Cmc09g0243021 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0243021
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr09: 5416960 .. 5418034 (+)
RNA-Seq Expression	Cmc09g0243021
Synteny	Cmc09g0243021

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTATTGTGATGCTTCAAGGCTAGGATTTGGTTGTATGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGAAATTGAAGGAGCATGAGTGTAATTACCCTATCCATGATCTTGAGCTAGCAGGAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCAGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAGAAAGAGCTAAATCTAAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCTAGGTAAGGCCAACGTAGTAGCGGATGCATTAAGTAGGAAGTCAAAACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGGGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGGTTCAGTCTTCTCTAGTAACTGAGATTGTAAGAAGACAGTAATTTATAGAAGAAGCTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAATAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCTGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCATAGTTCAGCTTACGCTATGCATCCAAGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTAGAATGAAACAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAAACATAGTCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATAGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGATTAAAGCGACATCTACGTTAGATCAGCTAGCTAGATTGTATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAAGTTTACTTCTAAATTTTTGGCCTAG

mRNA sequence

ATGATTTATTGTGATGCTTCAAGGCTAGGATTTGGTTGTATGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGAAATTGAAGGAGCATGAGTGTAATTACCCTATCCATGATCTTGAGCTAGCAGGAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCAGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAGAAAGAGCTAAATCTAAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCTAGGTAAGGCCAACGTAGTAGCGGATGCATTAAGTAGGAAGTCAAAACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGGGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGAAGAAGCTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAATAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCTGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCATAGTTCAGCTTACGCTATGCATCCAAGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTAGAATGAAACAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAAACATAGTCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATAGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGATTAAAGCGACATCTACGTTAGATCAGCTAGCTAGATTGTATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAAGTTTACTTCTAAATTTTTGGCCTAG

Coding sequence (CDS)

ATGATTTATTGTGATGCTTCAAGGCTAGGATTTGGTTGTATGCTTATGCAAGATGGGAATGTAATAGCTTATGCTTCAAGGAAATTGAAGGAGCATGAGTGTAATTACCCTATCCATGATCTTGAGCTAGCAGGAGTTGTTTTAGCACTAAAAATCTGGAGACACTATTTGTTCAGGGAAAAGTGCCATATTTTCACAGATCATAAAAGTCTGAAGTATATTTTTGATCAGAAAGAGCTAAATCTAAGACAAAGGCGATGGCTAGAACTGATTAAAGATTATGATTGTACTATAGAGTATCATCTAGGTAAGGCCAACGTAGTAGCGGATGCATTAAGTAGGAAGTCAAAACTTCCGAAGAGTGCCTTGTGTGGTATTCGAGTAGCTTTGTTGAATGAGTTAAGGGGTTCCAAGGCAGTAGTAACTACAGAGGATTCAGGAAGTCTCTTAGCTCAATTTCAGAAGAAGCTTGAGAAATCCAAGAAAGGCTTAGAGGTGGAGTTTGAGCTGAGAATAGATGGAGCCATTGTTAAACAAGGAAGATTATGTGTTCTGAATATCAGTGAGCTTAAGAATGCTATTCTAGAAGAAGCTCATAGTTCAGCTTACGCTATGCATCCAAGTAGCACCAAGATGTACAGAACTTTAAAGAAGACTTATTGGTGGCCTAGAATGAAACAAGAGATAGCTGAATATGTTGATAGATGTTTGATTTGTCAACAGGTTAAACCAGTAAAACATAGTCCAGGAGGATTTCTTAATCCTTTGCCAGTGCCAGAGTGGAAATGGGAGCATATTACTATAGATTTTCTATTTGGATTACCTCGTACATCCAGTGGACATGATGGTATATGGGTAATAGTAGACAGACTCACCAAGACGACACGATTTATACCGATTAAAGCGACATCTACGTTAGATCAGCTAGCTAGATTGTATGTTGATAAGATTGTGAGTCAGTATGGAGTACCAGTGTCCATAGTTTCAGATAGGGATCCGAAGTTTACTTCTAAATTTTTGGCCTAG

Protein sequence

MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFREKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQKKLEKSKKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTYWWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSGHDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKFLA

Homology

[Close]

BLAST of Cmc09g0243021 vs. NCBI nr
Match: KAA0050493.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1   MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
           +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 508 VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 567

Query: 61  KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
           KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 568 KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 627

Query: 121 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
           SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 628 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 687

Query: 181 KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
           KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 688 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 747

Query: 241 WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
           WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 748 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 807

Query: 301 HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
           HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 808 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 866

[Close]

BLAST of Cmc09g0243021 vs. NCBI nr
Match: KAA0050527.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1   MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
           +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 615 VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 674

Query: 61  KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
           KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 675 KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 734

Query: 121 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
           SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 735 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 794

Query: 181 KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
           KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 795 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 854

Query: 241 WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
           WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 855 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 914

Query: 301 HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
           HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 915 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 973

[Close]

BLAST of Cmc09g0243021 vs. NCBI nr
Match: KAA0066849.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
            +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 954  VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 1013

Query: 61   KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
            KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 1014 KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 1073

Query: 121  SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
            SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 1074 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 1133

Query: 181  KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
            KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 1134 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 1193

Query: 241  WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
            WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 1194 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 1253

Query: 301  HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
            HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 1254 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 1312

[Close]

BLAST of Cmc09g0243021 vs. NCBI nr
Match: KAA0042295.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
            +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 906  VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 965

Query: 61   KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
            KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 966  KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 1025

Query: 121  SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
            SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 1026 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 1085

Query: 181  KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
            KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 1086 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 1145

Query: 241  WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
            WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 1146 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 1205

Query: 301  HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
            HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 1206 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 1264

[Close]

BLAST of Cmc09g0243021 vs. NCBI nr
Match: KAA0035455.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK01987.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK03719.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >TYK25877.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 642.1 bits (1655), Expect = 2.7e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
            +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 954  VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 1013

Query: 61   KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
            KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 1014 KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 1073

Query: 121  SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
            SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 1074 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 1133

Query: 181  KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
            KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 1134 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 1193

Query: 241  WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
            WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 1194 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 1253

Query: 301  HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
            HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 1254 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 1312

[Close]

BLAST of Cmc09g0243021 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 172.6 bits (436), Expect = 7.9e-42
Identity = 123/361 (34.07%), Postives = 184/361 (50.97%), Query Frame = 0


Query: 5    DASRLGFGCMLMQDGN------VIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLF 64
            DAS+ G G +L +  N      V+ Y S+ L+  + NYP  +LEL G++ AL  +R+ L 
Sbjct: 893  DASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLH 952

Query: 65   REKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSR---- 124
             +   + TDH SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVADA+SR    
Sbjct: 953  GKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAVYT 1012

Query: 125  --------------KSKLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQKKLEKS 184
                          KS      LC   +  + EL  ++  VT ED  S    +QKKLE S
Sbjct: 1013 ITPETSRPIDTESWKSYYKSDPLCSAVLIHMKEL--TQHNVTPEDM-SAFRSYQKKLELS 1072

Query: 185  ---KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHS-SAYAMHPSSTKMYRTL 244
               +K   +E E+     I  Q RL V+ I + +NA++   H  + +  H   T     +
Sbjct: 1073 ETFRKNYSLEDEM-----IYYQDRL-VVPIKQ-QNAVMRLYHDHTLFGGHFGVTVTLAKI 1132

Query: 245  KKTYWWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPR 304
               Y+WP+++  I +Y+  C+ CQ +K  +    G L PLP+ E +W  I++DF+ GLP 
Sbjct: 1133 SPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPP 1192

Query: 305  TSSGHDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFT 338
            TS+  + I V+VDR +K   FI  + T    QL  L    I S +G P +I SDRD + T
Sbjct: 1193 TSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMT 1243

[Close]

BLAST of Cmc09g0243021 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 172.6 bits (436), Expect = 7.9e-42
Identity = 123/361 (34.07%), Postives = 184/361 (50.97%), Query Frame = 0


Query: 5    DASRLGFGCMLMQDGN------VIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLF 64
            DAS+ G G +L +  N      V+ Y S+ L+  + NYP  +LEL G++ AL  +R+ L 
Sbjct: 919  DASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELELLGIIKALHHFRYMLH 978

Query: 65   REKCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSR---- 124
             +   + TDH SL  + ++ E   R +RWL+ +  YD T+EY  G  NVVADA+SR    
Sbjct: 979  GKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLAGPKNVVADAISRAIYT 1038

Query: 125  --------------KSKLPKSALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQKKLEKS 184
                          KS      LC   +  + EL  ++  VT ED  S    +QKKLE S
Sbjct: 1039 ITPETSRPIDTESWKSYYKSDPLCSAVLIHMKEL--TQHNVTPEDM-SAFRSYQKKLELS 1098

Query: 185  ---KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHS-SAYAMHPSSTKMYRTL 244
               +K   +E E+     I  Q RL V+ I + +NA++   H  + +  H   T     +
Sbjct: 1099 ETFRKNYSLEDEM-----IYYQDRL-VVPIKQ-QNAVMRLYHDHTLFGGHFGVTVTLAKI 1158

Query: 245  KKTYWWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPR 304
               Y+WP+++  I +Y+  C+ CQ +K  +    G L PLP+ E +W  I++DF+ GLP 
Sbjct: 1159 SPIYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPP 1218

Query: 305  TSSGHDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFT 338
            TS+  + I V+VDR +K   FI  + T    QL  L    I S +G P +I SDRD + T
Sbjct: 1219 TSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPRTITSDRDVRMT 1269

[Close]

BLAST of Cmc09g0243021 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-40
Identity = 101/356 (28.37%), Postives = 180/356 (50.56%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGN-----VIAYASRKLKEHECNYPIHDLELAGVVLALKIWRH 60
            ++  DAS +  G +L Q  +      + Y S K+ + + NY + D E+  ++ +LK WRH
Sbjct: 709  LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768

Query: 61   YLFR--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADA 120
            YL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y  G AN +ADA
Sbjct: 769  YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADA 828

Query: 121  LSR----KSKLPKSALCGI-----RVALLNELRGSKAVVTTEDSGSLLAQFQKKLEKSKK 180
            LSR       +PK +         ++++ ++ +       T D+  L       L    K
Sbjct: 829  LSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL-----NLLNNEDK 888

Query: 181  GLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTYWW 240
             +E   +L+    I  + ++ + N ++L   I+++ H     +HP    +   + + + W
Sbjct: 889  RVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 948

Query: 241  PRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSGHD 300
              ++++I EYV  C  CQ  K   H P G L P+P  E  WE +++DF+  LP  SSG++
Sbjct: 949  KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYN 1008

Query: 301  GIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSK 339
             ++V+VDR +K    +P   + T +Q AR++  ++++ +G P  I++D D  FTS+
Sbjct: 1009 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc09g0243021 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-40
Identity = 101/356 (28.37%), Postives = 180/356 (50.56%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGN-----VIAYASRKLKEHECNYPIHDLELAGVVLALKIWRH 60
            ++  DAS +  G +L Q  +      + Y S K+ + + NY + D E+  ++ +LK WRH
Sbjct: 709  LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768

Query: 61   YLFR--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADA 120
            YL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y  G AN +ADA
Sbjct: 769  YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADA 828

Query: 121  LSR----KSKLPKSALCGI-----RVALLNELRGSKAVVTTEDSGSLLAQFQKKLEKSKK 180
            LSR       +PK +         ++++ ++ +       T D+  L       L    K
Sbjct: 829  LSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL-----NLLNNEDK 888

Query: 181  GLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTYWW 240
             +E   +L+    I  + ++ + N ++L   I+++ H     +HP    +   + + + W
Sbjct: 889  RVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 948

Query: 241  PRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSGHD 300
              ++++I EYV  C  CQ  K   H P G L P+P  E  WE +++DF+  LP  SSG++
Sbjct: 949  KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYN 1008

Query: 301  GIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSK 339
             ++V+VDR +K    +P   + T +Q AR++  ++++ +G P  I++D D  FTS+
Sbjct: 1009 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc09g0243021 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.9e-40
Identity = 101/356 (28.37%), Postives = 180/356 (50.56%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGN-----VIAYASRKLKEHECNYPIHDLELAGVVLALKIWRH 60
            ++  DAS +  G +L Q  +      + Y S K+ + + NY + D E+  ++ +LK WRH
Sbjct: 709  LLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRH 768

Query: 61   YLFR--EKCHIFTDHKSL--KYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADA 120
            YL    E   I TDH++L  +   + +  N R  RW   ++D++  I Y  G AN +ADA
Sbjct: 769  YLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADA 828

Query: 121  LSR----KSKLPKSALCGI-----RVALLNELRGSKAVVTTEDSGSLLAQFQKKLEKSKK 180
            LSR       +PK +         ++++ ++ +       T D+  L       L    K
Sbjct: 829  LSRIVDETEPIPKDSEDNSINFVNQISITDDFKNQVVTEYTNDTKLL-----NLLNNEDK 888

Query: 181  GLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTYWW 240
             +E   +L+    I  + ++ + N ++L   I+++ H     +HP    +   + + + W
Sbjct: 889  RVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTW 948

Query: 241  PRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSGHD 300
              ++++I EYV  C  CQ  K   H P G L P+P  E  WE +++DF+  LP  SSG++
Sbjct: 949  KGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYN 1008

Query: 301  GIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSK 339
             ++V+VDR +K    +P   + T +Q AR++  ++++ +G P  I++D D  FTS+
Sbjct: 1009 ALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQ 1058

[Close]

BLAST of Cmc09g0243021 vs. ExPASy TrEMBL
Match: A0A5A7U2V7 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00630 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
            +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 916  VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 975

Query: 61   KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
            KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 976  KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 1035

Query: 121  SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
            SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 1036 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 1095

Query: 181  KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
            KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 1096 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 1155

Query: 241  WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
            WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 1156 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 1215

Query: 301  HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
            HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 1216 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 1274

[Close]

BLAST of Cmc09g0243021 vs. ExPASy TrEMBL
Match: A0A5D3BHI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00450 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
            +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 954  VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 1013

Query: 61   KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
            KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 1014 KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 1073

Query: 121  SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
            SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 1074 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 1133

Query: 181  KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
            KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 1134 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 1193

Query: 241  WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
            WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 1194 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 1253

Query: 301  HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
            HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 1254 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 1312

[Close]

BLAST of Cmc09g0243021 vs. ExPASy TrEMBL
Match: A0A5A7T1Y5 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold436G00980 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1    MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
            +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 954  VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 1013

Query: 61   KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
            KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 1014 KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 1073

Query: 121  SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
            SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 1074 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 1133

Query: 181  KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
            KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 1134 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 1193

Query: 241  WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
            WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 1194 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 1253

Query: 301  HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
            HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 1254 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 1312

[Close]

BLAST of Cmc09g0243021 vs. ExPASy TrEMBL
Match: A0A5A7UUL6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00090 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1   MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
           +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 586 VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 645

Query: 61  KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
           KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 646 KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 705

Query: 121 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
           SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 706 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 765

Query: 181 KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
           KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 766 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 825

Query: 241 WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
           WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 826 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 885

Query: 301 HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
           HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 886 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 944

[Close]

BLAST of Cmc09g0243021 vs. ExPASy TrEMBL
Match: A0A5A7T3K4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold510G00170 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.3e-180
Identity = 318/359 (88.58%), Postives = 325/359 (90.53%), Query Frame = 0


Query: 1   MIYCDASRLGFGCMLMQDGNVIAYASRKLKEHECNYPIHDLELAGVVLALKIWRHYLFRE 60
           +IYCDASRLG GC+LMQDGNVIAYASR+LKEHECNYP HDLELA VVLALKIWRHYLF E
Sbjct: 555 VIYCDASRLGLGCVLMQDGNVIAYASRQLKEHECNYPTHDLELAAVVLALKIWRHYLFGE 614

Query: 61  KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHLGKANVVADALSRKSKLPK 120
           KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYH GKANVVADALSRKS+LPK
Sbjct: 615 KCHIFTDHKSLKYIFDQKELNLRQRRWLELIKDYDCTIEYHPGKANVVADALSRKSRLPK 674

Query: 121 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF--------------------QKKLEKS 180
           SALCGIRVALLNELRGSKAVVTTEDSGSLLAQF                    QKK EKS
Sbjct: 675 SALCGIRVALLNELRGSKAVVTTEDSGSLLAQFQVRSSLVTEIVRRQSEDSNLQKKFEKS 734

Query: 181 KKGLEVEFELRIDGAIVKQGRLCVLNISELKNAILEEAHSSAYAMHPSSTKMYRTLKKTY 240
           KKGLEVEFELR DGAIVKQGRLCV NISELKNAILEEAHSSAYAMHP STKMYRTLKKTY
Sbjct: 735 KKGLEVEFELRTDGAIVKQGRLCVPNISELKNAILEEAHSSAYAMHPGSTKMYRTLKKTY 794

Query: 241 WWPRMKQEIAEYVDRCLICQQVKPVKHSPGGFLNPLPVPEWKWEHITIDFLFGLPRTSSG 300
           WW  MKQEIAEYVDRCLICQQVKPV+  PGGFLNPLPVPEWKWEHIT+DFLFGLPRTSSG
Sbjct: 795 WWSGMKQEIAEYVDRCLICQQVKPVRQRPGGFLNPLPVPEWKWEHITMDFLFGLPRTSSG 854

Query: 301 HDGIWVIVDRLTKTTRFIPIKATSTLDQLARLYVDKIVSQYGVPVSIVSDRDPKFTSKF 340
           HDGIWVIVDRLTKTTRFIPIK TSTLDQLARLYVDKIVSQYGVPVSIVSDRDP+FTSKF
Sbjct: 855 HDGIWVIVDRLTKTTRFIPIKMTSTLDQLARLYVDKIVSQYGVPVSIVSDRDPRFTSKF 913

The following BLAST results are available for this feature:

BLAST of Cmc09g0243021 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0050493.1	2.7e-180	88.58	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0050527.1	2.7e-180	88.58	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0066849.1	2.7e-180	88.58	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0042295.1	2.7e-180	88.58	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]	[more]
KAA0035455.1	2.7e-180	88.58	DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa] >KAA0046782.1...	[more]

BLAST of Cmc09g0243021 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q99315	7.9e-42	34.07	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	7.9e-42	34.07	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q9UR07	1.9e-40	28.37	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	1.9e-40	28.37	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.9e-40	28.37	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc09g0243021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U2V7	1.3e-180	88.58	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A5D3BHI1	1.3e-180	88.58	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold11...	[more]
A0A5A7T1Y5	1.3e-180	88.58	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold43...	[more]
A0A5A7UUL6	1.3e-180	88.58	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5A7T3K4	1.3e-180	88.58	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold51...	[more]

BLAST of Cmc09g0243021 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.340.70		coord: 151..243 e-value: 7.5E-18 score: 66.6
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 2..339
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 2..115 e-value: 3.26135E-55 score: 174.603
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 2..94 e-value: 2.7E-29 score: 101.6
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 189..244 e-value: 4.9E-19 score: 68.1
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 254..341 e-value: 4.9E-16 score: 60.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 253..341 score: 10.317897
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 254..340
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 2..100

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0243021.1	Cmc09g0243021.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding