Cmc09g0242781 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0242781
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionNBS-LRR type resistance protein
LocationCMiso1.1chr09: 5047039 .. 5048097 (+)
RNA-Seq ExpressionCmc09g0242781
SyntenyCmc09g0242781
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGCCGCGCCGCGTCCAGCCCTCTCCGCGTGTGAGCCGCGTCCGCGTGGGAAGCCGCGCCGCGCGTTTCCGCGAAGCCGAGCCGCATCTCCTCCCTGTTGCAAGCCGAGCCGCACGCGTAGCCTCCTGTACCGAGTCGAGCCGGTCCCTGTCTTCTTCCAGCCGAGCCGCCAAGACCAAATTGGCTCCATCCACCTAGATTTTGGTAATTTAATTAATTATTGTGGCATTTCCCAGTAAGACTCCATGCTTCGGACGTCAATTAAATTAAATTGGGACTAAAATTTAGTTATTTTCCTTAAGGGACGTCTTGGACCAAGTAATTGCTGCAGCGCGGGAATTCTTCAGTAGGGGGGCTCGAGCACTGCAACCTCTCTAGGGTAAGTTATTTCAAATGAGTCTTGAACCGATAGTCGTTGGCGACCTAATTACGAATTTTGGCATATCAAACAGTTAGGACTTCATCGCTTGGAAAGCGTACTGCCTCGCGGTTAGGACTCGACAAGTAGATCTCCAGGTAAGAGATTCTACTACTAGCTTCATGTTTAGAAGTATGAGACCATGTATGCCCCGATTTTTTCATGTTAAGGATTAGACTGTACGTTGTCTGAGATAAACGTTAGTAGGAGGTAAATGACGATATAGTTATGCTATAATCTATTATGTGTGGCAAGAGCTGTTATGGTTACGACGAATGTCGGGACGGAGAGTGTAGAGATGATTTATGTGACATGTTATATGCTGATGCCATGTGTATGTATACTGCAATTAGGGTACCTGTTAGCTTAATCTGTTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTGAGGACTGTGTGGTCCGACGGGACACCAGTCTAGCATGGATATAGATGTGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGACTGTCCTAGGTGTCCCCCGGGGCACCGAAGACCAGAGTTACGTTCCTACGGGAGCGCATGATTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCAGTTATCAGGACTCTAACAGGAAGCTAACAGGCACCTAG

mRNA sequence

GAAGCCGCGCCGCGTCCAGCCCTCTCCGCGTGTGAGCCGCGTCCGCGTGGGAAGCCGCGCCGCGCGTTTCCGCGAAGCCGAGCCGCATCTCCTCCCTGTTGCAAGCCGAGCCGCACGCGTAGCCTCCTGTACCGAGTCGAGCCGGTCCCTGTCTTCTTCCAGCCGAGCCGCCAAGACCAAATTGGCTCCATCCACCTAGATTTTGGGACGTCTTGGACCAAGTAATTGCTGCAGCGCGGGAATTCTTCAGTAGGGGGGCTCGAGCACTGCAACCTCTCTAGGGTAAGTTATTTCAAATGAGTCTTGAACCGATAGTCGTTGGCGACCTAATTACGAATTTTGGCATATCAAACAGTTAGGACTTCATCGCTTGGAAAGCGTACTGCCTCGCGGTTAGGACTCGACAAGTAGATCTCCAGGTAAGAGATTCTACTACTAGCTTCATGTTTAGAAGTATGAGACCATGTATGCCCCGATTTTTTCATGTTAAGGATTAGACTGTACGTTGTCTGAGATAAACGTTAGTAGGAGGTAAATGACGATATAGTTATGCTATAATCTATTATGTGTGGCAAGAGCTGTTATGGTTACGACGAATGTCGGGACGGAGAGTGTAGAGATGATTTATGTGACATGTTATATGCTGATGCCATGTGTATGTATACTGCAATTAGGGTACCTGTTAGCTTAATCTGTTAGAGTCGTACCTGCATGGGTGTCCTTCGGGATCACCACCTATTGAGGACTGTGTGGTCCGACGGGACACCAGTCTAGCATGGATATAGATGTGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGACTGTCCTAGGTGTCCCCCGGGGCACCGAAGACCAGAGTTACGTTCCTACGGGAGCGCATGATTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCAGTTATCAGGACTCTAACAGGAAGCTAACAGGCACCTAG

Coding sequence (CDS)

ATGGATATAGATGTGACTCGAGTGACTCGACGGGGTCCTCGCATCCCGACTGTCCTAGGTGTCCCCCGGGGCACCGAAGACCAGAGTTACGTTCCTACGGGAGCGCATGATTGCACGTGTTCGGGAACGTGCCAGAGATTGGGTACCAGTTATCAGGACTCTAACAGGAAGCTAACAGGCACCTAG

Protein sequence

MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKLTGT
Homology
[Close]
BLAST of Cmc09g0242781 vs. NCBI nr
Match: TYK30274.1 (hypothetical protein E5676_scaffold344G00350 [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 1   MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKL 59
           MDID+TRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLG        KL
Sbjct: 130 MDIDMTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGRGRGKGKGKL 187

[Close]
BLAST of Cmc09g0242781 vs. NCBI nr
Match: KAA0060807.1 (Ulp1-like peptidase [Cucumis melo var. makuwa])

HSP 1 Score: 105.1 bits (261), Expect = 2.1e-19
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 1  MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKL 59
          MDID+TRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLG        KL
Sbjct: 1  MDIDMTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGRGRGKGKGKL 58

[Close]
BLAST of Cmc09g0242781 vs. NCBI nr
Match: KAA0053301.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 100.5 bits (249), Expect = 5.2e-18
Identity = 47/56 (83.93%), Postives = 48/56 (85.71%), Query Frame = 0 

Query: 3   IDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKL 59
           ID+TRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLG        KL
Sbjct: 787 IDMTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGRGRGKGKGKL 842

[Close]
BLAST of Cmc09g0242781 vs. NCBI nr
Match: KAA0039148.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 3.6e-11
Identity = 41/61 (67.21%), Postives = 43/61 (70.49%), Query Frame = 0 

Query: 1    MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKLTG 60
            MDID+TRVTRRGPR P VLGVPR TEDQS+VP G H       C R     QDSNRKLTG
Sbjct: 1295 MDIDITRVTRRGPRNPIVLGVPRDTEDQSFVPMGVHVARVR-ECARDWIQLQDSNRKLTG 1354

Query: 61   T 62
            T
Sbjct: 1355 T 1354

[Close]
BLAST of Cmc09g0242781 vs. NCBI nr
Match: KAA0033484.1 (hypothetical protein E6C27_scaffold261G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 76.6 bits (187), Expect = 8.1e-11
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 0 

Query: 1  MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAH 37
          MDID+TRVTRRGPRIPTVLGVPRGTEDQSYVPTGAH
Sbjct: 1  MDIDMTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAH 36

[Close]
BLAST of Cmc09g0242781 vs. ExPASy TrEMBL
Match: A0A5D3E316 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold344G00350 PE=4 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 1   MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKL 59
           MDID+TRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLG        KL
Sbjct: 130 MDIDMTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGRGRGKGKGKL 187

[Close]
BLAST of Cmc09g0242781 vs. ExPASy TrEMBL
Match: A0A5A7V1U0 (Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00290 PE=3 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 1.0e-19
Identity = 49/58 (84.48%), Postives = 50/58 (86.21%), Query Frame = 0 

Query: 1  MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKL 59
          MDID+TRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLG        KL
Sbjct: 1  MDIDMTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGRGRGKGKGKL 58

[Close]
BLAST of Cmc09g0242781 vs. ExPASy TrEMBL
Match: A0A5A7UIB4 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001140 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.5e-18
Identity = 47/56 (83.93%), Postives = 48/56 (85.71%), Query Frame = 0 

Query: 3   IDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKL 59
           ID+TRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLG        KL
Sbjct: 787 IDMTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGRGRGKGKGKL 842

[Close]
BLAST of Cmc09g0242781 vs. ExPASy TrEMBL
Match: A0A5A7T8E0 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00460 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.7e-11
Identity = 41/61 (67.21%), Postives = 43/61 (70.49%), Query Frame = 0 

Query: 1    MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAHDCTCSGTCQRLGTSYQDSNRKLTG 60
            MDID+TRVTRRGPR P VLGVPR TEDQS+VP G H       C R     QDSNRKLTG
Sbjct: 1295 MDIDITRVTRRGPRNPIVLGVPRDTEDQSFVPMGVHVARVR-ECARDWIQLQDSNRKLTG 1354

Query: 61   T 62
            T
Sbjct: 1355 T 1354

[Close]
BLAST of Cmc09g0242781 vs. ExPASy TrEMBL
Match: A0A5D3DCY9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold128G00060 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.9e-11
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 0 

Query: 1  MDIDVTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAH 37
          MDID+TRVTRRGPRIPTVLGVPRGTEDQSYVPTGAH
Sbjct: 1  MDIDMTRVTRRGPRIPTVLGVPRGTEDQSYVPTGAH 36

The following BLAST results are available for this feature:
BLAST of Cmc09g0242781 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK30274.12.1e-1984.48hypothetical protein E5676_scaffold344G00350 [Cucumis melo var. makuwa][more]
KAA0060807.12.1e-1984.48Ulp1-like peptidase [Cucumis melo var. makuwa][more]
KAA0053301.15.2e-1883.93pol protein [Cucumis melo var. makuwa][more]
KAA0039148.13.6e-1167.21pol protein [Cucumis melo var. makuwa][more]
KAA0033484.18.1e-1197.22hypothetical protein E6C27_scaffold261G00180 [Cucumis melo var. makuwa][more]
BLAST of Cmc09g0242781 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc09g0242781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3E3161.0e-1984.48Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V1U01.0e-1984.48Ulp1-like peptidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G... [more]
A0A5A7UIB42.5e-1883.93Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G001140 P... [more]
A0A5A7T8E01.7e-1167.21Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold121G00460 PE... [more]
A0A5D3DCY93.9e-1197.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cmc09g0242781 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0242781.1Cmc09g0242781.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006508 proteolysis
cellular_component GO:0016020 membrane
molecular_function GO:0008234 cysteine-type peptidase activity
molecular_function GO:0003676 nucleic acid binding