Cmc09g0246491 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0246491
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Translocase subunit seca
Location	CMiso1.1chr09: 10439351 .. 10440939 (-)
RNA-Seq Expression	Cmc09g0246491
Synteny	Cmc09g0246491

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAATTTCCTTTAAAAGCAAAAAGAATAAAGATTGAAATAGAGAGGAAATCTCCCCATCGCTCTCTCTATGTCCCTCTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCCATTCTTTCTCTCTCTCCATTTTCATTTTATTTTCCAATTAACAAATCTGATTCCCGTCTCTTTGCCCCATTCTCTCTTCTTTATGTTCTTGTTATATAACTCATAACCCACGCTCCTCCTCTCCTTTTTCTCCTAACCACAATCCTCTCTCTTCTTCTTTAGGTTTAATCTCTATATCACTTTTGTTTCTAACTTCTATGCTCTTTCACTTCAAACTTTTAATTTTTAGATCTTTGTATGTCCAGGATTGTGTTTTCAATTTTTTTTTTGGGGAAAGATGTTTCTGCTAGATCTATTGTGATTTGGGTTTTTTTCCTTGTTAGTTTAAAAGGTTTGTTTTATCTTGTCTGTATAGGCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGCGAAGCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCCAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTATGGATCTCCTCTTCTTAAAGGTACTTAGTTTTCGCTTAGAGATGAATTCTATCCAATAAAAGAAAAGGATTGATGAATATTTTGTTTTTGTGTGTGTTTCTTTAGGGTGGTTGTGGTTTGGAGAAATTTAACAGTAGTAATACACAATTAGCCTCGTCGACGCCGTATTTTTGTGGATCGCCGCCGAGCAGAGTAGCTAACCCATTGATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGACGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTAGAAAAGGTGGATGTGTCCGGGTTAACTTTGGTAACAACCCGGCGGTGAGGATCGAAGGGTTTGACTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAGAAACCCTATCCAAGCCTAGCCGAGCCGATTGAGCAATGATGATTAAGAAAACGAACACATGGATTTTAAATTTTTTTCCAACATTCAAATTTAAGATATTAAAGTACAATTTTGAAAGAAAAAAGAAACCTTTTTGTCCAAAACACCATTGTTGTAAATAATTTGGAAAGGAAATCCAAGTAAATATATGTCAAAAGAAAAAAGGGGCCTTGTTAGGTTTCTTTCTCTATTTAGTTGAGTTGAGGTTTGAGAGTCCTTATTTGACCATATTGAAAAATAAGAGTCAGAGGGAGAGGGAGATTATGCTTCTCTATTTTGTAGCATATGTATGTTCTTTTATTTCTCTTTAGGAGTGTCCAAGATTGTTTCTTTGTAGCTTAAGGGAAAACTTTTTGTTGCAGCTTGAGAATGAGAAAACATGTACAAATTGAAGCTGCATAAATTCAATATTAATCATGTAAATCTTTAATGTTATAATATATATATATATATACACATATATGTATGTACTTTTCCTTCTCT

mRNA sequence

TTAATTTCCTTTAAAAGCAAAAAGAATAAAGATTGAAATAGAGAGGAAATCTCCCCATCGCTCTCTCTATGTCCCTCTAGCTGTGCTTTGCTGTTGCCCAATAGATATTACCCTTTTTTCCCATTCTTTCTCTCTCTCCATTTTCATTTTATTTTCCAATTAACAAATCTGATTCCCGTCTCTTTGCCCCATTCTCTCTTCTTTATGTTCTTGTTATATAACTCATAACCCACGCTCCTCCTCTCCTTTTTCTCCTAACCACAATCCTCTCTCTTCTTCTTTAGGCAAACAGAAAACTAAAATTAGAAGAAGATGAATTGGGTTTGTGAAGAGATGCGAAGCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCCAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTATGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAAATTTAACAGTAGTAATACACAATTAGCCTCGTCGACGCCGTATTTTTGTGGATCGCCGCCGAGCAGAGTAGCTAACCCATTGATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGACGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTAGAAAAGGTGGATGTGTCCGGGTTAACTTTGGTAACAACCCGGCGGTGAGGATCGAAGGGTTTGACTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAGAAACCCTATCCAAGCCTAGCCGAGCCGATTGAGCAATGATGATTAAGAAAACGAACACATGGATTTTAAATTTTTTTCCAACATTCAAATTTAAGATATTAAAGTACAATTTTGAAAGAAAAAAGAAACCTTTTTGTCCAAAACACCATTGTTGTAAATAATTTGGAAAGGAAATCCAAGTAAATATATGTCAAAAGAAAAAAGGGGCCTTGTTAGGTTTCTTTCTCTATTTAGTTGAGTTGAGGTTTGAGAGTCCTTATTTGACCATATTGAAAAATAAGAGTCAGAGGGAGAGGGAGATTATGCTTCTCTATTTTGTAGCATATGTATGTTCTTTTATTTCTCTTTAGGAGTGTCCAAGATTGTTTCTTTGTAGCTTAAGGGAAAACTTTTTGTTGCAGCTTGAGAATGAGAAAACATGTACAAATTGAAGCTGCATAAATTCAATATTAATCATGTAAATCTTTAATGTTATAATATATATATATATATACACATATATGTATGTACTTTTCCTTCTCT

Coding sequence (CDS)

ATGAATTGGGTTTGTGAAGAGATGCGAAGCGCCGCCACCGACCGCCGTGAGCGAATTGTTTGTCCCAAACCCCGCCGTCTCGGTCTCATCAATGATACTTGCAACGATAACCCATTTAGACACCGGTTTGATTCAGATGCTATGGATCTCCTCTTCTTAAAGGGTGGTTGTGGTTTGGAGAAATTTAACAGTAGTAATACACAATTAGCCTCGTCGACGCCGTATTTTTGTGGATCGCCGCCGAGCAGAGTAGCTAACCCATTGATCCAAGACGCTCGATTTGGGGATGAGAAGCCAAAGCTGCTCCCCCTCTTCTCGACGGCGGCTTCTCCTCCTTTGTCTCCACCGCCGTCGGCCGGTAGAAAAGGTGGATGTGTCCGGGTTAACTTTGGTAACAACCCGGCGGTGAGGATCGAAGGGTTTGACTGCCGCCTCGACAGGGAGAGGCGAAACCGCAGCATCCCTGCCCTGGCTTAG

Protein sequence

MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA

Homology

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BLAST of Cmc09g0246491 vs. NCBI nr
Match: XP_008465783.1 (PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo])

HSP 1 Score: 334.3 bits (856), Expect = 5.5e-88
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE
Sbjct: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60

Query: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
           KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG
Sbjct: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

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BLAST of Cmc09g0246491 vs. NCBI nr
Match: XP_004140334.1 (uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical protein Csa_007795 [Cucumis sativus])

HSP 1 Score: 319.7 bits (818), Expect = 1.4e-83
Identity = 150/158 (94.94%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE
Sbjct: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60

Query: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
            FNSSN QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPPLSPPPSAG
Sbjct: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of Cmc09g0246491 vs. NCBI nr
Match: KAA0047427.1 (uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK04136.1 uncharacterized protein E5676_scaffold2119G00810 [Cucumis melo var. makuwa])

HSP 1 Score: 316.6 bits (810), Expect = 1.2e-82
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 8   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 67
           MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 60

Query: 68  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 127
           QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR
Sbjct: 61  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 120

Query: 128 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           VNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

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BLAST of Cmc09g0246491 vs. NCBI nr
Match: XP_038906747.1 (uncharacterized protein LOC120092671 [Benincasa hispida])

HSP 1 Score: 301.6 bits (771), Expect = 4.0e-78
Identity = 142/158 (89.87%), Postives = 149/158 (94.30%), Query Frame = 0


Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEM +AA DRRER+VCPKPRRLGL+ND  NDNPFRHRFDSDA+DLLF KGGCGLE
Sbjct: 1   MNWVCEEMMTAA-DRRERLVCPKPRRLGLMNDAGNDNPFRHRFDSDALDLLFFKGGCGLE 60

Query: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
            FNSS+TQLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPP SPPPSAG
Sbjct: 61  NFNSSSTQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPSSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVR+NFGNNPAVRIEGFDCRLDRERRNRS+PALA
Sbjct: 121 RKGGCVRINFGNNPAVRIEGFDCRLDRERRNRSVPALA 157

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BLAST of Cmc09g0246491 vs. NCBI nr
Match: KAG7032498.1 (hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 3.3e-64
Identity = 127/158 (80.38%), Postives = 135/158 (85.44%), Query Frame = 0


Query: 6   EEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEK 65
           E MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLFLKGGC LE 
Sbjct: 16  EMMRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFLKGGCDLEN 75

Query: 66  FNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPPSAG 125
           FNSS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPPS  
Sbjct: 76  FNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTD 135

Query: 126 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

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BLAST of Cmc09g0246491 vs. ExPASy TrEMBL
Match: A0A1S3CR46 (uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=4 SV=1)

HSP 1 Score: 334.3 bits (856), Expect = 2.7e-88
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE
Sbjct: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60

Query: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
           KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG
Sbjct: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of Cmc09g0246491 vs. ExPASy TrEMBL
Match: A0A0A0KRF1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1)

HSP 1 Score: 319.7 bits (818), Expect = 6.8e-84
Identity = 150/158 (94.94%), Postives = 153/158 (96.84%), Query Frame = 0


Query: 1   MNWVCEEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLE 60
           MNWVCEEM++AATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDA+DLLFLKGGCGLE
Sbjct: 1   MNWVCEEMQTAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDALDLLFLKGGCGLE 60

Query: 61  KFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAG 120
            FNSSN QLASS PYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS AASPPLSPPPSAG
Sbjct: 61  NFNSSNAQLASSPPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSPAASPPLSPPPSAG 120

Query: 121 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           RKGGCVRVNFG NPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 RKGGCVRVNFGKNPAVRIEGFDCRLDRERRNRSIPALA 158

[Close]

BLAST of Cmc09g0246491 vs. ExPASy TrEMBL
Match: A0A5D3C147 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00810 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 5.8e-83
Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0


Query: 8   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 67
           MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT
Sbjct: 1   MRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGLEKFNSSNT 60

Query: 68  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 127
           QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR
Sbjct: 61  QLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSPPPSAGRKGGCVR 120

Query: 128 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           VNFGNNPAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 121 VNFGNNPAVRIEGFDCRLDRERRNRSIPALA 151

[Close]

BLAST of Cmc09g0246491 vs. ExPASy TrEMBL
Match: A0A6J1E6Z2 (uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC111431174 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.3e-63
Identity = 128/161 (79.50%), Postives = 136/161 (84.47%), Query Frame = 0


Query: 4   VCEEM-RSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCG 63
           V EEM R+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC 
Sbjct: 13  VREEMTRAADTDRRERLVCPKPRRLGLINTTVNDNPFRHRFDSVAANDALDLLFFKGGCD 72

Query: 64  LEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPP 123
           LE FNSS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPP
Sbjct: 73  LENFNSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPP 132

Query: 124 SAGRKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           S  R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 133 STDRNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Cmc09g0246491 vs. ExPASy TrEMBL
Match: A0A6J1I2X1 (uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 2.3e-63
Identity = 125/158 (79.11%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 6   EEMRSAATDRRERIVCPKPRRLGLINDTCNDNPFRHRFDS----DAMDLLFLKGGCGLEK 65
           E MR+A TDRRER+VCPKPRRLGLIN T NDNPFRHRFDS    DA+DLLF KGGC LE 
Sbjct: 16  EMMRAADTDRRERLVCPKPRRLGLINATANDNPFRHRFDSIAANDALDLLFFKGGCDLEN 75

Query: 66  FNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFS-TAASPPLSPPPSAG 125
           F SS+TQLASS PY CG+PPSRVANPLIQDARFG+EKPK+LP+FS   A PP SPPPS  
Sbjct: 76  FKSSSTQLASSPPYLCGTPPSRVANPLIQDARFGNEKPKMLPVFSPEVAPPPYSPPPSTD 135

Query: 126 RKGGCVRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           R GG VR NFGN PAVRIEGFDCRLDRERRNRSIPALA
Sbjct: 136 RNGGWVRPNFGNIPAVRIEGFDCRLDRERRNRSIPALA 173

[Close]

BLAST of Cmc09g0246491 vs. TAIR 10
Match: AT1G68490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 130.2 bits (326), Expect = 1.5e-30
Identity = 79/171 (46.20%), Postives = 104/171 (60.82%), Query Frame = 0


Query: 7   EMRSAATDRRER----IVCPKPRRLGLINDTCNDNP-----FRHRF-------DSDAMDL 66
           ++RS++    ER    +VCPKPRR+GL N+  + +      F H+        ++D +D+
Sbjct: 16  DLRSSSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRSLRCYFSHQLELCESKAETDILDI 75

Query: 67  LFLKGGCGLEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLF--STA 126
           +  K G G E+ N     + S +P+ CGSPPSRVANPL QDARF DE   +  +      
Sbjct: 76  ILTKDGYGAEQVNKQ--VIDSPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQLG 135

Query: 127 ASPPLSPPPSAGRKGGC-VRVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
             P  SP  S+GRKGGC VR NFGN+P VR+EGFDC LDR+ RN SIPALA
Sbjct: 136 LPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDC-LDRDSRNCSIPALA 183

[Close]

BLAST of Cmc09g0246491 vs. TAIR 10
Match: AT5G16110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 120.2 bits (300), Expect = 1.5e-27
Identity = 76/161 (47.20%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 14  DRRERIVCPKPRRLGLINDTCNDNPFRHRFDSDAMDLLFLKGGCGL-------EKFNSSN 73
           DR++ +VCPKPRR+GL+ +     P R      A DL   K G  L       E   +  
Sbjct: 87  DRKDLVVCPKPRRVGLLANNV-IRPLRLHMSQAAADLCDSKAGAELLEIIRRKEDNGTIG 146

Query: 74  TQLASSTPYFCGSPPSRVANPLIQDARFGDEK--------PKLLPLFSTAASPPLSPPPS 133
             L+SS PYF GSPPSR ANPL QDARF DEK        P L P +S    P  S   S
Sbjct: 147 QLLSSSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQP-YSATGFPSPSSSSS 206

Query: 134 AGRKGGCVRVNFG-NNPAVRIEGFDCRLDRERRNRSIPALA 159
           +    GCVR+ FG N+PAVR+EGFDC L+R+R+N SIPA+A
Sbjct: 207 SSSSRGCVRMKFGLNSPAVRVEGFDC-LNRDRQNSSIPAMA 244

[Close]

BLAST of Cmc09g0246491 vs. TAIR 10
Match: AT1G13390.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 6.0e-24
Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 6   EEMR--SAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDAMDLLFL 65
           EEMR  +A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ +D +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPL 125
           KGG G  + + + T +     +F GSPPSRV+NPL +D+ F +E   LL + S + S P 
Sbjct: 73  KGGGGGGEQDQTRTVMTPPL-FFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTPR 132

Query: 126 S---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           +    PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 ATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of Cmc09g0246491 vs. TAIR 10
Match: AT1G13390.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G68490.1); Has 114 Blast hits to 114 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 114; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 6.0e-24
Identity = 69/170 (40.59%), Postives = 98/170 (57.65%), Query Frame = 0


Query: 6   EEMR--SAATDRRERIVCPKPRRLGLINDTCNDN---PFRHRFD-------SDAMDLLFL 65
           EEMR  +A +DRR+ ++CPKPRR+G +N   + +      H+ +       S+ +D +  
Sbjct: 13  EEMRRNAAVSDRRDAVICPKPRRVGALNHHSSRSLRWQLNHQMELCESNSGSEILDFILT 72

Query: 66  KGGCGLEKFNSSNTQLASSTPYFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPL 125
           KGG G  + + + T +     +F GSPPSRV+NPL +D+ F +E   LL + S + S P 
Sbjct: 73  KGGGGGGEQDQTRTVMTPPL-FFTGSPPSRVSNPLTKDSLFREE---LLMVASPSPSTPR 132

Query: 126 S---PPPSAGRKGGCV--RVNFGNNPAVRIEGFDCRLDRERRNRSIPALA 159
           +    PPS+ R G CV    +FGNNP VR+ GFDC  DR   NRSI  LA
Sbjct: 133 ATKPQPPSSPRNGSCVMAATSFGNNPVVRVVGFDC--DRRSSNRSISTLA 176

[Close]

BLAST of Cmc09g0246491 vs. TAIR 10
Match: AT3G02555.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16110.1); Has 130 Blast hits to 130 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 130; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 107.8 bits (268), Expect = 7.9e-24
Identity = 73/147 (49.66%), Postives = 86/147 (58.50%), Query Frame = 0


Query: 17  ERIVCPKPRRLGLINDTCNDNPFRHRFD-SDAMDLLFLKGGCG-LEKFNSSNTQLASSTP 76
           + +VCPKPRR   +       PFR  F  S A D+   K G   L+ F    +  + S P
Sbjct: 29  DSVVCPKPRRANNV-----IRPFRLHFSLSGADDVCDSKAGEDLLDIFRRKESVSSRSPP 88

Query: 77  YFCGSPPSRVANPLIQDARFGDEKPKLLPLFSTAASPPLSP-PPSAGR-KGGCVRVNFGN 136
           +F GSPPSR ANPL QDARFGDEK           SP LSP  PSA R K GC R+ FG 
Sbjct: 89  FFLGSPPSRAANPLAQDARFGDEK-------LNTVSPSLSPLLPSASRVKSGCGRMKFGV 148

Query: 137 NPA-VRIEGFDCRLDRERRNRSIPALA 159
            PA VR+EGFDC L+R+R N SIPA+A
Sbjct: 149 KPATVRVEGFDC-LNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:

BLAST of Cmc09g0246491 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465783.1	5.5e-88	100.00	PREDICTED: uncharacterized protein LOC103503385 [Cucumis melo] >XP_016903435.1 P...	[more]
XP_004140334.1	1.4e-83	94.94	uncharacterized protein LOC101221533 [Cucumis sativus] >KGN50957.1 hypothetical ...	[more]
KAA0047427.1	1.2e-82	100.00	uncharacterized protein E6C27_scaffold498G00180 [Cucumis melo var. makuwa] >TYK0...	[more]
XP_038906747.1	4.0e-78	89.87	uncharacterized protein LOC120092671 [Benincasa hispida]	[more]
KAG7032498.1	3.3e-64	80.38	hypothetical protein SDJN02_06547 [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of Cmc09g0246491 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc09g0246491 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CR46	2.7e-88	100.00	uncharacterized protein LOC103503385 OS=Cucumis melo OX=3656 GN=LOC103503385 PE=...	[more]
A0A0A0KRF1	6.8e-84	94.94	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G373190 PE=4 SV=1	[more]
A0A5D3C147	5.8e-83	100.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1E6Z2	1.3e-63	79.50	uncharacterized protein LOC111431174 OS=Cucurbita moschata OX=3662 GN=LOC1114311...	[more]
A0A6J1I2X1	2.3e-63	79.11	uncharacterized protein LOC111470460 OS=Cucurbita maxima OX=3661 GN=LOC111470460...	[more]

BLAST of Cmc09g0246491 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68490.1	1.5e-30	46.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G16110.1	1.5e-27	47.20	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13390.1	6.0e-24	40.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13390.2	6.0e-24	40.59	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G02555.1	7.9e-24	49.66	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384:SF18	BNAA07G24630D PROTEIN	coord: 8..158
None	No IPR available	PANTHER	PTHR33384	EXPRESSED PROTEIN	coord: 8..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0246491.1	Cmc09g0246491.1	mRNA