Cmc09g0243971 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0243971
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Beta-galactosidase
Location	CMiso1.1chr09: 6583984 .. 6584537 (+)
RNA-Seq Expression	Cmc09g0243971
Synteny	Cmc09g0243971

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGATGAATTTGAAATCAAAGACTTGGGCAATCTGAAATATTTCCTTGGAATGGAGGTGGCTAGATCAAAAGAAGGTATTTCCGTGTCTCAGAGAAAATACACCCTTGATTTGCTAACCGAGACAGGTATGTTGGGATGTCGTTCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCGGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGATAGAAAGTCTACATCCGGTTATTGTACCTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGA

mRNA sequence

ATGGGTGATGAATTTGAAATCAAAGACTTGGGCAATCTGAAATATTTCCTTGGAATGGAGGTGGCTAGATCAAAAGAAGGTATTTCCGTGTCTCAGAGAAAATACACCCTTGATTTGCTAACCGAGACAGGTATGTTGGGATGTCGTTCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCGGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGATAGAAAGTCTACATCCGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGA

Coding sequence (CDS)

ATGGGTGATGAATTTGAAATCAAAGACTTGGGCAATCTGAAATATTTCCTTGGAATGGAGGTGGCTAGATCAAAAGAAGGTATTTCCGTGTCTCAGAGAAAATACACCCTTGATTTGCTAACCGAGACAGGTATGTTGGGATGTCGTTCTGCTGATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCGGATATTTCCTTTGCTGTGAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATGAGAAACATATGGAAGCTGTTAACAGAATCTTGAGATACTTGAAAAATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGGATCTGTTATTGATAGAAAGTCTACATCCGAAGCAAAGTGTTGTGGCCAGGAGCAGTGCTGA

Protein sequence

MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSEAKCCGQEQC

Homology

[Close]

BLAST of Cmc09g0243971 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1466

[Close]

BLAST of Cmc09g0243971 vs. NCBI nr
Match: KAA0031941.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1283 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1342

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1343 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1402

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1403 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1440

[Close]

BLAST of Cmc09g0243971 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1466

[Close]

BLAST of Cmc09g0243971 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1466

[Close]

BLAST of Cmc09g0243971 vs. NCBI nr
Match: KAA0025363.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 318.9 bits (816), Expect = 2.6e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1341 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1400

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1401 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1460

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1461 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1498

[Close]

BLAST of Cmc09g0243971 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 3.7e-32
Identity = 69/158 (43.67%), Postives = 97/158 (61.39%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            +   F +KD   L YFLG+E  R   G+ +SQR+Y LDLL  T M+  +   TP+  + K
Sbjct: 1171 LSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPK 1230

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            L         D  +Y+ +VG L YL+ TRPDIS+AV+ +SQFM  P E+H++A+ RILRY
Sbjct: 1231 LSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRY 1290

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            L  TP  G+  +K N  ++ AY+D+DWAG   D  ST+
Sbjct: 1291 LAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTN 1328

[Close]

BLAST of Cmc09g0243971 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.1e-31
Identity = 68/159 (42.77%), Postives = 102/159 (64.15%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            +   F +K+  +L YFLG+E  R  +G+ +SQR+YTLDLL  T ML  +   TP+  + K
Sbjct: 1154 LSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPK 1213

Query: 61   LG-NSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILR 120
            L  +S  ++P D  +Y+ +VG L YL+ TRPD+S+AV+ +SQ+M  P + H  A+ R+LR
Sbjct: 1214 LTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLR 1273

Query: 121  YLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            YL  TP  G+  +K N  ++ AY+D+DWAG   D  ST+
Sbjct: 1274 YLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTN 1311

[Close]

BLAST of Cmc09g0243971 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.0e-26
Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
           +   F +KDLG + YFLG+++     G+ +SQ KY   +L   GML C+   TP+     
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86

Query: 61  LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
              S  + P D   ++ +VG L YL+ TRPDIS+AV++V Q M  P     + + R+LRY
Sbjct: 87  SSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 146

Query: 121 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
           +K T   GL   K ++  ++A+ DSDWAG    R+ST+
Sbjct: 147 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 183

[Close]

BLAST of Cmc09g0243971 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 97.8 bits (242), Expect = 1.2e-19
Identity = 56/161 (34.78%), Postives = 93/161 (57.76%), Query Frame = 0


Query: 3    DEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPI--EFNCK 62
            ++F + DL  +K+F+G+ +   ++ I +SQ  Y   +L++  M  C +  TP+  + N +
Sbjct: 1110 EKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYE 1169

Query: 63   LGNSDDQVPVDKEQYQRLVGKLIYLS-HTRPDISFAVSVVSQFMQAPYEKHMEAVNRILR 122
            L NSD+         + L+G L+Y+   TRPD++ AV+++S++      +  + + R+LR
Sbjct: 1170 LLNSDEDC---NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLR 1229

Query: 123  YLKNTPGKGLMFRK--TNRKTIEAYTDSDWAGSVIDRKSTS 159
            YLK T    L+F+K       I  Y DSDWAGS IDRKST+
Sbjct: 1230 YLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTT 1267

[Close]

BLAST of Cmc09g0243971 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.7e-19
Identity = 59/167 (35.33%), Postives = 94/167 (56.29%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEG--ISVSQRKYTLDLLTETGMLGCRSADTPIEFN 60
            +   F++KDLG  +  LGM++ R +    + +SQ KY   +L    M   +   TP+  +
Sbjct: 1029 LSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGH 1088

Query: 61   CKLGNS------DDQVPVDKEQYQRLVGKLIY-LSHTRPDISFAVSVVSQFMQAPYEKHM 120
             KL         +++  + K  Y   VG L+Y +  TRPDI+ AV VVS+F++ P ++H 
Sbjct: 1089 LKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHW 1148

Query: 121  EAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            EAV  ILRYL+ T G  L F  ++   ++ YTD+D AG + +RKS++
Sbjct: 1149 EAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSST 1194

[Close]

BLAST of Cmc09g0243971 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1466

[Close]

BLAST of Cmc09g0243971 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1466

[Close]

BLAST of Cmc09g0243971 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1466

[Close]

BLAST of Cmc09g0243971 vs. ExPASy TrEMBL
Match: A0A5A7SM64 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00220 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1    MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
            MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1309 MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 1368

Query: 61   LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
            LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 1369 LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 1428

Query: 121  LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 1429 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 1466

[Close]

BLAST of Cmc09g0243971 vs. ExPASy TrEMBL
Match: A0A5D3CPE2 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008150 PE=4 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 1.2e-83
Identity = 157/158 (99.37%), Postives = 157/158 (99.37%), Query Frame = 0


Query: 1   MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
           MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCR ADTPIEFNCK
Sbjct: 1   MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRPADTPIEFNCK 60

Query: 61  LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
           LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY
Sbjct: 61  LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120

Query: 121 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
           LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS
Sbjct: 121 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 158

[Close]

BLAST of Cmc09g0243971 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 140.6 bits (353), Expect = 1.2e-33
Identity = 68/154 (44.16%), Postives = 102/154 (66.23%), Query Frame = 0


Query: 5   FEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCKLGNS 64
           F+++DLG LKYFLG+E+ARS  GI++ QRKY LDLL ETG+LGC+ +  P++ +      
Sbjct: 308 FKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAH 367

Query: 65  DDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNT 124
                VD + Y+RL+G+L+YL  TR DISFAV+ +SQF +AP   H +AV +IL Y+K T
Sbjct: 368 SGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427

Query: 125 PGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
            G+GL +       ++ ++D+ +      R+ST+
Sbjct: 428 VGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTN 461

[Close]

BLAST of Cmc09g0243971 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 121.3 bits (303), Expect = 7.3e-28
Identity = 60/158 (37.97%), Postives = 90/158 (56.96%), Query Frame = 0


Query: 1   MGDEFEIKDLGNLKYFLGMEVARSKEGISVSQRKYTLDLLTETGMLGCRSADTPIEFNCK 60
           +   F +KDLG + YFLG+++     G+ +SQ KY   +L   GML C+   TP+     
Sbjct: 27  LSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILNNAGMLDCKPMSTPLPLKLN 86

Query: 61  LGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRY 120
              S  + P D   ++ +VG L YL+ TRPDIS+AV++V Q M  P     + + R+LRY
Sbjct: 87  SSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLRY 146

Query: 121 LKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTS 159
           +K T   GL   K ++  ++A+ DSDWAG    R+ST+
Sbjct: 147 VKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 183

[Close]

BLAST of Cmc09g0243971 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 68.2 bits (165), Expect = 7.3e-12
Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 0


Query: 83  IYLSHTRPDISFAVSVVSQFMQAPYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAY 142
           +YL+ TRPD++FAV+ +SQF  A     M+AV ++L Y+K T G+GL +  T+   ++A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 143 TDSDWAGSVIDRKSTS 159
            DSDWA     R+S +
Sbjct: 61  ADSDWASCPDTRRSVT 76

The following BLAST results are available for this feature:

BLAST of Cmc09g0243971 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ99952.1	2.6e-83	99.37	Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu...	[more]
KAA0031941.1	2.6e-83	99.37	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
TYK08054.1	2.6e-83	99.37	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0048203.1	2.6e-83	99.37	Beta-galactosidase [Cucumis melo var. makuwa]	[more]
KAA0025363.1	2.6e-83	99.37	Beta-galactosidase [Cucumis melo var. makuwa]	[more]

BLAST of Cmc09g0243971 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	3.7e-32	43.67	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.1e-31	42.77	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	1.0e-26	37.97	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P04146	1.2e-19	34.78	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P10978	2.7e-19	35.33	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Cmc09g0243971 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BJK7	1.2e-83	99.37	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0...	[more]
A0A5D3C4T4	1.2e-83	99.37	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00...	[more]
A0A5A7VLQ7	1.2e-83	99.37	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0...	[more]
A0A5A7SM64	1.2e-83	99.37	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G0...	[more]
A0A5D3CPE2	1.2e-83	99.37	Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O...	[more]

BLAST of Cmc09g0243971 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.2e-33	44.16	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	7.3e-28	37.97	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	7.3e-12	42.11	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF335	SUBFAMILY NOT NAMED	coord: 6..151
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 6..151
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 7..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0243971.1	Cmc09g0243971.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003676	nucleic acid binding