Cmc09g0245561 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0245561
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr09: 9051174 .. 9053051 (+)
RNA-Seq ExpressionCmc09g0245561
SyntenyCmc09g0245561
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGTTACGCAAGTTGTTGAGGATCTAATTTGAAAGCAATCTCAAGAAAAGAGAAAAAAAAAAAAAAAAAGTAGTGTGTGAGGGTGGTAAGTATAGAATGAGAAGCAAATTGAATCACAATCCCATTTATCCCAGGAACTAAACCATGCTAATGTTTAGGCTTGATGAATTTGCTCTTCTTTTGAAATCAACCCCTGTTCTTTGTCAAGTTGGTCTAACTGTTGATATCAAAAGCACACCCAAGACCTTGACTCTAATGCTCACACACCATTCCCCTCGTTTCGTTGCTGCTCTCCAAATGTCCAATGAATTTTTCAACCTCTTTTACTGTGATGAGACTCTCCATTTAAGATTTTCCCTTGAAAAATTTTATGTTCTTATGTACCAAATGGAACTCCAAGCTTATTCTTTAATGCACTTCACTCTTCTCCCAGAATTACACGCTGTCTTCCTTACATTTGAAGATTATAATTCAGGTAAGTTTTCTTTTTCCAAGAATTAGTCGTACCTGAATATGATTCTCATTTCGTTTTTTACTTTTGATTTTTGAAATTTTGTTTTTGTTTGAATTCTTATGACTTCGTAACCATTGGCTTTTCTTAGACTCTCATCTCGTAAGGCTTTCATTTTTAAATTTTATGTCTATTTCATTTCAATTTTTTTACAACGGTTGTAAAAAAAAAAAAAAAAAAAAAAAAGCTTTTGAAAATAACCTAAGTTTAATAATTATTGTAATTTTTGTGTCCAATCTTGTTTTTTTTCTTTTGGTTTCAAAGAATCAAGAAGCTTGGCTTGTTTTTCTTTTAGGAGTGTTGATAATCTTGTTTTCCTATTAAAGAATGAAGGATCATCTCTTGGACTCCATTATGTTTTTGATATAACTATTTTAATTTTTTACCATATATATTTTTCATTTGATAATGCATTGCATTTTAAAAATAAAAACATTTTTAACGTGGTTTTCATTACTTTGATAACAATTTGGATTTACATGTTCTAGTTTATTAAATTTATGCATACTTCATCTTCATTTTTAGATAATGGTGATCGAGAACCCTAAACTTTTGACTTAAATTAATAATAATAACAGGTCAAAAACCAAGAATTACGACGCGCCAATTGGATATGTTACCTTACAAAGTGGACCAACAATTGCGTATTGATTATAAAGCTTTTGTATCAATTGATTCAAAAGACTTCAAACGTGTTGTTTTGGAAATAAGTGCTCATTCTTCAGGTAATTATTTGGTAACTATATATTATTTCATTTTATTTTATTTGTAATTATAAATTAAGTTTGATTGTCTCTCTCCATTGTCACAGTTTATGTTATTTTATCAGATTCAGAAGCCAAGTTTTCTAATGAAAATAAGGAGATTATTTTTACCAAAGAGGTACAAATTTTAGGAACTTTTAATTTATTTGATATAATTATAATAGGGTGCGAAACAAAGGTTTTTAGAAGTAAATTAAATTTGATGTTGTGCAGGAAAGAAAATGTATAATTGGAGGTATTAAAAGGAGAAAGGAATATGAATTTGTAATTACACTTGATCCATTGTTGTTTTTTCTTGATTTGAGCTATCAAGCACAAAGAGTTTGGTTGTTCATGCAAAAGGATCTCTCAAGTATACTCGTTTTCCCCTCTGGACTGTGGACTCAGTTTTGGGTCTATTTCTGTCCCTGACGTATGTGAATTTTACCAACTTCTTCTTCCGTGAAGAAACACATTAATCTTCTTCTTCTTCTTTTTTTCTTTTTCTTTCTTTTTCTTTTTGATCAGTGTAGATTTATATATATATACCTAAAAGTCTTTAGTTGGATTCTAAAAATCTTAGTTGGATTAAAGCATATTATACCATTCAACTCCTTTACTTCC

mRNA sequence

GTGTTACGCAAGTTGTTGAGGATCTAATTTGAAAGCAATCTCAAGAAAAGAGAAAAAAAAAAAAAAAAAGTAGTGTGTGAGGGTGGTAAGTATAGAATGAGAAGCAAATTGAATCACAATCCCATTTATCCCAGGAACTAAACCATGCTAATGTTTAGGCTTGATGAATTTGCTCTTCTTTTGAAATCAACCCCTGTTCTTTGTCAAGTTGGTCTAACTGTTGATATCAAAAGCACACCCAAGACCTTGACTCTAATGCTCACACACCATTCCCCTCGTTTCGTTGCTGCTCTCCAAATGTCCAATGAATTTTTCAACCTCTTTTACTAATTACACGCTGTCTTCCTTACATTTGAAGATTATAATTCAGGTCAAAAACCAAGAATTACGACGCGCCAATTGGATATGTTACCTTACAAAGTGGACCAACAATTGCGTATTGATTATAAAGCTTTTGTATCAATTGATTCAAAAGACTTCAAACGTGTTGTTTTGGAAATAAGTGCTCATTCTTCAGATTCAGAAGCCAAGTTTTCTAATGAAAATAAGGAGATTATTTTTACCAAAGAGGAAAGAAAATGTATAATTGGAGGTATTAAAAGGAGAAAGGAATATGAATTTGTAATTACACTTGATCCATTGTTGTTTTTTCTTGATTTGAGCTATCAAGCACAAAGAGTTTGGTTGTTCATGCAAAAGGATCTCTCAAGTATACTCGTTTTCCCCTCTGGACTGTGGACTCAGTTTTGGGTCTATTTCTGTCCCTGACGTATGTGAATTTTACCAACTTCTTCTTCCGTGAAGAAACACATTAATCTTCTTCTTCTTCTTTTTTTCTTTTTCTTTCTTTTTCTTTTTGATCAGTGTAGATTTATATATATATACCTAAAAGTCTTTAGTTGGATTCTAAAAATCTTAGTTGGATTAAAGCATATTATACCATTCAACTCCTTTACTTCC

Coding sequence (CDS)

ATGTTACCTTACAAAGTGGACCAACAATTGCGTATTGATTATAAAGCTTTTGTATCAATTGATTCAAAAGACTTCAAACGTGTTGTTTTGGAAATAAGTGCTCATTCTTCAGATTCAGAAGCCAAGTTTTCTAATGAAAATAAGGAGATTATTTTTACCAAAGAGGAAAGAAAATGTATAATTGGAGGTATTAAAAGGAGAAAGGAATATGAATTTGTAATTACACTTGATCCATTGTTGTTTTTTCTTGATTTGAGCTATCAAGCACAAAGAGTTTGGTTGTTCATGCAAAAGGATCTCTCAAGTATACTCGTTTTCCCCTCTGGACTGTGGACTCAGTTTTGGGTCTATTTCTGTCCCTGA

Protein sequence

MLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHSSDSEAKFSNENKEIIFTKEERKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFWVYFCP
Homology
[Close]
BLAST of Cmc09g0245561 vs. NCBI nr
Match: KGN51160.1 (hypothetical protein Csa_008095 [Cucumis sativus])

HSP 1 Score: 205.7 bits (522), Expect = 2.3e-49
Identity = 102/125 (81.60%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 1   MLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKE 60
           +LPYKV+Q+LRIDYKAFVSIDSKDFKRVVLEI+AHS     SDSEA FSN+NK+IIFTKE
Sbjct: 7   LLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHSVFVNLSDSEATFSNDNKKIIFTKE 66

Query: 61  ERKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFW 120
           ERKCIIGGIK+ KEYE +ITL PL+FFLDLSYQAQR+WLF+QKD S+ILVFPSGLWTQFW
Sbjct: 67  ERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSGLWTQFW 126

[Close]
BLAST of Cmc09g0245561 vs. NCBI nr
Match: XP_023006012.1 (uncharacterized protein LOC111498889 [Cucurbita maxima])

HSP 1 Score: 137.9 bits (346), Expect = 5.8e-29
Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 0 

Query: 2   LPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEE 61
           LP ++++   IDY  FVSIDS+DF+R+VLE+  HS     ++S+ KFS   KEI+ TKEE
Sbjct: 89  LPLELEEMEHIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTNSQVKFSASRKEIVLTKEE 148

Query: 62  RKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFWV 119
           R+CIIGG+   KE+EF ITL PL+FF +LSY+A+R WLFM  + S+I+VFP G  TQ WV
Sbjct: 149 RRCIIGGLAEGKEFEFSITLHPLVFFHELSYKAKRAWLFMSINFSTIIVFPLGTSTQCWV 208

[Close]
BLAST of Cmc09g0245561 vs. NCBI nr
Match: XP_008458679.1 (PREDICTED: uncharacterized protein LOC103498007 [Cucumis melo])

HSP 1 Score: 135.2 bits (339), Expect = 3.8e-28
Identity = 63/123 (51.22%), Postives = 89/123 (72.36%), Query Frame = 0 

Query: 1   MLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKE 60
           +L Y +D    I+Y  F SIDSKDFK +V E ++ S     SDS+A+F   +KEI+FTKE
Sbjct: 122 LLAYDLDLYGDIEYTTFFSIDSKDFKHIVSEFNSRSVSVTFSDSQARFFTRSKEIVFTKE 181

Query: 61  ERKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFW 119
           E +C+IGG++  +E+ F+IT++PL+FFLDLS Q++RVW  MQ D S ++V P G+W QFW
Sbjct: 182 EDECVIGGVEEGEEFRFIITVNPLVFFLDLSNQSKRVWFLMQSDFSCMMVLPLGMWHQFW 241

[Close]
BLAST of Cmc09g0245561 vs. NCBI nr
Match: XP_031744098.1 (uncharacterized protein LOC116404778 [Cucumis sativus])

HSP 1 Score: 134.8 bits (338), Expect = 4.9e-28
Identity = 62/123 (50.41%), Postives = 89/123 (72.36%), Query Frame = 0 

Query: 1   MLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKE 60
           +L Y +D    I+Y  FVSIDS+DF+R+  E+++ S     ++S   F N+NKEI F+KE
Sbjct: 83  LLAYDLDLDGDIEYTTFVSIDSRDFRRIASELNSRSVSVTFTNSRVNFFNKNKEITFSKE 142

Query: 61  ERKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFW 119
           E +C+IGG++  +E+ F+IT+ PL+FFLDLS Q++RVW  MQ+D S I++ P GLW QFW
Sbjct: 143 ENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRDFSCIMILPLGLWQQFW 202

[Close]
BLAST of Cmc09g0245561 vs. NCBI nr
Match: KAG7013724.1 (hypothetical protein SDJN02_23891, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 132.9 bits (333), Expect = 1.9e-27
Identity = 66/122 (54.10%), Postives = 88/122 (72.13%), Query Frame = 0 

Query: 2   LPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEE 61
           LP ++++  +IDY  FVSIDS+DF+R+VLE+  HS     +DS+ KF    KEI+ TKEE
Sbjct: 85  LPLELEEMEQIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTDSQVKFGASRKEIVLTKEE 144

Query: 62  RKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFWV 119
           R+CIIGG+   + +EF ITL PL FF +LSY+A+R WLFM  + S+I+VFP G  TQ WV
Sbjct: 145 RQCIIGGLAEGEGFEFSITLRPLAFFHELSYKAKRAWLFMSINFSTIIVFPLGTRTQCWV 204

[Close]
BLAST of Cmc09g0245561 vs. ExPASy TrEMBL
Match: A0A0A0KNE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469020 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.1e-49
Identity = 102/125 (81.60%), Postives = 114/125 (91.20%), Query Frame = 0 

Query: 1   MLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKE 60
           +LPYKV+Q+LRIDYKAFVSIDSKDFKRVVLEI+AHS     SDSEA FSN+NK+IIFTKE
Sbjct: 7   LLPYKVNQELRIDYKAFVSIDSKDFKRVVLEINAHSVFVNLSDSEATFSNDNKKIIFTKE 66

Query: 61  ERKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFW 120
           ERKCIIGGIK+ KEYE +ITL PL+FFLDLSYQAQR+WLF+QKD S+ILVFPSGLWTQFW
Sbjct: 67  ERKCIIGGIKKGKEYEVLITLHPLVFFLDLSYQAQRLWLFIQKDFSTILVFPSGLWTQFW 126

[Close]
BLAST of Cmc09g0245561 vs. ExPASy TrEMBL
Match: A0A6J1KUR4 (uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889 PE=4 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 2.8e-29
Identity = 68/122 (55.74%), Postives = 90/122 (73.77%), Query Frame = 0 

Query: 2   LPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKEE 61
           LP ++++   IDY  FVSIDS+DF+R+VLE+  HS     ++S+ KFS   KEI+ TKEE
Sbjct: 89  LPLELEEMEHIDYGTFVSIDSQDFRRIVLELDVHSVHVSLTNSQVKFSASRKEIVLTKEE 148

Query: 62  RKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFWV 119
           R+CIIGG+   KE+EF ITL PL+FF +LSY+A+R WLFM  + S+I+VFP G  TQ WV
Sbjct: 149 RRCIIGGLAEGKEFEFSITLHPLVFFHELSYKAKRAWLFMSINFSTIIVFPLGTSTQCWV 208

[Close]
BLAST of Cmc09g0245561 vs. ExPASy TrEMBL
Match: A0A1S3C901 (uncharacterized protein LOC103498007 OS=Cucumis melo OX=3656 GN=LOC103498007 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.8e-28
Identity = 63/123 (51.22%), Postives = 89/123 (72.36%), Query Frame = 0 

Query: 1   MLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKE 60
           +L Y +D    I+Y  F SIDSKDFK +V E ++ S     SDS+A+F   +KEI+FTKE
Sbjct: 122 LLAYDLDLYGDIEYTTFFSIDSKDFKHIVSEFNSRSVSVTFSDSQARFFTRSKEIVFTKE 181

Query: 61  ERKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFW 119
           E +C+IGG++  +E+ F+IT++PL+FFLDLS Q++RVW  MQ D S ++V P G+W QFW
Sbjct: 182 EDECVIGGVEEGEEFRFIITVNPLVFFLDLSNQSKRVWFLMQSDFSCMMVLPLGMWHQFW 241

[Close]
BLAST of Cmc09g0245561 vs. ExPASy TrEMBL
Match: A0A0A0K9W8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002330 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 2.4e-28
Identity = 62/123 (50.41%), Postives = 89/123 (72.36%), Query Frame = 0 

Query: 1   MLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKE 60
           +L Y +D    I+Y  FVSIDS+DF+R+  E+++ S     ++S   F N+NKEI F+KE
Sbjct: 122 LLAYDLDLDGDIEYTTFVSIDSRDFRRIASELNSRSVSVTFTNSRVNFFNKNKEITFSKE 181

Query: 61  ERKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFW 119
           E +C+IGG++  +E+ F+IT+ PL+FFLDLS Q++RVW  MQ+D S I++ P GLW QFW
Sbjct: 182 ENQCVIGGVEEGEEFRFIITVHPLVFFLDLSSQSKRVWFLMQRDFSCIMILPLGLWQQFW 241

[Close]
BLAST of Cmc09g0245561 vs. ExPASy TrEMBL
Match: A0A6J1L0Z0 (uncharacterized protein LOC111498891 OS=Cucurbita maxima OX=3661 GN=LOC111498891 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.0e-26
Identity = 64/123 (52.03%), Postives = 92/123 (74.80%), Query Frame = 0 

Query: 1   MLPYKVDQQLRIDYKAFVSIDSKDFKRVVLEISAHS-----SDSEAKFSNENKEIIFTKE 60
           +LP +V++  +IDY  FVSIDS DF+RV+LE++A+S     +DS+ KFS  + EI+FTKE
Sbjct: 119 LLPLEVEKIEQIDYGTFVSIDSHDFRRVLLELNAYSVHVSVTDSQVKFSTSSDEIVFTKE 178

Query: 61  ERKCIIGGIKRRKEYEFVITLDPLLFFLDLSYQAQRVWLFMQKDLSSILVFPSGLWTQFW 119
           ER+ IIGG++  +E +F+ITL PL+FF DLSY+A+R W FM  + SS+++   G+  QFW
Sbjct: 179 ERRSIIGGLREGEEVKFLITLYPLVFFHDLSYEAKRAWFFMSNNFSSVIIHFFGISFQFW 238

The following BLAST results are available for this feature:
BLAST of Cmc09g0245561 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN51160.12.3e-4981.60hypothetical protein Csa_008095 [Cucumis sativus][more]
XP_023006012.15.8e-2955.74uncharacterized protein LOC111498889 [Cucurbita maxima][more]
XP_008458679.13.8e-2851.22PREDICTED: uncharacterized protein LOC103498007 [Cucumis melo][more]
XP_031744098.14.9e-2850.41uncharacterized protein LOC116404778 [Cucumis sativus][more]
KAG7013724.11.9e-2754.10hypothetical protein SDJN02_23891, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Cmc09g0245561 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc09g0245561 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KNE71.1e-4981.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G469020 PE=4 SV=1[more]
A0A6J1KUR42.8e-2955.74uncharacterized protein LOC111498889 OS=Cucurbita maxima OX=3661 GN=LOC111498889... [more]
A0A1S3C9011.8e-2851.22uncharacterized protein LOC103498007 OS=Cucumis melo OX=3656 GN=LOC103498007 PE=... [more]
A0A0A0K9W82.4e-2850.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G002330 PE=4 SV=1[more]
A0A6J1L0Z01.0e-2652.03uncharacterized protein LOC111498891 OS=Cucurbita maxima OX=3661 GN=LOC111498891... [more]
BLAST of Cmc09g0245561 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0245561.1Cmc09g0245561.1mRNA