Cmc09g0244831 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0244831
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr09: 7914388 .. 7914777 (+)
RNA-Seq Expression	Cmc09g0244831
Synteny	Cmc09g0244831

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAGAAGATATAGAAAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTGGTGATGCCTTTCGGTCTCACAAATGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGTTGTGTTTTGGTATTTTTTGACGATATCTTAGTATATAGCAGTGACATAACTGAACATGAGAAACACCTAGGAATGGTTTTTGCTGTGCTAAGGGATAATCAACTTTATGCCAATCACAAGAAATGTGTATTTGCTCATTCTAGAATCCAATATTTGGGACACCAAATATCCAAGGCAGGGGTAGAGGCGGATGAAGACAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCATTGACAAGATAG

mRNA sequence

ATGAAGGAAGAAGATATAGAAAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTGGTGATGCCTTTCGGTCTCACAAATGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGTTGTGTTTTGGTATTTTTTGACGATATCTTAGTATATAGCAGTGACATAACTGAACATGAGAAACACCTAGGAATGGTTTTTGCTGTGCTAAGGGATAATCAACTTTATGCCAATCACAAGAAATGTGTATTTGCTCATTCTAGAATCCAATATTTGGGACACCAAATATCCAAGGCAGGGGTAGAGGCGGATGAAGACAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCATTGACAAGATAG

Coding sequence (CDS)

ATGAAGGAAGAAGATATAGAAAAGACAGCGTTTCGCACCCATGAAGGCCATTATGAATTCCTGGTGATGCCTTTCGGTCTCACAAATGCACCAGCAACGTTTCAATCACTGATGAATCAGGTTTTCAAGCCCTTCCTTAGACGTTGTGTTTTGGTATTTTTTGACGATATCTTAGTATATAGCAGTGACATAACTGAACATGAGAAACACCTAGGAATGGTTTTTGCTGTGCTAAGGGATAATCAACTTTATGCCAATCACAAGAAATGTGTATTTGCTCATTCTAGAATCCAATATTTGGGACACCAAATATCCAAGGCAGGGGTAGAGGCGGATGAAGACAAAATTAGAAGTATGGTAAATTGGCCAAGACCTTCATTGACAAGATAG

Protein sequence

MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVYSSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMVNWPRPSLTR

Homology

[Close]

BLAST of Cmc09g0244831 vs. NCBI nr
Match: KAA0043244.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 473 MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 532

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEAD+DKIRSMV
Sbjct: 533 SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMV 592

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 593 NWPRPS 598

[Close]

BLAST of Cmc09g0244831 vs. NCBI nr
Match: TYK14624.1 (uncharacterized protein E5676_scaffold1275G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 261.2 bits (666), Expect = 4.9e-66
Identity = 123/126 (97.62%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 452 MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 511

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSD+TEHEKHLGM+FAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEAD+DKIRSMV
Sbjct: 512 SSDLTEHEKHLGMIFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMV 571

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 572 NWPRPS 577

[Close]

BLAST of Cmc09g0244831 vs. NCBI nr
Match: TYK29308.1 (Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 261.2 bits (666), Expect = 4.9e-66
Identity = 123/126 (97.62%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 452 MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 511

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSD+TEHEKHLGM+FAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEAD+DKIRSMV
Sbjct: 512 SSDLTEHEKHLGMIFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMV 571

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 572 NWPRPS 577

[Close]

BLAST of Cmc09g0244831 vs. NCBI nr
Match: TYK08088.1 (uncharacterized protein E5676_scaffold265G002470 [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 8.3e-66
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKT FRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 306 MKEEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 365

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSDI+EHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV
Sbjct: 366 SSDISEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 425

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 426 NWPRPS 431

[Close]

BLAST of Cmc09g0244831 vs. NCBI nr
Match: KAA0048168.1 (uncharacterized protein E6C27_scaffold63G00690 [Cucumis melo var. makuwa])

HSP 1 Score: 260.4 bits (664), Expect = 8.3e-66
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKT FRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 306 MKEEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 365

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSDI+EHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV
Sbjct: 366 SSDISEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 425

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 426 NWPRPS 431

[Close]

BLAST of Cmc09g0244831 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.0e-26
Identity = 55/126 (43.65%), Postives = 80/126 (63.49%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           M EE I KTAF T  GHYE+L MPFGL NAPATFQ  MN + +P L +  LV+ DDI+++
Sbjct: 311 MDEESISKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIF 370

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           S+ +TEH   + +VF  L D  L     KC F      +LGH ++  G++ +  K++++V
Sbjct: 371 STSLTEHLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIV 430

Query: 121 NWPRPS 127
           ++P P+
Sbjct: 431 SYPIPT 436

[Close]

BLAST of Cmc09g0244831 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 3.3e-25
Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           M  E + KTAF T  GHYE+L MPFGL NAPATFQ  MN + +P L +  LV+ DDI+V+
Sbjct: 312 MDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVF 371

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           S+ + EH + LG+VF  L    L     KC F      +LGH ++  G++ + +KI ++ 
Sbjct: 372 STSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQ 431

Query: 121 NWPRPS 127
            +P P+
Sbjct: 432 KYPIPT 437

[Close]

BLAST of Cmc09g0244831 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.2e-22
Identity = 51/126 (40.48%), Postives = 79/126 (62.70%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKE DI KTAF T  G YEFL +PFGL NAPA FQ +++ + +  + +   V+ DDI+V+
Sbjct: 228 MKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVF 287

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           S D   H K+L +V A L    L  N +K  F  +++++LG+ ++  G++AD  K+R++ 
Sbjct: 288 SEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAIS 347

Query: 121 NWPRPS 127
             P P+
Sbjct: 348 EMPPPT 353

[Close]

BLAST of Cmc09g0244831 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-18
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           M+ +D  KTAF T  G YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++
Sbjct: 696 MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 755

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           S    EH KHL  V   L++  L    KKC FA    ++LG+ I    +   + K  ++ 
Sbjct: 756 SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 815

Query: 121 NWPRPSLTR 130
           ++P P   +
Sbjct: 816 DFPTPKTVK 822

[Close]

BLAST of Cmc09g0244831 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.4e-18
Identity = 50/129 (38.76%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           M+ +D  KTAF T  G YE+ VMPFGL NAP+TF   M   F+    R V V+ DDIL++
Sbjct: 722 MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 781

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           S    EH KHL  V   L++  L    KKC FA    ++LG+ I    +   + K  ++ 
Sbjct: 782 SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 841

Query: 121 NWPRPSLTR 130
           ++P P   +
Sbjct: 842 DFPTPKTVK 848

[Close]

BLAST of Cmc09g0244831 vs. ExPASy TrEMBL
Match: A0A5A7TIU7 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold110G001280 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 1.1e-66
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 473 MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 532

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEAD+DKIRSMV
Sbjct: 533 SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMV 592

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 593 NWPRPS 598

[Close]

BLAST of Cmc09g0244831 vs. ExPASy TrEMBL
Match: A0A5D3E0Q7 (Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00130 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66
Identity = 123/126 (97.62%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 452 MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 511

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSD+TEHEKHLGM+FAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEAD+DKIRSMV
Sbjct: 512 SSDLTEHEKHLGMIFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMV 571

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 572 NWPRPS 577

[Close]

BLAST of Cmc09g0244831 vs. ExPASy TrEMBL
Match: A0A5D3CUL0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1275G00160 PE=4 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.4e-66
Identity = 123/126 (97.62%), Postives = 126/126 (100.00%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 452 MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 511

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSD+TEHEKHLGM+FAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEAD+DKIRSMV
Sbjct: 512 SSDLTEHEKHLGMIFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADDDKIRSMV 571

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 572 NWPRPS 577

[Close]

BLAST of Cmc09g0244831 vs. ExPASy TrEMBL
Match: A0A5A7TYW6 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G00690 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.0e-66
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKT FRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 306 MKEEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 365

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSDI+EHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV
Sbjct: 366 SSDISEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 425

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 426 NWPRPS 431

[Close]

BLAST of Cmc09g0244831 vs. ExPASy TrEMBL
Match: A0A5D3CA79 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002470 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.0e-66
Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0


Query: 1   MKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 60
           MKEEDIEKT FRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY
Sbjct: 306 MKEEDIEKTTFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKPFLRRCVLVFFDDILVY 365

Query: 61  SSDITEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 120
           SSDI+EHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV
Sbjct: 366 SSDISEHEKHLGMVFAVLRDNQLYANHKKCVFAHSRIQYLGHQISKAGVEADEDKIRSMV 425

Query: 121 NWPRPS 127
           NWPRPS
Sbjct: 426 NWPRPS 431

The following BLAST results are available for this feature:

BLAST of Cmc09g0244831 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0043244.1	2.2e-66	99.21	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK14624.1	4.9e-66	97.62	uncharacterized protein E5676_scaffold1275G00160 [Cucumis melo var. makuwa]	[more]
TYK29308.1	4.9e-66	97.62	Transposon Ty3-G Gag-Pol polyprotein [Cucumis melo var. makuwa]	[more]
TYK08088.1	8.3e-66	98.41	uncharacterized protein E5676_scaffold265G002470 [Cucumis melo var. makuwa]	[more]
KAA0048168.1	8.3e-66	98.41	uncharacterized protein E6C27_scaffold63G00690 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc09g0244831 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.0e-26	43.65	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	3.3e-25	42.86	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	1.2e-22	40.48	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	1.4e-18	38.76	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.4e-18	38.76	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc09g0244831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TIU7	1.1e-66	99.21	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3E0Q7	2.4e-66	97.62	Transposon Ty3-G Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CUL0	2.4e-66	97.62	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5A7TYW6	4.0e-66	98.41	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]
A0A5D3CA79	4.0e-66	98.41	Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1...	[more]

BLAST of Cmc09g0244831 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 30..104 e-value: 4.9E-40 score: 139.1
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 13..104 e-value: 1.4E-21 score: 77.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..104 score: 12.729429
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 2..29 e-value: 4.9E-40 score: 139.1
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 2..126
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..126
None	No IPR available	CDD	cd01647	RT_LTR	coord: 1..102 e-value: 6.34986E-52 score: 160.068
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..126

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0244831.1	Cmc09g0244831.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding