Identity = 172/605 (28.43%), Postives = 297/605 (49.09%), Query Frame = 0

Query: 2    LQEMARVMIHAKNLPLCFWAESVNIACHIHNRVTIRS--ETTVTLYELWKDRKSNVKYFH 61
            + E AR M+    L   FW E+V  A ++ NR+  R+  +++ T YE+W ++K  +K+  
Sbjct: 592  ITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLR 651

Query: 62   VFGSTCYILADREYHKKWDAKSEQGIFLGYSQNS-RAYRVFNNR----SGCVMETINVVI 121
            VFG+T Y+   +    K+D KS + IF+GY  N  + +   N +       V++  N+V 
Sbjct: 652  VFGATVYVHI-KNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIVARDVVVDETNMVN 711

Query: 122  N---DLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGKPSD------------------ 181
            +     E    + + E +  +  +++R     EFP   K  D                  
Sbjct: 712  SRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPN 771

Query: 182  DSRKSLE----------------KSSKES-------------------------ITKKLE 241
            DSRK ++                K SKES                           +  E
Sbjct: 772  DSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRE 831

Query: 242  LISSAHVKK---NHPASS----IIGDPSTGMQTR-----RKEKIDYMKMVADLCYISTVE 301
              ++ H+K+   ++P  +    II   S  ++T+      +E     K+V +   I    
Sbjct: 832  SETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFNDV 891

Query: 302  PSTVDS-ALRDE--YWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKTDEAGC 361
            P++ D    RD+   W  A+  EL   + NN WT+  +PE  N++ ++WVF  K +E G 
Sbjct: 892  PNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGN 951

Query: 362  VTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDG 421
              + KA+LVA+G+TQ   ID++ETFA VAR+ + R +L +      K++QMDVK+AFL+G
Sbjct: 952  PIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNG 1011

Query: 422  YLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDK 481
             L EE+Y+  P+G   S +  ++ KLNKA+YGLKQA+R W++     L+   +    +D+
Sbjct: 1012 TLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDR 1071

Query: 482  TLFIQRKS--DQLLVAQIYVDDIIFRGFPHDLVNNF-----IEFEMSMVGELSCFLGLQI 515
             ++I  K   ++ +   +YVDD++        +NNF      +F M+ + E+  F+G++I
Sbjct: 1072 CIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRI 1131

BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.1e-54
Identity = 154/543 (28.36%), Postives = 268/543 (49.36%), Query Frame = 0

Query: 4    EMARVMIHAKNLPLCFWAESVNIACHIHNRVTIRSETTVTLYEL----WKDRKSNVKYFH 63
            E  R M+    LP  FW E+V  AC++ N    RS +    +E+    W +++ +  +  
Sbjct: 594  EKVRSMLRMAKLPKSFWGEAVQTACYLIN----RSPSVPLAFEIPERVWTNKEVSYSHLK 653

Query: 64   VFGSTCYILADREYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEP 123
            VFG   +    +E   K D KS   IF+GY      YR+++     V+ + +VV  + E 
Sbjct: 654  VFGCRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESE- 713

Query: 124  AIKQINDEEDETSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKE-----SITKKLELI 183
                +    D +  +      + V  P        +  + ++ S++      + ++ E +
Sbjct: 714  ----VRTAADMSEKVKNGIIPNFVTIPSTSNNPTSAESTTDEVSEQGEQPGEVIEQGEQL 773

Query: 184  SSAHVKKNHPASS------IIGDPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSAL 243
                 +  HP         +       +++RR    +Y+ +  D       EP ++   L
Sbjct: 774  DEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDR------EPESLKEVL 833

Query: 244  ---RDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKL 303
                    + AMQEE+   ++N  + LV  P+G   +  KWVFK K D    + + KA+L
Sbjct: 834  SHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARL 893

Query: 304  VAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYV 363
            V +G+ Q +GIDFDE F+ V ++ +IR +L ++     ++ Q+DVK+AFL G L EE+Y+
Sbjct: 894  VVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYM 953

Query: 364  AQPKGFVDSEHPKHMY-KLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRK 423
             QP+GF +    KHM  KLNK+LYGLKQA R WY +   +++ + Y +   D  ++ +R 
Sbjct: 954  EQPEGF-EVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRF 1013

Query: 424  SD-QLLVAQIYVDDIIFRGFPHDLVNNF-----IEFEMSMVGELSCFLGLQI--KQKNDD 483
            S+   ++  +YVDD++  G    L+          F+M  +G     LG++I  ++ +  
Sbjct: 1014 SENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRK 1073

Query: 484  IFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVDHK------LYRSIVGS 514
            +++SQEKY   ++++F ++ A+   TP+A H+KL+K    + V+ K       Y S VGS
Sbjct: 1074 LWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGS 1120

BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 9.8e-52
Identity = 133/402 (33.08%), Postives = 213/402 (52.99%), Query Frame = 0

Query: 125  NDEEDETSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISS----AHVK 184
            N  ++  +N S ++   S+  P     S  S  +   SS  S T    LI      A + 
Sbjct: 857  NTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIV 916

Query: 185  KNHPASSIIGDPSTGMQTRRKEKI--DYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQ 244
             N+  + +    +  M TR K  I     K    +   +  EP T   AL+DE W NAM 
Sbjct: 917  NNNNQAPL---NTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMG 976

Query: 245  EELLQFRQNNVWTLVSKPEG-VNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGID 304
             E+     N+ W LV  P   V ++G +W+F  K +  G + + KA+LVA+GY Q  G+D
Sbjct: 977  SEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLD 1036

Query: 305  FDETFASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHP 364
            + ETF+ V +  +IR++LG++  + + + Q+DV +AFL G L ++VY++QP GF+D + P
Sbjct: 1037 YAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRP 1096

Query: 365  KHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDD 424
             ++ KL KALYGLKQA RAWY +L  YL   G+     D +LF+ ++   ++   +YVDD
Sbjct: 1097 NYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDD 1156

Query: 425  IIFRGFPHDLVNNFIE-----FEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKF 484
            I+  G    L++N ++     F +    EL  FLG++ K+    + +SQ +Y  +++ + 
Sbjct: 1157 ILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLART 1216

Query: 485  GLEQARNKRTPVATHVKLTKDTESSEVDHKLYRSIVGSLLYI 515
             +  A+   TP+A   KL+  + +   D   YR IVGSL Y+
Sbjct: 1217 NMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYL 1255

BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.4e-50
Identity = 128/398 (32.16%), Postives = 206/398 (51.76%), Query Frame = 0

Query: 125  NDEEDETSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHP 184
            N     + N +     S +  P    PS    +    SS  + T  L  +  A       
Sbjct: 843  NSPSPNSPNQNSPLPQSPISSPHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVN 902

Query: 185  ASSIIGDPSTGMQTRRKEKI--DYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELL 244
            A + +   S  M TR K+ I     K        +  EP T   A++D+ W  AM  E+ 
Sbjct: 903  AQAPVNTHS--MATRAKDGIRKPNQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEIN 962

Query: 245  QFRQNNVWTLV-SKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDET 304
                N+ W LV   P  V ++G +W+F  K +  G + + KA+LVA+GY Q  G+D+ ET
Sbjct: 963  AQIGNHTWDLVPPPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAET 1022

Query: 305  FASVARLEAIRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMY 364
            F+ V +  +IR++LG++  + + + Q+DV +AFL G L +EVY++QP GFVD + P ++ 
Sbjct: 1023 FSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVC 1082

Query: 365  KLNKALYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFR 424
            +L KA+YGLKQA RAWY +L  YL   G+     D +LF+ ++   ++   +YVDDI+  
Sbjct: 1083 RLRKAIYGLKQAPRAWYVELRTYLLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILIT 1142

Query: 425  GFPHDLVNNFIE-----FEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQ 484
            G    L+ + ++     F +    +L  FLG++ K+    + +SQ +Y  +++ +  +  
Sbjct: 1143 GNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLT 1202

Query: 485  ARNKRTPVATHVKLTKDTESSEVDHKLYRSIVGSLLYI 515
            A+   TP+AT  KLT  + +   D   YR IVGSL Y+
Sbjct: 1203 AKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYL 1238

BLAST of Cmc09g0249491 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 3.8e-19
Identity = 60/193 (31.09%), Postives = 101/193 (52.33%), Query Frame = 0

Query: 328 MDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRG 387
           MDV +AFL+  ++E +YV QP GFV+  +P ++++L   +YGLKQA   W + +   L+ 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 388 KGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIE------FEMSMVGE 447
            G+ R E +  L+ +  SD  +   +YVDD++    P   + + ++      + M  +G+
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAA-PSPKIYDRVKQELTKLYSMKDLGK 120

Query: 448 LSCFLGLQIKQ-KNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVD 507
           +  FLGL I Q  N DI +S + Y      +  +   +  +TP+     L + T     D
Sbjct: 121 VDKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKD 180

Query: 508 HKLYRSIVGSLLY 514
              Y+SIVG LL+
Sbjct: 181 ITPYQSIVGQLLF 192

BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match: A0A5D3CXU0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00820 PE=4 SV=1)

HSP 1 Score: 862.1 bits (2226), Expect = 1.2e-246
Identity = 436/437 (99.77%), Postives = 436/437 (99.77%), Query Frame = 0

Query: 71  REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE 130
           REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE
Sbjct: 413 REYHKKWDAKSEQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDE 472

Query: 131 TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 190
           TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG
Sbjct: 473 TSNMSEARTTSSVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 532

Query: 191 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 250
           DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW
Sbjct: 533 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 592

Query: 251 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 310
           TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA
Sbjct: 593 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 652

Query: 311 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL 370
           IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL
Sbjct: 653 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGL 712

Query: 371 KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN 430
           KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN
Sbjct: 713 KQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNN 772

Query: 431 FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKL 490
           FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTP ATHVKL
Sbjct: 773 FIEFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPAATHVKL 832

Query: 491 TKDTESSEVDHKLYRSI 508
           TKDTESSEVDHKLYRSI
Sbjct: 833 TKDTESSEVDHKLYRSI 849

BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match: A0A5D3BJA9 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G001000 PE=4 SV=1)

HSP 1 Score: 768.5 bits (1983), Expect = 1.8e-218
Identity = 394/448 (87.95%), Postives = 410/448 (91.52%), Query Frame = 0

Query: 33  RVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYSQN 92
           RVTIRS  TVTL+ELWKDRK NVKYFHVFGSTCYILADREY +KWDAKSEQGIFLGYSQN
Sbjct: 479 RVTIRSGMTVTLHELWKDRKPNVKYFHVFGSTCYILADREYRQKWDAKSEQGIFLGYSQN 538

Query: 93  SRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGKPS 152
           SRAYRVFNNR   VMETINVVIND++ AIKQINDEEDE  NMSEARTTSSV+  KA  PS
Sbjct: 539 SRAYRVFNNRYKSVMETINVVINDIDSAIKQINDEEDEIPNMSEARTTSSVKVTKADNPS 598

Query: 153 DDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMVAD 212
           DDS K LEKS +E+ITKK ELIS AHVKKNHPASSIIGDPS GMQTRRKEKIDYMKMVAD
Sbjct: 599 DDSGKILEKSPEENITKKSELISFAHVKKNHPASSIIGDPSAGMQTRRKEKIDYMKMVAD 658

Query: 213 LCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFKNKT 272
           LCYIST EPSTVD +LRDEY LNAMQEELLQF++NNVWTLV KPEGVNVIGTKWVFKNKT
Sbjct: 659 LCYISTFEPSTVDFSLRDEYLLNAMQEELLQFKRNNVWTLVLKPEGVNVIGTKWVFKNKT 718

Query: 273 DEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMDVKS 332
           DEAGCVTKNKA+LVAQGYTQVEGIDFDETF+ VARLEAIRLLLGISCIQKFKLYQMDVKS
Sbjct: 719 DEAGCVTKNKARLVAQGYTQVEGIDFDETFSPVARLEAIRLLLGISCIQKFKLYQMDVKS 778

Query: 333 AFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKGYSR 392
           AFL+GYLNEEVYVAQPK FVDSEH KH+YKLNKALYGLKQA RAWYD+LTVYLRGKGYSR
Sbjct: 779 AFLNGYLNEEVYVAQPKDFVDSEHSKHVYKLNKALYGLKQAPRAWYDRLTVYLRGKGYSR 838

Query: 393 GEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFI-----EFEMSMVGELSCFLG 452
           GEIDKTLFI RKSDQLLVAQIYVDDIIF GFP  LVNNFI     EFEMSMVGELSCFLG
Sbjct: 839 GEIDKTLFIHRKSDQLLVAQIYVDDIIFGGFPQVLVNNFIYVMQSEFEMSMVGELSCFLG 898

Query: 453 LQIKQKNDDIFISQEKYARNMVKKFGLE 476
           LQIKQKNDDIFISQEKYARNMVKKFG +
Sbjct: 899 LQIKQKNDDIFISQEKYARNMVKKFGYQ 926

BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match: A0A5D3DZD2 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228G00280 PE=4 SV=1)

HSP 1 Score: 704.9 bits (1818), Expect = 2.5e-199
Identity = 366/463 (79.05%), Postives = 391/463 (84.45%), Query Frame = 0

Query: 31  HNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYS 90
           H RVTIR+ TTVTLYELWK+RK NVKYFHVFGSTCYILADREY +KWDA+SEQGIFLGYS
Sbjct: 396 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 455

Query: 91  QNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGK 150
           QN+ AYRV+NNRS  VMETINVVINDL   IKQ+NDEEDET NMSE RTTS+VE  KA  
Sbjct: 456 QNNWAYRVYNNRSDSVMETINVVINDLNSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 515

Query: 151 PSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMV 210
            SD   KSL+KSS+E I KK +LISSAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMV
Sbjct: 516 SSDSPEKSLKKSSEEIINKKSKLISSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 575

Query: 211 ADLCYISTVEPSTVD-SALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFK 270
           ADLCYIS++E STVD SA +DEYWLNAMQEELL+ R NNVW LV KP GVNVIGTKW+FK
Sbjct: 576 ADLCYISSIEHSTVDHSAFKDEYWLNAMQEELLKLR-NNVWMLVLKPVGVNVIGTKWIFK 635

Query: 271 NKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMD 330
           NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMD
Sbjct: 636 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 695

Query: 331 VKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKG 390
           VKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYGLKQA  AWYD+LTVYLRG+G
Sbjct: 696 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRG 755

Query: 391 YSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQ 450
           YSRGEIDKTLFI  KSDQLLVAQIYVDDIIF GFP  L                      
Sbjct: 756 YSRGEIDKTLFIDSKSDQLLVAQIYVDDIIFGGFPQGL---------------------- 815

Query: 451 IKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTK 493
             QKNDDIFISQEKYA+NMVKKFGLE ARNKRTP   HVKL K
Sbjct: 816 --QKNDDIFISQEKYAKNMVKKFGLEHARNKRTPAMIHVKLQK 833

BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match: A0A5A7T0Q0 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002510 PE=4 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 3.6e-198
Identity = 367/488 (75.20%), Postives = 393/488 (80.53%), Query Frame = 0

Query: 31  HNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKSEQGIFLGYS 90
           H RVTIR+ TTVTLYELWK+RK NVKYFHVFGSTCYILADREY +KWDA+SEQGIFLGYS
Sbjct: 410 HIRVTIRTGTTVTLYELWKERKPNVKYFHVFGSTCYILADREYRQKWDARSEQGIFLGYS 469

Query: 91  QNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTSSVEFPKAGK 150
           QN+ AYRV+NNRS  VMETINVVINDL+  IKQ+NDEEDET NMSE RTTS+VE  KA  
Sbjct: 470 QNNWAYRVYNNRSDSVMETINVVINDLDSDIKQMNDEEDETPNMSEVRTTSTVEESKADN 529

Query: 151 PSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRKEKIDYMKMV 210
            SD   KSL+KS +E I KK +LI SAHVKKNHPASSIIGDPS GMQTRRK+KIDY+KMV
Sbjct: 530 SSDSLGKSLKKSLEEIINKKSKLIPSAHVKKNHPASSIIGDPSAGMQTRRKDKIDYLKMV 589

Query: 211 ADLCYISTVEPSTVD-SALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNVIGTKWVFK 270
           ADLCYIST+E STVD SAL+DEYWLNAMQEELLQFR+NNVW LV KP GVNVIGTKW+FK
Sbjct: 590 ADLCYISTIEHSTVDHSALKDEYWLNAMQEELLQFRRNNVWMLVLKPVGVNVIGTKWIFK 649

Query: 271 NKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQKFKLYQMD 330
           NKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQKFKLYQMD
Sbjct: 650 NKTDEIGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQKFKLYQMD 709

Query: 331 VKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQLTVYLRGKG 390
           VKS FL+GYLNEEVYVAQPKGFVD EHPKH+YKLNKALYGLKQA  AWYD+LTVYLRG+G
Sbjct: 710 VKSDFLNGYLNEEVYVAQPKGFVDFEHPKHVYKLNKALYGLKQAPGAWYDRLTVYLRGRG 769

Query: 391 YSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFIEFEMSMVGELSCFLGLQ 450
           YSRGEIDKTLFI  KSDQLLV QIYVDDIIF GFP  L                      
Sbjct: 770 YSRGEIDKTLFIDSKSDQLLVTQIYVDDIIFGGFPQGL---------------------- 829

Query: 451 IKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTESSEVDHKLYRSIVG 510
                                      ARNKRTP   HVKLTKDTE +EVDHKLYRSIVG
Sbjct: 830 ---------------------------ARNKRTPAMIHVKLTKDTEGAEVDHKLYRSIVG 848

Query: 511 SLLYITAS 518
           SLLY+TAS
Sbjct: 890 SLLYLTAS 848

BLAST of Cmc09g0249491 vs. ExPASy TrEMBL
Match: A0A5D3BPB3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001130 PE=4 SV=1)

HSP 1 Score: 698.0 bits (1800), Expect = 3.0e-197
Identity = 359/501 (71.66%), Postives = 390/501 (77.84%), Query Frame = 0

Query: 22  ESVNIACHIHNRVTIRSETTVTLYELWKDRKSNVKYFHVFGSTCYILADREYHKKWDAKS 81
           E+VN ACHIHNRV IR+ TT+TLYELWK+RK NVKYFHVFGSTCY+LADREYH+KWDA+S
Sbjct: 311 EAVNNACHIHNRVVIRTGTTITLYELWKERKPNVKYFHVFGSTCYVLADREYHQKWDARS 370

Query: 82  EQGIFLGYSQNSRAYRVFNNRSGCVMETINVVINDLEPAIKQINDEEDETSNMSEARTTS 141
           EQGIFLGYSQN+RAY+V+NN+SG VMETINVVINDL+  IKQ+NDEED+T NM E R   
Sbjct: 371 EQGIFLGYSQNNRAYKVYNNKSGSVMETINVVINDLDSNIKQMNDEEDKTLNMYEVR--- 430

Query: 142 SVEFPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIGDPSTGMQTRRK 201
                                                                       
Sbjct: 431 ------------------------------------------------------------ 490

Query: 202 EKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLVSKPEGVNV 261
                                T++SAL+DEYWLN MQEELLQFR+NNVWTL+SKPEGVNV
Sbjct: 491 ---------------------TMNSALKDEYWLNTMQEELLQFRRNNVWTLLSKPEGVNV 550

Query: 262 IGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRLLLGISCIQ 321
           IGTKW+FKNKTDE GCVTKNKA+LVAQGYTQVEG+DFDETFA VARLEAIRLLLGISCIQ
Sbjct: 551 IGTKWIFKNKTDETGCVTKNKARLVAQGYTQVEGVDFDETFAPVARLEAIRLLLGISCIQ 610

Query: 322 KFKLYQMDVKSAFLDGYLNEEVYVAQPKGFVDSEHPKHMYKLNKALYGLKQASRAWYDQL 381
           KFKLYQ+DVKS FL+GYLNEEVYVAQPKGFVDSEHPKH+YKLNKALYGLKQA RAWYD+L
Sbjct: 611 KFKLYQIDVKSTFLNGYLNEEVYVAQPKGFVDSEHPKHVYKLNKALYGLKQALRAWYDRL 670

Query: 382 TVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHDLVNNFI-----EFEM 441
           TVYLRG+GYSRGEIDK LFI RKSDQLLVAQIYVDDIIF GFP DL+NNFI     EFEM
Sbjct: 671 TVYLRGRGYSRGEIDKILFIHRKSDQLLVAQIYVDDIIFGGFPLDLINNFINIMQSEFEM 727

Query: 442 SMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKRTPVATHVKLTKDTES 501
           SMVGELSCFLGLQIKQKND IFISQEKYARNMVKKFGL+QARNKRTP ATHVKLTKDTE 
Sbjct: 731 SMVGELSCFLGLQIKQKNDGIFISQEKYARNMVKKFGLKQARNKRTPAATHVKLTKDTEG 727

Query: 502 SEVDHKLYRSIVGSLLYITAS 518
           +EVDHKLYRSIVGSLLY+TAS
Sbjct: 791 AEVDHKLYRSIVGSLLYLTAS 727

BLAST of Cmc09g0249491 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 193.7 bits (491), Expect = 3.6e-49
Identity = 131/393 (33.33%), Postives = 204/393 (51.91%), Query Frame = 0

Query: 132 SNMSEARTTSSVE-FPKAGKPSDDSRKSLEKSSKESITKKLELISSAHVKKNHPASSIIG 191
           S+   + ++SS++  P A   +D    S+  S +   T+K   +   +   +  AS  I 
Sbjct: 3   SDADASTSSSSIDIMPSANIQNDVPEPSVHTSHRR--TRKPAYLQDYYC--HSVASLTIH 62

Query: 192 DPSTGMQTRRKEKIDYMKMVADLCYISTVEPSTVDSALRDEYWLNAMQEELLQFRQNNVW 251
           D S   Q    EK+  +     +C     EPST + A     W  AM +E+      + W
Sbjct: 63  DIS---QFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTW 122

Query: 252 TLVSKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEA 311
            + + P     IG KWV+K K +  G + + KA+LVA+GYTQ EGIDF ETF+ V +L +
Sbjct: 123 EICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTS 182

Query: 312 IRLLLGISCIQKFKLYQMDVKSAFLDGYLNEEVYVAQPKGFV----DSEHPKHMYKLNKA 371
           ++L+L IS I  F L+Q+D+ +AFL+G L+EE+Y+  P G+     DS  P  +  L K+
Sbjct: 183 VKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKS 242

Query: 372 LYGLKQASRAWYDQLTVYLRGKGYSRGEIDKTLFIQRKSDQLLVAQIYVDDIIFRGFPHD 431
           +YGLKQASR W+ + +V L G G+ +   D T F++  +   L   +YVDDII       
Sbjct: 243 IYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDA 302

Query: 432 LVNNFIE-----FEMSMVGELSCFLGLQIKQKNDDIFISQEKYARNMVKKFGLEQARNKR 491
            V+         F++  +G L  FLGL+I +    I I Q KYA +++ + GL   +   
Sbjct: 303 AVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSS 362

Query: 492 TPVATHVKLTKDTESSEVDHKLYRSIVGSLLYI 515
            P+   V  +  +    VD K YR ++G L+Y+
Sbjct: 363 VPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYL 388

BLAST of Cmc09g0249491 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 94.4 bits (233), Expect = 2.9e-19
Identity = 52/125 (41.60%), Postives = 71/125 (56.80%), Query Frame = 0

Query: 196 MQTRRKEKIDYMKMVADLCYISTV--EPSTVDSALRDEYWLNAMQEELLQFRQNNVWTLV 255
           M TR K  I+ +     L   +T+  EP +V  AL+D  W  AMQEEL    +N  W LV
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 256 SKPEGVNVIGTKWVFKNKTDEAGCVTKNKAKLVAQGYTQVEGIDFDETFASVARLEAIRL 315
             P   N++G KWVFK K    G + + KA+LVA+G+ Q EGI F ET++ V R   IR 
Sbjct: 61  PPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRT 120

Query: 316 LLGIS 319
           +L ++
Sbjct: 121 ILNVA 125

BLAST of Cmc09g0249491 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 59.7 bits (143), Expect = 8.0e-09
Identity = 38/109 (34.86%), Postives = 59/109 (54.13%), Query Frame = 0

Query: 413 IYVDDIIFRGFPHDLVNNFI-----EFEMSMVGELSCFLGLQIKQKNDDIFISQEKYARN 472
           +YVDDI+  G  + L+N  I      F M  +G +  FLG+QIK     +F+SQ KYA  
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 473 MVKKFGLEQARNKRTPVATHVKLTKDTESSEV-DHKLYRSIVGSLLYIT 516
           ++   G+   +   TP+   +KL     +++  D   +RSIVG+L Y+T
Sbjct: 65  ILNNAGMLDCKPMSTPLP--LKLNSSVSTAKYPDPSDFRSIVGALQYLT 111

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0066164.12.5e-24699.77gag-pol polyprotein [Cucumis melo var. makuwa] >TYK15206.1 gag-pol polyprotein [... [more]
TYJ98791.13.8e-21887.95gag-pol polyprotein [Cucumis melo var. makuwa][more]
TYK29237.15.1e-19979.05gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0035157.17.4e-19875.20gag-pol polyprotein [Cucumis melo var. makuwa][more]
KAA0053137.16.3e-19771.66gag-pol polyprotein [Cucumis melo var. makuwa] >TYK01543.1 gag-pol polyprotein [... [more]
Match NameE-valueIdentityDescription
P041463.8e-5628.43Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109782.1e-5428.36Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
Q94HW29.8e-5233.08Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT942.4e-5032.16Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P256003.8e-1931.09Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT... [more]
Match NameE-valueIdentityDescription
A0A5D3CXU01.2e-24699.77Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G... [more]
A0A5D3BJA91.8e-21887.95Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G... [more]
A0A5D3DZD22.5e-19979.05Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1228... [more]
A0A5A7T0Q03.6e-19875.20Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G0... [more]
A0A5D3BPB33.0e-19771.66Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G... [more]
Match NameE-valueIdentityDescription
AT4G23160.13.6e-4933.33cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00820.12.9e-1941.60Reverse transcriptase (RNA-dependent DNA polymerase) [more]
ATMG00810.18.0e-0934.86DNA/RNA polymerases superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 247..484
e-value: 2.3E-67
score: 227.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 126..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..164
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 4..505
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 247..474

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0249491.1Cmc09g0249491.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding