Cmc09g0244291 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0244291
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionS-protein homolog
LocationCMiso1.1chr09: 7164137 .. 7164343 (-)
RNA-Seq ExpressionCmc09g0244291
SyntenyCmc09g0244291
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTTTTGGAAGAACGTTGTATTGGTGCACCTTTGCCGGCGCACTAAAACATGCTTCATTTGAAGTTTTTTGGCCAGAGAAAACAAATTGGCTTGAATCTCATTGCGCTAATTCAAATTGTGTTTGGGTAGTTAAAGATGATGGGTTTTATTTGCTTAATGGGTATCAAAATAAGTTGGACTTTGTTCATCCATGGGCATAA

mRNA sequence

ATGGATCTTTTTGGAAGAACGTTGTATTGGTGCACCTTTGCCGGCGCACTAAAACATGCTTCATTTGAAGTTTTTTGGCCAGAGAAAACAAATTGGCTTGAATCTCATTGCGCTAATTCAAATTGTGTTTGGGTAGTTAAAGATGATGGGTTTTATTTGCTTAATGGGTATCAAAATAAGTTGGACTTTGTTCATCCATGGGCATAA

Coding sequence (CDS)

ATGGATCTTTTTGGAAGAACGTTGTATTGGTGCACCTTTGCCGGCGCACTAAAACATGCTTCATTTGAAGTTTTTTGGCCAGAGAAAACAAATTGGCTTGAATCTCATTGCGCTAATTCAAATTGTGTTTGGGTAGTTAAAGATGATGGGTTTTATTTGCTTAATGGGTATCAAAATAAGTTGGACTTTGTTCATCCATGGGCATAA

Protein sequence

MDLFGRTLYWCTFAGALKHASFEVFWPEKTNWLESHCANSNCVWVVKDDGFYLLNGYQNKLDFVHPWA
Homology
BLAST of Cmc09g0244291 vs. NCBI nr
Match: XP_008458671.1 (PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo])

HSP 1 Score: 94.4 bits (233), Expect = 4.2e-16
Identity = 37/61 (60.66%), Postives = 41/61 (67.21%), Query Frame = 0

Query: 7   TLYWCTFAGALKHASFEVFWPEKTNWLESHCANSNCVWVVKDDGFYLLNGYQNKLDFVHP 66
           T +WC F   L HASFEVFWPE   WL   C+NSNCVWV  +DGF LLNG    L+F HP
Sbjct: 86  TKFWCNFQSRLGHASFEVFWPETGTWLSDRCSNSNCVWVASNDGFSLLNGPAKTLEFQHP 145

Query: 67  W 68
           W
Sbjct: 146 W 146

BLAST of Cmc09g0244291 vs. NCBI nr
Match: XP_011656368.1 (S-protein homolog 1 [Cucumis sativus] >KGN45709.1 hypothetical protein Csa_005711 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 6.6e-14
Identity = 36/62 (58.06%), Postives = 39/62 (62.90%), Query Frame = 0

Query: 7   TLYWCTFAGALKHASFEVFWPEKTNWLESHC-ANSNCVWVVKDDGFYLLNGYQNKLDFVH 66
           T YWC F   L HASFEVFWPE+  W    C +NSNCVWV   DGF LLN     L+F H
Sbjct: 86  TKYWCDFQSKLGHASFEVFWPERGTWFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQH 145

Query: 67  PW 68
           PW
Sbjct: 146 PW 147

BLAST of Cmc09g0244291 vs. NCBI nr
Match: KAE8652336.1 (hypothetical protein Csa_021865 [Cucumis sativus])

HSP 1 Score: 84.7 bits (208), Expect = 3.3e-13
Identity = 32/66 (48.48%), Postives = 42/66 (63.64%), Query Frame = 0

Query: 2   DLFGRTLYWCTFAGALKHASFEVFWPEKTNWLESHCANSNCVWVVKDDGFYLLNGYQNKL 61
           +++  TL+WC F+    HASFEVFWPEK  WLE  C   NC W   +DGF+L N  + K 
Sbjct: 64  NIWQTTLFWCDFSSLNGHASFEVFWPEKGEWLEYRCDYGNCTWAATNDGFFLANIPERKF 123

Query: 62  DFVHPW 68
           +F+H W
Sbjct: 124 EFMHYW 129

BLAST of Cmc09g0244291 vs. NCBI nr
Match: XP_038907112.1 (S-protein homolog 74-like [Benincasa hispida])

HSP 1 Score: 84.7 bits (208), Expect = 3.3e-13
Identity = 34/61 (55.74%), Postives = 38/61 (62.30%), Query Frame = 0

Query: 7   TLYWCTFAGALKHASFEVFWPEKTNWLESHCANSNCVWVVKDDGFYLLNGYQNKLDFVHP 66
           T +WC F   L HASFEVFWPE   WL   C +SNCVWV  + GF LLN     L+F HP
Sbjct: 86  TRFWCNFQSRLGHASFEVFWPESGTWLSDRCDDSNCVWVADNKGFSLLNIPTKTLEFQHP 145

Query: 67  W 68
           W
Sbjct: 146 W 146

BLAST of Cmc09g0244291 vs. NCBI nr
Match: XP_004136434.3 (S-protein homolog 1-like [Cucumis sativus])

HSP 1 Score: 82.4 bits (202), Expect = 1.6e-12
Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 0

Query: 2   DLFGRTLYWCTFAGALKHASFEVFWPEKTNWLESHCANSNCVWVVKDDGFYLLNGYQNKL 61
           +L+  TLYWC    A  HASF VFWPEK+ WL   C   NC+W  +DDG YL     N  
Sbjct: 75  NLWQTTLYWCYMHNAESHASFNVFWPEKSGWLAFRCQLRNCIWSARDDGIYLKTNPHNTF 134

Query: 62  DFVHPW 68
           + +H W
Sbjct: 135 ELIHTW 140

BLAST of Cmc09g0244291 vs. ExPASy TrEMBL
Match: A0A1S3C8Z6 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16
Identity = 37/61 (60.66%), Postives = 41/61 (67.21%), Query Frame = 0

Query: 7   TLYWCTFAGALKHASFEVFWPEKTNWLESHCANSNCVWVVKDDGFYLLNGYQNKLDFVHP 66
           T +WC F   L HASFEVFWPE   WL   C+NSNCVWV  +DGF LLNG    L+F HP
Sbjct: 86  TKFWCNFQSRLGHASFEVFWPETGTWLSDRCSNSNCVWVASNDGFSLLNGPAKTLEFQHP 145

Query: 67  W 68
           W
Sbjct: 146 W 146

BLAST of Cmc09g0244291 vs. ExPASy TrEMBL
Match: A0A0A0KA40 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_6G007430 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.2e-14
Identity = 36/62 (58.06%), Postives = 39/62 (62.90%), Query Frame = 0

Query: 7   TLYWCTFAGALKHASFEVFWPEKTNWLESHC-ANSNCVWVVKDDGFYLLNGYQNKLDFVH 66
           T YWC F   L HASFEVFWPE+  W    C +NSNCVWV   DGF LLN     L+F H
Sbjct: 86  TKYWCDFQSKLGHASFEVFWPERGTWFSDRCGSNSNCVWVAAHDGFSLLNAPAKTLEFQH 145

Query: 67  PW 68
           PW
Sbjct: 146 PW 147

BLAST of Cmc09g0244291 vs. ExPASy TrEMBL
Match: A0A1S3CEQ0 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500111 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 2.3e-12
Identity = 32/68 (47.06%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 1   MDLFGRTLYWCTFAGALKHASFEVFWPEKTN-WLESHCANSNCVWVVKDDGFYLLNGYQN 60
           ++ FG TL+WC       + +FE FW EKT+ WL S C + NC+W+ KDDG YL N   N
Sbjct: 77  VNFFGTTLFWCYLKKPNFYVAFESFWVEKTHPWLTSRCFDKNCIWIAKDDGIYLRNNLTN 136

Query: 61  KLDFVHPW 68
             + VHPW
Sbjct: 137 VDELVHPW 144

BLAST of Cmc09g0244291 vs. ExPASy TrEMBL
Match: A0A6J1ESA0 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 5.1e-12
Identity = 30/68 (44.12%), Postives = 42/68 (61.76%), Query Frame = 0

Query: 1   MDLFGRTLYWCTFAGALKHASFEVFWPE-KTNWLESHCANSNCVWVVKDDGFYLLNGYQN 60
           ++L+G T +WCTF     H SF+VFWPE  + WL   C   +C+WV KD+G YL N  +N
Sbjct: 66  VNLWGSTRFWCTFDSQNGHLSFDVFWPEGDSTWLLERCGYGSCIWVAKDEGIYLKNDPRN 125

Query: 61  KLDFVHPW 68
             + +H W
Sbjct: 126 TFELIHKW 133

BLAST of Cmc09g0244291 vs. ExPASy TrEMBL
Match: A0A1S3CG89 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500542 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.7e-12
Identity = 33/67 (49.25%), Postives = 39/67 (58.21%), Query Frame = 0

Query: 1   MDLFGRTLYWCTFAGALKHASFEVFWPEKTNWLESHCANSNCVWVVKDDGFYLLNGYQNK 60
           + LFGRTL+WC         SFE FW EK  WL S C + NC+W+ KDDG YL N   N 
Sbjct: 75  VSLFGRTLFWCYLEKPNFSVSFESFWVEKHVWLNSRCYDKNCIWIAKDDGIYLRNNPVNI 134

Query: 61  LDFVHPW 68
            + VH W
Sbjct: 135 NERVHNW 141

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008458671.14.2e-1660.66PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo][more]
XP_011656368.16.6e-1458.06S-protein homolog 1 [Cucumis sativus] >KGN45709.1 hypothetical protein Csa_00571... [more]
KAE8652336.13.3e-1348.48hypothetical protein Csa_021865 [Cucumis sativus][more]
XP_038907112.13.3e-1355.74S-protein homolog 74-like [Benincasa hispida][more]
XP_004136434.31.6e-1246.97S-protein homolog 1-like [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3C8Z62.0e-1660.66S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103498000 PE=3 SV=1[more]
A0A0A0KA403.2e-1458.06S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_6G007430 PE=3 SV=1[more]
A0A1S3CEQ02.3e-1247.06S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500111 PE=3 SV=1[more]
A0A6J1ESA05.1e-1244.12S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111437334 PE=3 SV=1[more]
A0A1S3CG896.7e-1249.25S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103500542 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010264Plant self-incompatibility S1PFAMPF05938Self-incomp_S1coord: 3..67
e-value: 2.1E-11
score: 44.3
IPR010264Plant self-incompatibility S1PANTHERPTHR31232FAMILY NOT NAMEDcoord: 3..66
NoneNo IPR availablePANTHERPTHR31232:SF34PUTATIVE-RELATEDcoord: 3..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0244291.1Cmc09g0244291.1mRNA