Cmc09g0248381 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0248381
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag/pol protein
Location	CMiso1.1chr09: 13845742 .. 13848152 (-)
RNA-Seq Expression	Cmc09g0248381
Synteny	Cmc09g0248381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATTGGATCAGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAGAAGATGATTCATTACCTCCATGTGAATCTTGTCTTGAAGGAAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTCTGTGGTCCGATAAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTGTAGGTATGGTTATTTATACTTAATGGAGCATAAGTTTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATTTGATCGAGGTAGAGAGTACATGGATTTGAGATTCCAAGACTATATGATAGAACATGGAATTCAATCTCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAAAGGAGAAATAGAACTTTGTTAGACATGGTTTGTTCAATGATGAGTTATGCTCAATTGTCTAGCTCGTTTTGGGGGTATGCAGTAGAGGCTGCAGTTCATATCTTGAACAATGTTCTCTCGAAGAGTGTTTCTGAAACACCTTTCGAGTTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCATACGTGTTAGTGACAAATCCCAAGAAGTTGGAACTTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGCTTGTATCGACAAATGCTACTTTTTTGGAAGAAGACCACATGATAGATCATAAACCACGAAACAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGTAGTGGGAGGGTTGTATCACAACCTAACCGTTATTTGGGTTTTACTGAAACTCAGGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCTTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTAAAATGGAGTCTATGTACTTCAATTCAGTGTGGAGCTTGTAGATCTACCTGAAGGGGTAAAACCTATAGGGTGTAAATGGATCTATAAGAGAAAGAGAGATTCAGTTGGGAAGGTATAGACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGACACTTTTTCCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTTCATCGCCATATTTTATGATTATGAAATATGGCAAATGGATGTCAAGATTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCTGAGGGGTTCACAACCCAAGGTCAAGAGCAAAAAGTTGGTAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACATTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGAATACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGATAAAATGTTGGTTCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGACATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGTAGTAGGAATAGTAAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGACGATTAAAATTATTCTCAAGTATCTTAGGAAAACGAGAGACTACATGCTTATGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACTCTGATTTCCAAACCGATAAGGATTCTAGAAAATCTACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTATAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTAA

mRNA sequence

ATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATTGGATCAGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAGAAGATGATTCATTACCTCCATGTGAATCTTGTCTTGAAGGAAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTCTGTGGTCCGATAAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTGTAGGTATGGTTATTTATACTTAATGGAGCATAAGTTTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATTTGATCGAGGTAGAGAGTACATGGATTTGAGATTCCAAGACTATATGATAGAACATGGAATTCAATCTCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAAAGGAGAAATAGAACTTTGTTAGACATGGTTTGTTCAATGATGAGTTATGCTCAATTGTCTAGCTCGTTTTGGGGGTATGCAGTAGAGGCTGCAGTTCATATCTTGAACAATGTTCTCTCGAAGAGTGTTTCTGAAACACCTTTCGAGTTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCATACGTGTTAGTGACAAATCCCAAGAAGTTGGAACTTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGCTTGTATCGACAAATGCTACTTTTTTGGAAGAAGACCACATGATAGATCATAAACCACGAAACAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGTAGTGGGAGGGTTGTATCACAACCTAACCGTTATTTGGGTTTTACTGAAACTCAGGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCTTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTAAAATGGAGTCTATGTACTTCAATTCAACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGACACTTTTTCCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTTCATCGCCATATTTTATGATTATGAAATATGGCAAATGGATGTCAAGATTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCTGAGGGGTTCACAACCCAAGGTCAAGAGCAAAAAGTTGGTAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACATTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGAATACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGATAAAATGTTGGTTCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGACATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGTAGTAGGAATAGTAAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGACGATTAAAATTATTCTCAAGTATCTTAGGAAAACGAGAGACTACATGCTTATGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACTCTGATTTCCAAACCGATAAGGATTCTAGAAAATCTACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTATAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTAA

Coding sequence (CDS)

ATGTTTAGAACTGCTAATACTCAAAATAAAAGGCAAAGAATTTCTCCAAATAACAATACCTATCTTTGGCATTTAAGATTAGGTCACATAAATCTCGATTGGATCAGGAGATTGGTAAAGAATGGACTTCTAAACAAGTTAGAAGATGATTCATTACCTCCATGTGAATCTTGTCTTGAAGGAAAAATGACAAAGAGACCTTTTACTGGAAAAGGTTATAGAGCCAAAGAGCCTTTAGAACTCTGTGGTCCGATAAATGTAAAAGCTAGAGGGGGTTTTGAATACTTCATCTCTTTTATAGATGATTATTGTAGGTATGGTTATTTATACTTAATGGAGCATAAGTTTGAAGCTCTTGAAAAGTTCAAGGAGTATAAGACTGAAGTTGAAAATCTATTAAGTAAAAAGATTAAAATACTTCGATTTGATCGAGGTAGAGAGTACATGGATTTGAGATTCCAAGACTATATGATAGAACATGGAATTCAATCTCAACTCTCAGCACCTGGTACACCTCAACAAAATGGTGTATCAGAAAGGAGAAATAGAACTTTGTTAGACATGGTTTGTTCAATGATGAGTTATGCTCAATTGTCTAGCTCGTTTTGGGGGTATGCAGTAGAGGCTGCAGTTCATATCTTGAACAATGTTCTCTCGAAGAGTGTTTCTGAAACACCTTTCGAGTTATGGAGAGGACGTAAACCTAGTTTAAGTCATTTCAGAATTTGGGGTTGTCCAGCATACGTGTTAGTGACAAATCCCAAGAAGTTGGAACTTCGTTCAAGGTTATGCCAATTTGTTGGTTACCCTAAAGAGACGAGAGGTGGTCTATTCTTCGATCCACAAGAAAATAGAGTGCTTGTATCGACAAATGCTACTTTTTTGGAAGAAGACCACATGATAGATCATAAACCACGAAACAAATTAGTATTAAATGAAGCTACTGATGAATCAACAAGGGTTGTTGATGAAGTTGGTCCCTCATCAAGAGTTGATGAAACCACCACATCAGGTCAATCTCATCCTTCTCAATCATTGAGAATGCCTCGACGTAGTGGGAGGGTTGTATCACAACCTAACCGTTATTTGGGTTTTACTGAAACTCAGGTTGTCATACCAGATGATGGTGTTGAGGATCCATTGTCTTATAAACAGGCAATGAATGATGTAGATAAGGACCAATGGGTCAAAGCCATGGACCTTAAAATGGAGTCTATGTACTTCAATTCAACCTTCAAAGCTAGACTTGTAGCAAAAGGGTATACCCAAAGGGAAGGGGTTGACTATGAGGACACTTTTTCCCCTGTTGCTATGTTAAAGTCTATAAGGATTCTCTTGTTCATCGCCATATTTTATGATTATGAAATATGGCAAATGGATGTCAAGATTGCTTTTCTGAATGGCAATCTTGAAGAGAGTATCTTTATGTCTCAGCCTGAGGGGTTCACAACCCAAGGTCAAGAGCAAAAAGTTGGTAAGCTGAATCGATCCATTTATGGGTTGAAACAAGCATCTAGATCTTGGAACATTAGGTTTGATACTGCGATCAAATCCTACGGTTTTGACCAAAACGTTGATGAACATTGTGTATATAAGAAAATCAACAAAGGAAAAGTAGCTTTCTTAGTACTTTATGTGGACGATATCCTCCTCATTGGGAATGATGTGGAATACCTTACTGACGTTAAAGCTTGGCTAGCAGCCCAATTCCAAATGAAAGATTTAGGAGAGGCACAATATGTTCTTGGAATCCAAATCATAAGGGATCGTAAGAACAAAACGCTAGCACTGTCTCAAGCAACCTATATCGATAAAATGTTGGTTCGATATTTGATGCAGAACTCTAAGAAGGGTTTATTACCTTTCAGACATGGGGTTCACTTGTCTAAGGAACAGTGTCCTAAGACACCTCAAGAAGTTGAGGATATGAGACGTATTCCCTATGCCTCAGCTGTGGGCAGCTTAATGTATGCTATGCTCTGCACTAGGCCAGACATTTGTTATGTAGTAGGAATAGTAAGTAGGTATCAGTCCAACCCAGGGTTAGACCACTGGACGACGATTAAAATTATTCTCAAGTATCTTAGGAAAACGAGAGACTACATGCTTATGTATGGAGCTAAGGATTTGATCCTTACAGGATACACTGACTCTGATTTCCAAACCGATAAGGATTCTAGAAAATCTACATCGGGATCAGTGTTCACCCTAAATGGGGGAGCTGTAGTATGGCGTAGCATCAAGCAAGGATGCATTGCAGACTCTATAATGGAGGCTGAATACGTCGCTGCTTGTGAAGCAGCAAAAGAAGCAGTTTAA

Protein sequence

MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLELCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLKMESMYFNSTFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAIFYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKIILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSIMEAEYVAACEAAKEAV

Homology

[Close]

BLAST of Cmc09g0248381 vs. NCBI nr
Match: KAA0025945.1 (gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0035786.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0040492.1 gag/pol protein [Cucumis melo var. makuwa] >KAA0041262.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1447.6 bits (3746), Expect = 0.0e+00
Identity = 732/808 (90.59%), Postives = 745/808 (92.20%), Query Frame = 0


Query: 1    MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLE 60
            MFRTANTQNKRQRISPNNNTYLWHLRLGHINLD I RLVKNGLLNKL+D SLPPCESCLE
Sbjct: 329  MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLE 388

Query: 61   GKMTKRPFTGKGYRAKEPLE-----LCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHK 120
            GKMTKRPFTGKGYRAKEPLE     LCGP+NVKARGGFEYFISFIDDY RYGYLYLMEHK
Sbjct: 389  GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHK 448

Query: 121  FEALEKFKEYKTEVENLLSKKIKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQN 180
             EALEKFKEYKTEVENLLSKKIKILR DRG EYMDLRFQDYMIEHGIQSQLSAPGTPQQN
Sbjct: 449  SEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQN 508

Query: 181  GVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKP 240
            GVSERRNRTLLDMV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKP
Sbjct: 509  GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKP 568

Query: 241  SLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFL 300
            SLSHFRIWGCPA+VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRV VSTNATFL
Sbjct: 569  SLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL 628

Query: 301  EEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV 360
            EEDHM +HKPR+KLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV
Sbjct: 629  EEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV 688

Query: 361  VSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLKMESMYFNS----- 420
            VSQPNRYLG TETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDL+MESMYFNS     
Sbjct: 689  VSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV 748

Query: 421  --------------------------TFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRI 480
                                      TFKARLVAKGYTQREGVDYE+TFSPVAMLKSIRI
Sbjct: 749  DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRI 808

Query: 481  LLFIAIFYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQA 540
            LL IA FYDYEIWQMDVK AFLNGNLEESIFMSQPEGF TQGQEQKV KLNRSIYGLKQA
Sbjct: 809  LLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQA 868

Query: 541  SRSWNIRFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKA 600
            SRSWNIRFDTAIKSYGFDQNVDE CVYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKA
Sbjct: 869  SRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKA 928

Query: 601  WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRH 660
            WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQNSKKGLLPFRH
Sbjct: 929  WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH 988

Query: 661  GVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDH 720
            GVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDH
Sbjct: 989  GVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDH 1048

Query: 721  WTTIKIILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW 773
            WT +KI+LKYLR+TRDYML+YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW
Sbjct: 1049 WTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW 1108

[Close]

BLAST of Cmc09g0248381 vs. NCBI nr
Match: KAA0035907.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1424.5 bits (3686), Expect = 0.0e+00
Identity = 722/808 (89.36%), Postives = 739/808 (91.46%), Query Frame = 0


Query: 1    MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLE 60
            MFRTANTQNKRQRISPNNNTYLWHLRLGHINLD I RLVK+GLLNKL+D SLPPCESCLE
Sbjct: 329  MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLE 388

Query: 61   GKMTKRPFTGKGYRAKEPLE-----LCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHK 120
            GKMTKRPFTGKGYRAKEPLE     LCGP+NVKARG FEYFISFIDDY RYGYLYLMEHK
Sbjct: 389  GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHK 448

Query: 121  FEALEKFKEYKTEVENLLSKKIKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQN 180
             EALEKFKEYKTEVENLLSKKIKI R DRG EYMDL FQDYMIEHGIQSQLSAPGTPQQN
Sbjct: 449  SEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQN 508

Query: 181  GVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKP 240
            GVSERRNRTLLDMV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKP
Sbjct: 509  GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKP 568

Query: 241  SLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFL 300
            SLSHFRIWGCPA+VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDP+ENRV VSTNATFL
Sbjct: 569  SLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFL 628

Query: 301  EEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV 360
            EEDHM +HKPR+KLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV
Sbjct: 629  EEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV 688

Query: 361  VSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLKMESMYFNS----- 420
            VSQPNRYLG TETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDL+MESMYFNS     
Sbjct: 689  VSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV 748

Query: 421  --------------------------TFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRI 480
                                      TFKARLVAKGYT++EGVDYE+TFS VAMLKSIRI
Sbjct: 749  DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRI 808

Query: 481  LLFIAIFYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQA 540
            LL IA FYDYEIWQMDVK AFLNGNLEESIFMSQPEGF TQGQEQKV KLNRSIYGLKQA
Sbjct: 809  LLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQA 868

Query: 541  SRSWNIRFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKA 600
            SRSWNIRFDTAIKSYGFDQNVDE CVYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKA
Sbjct: 869  SRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKA 928

Query: 601  WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRH 660
            WLAAQFQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQNSKKGLLPFRH
Sbjct: 929  WLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH 988

Query: 661  GVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDH 720
            GVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDH
Sbjct: 989  GVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDH 1048

Query: 721  WTTIKIILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW 773
            WT +KIILKYLR+TRDYML+YGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVW
Sbjct: 1049 WTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVW 1108

[Close]

BLAST of Cmc09g0248381 vs. NCBI nr
Match: KAA0059226.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1393.6 bits (3606), Expect = 0.0e+00
Identity = 706/783 (90.17%), Postives = 720/783 (91.95%), Query Frame = 0


Query: 26   RLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLE----- 85
            +LGHINLD I RLVKNGLLNKL+D SLPPCESCLEGKMTKRPFTGKGYRAKEPLE     
Sbjct: 228  KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287

Query: 86   LCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKIL 145
            LCGP+NVKARGGFEYFISFIDDY RYGYLYLMEHK EALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288  LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347

Query: 146  RFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSS 205
            R DRG EYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMV SMMSYAQL S
Sbjct: 348  RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407

Query: 206  SFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELR 265
            SFWGYAVE AVHILNNV SKSVSETPFELWRGRKPSLSHFRIWGCPA+VLVTNPKKLE R
Sbjct: 408  SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467

Query: 266  SRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTR 325
            SRLCQFVGYPKETRGGLFFDPQENRV VSTNATFLEEDHM +HKPR+KLVL+EATDESTR
Sbjct: 468  SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527

Query: 326  VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDP 385
            VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLG TETQVVIPDDGVEDP
Sbjct: 528  VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587

Query: 386  LSYKQAMNDVDKDQWVKAMDLKMESMYFNS------------------------------ 445
            LSYKQAMNDVDKDQWVKAMDL+MESMYFNS                              
Sbjct: 588  LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647

Query: 446  -TFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAIFYDYEIWQMDVKIAFLNGN 505
             TFKARLVAKGYTQREGVDYE+TFSPVAMLKSIRILL IA FYDYEIWQMDVK AFLNGN
Sbjct: 648  QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707

Query: 506  LEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEHC 565
            LEESIFMSQPEGF TQGQEQKV KLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDE C
Sbjct: 708  LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 767

Query: 566  VYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 625
            VYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD
Sbjct: 768  VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 827

Query: 626  RKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYA 685
            RKNKTLALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYA
Sbjct: 828  RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA 887

Query: 686  SAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKIILKYLRKTRDYMLMYGAKD 745
            SAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDHWT +KI+LKYLR+TRDYML+YGAKD
Sbjct: 888  SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD 947

Query: 746  LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSIMEAEYVAACEAAK 773
            LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADS MEAEYVAACEAAK
Sbjct: 948  LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 1007

[Close]

BLAST of Cmc09g0248381 vs. NCBI nr
Match: KAA0062886.1 (gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1374.8 bits (3557), Expect = 0.0e+00
Identity = 694/742 (93.53%), Postives = 698/742 (94.07%), Query Frame = 0


Query: 36  RRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLE-----LCGPINVKAR 95
           +RLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLE     LCGPINVKAR
Sbjct: 227 KRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPINVKAR 286

Query: 96  GGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKILRFDRGREYMD 155
           GGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKILRFDRGREYMD
Sbjct: 287 GGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKILRFDRGREYMD 346

Query: 156 LRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAA 215
           LRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAA
Sbjct: 347 LRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAA 406

Query: 216 VHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYP 275
           VHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYP
Sbjct: 407 VHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYP 466

Query: 276 KETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSR 335
           KETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSR
Sbjct: 467 KETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSR 526

Query: 336 VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDV 395
           VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDV
Sbjct: 527 VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDV 586

Query: 396 DKDQWVKAMDLKMESMYFNSTFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAI 455
           DKDQWVKAM+LKMES+         LVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAI
Sbjct: 587 DKDQWVKAMNLKMESI---------LVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAI 646

Query: 456 FYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNI 515
           FYDYEIWQMDVKIAFLNGNLEESIFMSQPEG                             
Sbjct: 647 FYDYEIWQMDVKIAFLNGNLEESIFMSQPEG----------------------------- 706

Query: 516 RFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQF 575
            FDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQF
Sbjct: 707 -FDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQF 766

Query: 576 QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSK 635
           QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSK
Sbjct: 767 QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSK 826

Query: 636 EQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKI 695
           EQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKI
Sbjct: 827 EQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKI 886

Query: 696 ILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG 755
           ILKYLR+TRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG
Sbjct: 887 ILKYLRRTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG 929

Query: 756 CIADSIMEAEYVAACEAAKEAV 773
           CIADSIMEAEYVAACEAAKEAV
Sbjct: 947 CIADSIMEAEYVAACEAAKEAV 929

[Close]

BLAST of Cmc09g0248381 vs. NCBI nr
Match: KAA0033121.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1288.9 bits (3334), Expect = 0.0e+00
Identity = 654/746 (87.67%), Postives = 673/746 (90.21%), Query Frame = 0


Query: 63  MTKRPFTGKGYRAKEPLE-----LCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFE 122
           MTKRPFTGKGYRAKEPLE     LCGP+NVKARGGFEYFISFIDDY RYGYLYLMEHK E
Sbjct: 1   MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSE 60

Query: 123 ALEKFKEYKTEVENLLSKKIKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGV 182
           ALEKFKEYK EVENLLSKKIKILR DRG EYMDLRFQDYMIEHGIQ QLSAPGTPQQNGV
Sbjct: 61  ALEKFKEYKNEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQIQLSAPGTPQQNGV 120

Query: 183 SERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKPSL 242
            ERRNRT+LDMV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKPSL
Sbjct: 121 LERRNRTMLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVSSKSVSETPFELWRGRKPSL 180

Query: 243 SHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLEE 302
           SHF+I GCPA+VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQ+NRVLVSTNATFLEE
Sbjct: 181 SHFKILGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQKNRVLVSTNATFLEE 240

Query: 303 DHMIDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 362
           DHM DHKP+NKLVLNEA DESTRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRRSGR+VS
Sbjct: 241 DHMRDHKPQNKLVLNEAIDESTRVVDEVGPSSRVNETTTSGQSHPSQSLRMPRRSGRIVS 300

Query: 363 QPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLKMESMYFN-------- 422
           QPNRYLG TETQVVIPDDGVEDPLSY QAMNDVDKDQWVKAMDL+MESMYFN        
Sbjct: 301 QPNRYLGLTETQVVIPDDGVEDPLSYNQAMNDVDKDQWVKAMDLEMESMYFNLMWELVDL 360

Query: 423 -----------------------STFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILL 482
                                   TFKARLVAKGYTQREGVDYE+TFSPVAMLKSIRILL
Sbjct: 361 PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL 420

Query: 483 FIAIFYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASR 542
            IA FYDYEIW+MDV  AFLNGNLEESIFMSQPEGF TQGQEQKV KLNRSIYGLKQASR
Sbjct: 421 SIATFYDYEIWKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 480

Query: 543 SWNIRFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWL 602
           SWNIRFDTAIKSYGF+QNVDE CVYKKINKGKV FLVLYVDDILLIGNDV YLTDVKAWL
Sbjct: 481 SWNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGNDVGYLTDVKAWL 540

Query: 603 AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGV 662
           AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRY MQNSKKGLLPFRHGV
Sbjct: 541 AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGV 600

Query: 663 HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWT 722
           HLSKEQCPKTPQEVEDMRRIPYASAVGSLMY + CTR +ICY V IVSRYQSN GLDHWT
Sbjct: 601 HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVIFCTRLEICYAVRIVSRYQSNLGLDHWT 660

Query: 723 TIKIILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS 773
            +KIILKYLR+TRDYML+YGAKDLILTGYTDSDFQT+KDSRKSTS SVFTLNGGA+VWRS
Sbjct: 661 AVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTNKDSRKSTSRSVFTLNGGAIVWRS 720

[Close]

BLAST of Cmc09g0248381 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 555.4 bits (1430), Expect = 9.8e-157
Identity = 313/817 (38.31%), Postives = 475/817 (58.14%), Query Frame = 0


Query: 22   LWHLRLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLEL 81
            LWH R+GH++   ++ L K  L++  +  ++ PC+ CL GK  +  F     R    L+L
Sbjct: 424  LWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILDL 483

Query: 82   -----CGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKK 141
                 CGP+ +++ GG +YF++FIDD  R  ++Y+++ K +  + F+++   VE    +K
Sbjct: 484  VYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGRK 543

Query: 142  IKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYA 201
            +K LR D G EY    F++Y   HGI+ + + PGTPQ NGV+ER NRT+++ V SM+  A
Sbjct: 544  LKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRMA 603

Query: 202  QLSSSFWGYAVEAAVHILNNVLSKSVS-ETPFELWRGRKPSLSHFRIWGCPAYVLVTNPK 261
            +L  SFWG AV+ A +++N   S  ++ E P  +W  ++ S SH +++GC A+  V   +
Sbjct: 604  KLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKEQ 663

Query: 262  --KLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLEEDHM----IDHKPRNKL 321
              KL+ +S  C F+GY  E  G   +DP + +V+ S +  F E +      +  K +N +
Sbjct: 664  RTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMSEKVKNGI 723

Query: 322  VLNEATDESTRVVDEVGPSSRVDETTTSGQ-------------------SHPSQSLRMP- 381
            + N  T  ST   +     S  DE +  G+                    HP+Q      
Sbjct: 724  IPNFVTIPSTS-NNPTSAESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPTQGEEQHQ 783

Query: 382  --RRSGRVVSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLKMESMY 441
              RRS R   +  RY   +   V+I DD   +P S K+ ++  +K+Q +KAM  +MES+ 
Sbjct: 784  PLRRSERPRVESRRYP--STEYVLISDD--REPESLKEVLSHPEKNQLMKAMQEEMESLQ 843

Query: 442  FNST-------------------------------FKARLVAKGYTQREGVDYEDTFSPV 501
             N T                               +KARLV KG+ Q++G+D+++ FSPV
Sbjct: 844  KNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDEIFSPV 903

Query: 502  AMLKSIRILLFIAIFYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNR 561
              + SIR +L +A   D E+ Q+DVK AFL+G+LEE I+M QPEGF   G++  V KLN+
Sbjct: 904  VKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNK 963

Query: 562  SIYGLKQASRSWNIRFDTAIKSYGFDQNVDEHCVY-KKINKGKVAFLVLYVDDILLIGND 621
            S+YGLKQA R W ++FD+ +KS  + +   + CVY K+ ++     L+LYVDD+L++G D
Sbjct: 964  SLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKD 1023

Query: 622  VEYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNS 681
               +  +K  L+  F MKDLG AQ +LG++I+R+R ++ L LSQ  YI+++L R+ M+N+
Sbjct: 1024 KGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNA 1083

Query: 682  KKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSR 741
            K    P    + LSK+ CP T +E  +M ++PY+SAVGSLMYAM+CTRPDI + VG+VSR
Sbjct: 1084 KPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSR 1143

Query: 742  YQSNPGLDHWTTIKIILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVF 773
            +  NPG +HW  +K IL+YLR T    L +G  D IL GYTD+D   D D+RKS++G +F
Sbjct: 1144 FLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSDPILKGYTDADMAGDIDNRKSSTGYLF 1203

[Close]

BLAST of Cmc09g0248381 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 369.4 bits (947), Expect = 1.0e-100
Identity = 274/919 (29.82%), Postives = 434/919 (47.23%), Query Frame = 0


Query: 18   NNTYLWHLRLGHIN---LDWIRR---LVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGK 77
            NN  LWH R GHI+   L  I+R        LLN LE  S   CE CL GK  + PF   
Sbjct: 413  NNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLE-LSCEICEPCLNGKQARLPFKQL 472

Query: 78   GYRA--KEPL-----ELCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKE 137
              +   K PL     ++CGPI         YF+ F+D +  Y   YL+++K +    F++
Sbjct: 473  KDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQD 532

Query: 138  YKTEVENLLSKKIKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRT 197
            +  + E   + K+  L  D GREY+    + + ++ GI   L+ P TPQ NGVSER  RT
Sbjct: 533  FVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRT 592

Query: 198  LLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSV---SETPFELWRGRKPSLSHFR 257
            + +   +M+S A+L  SFWG AV  A +++N + S+++   S+TP+E+W  +KP L H R
Sbjct: 593  ITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLR 652

Query: 258  IWGCPAYVLVTNPK-KLELRSRLCQFVGYPKETRGGLFFD-------------------- 317
            ++G   YV + N + K + +S    FVGY  E  G   +D                    
Sbjct: 653  VFGATVYVHIKNKQGKFDDKSFKSIFVGY--EPNGFKLWDAVNEKFIVARDVVVDETNMV 712

Query: 318  -----------------------PQENRVLVST----------NATFLEE---------- 377
                                   P ++R ++ T          N  FL++          
Sbjct: 713  NSRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFP 772

Query: 378  ---------------------DHMIDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTT 437
                                   + D K  NK  LNE+  +  +  D +  S        
Sbjct: 773  NDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNES--KKRKRDDHLNESKGSGNPNE 832

Query: 438  SGQSHPSQSLR---------------MPRRSGRVVSQPNRYLGFTE-----TQVVIPDDG 497
            S +S  ++ L+               + RRS R+ ++P   + + E      +VV+    
Sbjct: 833  SRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQ--ISYNEEDNSLNKVVLNAHT 892

Query: 498  V--EDPLSYKQAMNDVDKDQWVKAMDLKMESMYFNST----------------------- 557
            +  + P S+ +     DK  W +A++ ++ +   N+T                       
Sbjct: 893  IFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKY 952

Query: 558  --------FKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAIFYDYEIWQMDVKI 617
                    +KARLVA+G+TQ+  +DYE+TF+PVA + S R +L + I Y+ ++ QMDVK 
Sbjct: 953  NELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKT 1012

Query: 618  AFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQ 677
            AFLNG L+E I+M  P+G +       V KLN++IYGLKQA+R W   F+ A+K   F  
Sbjct: 1013 AFLNGTLKEEIYMRLPQGISC--NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVN 1072

Query: 678  NVDEHCVY--KKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDLGEAQYV 737
            +  + C+Y   K N  +  +++LYVDD+++   D+  + + K +L  +F+M DL E ++ 
Sbjct: 1073 SSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHF 1132

Query: 738  LGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHL----SKEQCPKTP 773
            +GI+I  + +   + LSQ+ Y+ K+L ++ M+N      P    ++     S E C    
Sbjct: 1133 IGIRI--EMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDC---- 1192

[Close]

BLAST of Cmc09g0248381 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.4e-83
Identity = 248/916 (27.07%), Postives = 391/916 (42.69%), Query Frame = 0


Query: 23   WHLRLGHINLDWIRRLVKNGLLNKLE-DDSLPPCESCLEGKMTKRPFTGKGYRAKEPLEL 82
            WH RLGH +L  +  ++ N  L  L     L  C  C   K  K PF+     + +PLE 
Sbjct: 446  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEY 505

Query: 83   ----CGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKI 142
                     + +   + Y++ F+D + RY +LY ++ K +  + F  +K+ VEN    +I
Sbjct: 506  IYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRI 565

Query: 143  KILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQ 202
              L  D G E++ LR  DY+ +HGI    S P TP+ NG+SER++R +++M  +++S+A 
Sbjct: 566  GTLYSDNGGEFVVLR--DYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHAS 625

Query: 203  LSSSFWGYAVEAAVHILNNVLSKSVS-ETPFELWRGRKPSLSHFRIWGCPAYVLVT--NP 262
            +  ++W YA   AV+++N + +  +  ++PF+   G+ P+    +++GC  Y  +   N 
Sbjct: 626  VPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNR 685

Query: 263  KKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLE---------------EDH 322
             KLE +S+ C F+GY       L       R+  S +  F E               ++ 
Sbjct: 686  HKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQ 745

Query: 323  MIDHKPR---------NKLV------LNEATDES------------TRVVDEVGPSSRVD 382
              D  P            LV      L    D S            T+V     PSS + 
Sbjct: 746  RSDSAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSIS 805

Query: 383  ETTTSGQSHPSQS--------------------LRMPRRSGRVVSQPNRYLGFTETQVVI 442
              ++S  + PS +                    L  P  +    + PN+     ++ +  
Sbjct: 806  SPSSSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNSPNQNSPLPQSPISS 865

Query: 443  P----------------------------------------------------DDGVEDP 502
            P                                                     DG+  P
Sbjct: 866  PHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKP 925

Query: 503  ---LSY----------KQAMNDVDKDQWVKAMDLKMESMYFNST---------------- 562
                SY          + A+  +  D+W +AM  ++ +   N T                
Sbjct: 926  NQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGC 985

Query: 563  ----------------FKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAIFYDYE 622
                            +KARLVAKGY QR G+DY +TFSPV    SIRI+L +A+   + 
Sbjct: 986  RWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWP 1045

Query: 623  IWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNIRFDTA 682
            I Q+DV  AFL G L + ++MSQP GF  + +   V +L ++IYGLKQA R+W +   T 
Sbjct: 1046 IRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTY 1105

Query: 683  IKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDL 742
            + + GF  ++ +  ++       + ++++YVDDIL+ GND   L      L+ +F +K+ 
Sbjct: 1106 LLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEH 1165

Query: 743  GEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPK 771
             +  Y LGI+    R  + L LSQ  Y   +L R  M  +K    P      L+     K
Sbjct: 1166 EDLHYFLGIE--AKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTK 1225

[Close]

BLAST of Cmc09g0248381 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.5e-80
Identity = 246/912 (26.97%), Postives = 375/912 (41.12%), Query Frame = 0


Query: 23   WHLRLGHINLDWIRRLVKNGLLNKLE-DDSLPPCESCLEGKMTKRPFTGKGYRAKEPLEL 82
            WH RLGH     +  ++ N  L+ L        C  CL  K  K PF+     +  PLE 
Sbjct: 467  WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 526

Query: 83   ----CGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKI 142
                     + +   + Y++ F+D + RY +LY ++ K +  E F  +K  +EN    +I
Sbjct: 527  IYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 586

Query: 143  KILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQ 202
                 D G E++ L   +Y  +HGI    S P TP+ NG+SER++R +++   +++S+A 
Sbjct: 587  GTFYSDNGGEFVAL--WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHAS 646

Query: 203  LSSSFWGYAVEAAVHILNNVLSKSVS-ETPFELWRGRKPSLSHFRIWGCPAYVLVT--NP 262
            +  ++W YA   AV+++N + +  +  E+PF+   G  P+    R++GC  Y  +   N 
Sbjct: 647  IPKTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQ 706

Query: 263  KKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLE------------------ 322
             KL+ +SR C F+GY       L    Q +R+ +S +  F E                  
Sbjct: 707  HKLDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQ 766

Query: 323  ---------------------------EDHMIDHKP-------RNKLVLNEATDES---- 382
                                       + H     P       RN  V +   D S    
Sbjct: 767  RRESSCVWSPHTTLPTRTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSS 826

Query: 383  ------TRVVDEVGPSSRVDETTTSGQSHPS-----------------QSLRMPRRSGRV 442
                       + GP      T T  Q+H S                 QSL  P +S   
Sbjct: 827  FPSSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSS 886

Query: 443  VSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMND-------------------------- 502
               P      + T    P   +  P    Q +N+                          
Sbjct: 887  SPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKY 946

Query: 503  ------------------VDKDQWVKAMDLKMESMYFNST-------------------- 562
                              +  ++W  AM  ++ +   N T                    
Sbjct: 947  SLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIF 1006

Query: 563  ------------FKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAIFYDYEIWQM 622
                        +KARLVAKGY QR G+DY +TFSPV    SIRI+L +A+   + I Q+
Sbjct: 1007 TKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQL 1066

Query: 623  DVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNIRFDTAIKSY 682
            DV  AFL G L + ++MSQP GF  + +   V KL +++YGLKQA R+W +     + + 
Sbjct: 1067 DVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTI 1126

Query: 683  GFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDLGEAQ 742
            GF  +V +  ++       + ++++YVDDIL+ GND   L +    L+ +F +KD  E  
Sbjct: 1127 GFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELH 1186

Query: 743  YVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQE 771
            Y LGI+    R    L LSQ  YI  +L R  M  +K    P      LS     K    
Sbjct: 1187 YFLGIE--AKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDP 1246

[Close]

BLAST of Cmc09g0248381 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 151.0 bits (380), Expect = 5.6e-35
Identity = 105/314 (33.44%), Postives = 145/314 (46.18%), Query Frame = 0


Query: 459 MDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNIRFDTAIKS 518
           MDV  AFLN  ++E I++ QP GF  +     V +L   +YGLKQA   WN   +  +K 
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 519 YGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDLGEA 578
            GF ++  EH +Y +       ++ +YVDD+L+     +    VK  L   + MKDLG+ 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 579 QYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQ 638
              LG+  I    N  + LS   YI K      +   K    P  +    SK     T  
Sbjct: 121 DKFLGLN-IHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCN----SKPLFETTSP 180

Query: 639 EVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKIILKYLRKT 698
            ++D+   PY S VG L++     RPDI Y V ++SR+   P   H  + + +L+YL  T
Sbjct: 181 HLKDI--TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTT 240

Query: 699 RDYMLMY-GAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIK-QGCIADSI 758
           R   L Y     L LT Y D+      D   ST G V  L G  V W S K +G I    
Sbjct: 241 RSMCLKYRSGSQLALTVYCDASHGAIHDLPHSTGGYVTLLAGAPVTWSSKKLKGVIPVPS 300

Query: 759 MEAEYVAACEAAKE 771
            EAEY+ A E   E
Sbjct: 301 TEAEYITASETVME 307

[Close]

BLAST of Cmc09g0248381 vs. ExPASy TrEMBL
Match: A0A5A7TZD0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G00090 PE=4 SV=1)

HSP 1 Score: 1447.6 bits (3746), Expect = 0.0e+00
Identity = 732/808 (90.59%), Postives = 745/808 (92.20%), Query Frame = 0


Query: 1    MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLE 60
            MFRTANTQNKRQRISPNNNTYLWHLRLGHINLD I RLVKNGLLNKL+D SLPPCESCLE
Sbjct: 329  MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLE 388

Query: 61   GKMTKRPFTGKGYRAKEPLE-----LCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHK 120
            GKMTKRPFTGKGYRAKEPLE     LCGP+NVKARGGFEYFISFIDDY RYGYLYLMEHK
Sbjct: 389  GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHK 448

Query: 121  FEALEKFKEYKTEVENLLSKKIKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQN 180
             EALEKFKEYKTEVENLLSKKIKILR DRG EYMDLRFQDYMIEHGIQSQLSAPGTPQQN
Sbjct: 449  SEALEKFKEYKTEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQN 508

Query: 181  GVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKP 240
            GVSERRNRTLLDMV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKP
Sbjct: 509  GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKP 568

Query: 241  SLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFL 300
            SLSHFRIWGCPA+VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQENRV VSTNATFL
Sbjct: 569  SLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFL 628

Query: 301  EEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV 360
            EEDHM +HKPR+KLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV
Sbjct: 629  EEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV 688

Query: 361  VSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLKMESMYFNS----- 420
            VSQPNRYLG TETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDL+MESMYFNS     
Sbjct: 689  VSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV 748

Query: 421  --------------------------TFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRI 480
                                      TFKARLVAKGYTQREGVDYE+TFSPVAMLKSIRI
Sbjct: 749  DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRI 808

Query: 481  LLFIAIFYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQA 540
            LL IA FYDYEIWQMDVK AFLNGNLEESIFMSQPEGF TQGQEQKV KLNRSIYGLKQA
Sbjct: 809  LLSIATFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQA 868

Query: 541  SRSWNIRFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKA 600
            SRSWNIRFDTAIKSYGFDQNVDE CVYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKA
Sbjct: 869  SRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKA 928

Query: 601  WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRH 660
            WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQNSKKGLLPFRH
Sbjct: 929  WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH 988

Query: 661  GVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDH 720
            GVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDH
Sbjct: 989  GVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDH 1048

Query: 721  WTTIKIILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW 773
            WT +KI+LKYLR+TRDYML+YGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW
Sbjct: 1049 WTAVKIVLKYLRRTRDYMLVYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW 1108

[Close]

BLAST of Cmc09g0248381 vs. ExPASy TrEMBL
Match: A0A5A7T2V9 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760 PE=4 SV=1)

HSP 1 Score: 1424.5 bits (3686), Expect = 0.0e+00
Identity = 722/808 (89.36%), Postives = 739/808 (91.46%), Query Frame = 0


Query: 1    MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLE 60
            MFRTANTQNKRQRISPNNNTYLWHLRLGHINLD I RLVK+GLLNKL+D SLPPCESCLE
Sbjct: 329  MFRTANTQNKRQRISPNNNTYLWHLRLGHINLDRIGRLVKDGLLNKLKDVSLPPCESCLE 388

Query: 61   GKMTKRPFTGKGYRAKEPLE-----LCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHK 120
            GKMTKRPFTGKGYRAKEPLE     LCGP+NVKARG FEYFISFIDDY RYGYLYLMEHK
Sbjct: 389  GKMTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGSFEYFISFIDDYSRYGYLYLMEHK 448

Query: 121  FEALEKFKEYKTEVENLLSKKIKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQN 180
             EALEKFKEYKTEVENLLSKKIKI R DRG EYMDL FQDYMIEHGIQSQLSAPGTPQQN
Sbjct: 449  SEALEKFKEYKTEVENLLSKKIKIFRSDRGGEYMDLIFQDYMIEHGIQSQLSAPGTPQQN 508

Query: 181  GVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKP 240
            GVSERRNRTLLDMV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKP
Sbjct: 509  GVSERRNRTLLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVPSKSVSETPFELWRGRKP 568

Query: 241  SLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFL 300
            SLSHFRIWGCPA+VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDP+ENRV VSTNATFL
Sbjct: 569  SLSHFRIWGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPKENRVFVSTNATFL 628

Query: 301  EEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV 360
            EEDHM +HKPR+KLVL+EATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV
Sbjct: 629  EEDHMRNHKPRSKLVLSEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRV 688

Query: 361  VSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLKMESMYFNS----- 420
            VSQPNRYLG TETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDL+MESMYFNS     
Sbjct: 689  VSQPNRYLGLTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELV 748

Query: 421  --------------------------TFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRI 480
                                      TFKARLVAKGYT++EGVDYE+TFS VAMLKSIRI
Sbjct: 749  DLPEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTRKEGVDYEETFSSVAMLKSIRI 808

Query: 481  LLFIAIFYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQA 540
            LL IA FYDYEIWQMDVK AFLNGNLEESIFMSQPEGF TQGQEQKV KLNRSIYGLKQA
Sbjct: 809  LLSIAKFYDYEIWQMDVKTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQA 868

Query: 541  SRSWNIRFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKA 600
            SRSWNIRFDTAIKSYGFDQNVDE CVYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKA
Sbjct: 869  SRSWNIRFDTAIKSYGFDQNVDEPCVYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKA 928

Query: 601  WLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRH 660
            WLAAQFQMKDLGE QYVLGIQIIRDRKNKTLALSQATYIDK+LVRY MQNSKKGLLPFRH
Sbjct: 929  WLAAQFQMKDLGEGQYVLGIQIIRDRKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRH 988

Query: 661  GVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDH 720
            GVHLSKEQ PKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDH
Sbjct: 989  GVHLSKEQSPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDH 1048

Query: 721  WTTIKIILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVW 773
            WT +KIILKYLR+TRDYML+YGAKDLILTGYT+SDFQTDKDSRKSTS SVFTLNGGAVVW
Sbjct: 1049 WTAVKIILKYLRRTRDYMLVYGAKDLILTGYTNSDFQTDKDSRKSTSRSVFTLNGGAVVW 1108

[Close]

BLAST of Cmc09g0248381 vs. ExPASy TrEMBL
Match: A0A5A7UYE8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G001570 PE=4 SV=1)

HSP 1 Score: 1393.6 bits (3606), Expect = 0.0e+00
Identity = 706/783 (90.17%), Postives = 720/783 (91.95%), Query Frame = 0


Query: 26   RLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLE----- 85
            +LGHINLD I RLVKNGLLNKL+D SLPPCESCLEGKMTKRPFTGKGYRAKEPLE     
Sbjct: 228  KLGHINLDRIGRLVKNGLLNKLKDVSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSD 287

Query: 86   LCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKIL 145
            LCGP+NVKARGGFEYFISFIDDY RYGYLYLMEHK EALEKFKEYKTEVENLLSKKIKIL
Sbjct: 288  LCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSEALEKFKEYKTEVENLLSKKIKIL 347

Query: 146  RFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSS 205
            R DRG EYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMV SMMSYAQL S
Sbjct: 348  RSDRGGEYMDLRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVRSMMSYAQLPS 407

Query: 206  SFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELR 265
            SFWGYAVE AVHILNNV SKSVSETPFELWRGRKPSLSHFRIWGCPA+VLVTNPKKLE R
Sbjct: 408  SFWGYAVETAVHILNNVPSKSVSETPFELWRGRKPSLSHFRIWGCPAHVLVTNPKKLEPR 467

Query: 266  SRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTR 325
            SRLCQFVGYPKETRGGLFFDPQENRV VSTNATFLEEDHM +HKPR+KLVL+EATDESTR
Sbjct: 468  SRLCQFVGYPKETRGGLFFDPQENRVFVSTNATFLEEDHMRNHKPRSKLVLSEATDESTR 527

Query: 326  VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDP 385
            VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLG TETQVVIPDDGVEDP
Sbjct: 528  VVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGLTETQVVIPDDGVEDP 587

Query: 386  LSYKQAMNDVDKDQWVKAMDLKMESMYFNS------------------------------ 445
            LSYKQAMNDVDKDQWVKAMDL+MESMYFNS                              
Sbjct: 588  LSYKQAMNDVDKDQWVKAMDLEMESMYFNSVWELVDLPEGVKPIGCKWIYKRKRDSAGKV 647

Query: 446  -TFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAIFYDYEIWQMDVKIAFLNGN 505
             TFKARLVAKGYTQREGVDYE+TFSPVAMLKSIRILL IA FYDYEIWQMDVK AFLNGN
Sbjct: 648  QTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILLSIATFYDYEIWQMDVKTAFLNGN 707

Query: 506  LEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEHC 565
            LEESIFMSQPEGF TQGQEQKV KLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDE C
Sbjct: 708  LEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDEPC 767

Query: 566  VYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 625
            VYKKINKGKVAFLVLYVDDILLIGNDV YLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD
Sbjct: 768  VYKKINKGKVAFLVLYVDDILLIGNDVGYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRD 827

Query: 626  RKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYA 685
            RKNKTLALSQATYIDK+LVRY MQNSKKGLLPFRHGVHLSKEQ PKTPQEVEDMRRIPYA
Sbjct: 828  RKNKTLALSQATYIDKLLVRYSMQNSKKGLLPFRHGVHLSKEQSPKTPQEVEDMRRIPYA 887

Query: 686  SAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKIILKYLRKTRDYMLMYGAKD 745
            SAVGSLMYAMLCTRPDICY VGIVSRYQSNPGLDHWT +KI+LKYLR+TRDYML+YGAKD
Sbjct: 888  SAVGSLMYAMLCTRPDICYAVGIVSRYQSNPGLDHWTAVKIVLKYLRRTRDYMLVYGAKD 947

Query: 746  LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSIMEAEYVAACEAAK 773
            LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADS MEAEYVAACEAAK
Sbjct: 948  LILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSTMEAEYVAACEAAK 1007

[Close]

BLAST of Cmc09g0248381 vs. ExPASy TrEMBL
Match: A0A5A7V8W0 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4427G00180 PE=4 SV=1)

HSP 1 Score: 1374.8 bits (3557), Expect = 0.0e+00
Identity = 694/742 (93.53%), Postives = 698/742 (94.07%), Query Frame = 0


Query: 36  RRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLE-----LCGPINVKAR 95
           +RLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLE     LCGPINVKAR
Sbjct: 227 KRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKEPLELIHSDLCGPINVKAR 286

Query: 96  GGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKILRFDRGREYMD 155
           GGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKILRFDRGREYMD
Sbjct: 287 GGFEYFISFIDDYCRYGYLYLMEHKFEALEKFKEYKTEVENLLSKKIKILRFDRGREYMD 346

Query: 156 LRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAA 215
           LRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAA
Sbjct: 347 LRFQDYMIEHGIQSQLSAPGTPQQNGVSERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAA 406

Query: 216 VHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYP 275
           VHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYP
Sbjct: 407 VHILNNVLSKSVSETPFELWRGRKPSLSHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYP 466

Query: 276 KETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSR 335
           KETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSR
Sbjct: 467 KETRGGLFFDPQENRVLVSTNATFLEEDHMIDHKPRNKLVLNEATDESTRVVDEVGPSSR 526

Query: 336 VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDV 395
           VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDV
Sbjct: 527 VDETTTSGQSHPSQSLRMPRRSGRVVSQPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDV 586

Query: 396 DKDQWVKAMDLKMESMYFNSTFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAI 455
           DKDQWVKAM+LKMES+         LVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAI
Sbjct: 587 DKDQWVKAMNLKMESI---------LVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAI 646

Query: 456 FYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASRSWNI 515
           FYDYEIWQMDVKIAFLNGNLEESIFMSQPEG                             
Sbjct: 647 FYDYEIWQMDVKIAFLNGNLEESIFMSQPEG----------------------------- 706

Query: 516 RFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQF 575
            FDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQF
Sbjct: 707 -FDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQF 766

Query: 576 QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSK 635
           QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSK
Sbjct: 767 QMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSK 826

Query: 636 EQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKI 695
           EQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKI
Sbjct: 827 EQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKI 886

Query: 696 ILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG 755
           ILKYLR+TRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG
Sbjct: 887 ILKYLRRTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQG 929

Query: 756 CIADSIMEAEYVAACEAAKEAV 773
           CIADSIMEAEYVAACEAAKEAV
Sbjct: 947 CIADSIMEAEYVAACEAAKEAV 929

[Close]

BLAST of Cmc09g0248381 vs. ExPASy TrEMBL
Match: A0A5D3CZY3 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G00460 PE=4 SV=1)

HSP 1 Score: 1288.9 bits (3334), Expect = 0.0e+00
Identity = 654/746 (87.67%), Postives = 673/746 (90.21%), Query Frame = 0


Query: 63  MTKRPFTGKGYRAKEPLE-----LCGPINVKARGGFEYFISFIDDYCRYGYLYLMEHKFE 122
           MTKRPFTGKGYRAKEPLE     LCGP+NVKARGGFEYFISFIDDY RYGYLYLMEHK E
Sbjct: 1   MTKRPFTGKGYRAKEPLELIHSDLCGPMNVKARGGFEYFISFIDDYSRYGYLYLMEHKSE 60

Query: 123 ALEKFKEYKTEVENLLSKKIKILRFDRGREYMDLRFQDYMIEHGIQSQLSAPGTPQQNGV 182
           ALEKFKEYK EVENLLSKKIKILR DRG EYMDLRFQDYMIEHGIQ QLSAPGTPQQNGV
Sbjct: 61  ALEKFKEYKNEVENLLSKKIKILRSDRGGEYMDLRFQDYMIEHGIQIQLSAPGTPQQNGV 120

Query: 183 SERRNRTLLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVSETPFELWRGRKPSL 242
            ERRNRT+LDMV SMMSYAQL SSFWGYAVE AVHILNNV SKSVSETPFELWRGRKPSL
Sbjct: 121 LERRNRTMLDMVRSMMSYAQLPSSFWGYAVETAVHILNNVSSKSVSETPFELWRGRKPSL 180

Query: 243 SHFRIWGCPAYVLVTNPKKLELRSRLCQFVGYPKETRGGLFFDPQENRVLVSTNATFLEE 302
           SHF+I GCPA+VLVTNPKKLE RSRLCQFVGYPKETRGGLFFDPQ+NRVLVSTNATFLEE
Sbjct: 181 SHFKILGCPAHVLVTNPKKLEPRSRLCQFVGYPKETRGGLFFDPQKNRVLVSTNATFLEE 240

Query: 303 DHMIDHKPRNKLVLNEATDESTRVVDEVGPSSRVDETTTSGQSHPSQSLRMPRRSGRVVS 362
           DHM DHKP+NKLVLNEA DESTRVVDEVGPSSRV+ETTTSGQSHPSQSLRMPRRSGR+VS
Sbjct: 241 DHMRDHKPQNKLVLNEAIDESTRVVDEVGPSSRVNETTTSGQSHPSQSLRMPRRSGRIVS 300

Query: 363 QPNRYLGFTETQVVIPDDGVEDPLSYKQAMNDVDKDQWVKAMDLKMESMYFN-------- 422
           QPNRYLG TETQVVIPDDGVEDPLSY QAMNDVDKDQWVKAMDL+MESMYFN        
Sbjct: 301 QPNRYLGLTETQVVIPDDGVEDPLSYNQAMNDVDKDQWVKAMDLEMESMYFNLMWELVDL 360

Query: 423 -----------------------STFKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILL 482
                                   TFKARLVAKGYTQREGVDYE+TFSPVAMLKSIRILL
Sbjct: 361 PEGVKPIGCKWIYKRKRDSAGKVQTFKARLVAKGYTQREGVDYEETFSPVAMLKSIRILL 420

Query: 483 FIAIFYDYEIWQMDVKIAFLNGNLEESIFMSQPEGFTTQGQEQKVGKLNRSIYGLKQASR 542
            IA FYDYEIW+MDV  AFLNGNLEESIFMSQPEGF TQGQEQKV KLNRSIYGLKQASR
Sbjct: 421 SIATFYDYEIWKMDVNTAFLNGNLEESIFMSQPEGFITQGQEQKVCKLNRSIYGLKQASR 480

Query: 543 SWNIRFDTAIKSYGFDQNVDEHCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWL 602
           SWNIRFDTAIKSYGF+QNVDE CVYKKINKGKV FLVLYVDDILLIGNDV YLTDVKAWL
Sbjct: 481 SWNIRFDTAIKSYGFEQNVDEPCVYKKINKGKVVFLVLYVDDILLIGNDVGYLTDVKAWL 540

Query: 603 AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGV 662
           AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRY MQNSKKGLLPFRHGV
Sbjct: 541 AAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQATYIDKMLVRYSMQNSKKGLLPFRHGV 600

Query: 663 HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWT 722
           HLSKEQCPKTPQEVEDMRRIPYASAVGSLMY + CTR +ICY V IVSRYQSN GLDHWT
Sbjct: 601 HLSKEQCPKTPQEVEDMRRIPYASAVGSLMYVIFCTRLEICYAVRIVSRYQSNLGLDHWT 660

Query: 723 TIKIILKYLRKTRDYMLMYGAKDLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRS 773
            +KIILKYLR+TRDYML+YGAKDLILTGYTDSDFQT+KDSRKSTS SVFTLNGGA+VWRS
Sbjct: 661 AVKIILKYLRRTRDYMLVYGAKDLILTGYTDSDFQTNKDSRKSTSRSVFTLNGGAIVWRS 720

[Close]

BLAST of Cmc09g0248381 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 208.4 bits (529), Expect = 2.1e-53
Identity = 127/364 (34.89%), Postives = 203/364 (55.77%), Query Frame = 0


Query: 412 FKARLVAKGYTQREGVDYEDTFSPVAMLKSIRILLFIAIFYDYEIWQMDVKIAFLNGNLE 471
           +KARLVAKGYTQ+EG+D+ +TFSPV  L S++++L I+  Y++ + Q+D+  AFLNG+L+
Sbjct: 146 YKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLD 205

Query: 472 ESIFMSQPEGFTT-QGQE---QKVGKLNRSIYGLKQASRSWNIRFDTAIKSYGFDQNVDE 531
           E I+M  P G+   QG       V  L +SIYGLKQASR W ++F   +  +GF Q+  +
Sbjct: 206 EEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSD 265

Query: 532 HCVYKKINKGKVAFLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDLGEAQYVLGIQII 591
           H  + KI       +++YVDDI++  N+   + ++K+ L + F+++DLG  +Y LG++I 
Sbjct: 266 HTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIA 325

Query: 592 RDRKNKTLALSQATYIDKMLVRYLMQNSKKGLLPFRHGVHLSKEQCPKTPQEVEDMRRIP 651
           R      + + Q  Y   +L    +   K   +P    V  S      +  +  D +   
Sbjct: 326 RSAAG--INICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH----SGGDFVDAK--A 385

Query: 652 YASAVGSLMYAMLCTRPDICYVVGIVSRYQSNPGLDHWTTIKIILKYLRKTRDYMLMYGA 711
           Y   +G LMY  + TR DI + V  +S++   P L H   +  IL Y++ T    L Y +
Sbjct: 386 YRRLIGRLMYLQI-TRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSS 445

Query: 712 K-DLILTGYTDSDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSIMEAEYVAACE 771
           + ++ L  ++D+ FQ+ KD+R+ST+G    L    + W+S KQ  ++ S  EAEY A   
Sbjct: 446 QAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSF 500

[Close]

BLAST of Cmc09g0248381 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 1.3e-18
Identity = 77/233 (33.05%), Postives = 114/233 (48.93%), Query Frame = 0


Query: 541 FLVLYVDDILLIGNDVEYLTDVKAWLAAQFQMKDLGEAQYVLGIQIIRDRKNKTLALSQA 600
           +L+LYVDDILL G+    L  +   L++ F MKDLG   Y LGIQI        L LSQ 
Sbjct: 2   YLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI--KTHPSGLFLSQT 61

Query: 601 TYIDKMLVRYLMQNSK--KGLLPFRHGVHLSKEQCPKTPQEVEDMRRIPYASAVGSLMYA 660
            Y +++L    M + K     LP +    +S  + P    +  D R     S VG+L Y 
Sbjct: 62  KYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYP----DPSDFR-----SIVGALQYL 121

Query: 661 MLCTRPDICYVVGIVSRYQSNPGLDHWTTIKIILKYLRKTRDY-MLMYGAKDLILTGYTD 720
            L TRPDI Y V IV +    P L  +  +K +L+Y++ T  + + ++    L +  + D
Sbjct: 122 TL-TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCD 181

Query: 721 SDFQTDKDSRKSTSGSVFTLNGGAVVWRSIKQGCIADSIMEAEYVAACEAAKE 771
           SD+     +R+ST+G    L    + W + +Q  ++ S  E EY A    A E
Sbjct: 182 SDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAE 222

[Close]

BLAST of Cmc09g0248381 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 1.6e-05
Identity = 25/69 (36.23%), Postives = 39/69 (56.52%), Query Frame = 0


Query: 182 NRTLLDMVCSMMSYAQLSSSFWGYAVEAAVHILNNVLSKSVS-ETPFELWRGRKPSLSHF 241
           NRT+++ V SM+    L  +F   A   AVHI+N   S +++   P E+W    P+ S+ 
Sbjct: 2   NRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYL 61

Query: 242 RIWGCPAYV 250
           R +GC AY+
Sbjct: 62  RRFGCVAYI 70

[Close]

BLAST of Cmc09g0248381 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 47.4 bits (111), Expect = 6.2e-05
Identity = 23/63 (36.51%), Postives = 34/63 (53.97%), Query Frame = 0


Query: 18  NNTYLWHLRLGHINLDWIRRLVKNGLLNKLEDDSLPPCESCLEGKMTKRPFTGKGYRAKE 77
           + T LWH RL H++   +  LVK G L+  +  SL  CE C+ GK  +  F+   +  K 
Sbjct: 67  DETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKN 126

Query: 78  PLE 81
           PL+
Sbjct: 127 PLD 129

The following BLAST results are available for this feature:

BLAST of Cmc09g0248381 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0025945.1	0.0e+00	90.59	gag/pol protein [Cucumis melo var. makuwa] >KAA0026303.1 gag/pol protein [Cucumi...	[more]
KAA0035907.1	0.0e+00	89.36	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0059226.1	0.0e+00	90.17	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0062886.1	0.0e+00	93.53	gag/pol protein [Cucumis melo var. makuwa]	[more]
KAA0033121.1	0.0e+00	87.67	gag/pol protein [Cucumis melo var. makuwa] >TYK17112.1 gag/pol protein [Cucumis ...	[more]

BLAST of Cmc09g0248381 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.8e-157	38.31	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.0e-100	29.82	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	9.4e-83	27.07	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	1.5e-80	26.97	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	5.6e-35	33.44	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc09g0248381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZD0	0.0e+00	90.59	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1163G000...	[more]
A0A5A7T2V9	0.0e+00	89.36	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G00760...	[more]
A0A5A7UYE8	0.0e+00	90.17	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold430G0015...	[more]
A0A5A7V8W0	0.0e+00	93.53	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4427G001...	[more]
A0A5D3CZY3	0.0e+00	87.67	Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1032G004...	[more]

BLAST of Cmc09g0248381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.1e-53	34.89	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.3e-18	33.05	DNA/RNA polymerases superfamily protein	[more]
ATMG00710.1	1.6e-05	36.23	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
ATMG00300.1	6.2e-05	36.51	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 78..242 e-value: 2.5E-32 score: 113.8
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 16..63 e-value: 1.1E-11 score: 44.4
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 400..620 e-value: 5.0E-60 score: 203.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 315..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 329..351
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 19..707
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 713..772 e-value: 4.60718E-26 score: 102.161
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 63..234 score: 20.058304
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 395..749
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 83..231

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0248381.1	Cmc09g0248381.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding