Cmc09g0246481 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTAACATTCCCTATGCTTATGCTGTTGGGAGCCTGATGTATGCTATGTCATGTATTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCAATCCTGGATGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGATTACATGCTCGTGTATGGTTCTAAGGATATGATCCTTATTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATTAGGATCAGTTTTCACTCTTAATGGAGGAGCAGTAGTATGA ATGAGTAACATTCCCTATGCTTATGCTGTTGGGAGCCTGATGTATGCTATGTCATGTATTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCAATCCTGGATGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGATTACATGCTCGTGTATGGTTCTAAGGATATGATCCTTATTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATTAGGATCAGTTTTCACTCTTAATGGAGGAGCAGTAGTATGA ATGAGTAACATTCCCTATGCTTATGCTGTTGGGAGCCTGATGTATGCTATGTCATGTATTAGACCTGACATTTGCTATTCAGTGGGGATAGTTAGTAGATATCAGTCCAATCCTGGATGTGATCATTGGACAACCGTTAAGAATATTCTAAAATATCTTAGAAGAACAAAAGATTACATGCTCGTGTATGGTTCTAAGGATATGATCCTTATTGGATACACTGACTCCGATTTTCAAACTGATAAAGATGCTAGAAAGTCTACATTAGGATCAGTTTTCACTCTTAATGGAGGAGCAGTAGTATGA MSNIPYAYAVGSLMYAMSCIRPDICYSVGIVSRYQSNPGCDHWTTVKNILKYLRRTKDYMLVYGSKDMILIGYTDSDFQTDKDARKSTLGSVFTLNGGAVV Homology
BLAST of Cmc09g0246481 vs. NCBI nr
Match: KAA0047426.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK04135.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 210.7 bits (535), Expect = 5.9e-51 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cmc09g0246481 vs. NCBI nr
Match: TYK06386.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of Cmc09g0246481 vs. NCBI nr
Match: KAA0050132.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45 Identity = 93/101 (92.08%), Postives = 95/101 (94.06%), Query Frame = 0
BLAST of Cmc09g0246481 vs. NCBI nr
Match: KAA0062116.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 189.5 bits (480), Expect = 1.4e-44 Identity = 93/101 (92.08%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Cmc09g0246481 vs. NCBI nr
Match: TYK29682.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 187.6 bits (475), Expect = 5.4e-44 Identity = 91/101 (90.10%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 8.9e-26 Identity = 56/100 (56.00%), Postives = 71/100 (71.00%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy Swiss-Prot
Match: P0CV72 (Secreted RxLR effector protein 161 OS=Plasmopara viticola OX=143451 GN=RXLR161 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.0e-18 Identity = 43/101 (42.57%), Postives = 67/101 (66.34%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 4.9e-08 Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-06 Identity = 33/97 (34.02%), Postives = 46/97 (47.42%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 7.9e-06 Identity = 32/91 (35.16%), Postives = 50/91 (54.95%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy TrEMBL
Match: A0A5D3BY87 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00800 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 2.9e-51 Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy TrEMBL
Match: A0A5D3C7T2 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00810 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 7.3e-47 Identity = 95/101 (94.06%), Postives = 96/101 (95.05%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy TrEMBL
Match: A0A5A7U2R8 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001560 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.2e-46 Identity = 93/101 (92.08%), Postives = 95/101 (94.06%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy TrEMBL
Match: A0A5A7V6Q6 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004720 PE=4 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.8e-45 Identity = 93/101 (92.08%), Postives = 94/101 (93.07%), Query Frame = 0
BLAST of Cmc09g0246481 vs. ExPASy TrEMBL
Match: A0A5D3E173 (Gag/pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold64G00320 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 2.6e-44 Identity = 91/101 (90.10%), Postives = 93/101 (92.08%), Query Frame = 0
BLAST of Cmc09g0246481 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 49.7 bits (117), Expect = 1.6e-06 Identity = 31/86 (36.05%), Postives = 47/86 (54.65%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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