Cmc09g0249401 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0249401
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr09: 15248884 .. 15250104 (+)
RNA-Seq Expression	Cmc09g0249401
Synteny	Cmc09g0249401

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCATTCGGTTTAACGAATGCACCAACGGTCTTCATGGATCTCATGAACAGGATCTTCCATCAGTATTTAGATTAGTTTGTGATCGTGTTCATCGATGATATATTAGTTTACTCGGTTGACAGAGAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGATAAACAGTTGTATGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGACATGTAGTTTCAGGAAAAGGAGTTAGTGTTGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCACGATTGGCATTGCCTTTGACTGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTCTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAATGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCATTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGTCATATTTTCACATATCATAAAAGTCTGAATTATATTTTTGATCAGAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTGCTATAGAGTATCATCCAGGTAAGGCTAACGTAGTAGCGGATGCATTAAGTAGGAAGTCAAGACTTTCGAAGAGTGTCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAAGATCCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTAAAATTGTAAGAAGACTGTCAGAGGACAGTAATTTACAGAAGAAGCTTGAGAAATCCAAGAAAAGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAGGGAAGATTATGTGTTCTGAATATCAGTGAGCTTAAGAATGCTATTCTAGACCATGCAGAACTTCTGTTTGCTGGAATGAAGTGGGAGAGCGAAAGTTAG

mRNA sequence

ATGCCATTCGGTTTAACGAATGCACCAACGGTCTTCATGGATCTCATGAACAGGATCTTCCATCAAGAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGATAAACAGTTGTATGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGACATGTAGTTTCAGGAAAAGGAGTTAGTGTTGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCACGATTGGCATTGCCTTTGACTGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTCTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAATGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCATTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGTCATATTTTCACATATCATAAAAGTCTGAATTATATTTTTGATCAGAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTGCTATAGAGTATCATCCAGGTAAGGCTAACGTAGTAGCGGATGCATTAAGTAGGAAGTCAAGACTTTCGAAGAGTGTCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAAGATCCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTAAAATTGTAAGAAGACTGTCAGAGGACAGTAATTTACAGAAGAAGCTTGAGAAATCCAAGAAAAGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAGGGAAGATTATGTGTTCTGAATATCAGTGAGCTTAAGAATGCTATTCTAGACCATGCAGAACTTCTGTTTGCTGGAATGAAGTGGGAGAGCGAAAGTTAG

Coding sequence (CDS)

ATGCCATTCGGTTTAACGAATGCACCAACGGTCTTCATGGATCTCATGAACAGGATCTTCCATCAAGAAGCCCATGAGGAACATCTGAGGATTGTTCTACAGACTCTACGTGATAAACAGTTGTATGCTAAGTTCAGCAAATGTGAGTTCTGGTTGGAACAAGTAGTATTTTTGGGACATGTAGTTTCAGGAAAAGGAGTTAGTGTTGATCCACAAAAAGTAGAAGCGGTTGTCAATTGGGAAAGACCAACTAGTGCGACAGAAGTACGTAGTTTCCTGGGTTTGGCAGGATACTATAGGCGTTTTATTGAGGATTTCTCACGATTGGCATTGCCTTTGACTGCTTTGACAAGGAAGAATGCTAAGTTTGAGTGGTCAGATAAATGCGAGCAAAGTTTTCAGGAATTGAAGAAAAGACTAGTCACAGCACCTATTCTGGCACTTCCTGTAACAGGGAAGGACTATGTGATTTATTGTGATGCTTCAAGGCTAGGATTAGGTTGTGTGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGCAGTTGAATGAGCATGAGTGTAATTACCCTACCCATGATCTTGAGCTAGCAGCAGTTGTTTTAGCATTAAAAATCTGGAGACACTATTTGTTCGGGGAAAAGTGTCATATTTTCACATATCATAAAAGTCTGAATTATATTTTTGATCAGAAAGAGCTAAATCTGAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTGCTATAGAGTATCATCCAGGTAAGGCTAACGTAGTAGCGGATGCATTAAGTAGGAAGTCAAGACTTTCGAAGAGTGTCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGAGGTTCCAAGGCAGTAGTAACTACAGAAGATCCAGGAAGTCTCTTAGCTCAATTTCAGGTTCGGTCTTCTCTAGTAACTAAAATTGTAAGAAGACTGTCAGAGGACAGTAATTTACAGAAGAAGCTTGAGAAATCCAAGAAAAGCTTAGAGGTGGAGTTTGAGCTGAGAACAGATGGAGCCATTGTTAAACAGGGAAGATTATGTGTTCTGAATATCAGTGAGCTTAAGAATGCTATTCTAGACCATGCAGAACTTCTGTTTGCTGGAATGAAGTGGGAGAGCGAAAGTTAG

Protein sequence

MPFGLTNAPTVFMDLMNRIFHQEAHEEHLRIVLQTLRDKQLYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIFTYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCGIRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLEVEFELRTDGAIVKQGRLCVLNISELKNAILDHAELLFAGMKWESES

Homology

[Close]

BLAST of Cmc09g0249401 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 691.4 bits (1783), Expect = 4.4e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
           MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 333 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 392

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 393 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 452

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 453 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 512

Query: 181 ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
           ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 513 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 572

Query: 241 TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
           T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 573 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 632

Query: 301 IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
           IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 633 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 692

Query: 361 VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
           VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 693 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 725

[Close]

BLAST of Cmc09g0249401 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 691.4 bits (1783), Expect = 4.4e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
           MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 440 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 499

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 500 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 559

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 560 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 619

Query: 181 ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
           ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 620 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 679

Query: 241 TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
           T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 680 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 739

Query: 301 IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
           IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 740 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 799

Query: 361 VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
           VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 800 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 832

[Close]

BLAST of Cmc09g0249401 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 691.4 bits (1783), Expect = 4.4e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1    MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
            MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 779  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 838

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 839  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 898

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 899  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 958

Query: 181  ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
            ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 959  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 1018

Query: 241  TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
            T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 1019 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1078

Query: 301  IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
            IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 1079 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 1138

Query: 361  VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
            VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 1139 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 1171

[Close]

BLAST of Cmc09g0249401 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 691.4 bits (1783), Expect = 4.4e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1    MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
            MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 779  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 838

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 839  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 898

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 899  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 958

Query: 181  ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
            ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 959  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 1018

Query: 241  TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
            T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 1019 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1078

Query: 301  IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
            IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 1079 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 1138

Query: 361  VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
            VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 1139 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 1171

[Close]

BLAST of Cmc09g0249401 vs. NCBI nr
Match: KAA0062270.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 691.4 bits (1783), Expect = 4.4e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1    MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
            MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 677  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 736

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 737  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 796

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 797  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 856

Query: 181  ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
            ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 857  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 916

Query: 241  TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
            T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 917  TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 976

Query: 301  IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
            IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 977  IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 1036

Query: 361  VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
            VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 1037 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 1069

[Close]

BLAST of Cmc09g0249401 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 2.3e-53
Identity = 111/290 (38.28%), Postives = 166/290 (57.24%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFHQ--------------------EAHEEHLRIVLQTLRDKQ 60
           MPFGL NAP  F   MN I                       + H + L +V + L    
Sbjct: 334 MPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKAN 393

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           L  +  KCEF  ++  FLGHV++  G+  +P+K+EA+  +  PT   E+++FLGL GYYR
Sbjct: 394 LKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYR 453

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSD-KCEQSFQELKKRLVTAPILALPVTGKDYVIYC 180
           +FI +F+ +A P+T   +KN K + ++ + + +F++LK  +   PIL +P   K + +  
Sbjct: 454 KFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTT 513

Query: 181 DASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHI 240
           DAS + LG VL QDG+ ++Y SR LNEHE NY T + EL A+V A K +RHYL G    I
Sbjct: 514 DASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEI 573

Query: 241 FTYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSR 270
            + H+ L++++  K+ N +  RW   + ++D  I+Y  GK N VADALSR
Sbjct: 574 SSDHQPLSWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc09g0249401 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.3e-52
Identity = 113/291 (38.83%), Postives = 165/291 (56.70%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFHQ--------------------EAHEEHLRIVLQTLRDKQ 60
           MPFGL NAP  F   MN I                         H   +++V   L D  
Sbjct: 333 MPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVFTKLADAN 392

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           L  +  KCEF  ++  FLGH+V+  G+  +P KV+A+V++  PT   E+R+FLGL GYYR
Sbjct: 393 LKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYR 452

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCE--QSFQELKKRLVTAPILALPVTGKDYVIY 180
           +FI +++ +A P+T+  +K  K + + K E  ++F++LK  ++  PIL LP   K +V+ 
Sbjct: 453 KFIPNYADIAKPMTSCLKKRTKID-TQKLEYIEAFEKLKALIIRDPILQLPDFEKKFVLT 512

Query: 181 CDASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCH 240
            DAS L LG VL Q+G+ I++ SR LN+HE NY   + EL A+V A K +RHYL G +  
Sbjct: 513 TDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYLLGRQFL 572

Query: 241 IFTYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSR 270
           I + H+ L ++ + KE   +  RW   + +Y   I+Y  GK N VADALSR
Sbjct: 573 IASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc09g0249401 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.9e-48
Identity = 113/305 (37.05%), Postives = 164/305 (53.77%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFHQ--------------------EAHEEHLRIVLQTLRDKQ 60
           +PFGL NAP +F  +++ I  +                    + H ++LR+VL +L    
Sbjct: 250 LPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKAN 309

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           L     K  F   QV FLG++V+  G+  DP+KV A+     PTS  E++ FLG+  YYR
Sbjct: 310 LQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYR 369

Query: 121 RFIEDFSRLALPLTALTR---KNAKFEWSDKCE--------QSFQELKKRLVTAPILALP 180
           +FI+D++++A PLT LTR    N K   S K          QSF +LK  L ++ ILA P
Sbjct: 370 KFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFP 429

Query: 181 VTGKDYVIYCDASRLGLGCVLMQD----GNVIAYASRQLNEHECNYPTHDLELAAVVLAL 240
              K + +  DAS   +G VL QD       IAY SR LN+ E NY T + E+ A++ +L
Sbjct: 430 CFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSL 489

Query: 241 KIWRHYLFGE-KCHIFTYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVA 270
              R YL+G     ++T H+ L +    +  N + +RW   I++Y+C + Y PGK+NVVA
Sbjct: 490 DNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVA 549

[Close]

BLAST of Cmc09g0249401 vs. ExPASy Swiss-Prot
Match: P10401 (Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-41
Identity = 102/304 (33.55%), Postives = 157/304 (51.64%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFHQEA--------------------HEEHLRIVLQTLRDKQ 60
           +PFGL NA ++F   ++ +  ++                     H  H+  VL+ L D  
Sbjct: 309 LPFGLRNASSIFQRALDDVLREQIGKICYVYVDDVIIFSENESDHVRHIDTVLKCLIDAN 368

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           +     K  F+ E V +LG +VS  G   DP+KV+A+  +  P    +VRSFLGLA YYR
Sbjct: 369 MRVSQEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYR 428

Query: 121 RFIEDFSRLALPLTALTR-----------KNAKFEWSDKCEQSFQELKKRLVTAP-ILAL 180
            FI+DF+ +A P+T + +           K    E+++    +FQ L+  L +   IL  
Sbjct: 429 VFIKDFAAIARPITDILKGENGSVSKHMSKKIPVEFNETQRNAFQRLRNILASEDVILKY 488

Query: 181 PVTGKDYVIYCDASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIW 240
           P   K + +  DAS  G+G VL Q+G  I   SR L + E NY T++ EL A+V AL   
Sbjct: 489 PDFKKPFDLTTDASASGIGAVLSQEGRPITMISRTLKQPEQNYATNERELLAIVWALGKL 548

Query: 241 RHYLFGEK-CHIFTYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADAL 272
           +++L+G +  +IFT H+ L +    +  N + +RW   I  ++  + Y PGK N VADAL
Sbjct: 549 QNFLYGSREINIFTDHQPLTFAVADRNTNAKIKRWKSYIDQHNAKVFYKPGKENFVADAL 608

[Close]

BLAST of Cmc09g0249401 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 2.2e-40
Identity = 117/403 (29.03%), Postives = 191/403 (47.39%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFH-------------------QEAHE-EHLRIVLQTLRDKQ 60
           +PFGL  AP  F  +M   F                     E H  ++L  V    R+  
Sbjct: 442 LPFGLKIAPNSFQRMMTIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTEVFGKCREYN 501

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           L     KC F++ +V FLGH  + KG+  D +K + + N+  P  A   R F+    YYR
Sbjct: 502 LKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYR 561

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
           RFI++F+  +  +T L +KN  FEW+D+C+++F  LK +L+   +L  P   K++ I  D
Sbjct: 562 RFIKNFADYSRHITRLCKKNVPFEWTDECQKAFIHLKSQLINPTLLQYPDFSKEFCITTD 621

Query: 181 ASRLGLGCVLMQDGN----VIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEK 240
           AS+   G VL Q+ N     +AYASR   + E N  T + ELAA+  A+  +R Y++G+ 
Sbjct: 622 ASKQACGAVLTQNHNGHQLPVAYASRAFTKGESNKSTTEQELAAIHWAIIHFRPYIYGKH 681

Query: 241 CHIFTYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKS 300
             + T H+ L Y+F     + +  R    +++Y+  +EY  GK N VADALSR       
Sbjct: 682 FTVKTDHRPLTYLFSMVNPSSKLTRIRLELEEYNFTVEYLKGKDNHVADALSR------- 741

Query: 301 VLCGIRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSK 360
               I +  L ++ G+   VTT       +        + K  + ++ + N+ + +   +
Sbjct: 742 ----ITIKELKDITGNILKVTTRFQSRQKSCAGKEQLDLQKQTKEIASEPNVYEVITNDE 801

Query: 361 KSLEVEFELRTDGAIVKQGRLCV--LNISEL-KNAILDHAELL 377
               V  +L     + K G+  +   ++ +L  N ILD  + L
Sbjct: 802 VRKVVTLQLNDSICLFKHGKKIIARYDVGDLYTNGILDLDQFL 833

[Close]

BLAST of Cmc09g0249401 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.1e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1    MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
            MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 741  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 800

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 801  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 860

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 861  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 920

Query: 181  ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
            ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 921  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 980

Query: 241  TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
            T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 981  TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1040

Query: 301  IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
            IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 1041 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 1100

Query: 361  VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
            VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 1101 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 1133

[Close]

BLAST of Cmc09g0249401 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.1e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1    MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
            MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 779  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 838

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 839  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 898

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 899  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 958

Query: 181  ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
            ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 959  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 1018

Query: 241  TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
            T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 1019 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1078

Query: 301  IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
            IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 1079 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 1138

Query: 361  VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
            VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 1139 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 1171

[Close]

BLAST of Cmc09g0249401 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.1e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1    MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
            MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 779  MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 838

Query: 61   LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
            LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 839  LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 898

Query: 121  RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
            RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 899  RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 958

Query: 181  ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
            ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 959  ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 1018

Query: 241  TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
            T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 1019 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 1078

Query: 301  IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
            IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 1079 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 1138

Query: 361  VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
            VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 1139 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 1171

[Close]

BLAST of Cmc09g0249401 vs. ExPASy TrEMBL
Match: A0A5A7UUL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00090 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.1e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
           MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 411 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 470

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 471 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 530

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 531 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 590

Query: 181 ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
           ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 591 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 650

Query: 241 TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
           T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 651 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 710

Query: 301 IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
           IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 711 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 770

Query: 361 VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
           VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 771 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 803

[Close]

BLAST of Cmc09g0249401 vs. ExPASy TrEMBL
Match: A0A5A7T3K4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00170 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.1e-195
Identity = 352/393 (89.57%), Postives = 357/393 (90.84%), Query Frame = 0


Query: 1   MPFGLTNAPTVFMDLMNRIFH--------------------QEAHEEHLRIVLQTLRDKQ 60
           MPFGLTNAP VFMDLMNRIFH                    +E+HEEHLRIVLQTLR+KQ
Sbjct: 380 MPFGLTNAPAVFMDLMNRIFHRYLDQFVIVFIDDILVYSVDRESHEEHLRIVLQTLREKQ 439

Query: 61  LYAKFSKCEFWLEQVVFLGHVVSGKGVSVDPQKVEAVVNWERPTSATEVRSFLGLAGYYR 120
           LYAKFSKCEFWLEQVVFLGHVVS KGVSVDPQKVEAVVNWERP SATEVRSFLGLAGYYR
Sbjct: 440 LYAKFSKCEFWLEQVVFLGHVVSAKGVSVDPQKVEAVVNWERPISATEVRSFLGLAGYYR 499

Query: 121 RFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 180
           RFIEDFSRLALPLTALTRKN KFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD
Sbjct: 500 RFIEDFSRLALPLTALTRKNVKFEWSDKCEQSFQELKKRLVTAPILALPVTGKDYVIYCD 559

Query: 181 ASRLGLGCVLMQDGNVIAYASRQLNEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 240
           ASRLGLGCVLMQDGNVIAYASRQL EHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF
Sbjct: 560 ASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGEKCHIF 619

Query: 241 TYHKSLNYIFDQKELNLRQRRWLELIKDYDCAIEYHPGKANVVADALSRKSRLSKSVLCG 300
           T HKSL YIFDQKELNLRQRRWLELIKDYDC IEYHPGKANVVADALSRKSRL KS LCG
Sbjct: 620 TDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPKSALCG 679

Query: 301 IRVALLNELRGSKAVVTTEDPGSLLAQFQVRSSLVTKIVRRLSEDSNLQKKLEKSKKSLE 360
           IRVALLNELRGSKAVVTTED GSLLAQFQVRSSLVT+IVRR SEDSNLQKK EKSKK LE
Sbjct: 680 IRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKSKKGLE 739

Query: 361 VEFELRTDGAIVKQGRLCVLNISELKNAILDHA 374
           VEFELRTDGAIVKQGRLCV NISELKNAIL+ A
Sbjct: 740 VEFELRTDGAIVKQGRLCVPNISELKNAILEEA 772

[Close]

BLAST of Cmc09g0249401 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 122.9 bits (307), Expect = 5.8e-28
Identity = 57/124 (45.97%), Postives = 82/124 (66.13%), Query Frame = 0


Query: 28  HLRIVLQTLRDKQLYAKFSKCEFWLEQVVFLG--HVVSGKGVSVDPQKVEAVVNWERPTS 87
           HL +VLQ     Q YA   KC F   Q+ +LG  H++SG+GVS DP K+EA+V W  P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 88  ATEVRSFLGLAGYYRRFIEDFSRLALPLTALTRKNAKFEWSDKCEQSFQELKKRLVTAPI 147
            TE+R FLGL GYYRRF++++ ++  PLT L +KN+  +W++    +F+ LK  + T P+
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 148 LALP 150
           LALP
Sbjct: 123 LALP 125

The following BLAST results are available for this feature:

BLAST of Cmc09g0249401 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050493.1	4.4e-195	89.57	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050527.1	4.4e-195	89.57	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0066849.1	4.4e-195	89.57	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	4.4e-195	89.57	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]
KAA0062270.1	4.4e-195	89.57	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc09g0249401 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	2.3e-53	38.28	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	3.3e-52	38.83	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	2.9e-48	37.05	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
P10401	1.5e-41	33.55	Retrovirus-related Pol polyprotein from transposon gypsy OS=Drosophila melanogas...	[more]
P10394	2.2e-40	29.03	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaste...	[more]

BLAST of Cmc09g0249401 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	2.1e-195	89.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	2.1e-195	89.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	2.1e-195	89.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UUL6	2.1e-195	89.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7T3K4	2.1e-195	89.57	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold51...	[more]

BLAST of Cmc09g0249401 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	5.8e-28	45.97	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 72..153 e-value: 1.5E-32 score: 113.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 1..69 e-value: 5.8E-14 score: 54.5
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 125..219 e-value: 5.4E-31 score: 106.6
None	No IPR available	GENE3D	3.10.20.370		coord: 154..220 e-value: 6.9E-7 score: 31.2
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 62..295
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 62..295
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 156..270 e-value: 1.56504E-55 score: 176.529
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..255

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0249401.1	Cmc09g0249401.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding