Cmc09g0244931 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0244931
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cystatin
Location	CMiso1.1chr09: 8057641 .. 8058145 (+)
RNA-Seq Expression	Cmc09g0244931
Synteny	Cmc09g0244931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATTGTTACAGAAATATCATCCTATATCAGAAGGGTACGTATTAGGAGGAATGAGTTTAGATGATCTTTCCAACCTTGATCCAGTGCCATTTAAGGATGTTGATAGCGAAGAGATACAAGGATTTGGAGCGTTTGCAGTGCGTGAGCATAATGAAGAAAAAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTTGAACAGGGACGAAGGGGTATTCGAATAATTTTCACTGTTGTCCTGTCAGCTAAAAACTGTAATGGAATTATTTGGACTTATAAAGCTAAAGTCTTTTTTAATCAACGAGCTGCAGTACGTCTCTTGGAGTTTGAAGCTGTACTTCCTGAGAATGGAAACCAACAAAGCTAAATCTGCCATGTCTACCCAACAAATATGCAAACATATCTATGAAATTTATTAAAATAAAATAAAATAAATAAATTATTATATATATCTTATGTTTTTCTCTTCTCTTTCTCTTTCCCTTTCACTCTCTCTAATT

mRNA sequence

CCATTGTTACAGAAATATCATCCTATATCAGAAGGGTACGTATTAGGAGGAATGAGTTTAGATGATCTTTCCAACCTTGATCCAGTGCCATTTAAGGATGTTGATAGCGAAGAGATACAAGGATTTGGAGCGTTTGCAGTGCGTGAGCATAATGAAGAAAAAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTTGAACAGGGACGAAGGGGTATTCGAATAATTTTCACTGTTGTCCTGTCAGCTAAAAACTGTAATGGAATTATTTGGACTTATAAAGCTAAAGTCTTTTTTAATCAACGAGCTGCAGTACGTCTCTTGGAGTTTGAAGCTGTACTTCCTGAGAATGGAAACCAACAAAGCTAAATCTGCCATGTCTACCCAACAAATATGCAAACATATCTATGAAATTTATTAAAATAAAATAAAATAAATAAATTATTATATATATCTTATGTTTTTCTCTTCTCTTTCTCTTTCCCTTTCACTCTCTCTAATT

Coding sequence (CDS)

ATGAGTTTAGATGATCTTTCCAACCTTGATCCAGTGCCATTTAAGGATGTTGATAGCGAAGAGATACAAGGATTTGGAGCGTTTGCAGTGCGTGAGCATAATGAAGAAAAAGGAGAAAATCTGGAGTTTGTGAAGGTGATAAATGGGTTTGAACAGGGACGAAGGGGTATTCGAATAATTTTCACTGTTGTCCTGTCAGCTAAAAACTGTAATGGAATTATTTGGACTTATAAAGCTAAAGTCTTTTTTAATCAACGAGCTGCAGTACGTCTCTTGGAGTTTGAAGCTGTACTTCCTGAGAATGGAAACCAACAAAGCTAA

Protein sequence

MSLDDLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRRGIRIIFTVVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQQS

Homology

[Close]

BLAST of Cmc09g0244931 vs. NCBI nr
Match: KAA0040521.1 (Cystatin [Cucumis melo var. makuwa] >TYK05563.1 Cystatin [Cucumis melo var. makuwa])

HSP 1 Score: 199.5 bits (506), Expect = 1.4e-47
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 1   MSLDDLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRRGIRII 60
           MS +DLSNLDPVP KDVDSEEIQG G FAVREHNEEKGENLEFVKVINGFEQGRRG+RII
Sbjct: 1   MSSEDLSNLDPVPIKDVDSEEIQGLGEFAVREHNEEKGENLEFVKVINGFEQGRRGVRII 60

Query: 61  FTVVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQ 105
           FT+VLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQ
Sbjct: 61  FTIVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQ 104

[Close]

BLAST of Cmc09g0244931 vs. NCBI nr
Match: KAE8648508.1 (hypothetical protein Csa_009101, partial [Cucumis sativus])

HSP 1 Score: 156.4 bits (394), Expect = 1.4e-34
Identity = 83/107 (77.57%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MSLDDLS--NLDP-VPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRRGI 60
           MS +D+S   +DP VP KDVDSEEI+GFG FAV EHNE  GENLEFVKVING EQGRRG 
Sbjct: 18  MSSEDISIPKVDPAVPIKDVDSEEIRGFGEFAVSEHNEATGENLEFVKVINGLEQGRRGF 77

Query: 61  RIIFTVVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQ 105
           RI FT+VLSAKN  GIIWTYK KVF NQRA VRLLEFEAVL ENGNQ
Sbjct: 78  RIDFTLVLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNENGNQ 124

[Close]

BLAST of Cmc09g0244931 vs. NCBI nr
Match: KAA0040524.1 (Cystatin [Cucumis melo var. makuwa] >TYK05566.1 Cystatin [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.5e-33
Identity = 77/93 (82.80%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 12  VPFKDVDSEEIQGFGAFAVREHNE-EKGENLEFVKVINGFEQGRRGIRIIFTVVLSAKNC 71
           VP KDVDSEEIQGFG FAVR+HN+   GENLEFVKVING EQGRRG RI++T+VLSAKN 
Sbjct: 15  VPIKDVDSEEIQGFGRFAVRKHNKISTGENLEFVKVINGLEQGRRGFRIVYTLVLSAKNS 74

Query: 72  NGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGN 104
            GIIWTYKAKVFFN RAAV LLEFEAVLPENGN
Sbjct: 75  CGIIWTYKAKVFFNNRAAVLLLEFEAVLPENGN 107

[Close]

BLAST of Cmc09g0244931 vs. NCBI nr
Match: KGN51193.1 (hypothetical protein Csa_008046 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 7.1e-31
Identity = 73/98 (74.49%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 6   LSNLDPVPFKDVDSEEIQGFGAFAVREHNE-EKGENLEFVKVINGFEQGRRGIRIIFTVV 65
           L + D VP KDVDSEEIQG G  AVR HNE   GENLEFVKVING E+GRRG +I++T+V
Sbjct: 15  LPDYDTVPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGRRGFQIVYTLV 74

Query: 66  LSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENG 103
           LSAKN  GI+WTYKAKV FN RAAVRL EFEAVLPENG
Sbjct: 75  LSAKNSLGIVWTYKAKVIFNNRAAVRLPEFEAVLPENG 112

[Close]

BLAST of Cmc09g0244931 vs. NCBI nr
Match: KAA0040520.1 (Cystatin [Cucumis melo var. makuwa] >TYK22030.1 Cystatin [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 5.3e-26
Identity = 71/106 (66.98%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 1   MSLDDLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRRGIRII 60
           MS +DLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRR     
Sbjct: 1   MSFEDLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRR----- 60

Query: 61  FTVVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQQS 107
                                       VRLLEFEAVLPENGNQQS
Sbjct: 61  ----------------------------VRLLEFEAVLPENGNQQS 73

[Close]

BLAST of Cmc09g0244931 vs. ExPASy TrEMBL
Match: A0A5A7TFU6 (Cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00010 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 6.9e-48
Identity = 97/104 (93.27%), Postives = 100/104 (96.15%), Query Frame = 0


Query: 1   MSLDDLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRRGIRII 60
           MS +DLSNLDPVP KDVDSEEIQG G FAVREHNEEKGENLEFVKVINGFEQGRRG+RII
Sbjct: 1   MSSEDLSNLDPVPIKDVDSEEIQGLGEFAVREHNEEKGENLEFVKVINGFEQGRRGVRII 60

Query: 61  FTVVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQ 105
           FT+VLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQ
Sbjct: 61  FTIVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQ 104

[Close]

BLAST of Cmc09g0244931 vs. ExPASy TrEMBL
Match: A0A0A0KRZ8 (Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487690 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.7e-35
Identity = 83/107 (77.57%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MSLDDLS--NLDP-VPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRRGI 60
           MS +D+S   +DP VP KDVDSEEI+GFG FAV EHNE  GENLEFVKVING EQGRRG 
Sbjct: 1   MSSEDISIPKVDPAVPIKDVDSEEIRGFGEFAVSEHNEATGENLEFVKVINGLEQGRRGF 60

Query: 61  RIIFTVVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQ 105
           RI FT+VLSAKN  GIIWTYK KVF NQRA VRLLEFEAVL ENGNQ
Sbjct: 61  RIDFTLVLSAKNSIGIIWTYKVKVFLNQRAGVRLLEFEAVLNENGNQ 107

[Close]

BLAST of Cmc09g0244931 vs. ExPASy TrEMBL
Match: A0A5D3C5B1 (Cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00040 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.4e-34
Identity = 77/93 (82.80%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 12  VPFKDVDSEEIQGFGAFAVREHNE-EKGENLEFVKVINGFEQGRRGIRIIFTVVLSAKNC 71
           VP KDVDSEEIQGFG FAVR+HN+   GENLEFVKVING EQGRRG RI++T+VLSAKN 
Sbjct: 15  VPIKDVDSEEIQGFGRFAVRKHNKISTGENLEFVKVINGLEQGRRGFRIVYTLVLSAKNS 74

Query: 72  NGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGN 104
            GIIWTYKAKVFFN RAAV LLEFEAVLPENGN
Sbjct: 75  CGIIWTYKAKVFFNNRAAVLLLEFEAVLPENGN 107

[Close]

BLAST of Cmc09g0244931 vs. ExPASy TrEMBL
Match: A0A0A0KNL2 (Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487700 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.5e-31
Identity = 73/98 (74.49%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 6   LSNLDPVPFKDVDSEEIQGFGAFAVREHNE-EKGENLEFVKVINGFEQGRRGIRIIFTVV 65
           L + D VP KDVDSEEIQG G  AVR HNE   GENLEFVKVING E+GRRG +I++T+V
Sbjct: 15  LPDYDTVPIKDVDSEEIQGIGGMAVRMHNETSTGENLEFVKVINGLEKGRRGFQIVYTLV 74

Query: 66  LSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENG 103
           LSAKN  GI+WTYKAKV FN RAAVRL EFEAVLPENG
Sbjct: 75  LSAKNSLGIVWTYKAKVIFNNRAAVRLPEFEAVLPENG 112

[Close]

BLAST of Cmc09g0244931 vs. ExPASy TrEMBL
Match: A0A5D3DF67 (Cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26872G00010 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.6e-26
Identity = 71/106 (66.98%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 1   MSLDDLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRRGIRII 60
           MS +DLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRR     
Sbjct: 1   MSFEDLSNLDPVPFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRR----- 60

Query: 61  FTVVLSAKNCNGIIWTYKAKVFFNQRAAVRLLEFEAVLPENGNQQS 107
                                       VRLLEFEAVLPENGNQQS
Sbjct: 61  ----------------------------VRLLEFEAVLPENGNQQS 73

[Close]

BLAST of Cmc09g0244931 vs. TAIR 10
Match: AT4G16500.1 (Cystatin/monellin superfamily protein )

HSP 1 Score: 43.9 bits (102), Expect = 9.4e-05
Identity = 24/69 (34.78%), Postives = 38/69 (55.07%), Query Frame = 0


Query: 13  PFKDVDSEEIQGFGAFAVREHNEEKGENLEFVKVINGFEQGRRGIRIIFTVVLSAKNCNG 72
           P K+V   ++     +A+ EHN+E  E L FVKV+ G  Q   G +  + + ++AK+  G
Sbjct: 34  PIKNVSDPDVVAVAKYAIEEHNKESKEKLVFVKVVEGTTQVVSGTK--YDLKIAAKDGGG 93

Query: 73  IIWTYKAKV 82
            I  Y+A V
Sbjct: 94  KIKNYEAVV 100

The following BLAST results are available for this feature:

BLAST of Cmc09g0244931 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0040521.1	1.4e-47	93.27	Cystatin [Cucumis melo var. makuwa] >TYK05563.1 Cystatin [Cucumis melo var. maku...	[more]
KAE8648508.1	1.4e-34	77.57	hypothetical protein Csa_009101, partial [Cucumis sativus]	[more]
KAA0040524.1	1.5e-33	82.80	Cystatin [Cucumis melo var. makuwa] >TYK05566.1 Cystatin [Cucumis melo var. maku...	[more]
KGN51193.1	7.1e-31	74.49	hypothetical protein Csa_008046 [Cucumis sativus]	[more]
KAA0040520.1	5.3e-26	66.98	Cystatin [Cucumis melo var. makuwa] >TYK22030.1 Cystatin [Cucumis melo var. maku...	[more]

BLAST of Cmc09g0244931 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc09g0244931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TFU6	6.9e-48	93.27	Cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00010 PE=4 S...	[more]
A0A0A0KRZ8	6.7e-35	77.57	Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487690 PE...	[more]
A0A5D3C5B1	7.4e-34	82.80	Cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00040 PE=4 S...	[more]
A0A0A0KNL2	3.5e-31	74.49	Cystatin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487700 PE...	[more]
A0A5D3DF67	2.6e-26	66.98	Cystatin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold26872G00010 PE=...	[more]

BLAST of Cmc09g0244931 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16500.1	9.4e-05	34.78	Cystatin/monellin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.10		coord: 6..103 e-value: 9.1E-14 score: 53.3
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 18..95
IPR000010	Cystatin domain	PFAM	PF16845	SQAPI	coord: 15..93 e-value: 7.3E-14 score: 51.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0244931.1	Cmc09g0244931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010951	negative regulation of endopeptidase activity
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity