Cmc09g0248841 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0248841
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Lipoyl synthase, chloroplastic
Location	CMiso1.1chr09: 14422112 .. 14422891 (+)
RNA-Seq Expression	Cmc09g0248841
Synteny	Cmc09g0248841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTCTTCTACTTGTTTTATTAATGGGTATAACTAATTTTTGATACTATTGAATTTTTCTTTTTGTATTGTCTTTTAGTGTGGATTACATCGTCTTAACAACTGTAGACCGTGATGATATTCCTAATGGAGGAAGTGGGCATTTTGCTCAAACAGTTAAAGCAATGAAGGTTGCATAGATTTTTCTACAATAATTTTTGTCTCTTTATTGATAAACTGAATTGTTGAAGGTTTCTTGGAAAAGTTACTAGAAGTCTGATTAGTCTTAGTGAATTTATTACGTAGGAACTTAAGCTTGGGACAATTTATTACGTAGGAACTTAAGCTCGGGATAATGGTTGAATGCTTAACTTTTGATTTCCGAGGTGACTTAAAGGTTGTGGAGACTCTTGTTCACTCAGGGTTAGATGTATTTGCTCACAATATTGAGACTGTGAAATGGCTTCAAAGAATTGTTAAAGATCCTCGAGCTGGGTAAGTTGTGTTACCAATTAACTTTGTTTCAATTCTGTCTCTAGACTTGAGTGTGTATTTGAGTTCTAAATCCATAAAATGTCTTTTAATGACATATCAAGTGATAGTTCGGAGTGCAGTGAAGAGCATCATGCCACAGGACATCAAGGGATGGTTATCTTAGGACTTGATAGTTTGGCATAGAAATTATTTGTAGTAACTTGCTTCCATTGATTTGTGTAAGTTATAAAAGTTTATAATGGTAATGTTTCTGCATTGTTCTTTTAATAACTGTGTTGAAAAATACAGGCTGTTACATTGGTAG

mRNA sequence

ATGTTCTCTTCTACTTGTTTTATTAATGGTGTGGATTACATCGTCTTAACAACTGTAGACCGTGATGATATTCCTAATGGAGGAAGTGGGCATTTTGCTCAAACAGAACTTAAGCTCGGGATAATGGTTGAATGCTTAACTTTTGATTTCCGAGGTGACTTAAAGGTTGTGGAGACTCTTGTTCACTCAGGGTTAGATGTATTTGCTCACAATATTGAGACTGTGAAATGGCTTCAAAGAATTGTTAAAGATCCTCGAGCTGGGCTGTTACATTGGTAG

Coding sequence (CDS)

ATGTTCTCTTCTACTTGTTTTATTAATGGTGTGGATTACATCGTCTTAACAACTGTAGACCGTGATGATATTCCTAATGGAGGAAGTGGGCATTTTGCTCAAACAGAACTTAAGCTCGGGATAATGGTTGAATGCTTAACTTTTGATTTCCGAGGTGACTTAAAGGTTGTGGAGACTCTTGTTCACTCAGGGTTAGATGTATTTGCTCACAATATTGAGACTGTGAAATGGCTTCAAAGAATTGTTAAAGATCCTCGAGCTGGGCTGTTACATTGGTAG

Protein sequence

MFSSTCFINGVDYIVLTTVDRDDIPNGGSGHFAQTELKLGIMVECLTFDFRGDLKVVETLVHSGLDVFAHNIETVKWLQRIVKDPRAGLLHW

Homology

[Close]

BLAST of Cmc09g0248841 vs. NCBI nr
Match: XP_008445908.1 (PREDICTED: lipoyl synthase, chloroplastic [Cucumis melo] >KAA0034092.1 lipoyl synthase [Cucumis melo var. makuwa] >TYK15826.1 lipoyl synthase [Cucumis melo var. makuwa])

HSP 1 Score: 142.1 bits (357), Expect = 2.4e-30
Identity = 71/84 (84.52%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 195 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 254

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHNIETVK LQRIV+DPRAG
Sbjct: 255 LDVFAHNIETVKRLQRIVRDPRAG 278

[Close]

BLAST of Cmc09g0248841 vs. NCBI nr
Match: XP_038893417.1 (lipoyl synthase, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 142.1 bits (357), Expect = 2.4e-30
Identity = 71/84 (84.52%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 203 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 262

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHNIETVK LQRIV+DPRAG
Sbjct: 263 LDVFAHNIETVKRLQRIVRDPRAG 286

[Close]

BLAST of Cmc09g0248841 vs. NCBI nr
Match: XP_022945153.1 (lipoyl synthase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 141.7 bits (356), Expect = 3.1e-30
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 200 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 259

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQRIV+DPRAG
Sbjct: 260 LDVFAHNVETVKRLQRIVRDPRAG 283

[Close]

BLAST of Cmc09g0248841 vs. NCBI nr
Match: XP_023541459.1 (lipoyl synthase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 141.7 bits (356), Expect = 3.1e-30
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 197 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 256

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQRIV+DPRAG
Sbjct: 257 LDVFAHNVETVKRLQRIVRDPRAG 280

[Close]

BLAST of Cmc09g0248841 vs. NCBI nr
Match: KAG6573763.1 (Lipoyl synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 141.7 bits (356), Expect = 3.1e-30
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 195 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 254

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQRIV+DPRAG
Sbjct: 255 LDVFAHNVETVKRLQRIVRDPRAG 278

[Close]

BLAST of Cmc09g0248841 vs. ExPASy Swiss-Prot
Match: B9I666 (Lipoyl synthase 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-1 PE=3 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-32
Identity = 67/84 (79.76%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIV+T+VDRDD+P+GGSGHFAQT     ELK  IMVECLT DFRGDLK V+TLVHSG
Sbjct: 172 GVDYIVITSVDRDDLPDGGSGHFAQTVRAMKELKPEIMVECLTSDFRGDLKAVDTLVHSG 231

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQRIV+DPRAG
Sbjct: 232 LDVFAHNVETVKRLQRIVRDPRAG 255

[Close]

BLAST of Cmc09g0248841 vs. ExPASy Swiss-Prot
Match: B9N2B0 (Lipoyl synthase 2, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-2 PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-31
Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIV+T+VDRDD+ +GGSGHFAQT     ELK  IMVECLT DFRGDLK V+TLVHSG
Sbjct: 193 GVDYIVITSVDRDDLSDGGSGHFAQTVRAMKELKPEIMVECLTSDFRGDLKAVDTLVHSG 252

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQRIV+DPRAG
Sbjct: 253 LDVFAHNVETVKRLQRIVRDPRAG 276

[Close]

BLAST of Cmc09g0248841 vs. ExPASy Swiss-Prot
Match: B9RX57 (Lipoyl synthase, chloroplastic OS=Ricinus communis OX=3988 GN=LIP1P PE=3 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.2e-31
Identity = 66/84 (78.57%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDD+P+GGSGHF++T     +LK  IMVECLT DFRGDL+ VETLVHSG
Sbjct: 160 GVDYIVLTSVDRDDLPDGGSGHFSETVQAMKKLKPEIMVECLTSDFRGDLEAVETLVHSG 219

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHNIETVK LQRIV+DPRAG
Sbjct: 220 LDVFAHNIETVKRLQRIVRDPRAG 243

[Close]

BLAST of Cmc09g0248841 vs. ExPASy Swiss-Prot
Match: Q8LEE8 (Lipoyl synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP1P PE=1 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-30
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIV+T+VDRDDIP+GGSGHFAQT       K  IM+ECLT DFRGDL+ V+TLVHSG
Sbjct: 192 GVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSG 251

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQR+V+DPRAG
Sbjct: 252 LDVFAHNVETVKRLQRLVRDPRAG 275

[Close]

BLAST of Cmc09g0248841 vs. ExPASy Swiss-Prot
Match: B8AA76 (Lipoyl synthase 1, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=LIP1P-1 PE=3 SV=2)

HSP 1 Score: 129.8 bits (325), Expect = 1.6e-29
Identity = 62/84 (73.81%), Postives = 71/84 (84.52%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDY+VLT+VDRDD+P+GGS HFAQT     ELK GI+VECLT DFRGDL+ V  L +SG
Sbjct: 166 GVDYVVLTSVDRDDLPDGGSSHFAQTVRALKELKPGILVECLTSDFRGDLEAVSALANSG 225

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHNIETV+ LQRIV+DPRAG
Sbjct: 226 LDVFAHNIETVRSLQRIVRDPRAG 249

[Close]

BLAST of Cmc09g0248841 vs. ExPASy TrEMBL
Match: A0A5D3CZE8 (Lipoyl synthase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=LIP1P PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 71/84 (84.52%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 195 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 254

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHNIETVK LQRIV+DPRAG
Sbjct: 255 LDVFAHNIETVKRLQRIVRDPRAG 278

[Close]

BLAST of Cmc09g0248841 vs. ExPASy TrEMBL
Match: A0A1S3BDA7 (Lipoyl synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488790 PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 1.1e-30
Identity = 71/84 (84.52%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 195 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 254

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHNIETVK LQRIV+DPRAG
Sbjct: 255 LDVFAHNIETVKRLQRIVRDPRAG 278

[Close]

BLAST of Cmc09g0248841 vs. ExPASy TrEMBL
Match: A0A6J1HVC4 (Lipoyl synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466525 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 197 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 256

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQRIV+DPRAG
Sbjct: 257 LDVFAHNVETVKRLQRIVRDPRAG 280

[Close]

BLAST of Cmc09g0248841 vs. ExPASy TrEMBL
Match: A0A0A0KPN0 (Lipoyl synthase, chloroplastic OS=Cucumis sativus OX=3659 GN=LIP1P PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 195 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 254

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQRIV+DPRAG
Sbjct: 255 LDVFAHNVETVKRLQRIVRDPRAG 278

[Close]

BLAST of Cmc09g0248841 vs. ExPASy TrEMBL
Match: A0A6J1G009 (Lipoyl synthase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449476 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-30
Identity = 70/84 (83.33%), Postives = 74/84 (88.10%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIVLT+VDRDDIP+GGSGHFAQT     ELK  IMVECLT DFRGDLK VETLVHSG
Sbjct: 200 GVDYIVLTSVDRDDIPDGGSGHFAQTVKAMKELKPEIMVECLTSDFRGDLKAVETLVHSG 259

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQRIV+DPRAG
Sbjct: 260 LDVFAHNVETVKRLQRIVRDPRAG 283

[Close]

BLAST of Cmc09g0248841 vs. TAIR 10
Match: AT5G08415.1 (Radical SAM superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 1.3e-31
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQT-----ELKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDYIV+T+VDRDDIP+GGSGHFAQT       K  IM+ECLT DFRGDL+ V+TLVHSG
Sbjct: 192 GVDYIVITSVDRDDIPDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSG 251

Query: 70  LDVFAHNIETVKWLQRIVKDPRAG 89
           LDVFAHN+ETVK LQR+V+DPRAG
Sbjct: 252 LDVFAHNVETVKRLQRLVRDPRAG 275

[Close]

BLAST of Cmc09g0248841 vs. TAIR 10
Match: AT2G20860.1 (lipoic acid synthase 1 )

HSP 1 Score: 95.1 bits (235), Expect = 3.1e-20
Identity = 48/83 (57.83%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 10  GVDYIVLTTVDRDDIPNGGSGHFAQTE-----LKLGIMVECLTFDFRGDLKVVETLVHSG 69
           GVDY+V+T+VDRDD+P+ GSGHFA+T      LK  +++E L  DFRGD   VE +  SG
Sbjct: 168 GVDYVVITSVDRDDLPDQGSGHFAETVQRLKFLKPEMLIEALVPDFRGDGGCVEKVSKSG 227

Query: 70  LDVFAHNIETVKWLQRIVKDPRA 88
           LDV AHNIETV+ LQ  V+D RA
Sbjct: 228 LDVLAHNIETVEELQSFVRDHRA 250

The following BLAST results are available for this feature:

BLAST of Cmc09g0248841 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445908.1	2.4e-30	84.52	PREDICTED: lipoyl synthase, chloroplastic [Cucumis melo] >KAA0034092.1 lipoyl sy...	[more]
XP_038893417.1	2.4e-30	84.52	lipoyl synthase, chloroplastic-like [Benincasa hispida]	[more]
XP_022945153.1	3.1e-30	83.33	lipoyl synthase, chloroplastic [Cucurbita moschata]	[more]
XP_023541459.1	3.1e-30	83.33	lipoyl synthase, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
KAG6573763.1	3.1e-30	83.33	Lipoyl synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Cmc09g0248841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9I666	2.6e-32	79.76	Lipoyl synthase 1, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-1 PE=3 ...	[more]
B9N2B0	2.2e-31	78.57	Lipoyl synthase 2, chloroplastic OS=Populus trichocarpa OX=3694 GN=LIP1P-2 PE=3 ...	[more]
B9RX57	2.2e-31	78.57	Lipoyl synthase, chloroplastic OS=Ricinus communis OX=3988 GN=LIP1P PE=3 SV=1	[more]
Q8LEE8	1.9e-30	75.00	Lipoyl synthase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LIP1P PE=1 SV=...	[more]
B8AA76	1.6e-29	73.81	Lipoyl synthase 1, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=LIP1P...	[more]

BLAST of Cmc09g0248841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CZE8	1.1e-30	84.52	Lipoyl synthase, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=LIP1P P...	[more]
A0A1S3BDA7	1.1e-30	84.52	Lipoyl synthase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488790 PE=3 SV=1	[more]
A0A6J1HVC4	1.5e-30	83.33	Lipoyl synthase, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466525 PE=3 ...	[more]
A0A0A0KPN0	1.5e-30	83.33	Lipoyl synthase, chloroplastic OS=Cucumis sativus OX=3659 GN=LIP1P PE=3 SV=1	[more]
A0A6J1G009	1.5e-30	83.33	Lipoyl synthase, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111449476 PE=...	[more]

BLAST of Cmc09g0248841 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08415.1	1.3e-31	75.00	Radical SAM superfamily protein	[more]
AT2G20860.1	3.1e-20	57.83	lipoic acid synthase 1	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003698	Lipoyl synthase	PANTHER	PTHR10949	LIPOYL SYNTHASE	coord: 10..88
None	No IPR available	PANTHER	PTHR10949:SF32	LIPOYL SYNTHASE, CHLOROPLASTIC	coord: 10..88
None	No IPR available	SUPERFAMILY	102114	Radical SAM enzymes	coord: 9..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0248841.1	Cmc09g0248841.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009107	lipoate biosynthetic process
biological_process	GO:0009249	protein lipoylation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016992	lipoate synthase activity
molecular_function	GO:0046872	metal ion binding