Cmc09g0246011 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGAGCAGAATGGTTGGGTAAAAATTAAAATAAAAGTTGGGTGACAAATGTAACAACTAGAAGAATGGAAGAGGCATGGACGAGTTGGCATTGTCCCTACACAACCCAAAAGCCCTAGTACATGGCGGCAATTTCTACTTCACTTCTTTCTTCTTTCCCTTCCATTCGGACCGTTGTGCACAGTAAACTCATCCTGCTCTAACCCAGTGATCCATTGAGAACTTGAGAAGAGGACGTCTTATTTCCTCACCCACATCCTTCTCTCTACCATAATGCTTCCATATAAACATGGCGGCCTCGAAGCCAGTTTTCCCATGACGAATCACACACGCTGTTGATTTTCGAACCACATTCCAGTGAATGGGCTGGAGAAGGGCTGCTTCAGTTTTTCTCAGCCGCATATCGTTAGCTTCTAAATCTCCCATCCCAATTCCTTTCGCCAATTCAAGACCTTCCTATTCCTTTCATTCTCCAAACCCCGTGTTTCGTTTTCGATGTTTGAGGTCTTTTTCTGCTGTTGCATCTCCGATTTCTTTTGTTGCTAATCAATTTGAATCCGAGGTTGATCATTCCTACGATTTCGAGCCGGAAGATGATGACGAAATTGGGAAAATTCCCATCAAAGCTTACTTCCTTTGCACCAGGTTTGTCACTGTATTGACCTTTGGATTGATGTATTTCTCGTAGATTATCTTGTTTAATCTACTTCATTTGTCTCCACTTGTATATTAGACTATTAGGTGTTGGAACTTGTTAAAATTAGACGCCATTTCTTCATTCATAGACAAGTTGGTATTGAAGTAAACCGAAGCTGATTTTTTTTTTTTTGAATTTTTTTTTTGGCTGCCTAGTTGATGCATGCTTCTCTATTTCTTTCTTTTTTCCTGGTCATTTGTGGGTTTCCTTTCTCAGATTCGTGATTTTGGCAGTATAAATTTGAAGAATATGCAATCTGAGAATCTAAGCAATGTTGTCCCTCCTACCTCCCGCGCGTCAAATTATATCGCTCTGAGATACACTGATTTCCCTCGAGAAACCTCCGTAAGCAGTTGAAACATATGTATATTCTTTATGCTTAAATATCATGCTTTGTTCAAGTTACTCTTTTTGTTATTATTACTTTTTTGATACAAAACGGATGATTATTCATTCAAAAAAAGGGGAGCCGAACAACCTAACGGGCCAAGGGGCAAGAAGCCTTCAAATGTAAATTAATGTGGAAGGTGGAGCAAATACAAAAAAACTTGTGTTGGCAACCCCACCTAGAAGTCGTGAACTGGAAAAAGTTACAAGTAATAAAAAGAATTGTACTTATCTAAGCTAATTCTAGCATTTATTTCCTTACAAGCTTCCAAATAAGCTACAAAAAGCCTTCGTTGTATTCGACCACAACACTCCTATCTCTTCCAATTTCCAATCGCTCAAAGAGTTCACCTTCCACCTAGAGCCAAAGGTTAACATCACTGCAAACCAAATAAGTTACCAGAATAGTTCCACACTCTCTAGCTGAAGCTACAACGAAGCAAAAGGGAGAGTGTTTGCTCACTCCCTTTATTGAGGACACACAAATTGGGGGAGATGTTTTGGTGGGGATAATGCATATCTTCGTTGCACCTTGTTATGAGTATTAATACTGCAGAGAACACACATACTACAAGGCTAATTCAGAGGCTTGTCAGATTGGATTATAAGATTTGTAGTTTGGCCAACTCAGGTGGTGGATTCTTTATTCACATGCCTTTGGGGTTTTCGAAGAAGGGTGGTCACTCTTTCTTAGGAATGCTAAAGAGCTTTAAGGAGAAAAGAGTCTTTTGTTTGTCAAACTAGGCAGACACTGATTTTTAAGCCTCAATATCTAAGCAAGGCTATTCCATCGTCTTTCATTCTGAAAGACCAGAGATAGTGCAGGTAAAGAGCGATTGTCGTGATTGTCATTCCTCTATTCTTCATACAAGAAAACAGAGCATGACTTATGAAGGAATAAAAAGATAGGCACACTCCTCTATTTTAGGTATGGGAAAACAGAGCAAGAATTCATTTTGGGTTAAAAAAGAATGATGAAGTTTTTGTGGAAAATTTCAATAATCTCTGGATTATTTCAAGGCTGTTTACGTTTAGAGACTCCGACTAGAAGAAGATAACAAAATTGTTGGAAGATTTTTCAAATTCAAGTATTTATCAATCCTCCGTTTGCAGGCTATACACTGATTAAAATTGATCAGGGTGATTTTTGATTGAGTCCCTATGTAAATGATATGTTTTTGGTCCCTTTCACTTGTTCGAAAAATGGGACAAATTTCTTCACAGTTGCCCTTGCAATACCATTGGGATAGTTTGGTACATTCAAATTAATCCTAGTTAATCCTTGATTAATTACATCTTAGTTACCCTAACTTACAAGAAGCTTACATTTTAGTTACCCCTTTAGGTTTTAGTTTCCCTTTAGTTATCCTTTTAAGGATTCTTTTAATTTTCTATAAATAGTGAGTCCCTTCTTGTATTAGACAACTTTTGATAATAATAAAGATTTTGATTTGGTTCTTGGTGAAAGTTTCTTTTATCTCTTGAGGCTACATACATCACATAAGGAGTGAAAATAATTGAACACAAGGCAAACTAATAAGTAATAACACAAGTCAAAGCAACCAAAGTCTTGGAAATGATGGTAAAAAGATCAATGTACAAGAATCATCATTAACTGGCCTATGTTAGACCACCAGTCCTTCAGACGTATAAAAGGAGGGGCAAGAAAGGAAATCCACATAATAATACTATGAGAGAGATCATTGGAGAGGAAAGAAATACCTGAGGGTCCCACTAGATTGTTGGTTTAAATAGGGAATGTGTTGGGATTGATCATTGAGCTTTTATTTTGGTAAAAAGCTGCTGTAAGCTTCTCGGGGAGAGGATTCTAGCCTTCTCGAAGGAGCTGGTTTGTTGCTTTTTTGTTATGTATTTTGCTTTCCATTTATGTTCATCTTTAGACTCTATTTTGGCTTGTAGAAACCTGGTTGATATTGCAATATGTTTAAGTAGAGTGCTGTCTCTGTTTTACTATTGTTGTGATCTTTCTGAGTTTCAGGTTGAAGAGTCTTAAC GGGAGCAGAATGGTTGGGTAAAAATTAAAATAAAAGTTGGGTGACAAATGTAACAACTAGAAGAATGGAAGAGGCATGGACGAGTTGGCATTGTCCCTACACAACCCAAAAGCCCTAGTACATGGCGGCAATTTCTACTTCACTTCTTTCTTCTTTCCCTTCCATTCGGACCGTTGTGCACAGTAAACTCATCCTGCTCTAACCCAGTGATCCATTGAGAACTTGAGAAGAGGACGTCTTATTTCCTCACCCACATCCTTCTCTCTACCATAATGCTTCCATATAAACATGGCGGCCTCGAAGCCAGTTTTCCCATGACGAATCACACACGCTGTTGATTTTCGAACCACATTCCAGTGAATGGGCTGGAGAAGGGCTGCTTCAGTTTTTCTCAGCCGCATATCGTTAGCTTCTAAATCTCCCATCCCAATTCCTTTCGCCAATTCAAGACCTTCCTATTCCTTTCATTCTCCAAACCCCGTGTTTCGTTTTCGATGTTTGAGGTCTTTTTCTGCTGTTGCATCTCCGATTTCTTTTGTTGCTAATCAATTTGAATCCGAGGTTGATCATTCCTACGATTTCGAGCCGGAAGATGATGACGAAATTGGGAAAATTCCCATCAAAGCTTACTTCCTTTGCACCAGTATAAATTTGAAGAATATGCAATCTGAGAATCTAAGCAATGTTGTCCCTCCTACCTCCCGCGCGTCAAATTATATCGCTCTGAGATACACTGATTTCCCTCGAGAAACCTCCGTTGAAGAGTCTTAAC ATGGGCTGGAGAAGGGCTGCTTCAGTTTTTCTCAGCCGCATATCGTTAGCTTCTAAATCTCCCATCCCAATTCCTTTCGCCAATTCAAGACCTTCCTATTCCTTTCATTCTCCAAACCCCGTGTTTCGTTTTCGATGTTTGAGGTCTTTTTCTGCTGTTGCATCTCCGATTTCTTTTGTTGCTAATCAATTTGAATCCGAGGTTGATCATTCCTACGATTTCGAGCCGGAAGATGATGACGAAATTGGGAAAATTCCCATCAAAGCTTACTTCCTTTGCACCAGTATAAATTTGAAGAATATGCAATCTGAGAATCTAAGCAATGTTGTCCCTCCTACCTCCCGCGCGTCAAATTATATCGCTCTGAGATACACTGATTTCCCTCGAGAAACCTCCGTTGAAGAGTCTTAA MGWRRAASVFLSRISLASKSPIPIPFANSRPSYSFHSPNPVFRFRCLRSFSAVASPISFVANQFESEVDHSYDFEPEDDDEIGKIPIKAYFLCTSINLKNMQSENLSNVVPPTSRASNYIALRYTDFPRETSVEES Homology
BLAST of Cmc09g0246011 vs. NCBI nr
Match: TYK14210.1 (uncharacterized protein E5676_scaffold5G00350 [Cucumis melo var. makuwa]) HSP 1 Score: 268.1 bits (684), Expect = 4.2e-68 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Cmc09g0246011 vs. NCBI nr
Match: XP_008465760.1 (PREDICTED: uncharacterized protein LOC103503365 isoform X1 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Cmc09g0246011 vs. NCBI nr
Match: XP_016903477.1 (PREDICTED: uncharacterized protein LOC103503365 isoform X2 [Cucumis melo]) HSP 1 Score: 266.5 bits (680), Expect = 1.2e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Cmc09g0246011 vs. NCBI nr
Match: XP_031741615.1 (uncharacterized protein LOC101217654 isoform X1 [Cucumis sativus] >KAE8648384.1 hypothetical protein Csa_008549 [Cucumis sativus]) HSP 1 Score: 249.6 bits (636), Expect = 1.5e-62 Identity = 124/132 (93.94%), Postives = 127/132 (96.21%), Query Frame = 0
BLAST of Cmc09g0246011 vs. NCBI nr
Match: XP_038890045.1 (uncharacterized protein LOC120079752 isoform X1 [Benincasa hispida]) HSP 1 Score: 228.4 bits (581), Expect = 3.7e-56 Identity = 112/132 (84.85%), Postives = 119/132 (90.15%), Query Frame = 0
BLAST of Cmc09g0246011 vs. ExPASy Swiss-Prot
Match: Q9C565 (Protein RETARDED ROOT GROWTH, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RRG PE=1 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 7.6e-20 Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of Cmc09g0246011 vs. ExPASy Swiss-Prot
Match: Q9FNB2 (Protein RETARDED ROOT GROWTH-LIKE OS=Arabidopsis thaliana OX=3702 GN=RRL PE=2 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 3.9e-08 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Cmc09g0246011 vs. ExPASy TrEMBL
Match: A0A5D3CS26 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold5G00350 PE=4 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 2.0e-68 Identity = 133/133 (100.00%), Postives = 133/133 (100.00%), Query Frame = 0
BLAST of Cmc09g0246011 vs. ExPASy TrEMBL
Match: A0A1S3CPM6 (uncharacterized protein LOC103503365 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503365 PE=3 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 5.9e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Cmc09g0246011 vs. ExPASy TrEMBL
Match: A0A1S4E5I0 (uncharacterized protein LOC103503365 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503365 PE=3 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 5.9e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of Cmc09g0246011 vs. ExPASy TrEMBL
Match: A0A6J1GGP5 (uncharacterized protein LOC111454067 OS=Cucurbita moschata OX=3662 GN=LOC111454067 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 7.5e-47 Identity = 98/132 (74.24%), Postives = 108/132 (81.82%), Query Frame = 0
BLAST of Cmc09g0246011 vs. ExPASy TrEMBL
Match: A0A6J1IAZ1 (uncharacterized protein LOC111471847 OS=Cucurbita maxima OX=3661 GN=LOC111471847 PE=3 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 8.3e-46 Identity = 97/132 (73.48%), Postives = 107/132 (81.06%), Query Frame = 0
BLAST of Cmc09g0246011 vs. TAIR 10
Match: AT1G69380.1 (Protein of unknown function (DUF155) ) HSP 1 Score: 98.2 bits (243), Expect = 5.4e-21 Identity = 60/129 (46.51%), Postives = 80/129 (62.02%), Query Frame = 0
BLAST of Cmc09g0246011 vs. TAIR 10
Match: AT5G13610.1 (Protein of unknown function (DUF155) ) HSP 1 Score: 59.3 bits (142), Expect = 2.8e-09 Identity = 40/121 (33.06%), Postives = 63/121 (52.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|