Cmc09g0241611 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0241611
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Photosystem I P700 chlorophyll a apoprotein A2
Location	CMiso1.1chr09: 3735564 .. 3736162 (-)
RNA-Seq Expression	Cmc09g0241611
Synteny	Cmc09g0241611

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATAGGACCCTTTACATGTCAGACCTATTGCTCATGCCTTGGCCCAATGAATATCGCTTATTCTAAGCATGGGTATATGGTCAATCAGCCTTCGAAGCTTTTACTCGAGGTGGTGCTCTTGGCCCAATGAATATCGCTTATTCTAGTGTTTATCAGTTTTAGTATACAATTGGTTTACGCACTAACGGGGAACTTTATACTGGAGCTGTTTCTCTATTATTTCTTTTTGCGATATCTTTAATACCTGGTTGGTTACATCTACAACCCAAATGGAAACTGAGCCTTTCCTGGTTTCAAAATGTCGAATCTCGTCTCAATCATCATTTTTCAAAACTATTTGGAATCAATTCCTTGGCTTGGACAGGACATTTAGTCCATATTTTTATTCCTGCATCCAGGGAAGAATCTGTTCGGTGGAAGAATTTCTTAGATGTATTGCCATATCCCCAAGGATTAGAACCACTTTTGACAGGTCAATGGAATCTTTATGCTCAAAATCTCAATTCAAATAATCATTTATTTGGTACTTTCGAAAGAGCAGGAACTGCCATTCTAACCCTTCTCGAGGGATTCCATCCGCAAGTGCAAAGTTAG

mRNA sequence

ATGGGTATAGGACCCTTTACATGTCAGACCTATTGCTCATGCCTTGGCCCAATGAATATCGCTTATTCTAAGCATGGGTATATGGTCAATCAGCCTTCGAAGCTTTTACTCGAGTATACAATTGGTTTACGCACTAACGGGGAACTTTATACTGGAGCTGTTTCTCTATTATTTCTTTTTGCGATATCTTTAATACCTGGTTGGTTACATCTACAACCCAAATGGAAACTGAGCCTTTCCTGGTTTCAAAATGTCGAATCTCGTCTCAATCATCATTTTTCAAAACTATTTGGAATCAATTCCTTGGCTTGGACAGGACATTTAGTCCATATTTTTATTCCTGCATCCAGGGAAGAATCTGTTCGGTGGAAGAATTTCTTAGATGTATTGCCATATCCCCAAGGATTAGAACCACTTTTGACAGGTCAATGGAATCTTTATGCTCAAAATCTCAATTCAAATAATCATTTATTTGGTACTTTCGAAAGAGCAGGAACTGCCATTCTAACCCTTCTCGAGGGATTCCATCCGCAAGTGCAAAGTTAG

Coding sequence (CDS)

ATGGGTATAGGACCCTTTACATGTCAGACCTATTGCTCATGCCTTGGCCCAATGAATATCGCTTATTCTAAGCATGGGTATATGGTCAATCAGCCTTCGAAGCTTTTACTCGAGTATACAATTGGTTTACGCACTAACGGGGAACTTTATACTGGAGCTGTTTCTCTATTATTTCTTTTTGCGATATCTTTAATACCTGGTTGGTTACATCTACAACCCAAATGGAAACTGAGCCTTTCCTGGTTTCAAAATGTCGAATCTCGTCTCAATCATCATTTTTCAAAACTATTTGGAATCAATTCCTTGGCTTGGACAGGACATTTAGTCCATATTTTTATTCCTGCATCCAGGGAAGAATCTGTTCGGTGGAAGAATTTCTTAGATGTATTGCCATATCCCCAAGGATTAGAACCACTTTTGACAGGTCAATGGAATCTTTATGCTCAAAATCTCAATTCAAATAATCATTTATTTGGTACTTTCGAAAGAGCAGGAACTGCCATTCTAACCCTTCTCGAGGGATTCCATCCGCAAGTGCAAAGTTAG

Protein sequence

MGIGPFTCQTYCSCLGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQGLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS

Homology

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BLAST of Cmc09g0241611 vs. NCBI nr
Match: YP_004841782.1 (photosystem I P700 apoprotein A2 [Cucumis melo subsp. melo] >YP_009004043.1 photosystem I P700 apoprotein A2 [Cucumis hystrix] >YP_009325988.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus lanatus] >YP_009346484.1 photosystem I P700 apoprotein A2 [Cucumis x hytivus] >YP_009348030.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus mucosospermus] >YP_009420793.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus colocynthis] >YP_009431556.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus amarus] >YP_009860072.1 photosystem I P700 apoprotein A2 [Cucumis melo subsp. agrestis] >YP_247598.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis sativus] >Q4VZN4.1 RecName: Full=Photosystem I P700 chlorophyll a apoprotein A2; AltName: Full=PSI-B; AltName: Full=PsaB [Cucumis sativus] >ALF03300.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis sativus var. hardwickii] >APW82460.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus lanatus subsp. vulgaris] >ASY96579.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. conomon] >ASY96666.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. makuwa] >ASY96753.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. momordica] >ASY96840.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. dudaim] >ASY96927.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. cantalupo] >ASY97101.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. inodorus] >ASY97275.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo var. flexuosus] >AVE15330.1 PsaB [Cucumis sativus var. sativus] >QJF46382.1 photosystem I P700 chlorophyll a apoprotein A2 [Cucumis melo] >QZL38680.1 photosystem I P700 apoprotein A2 [Citrullus ecirrhosus])

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. NCBI nr
Match: KAF9825350.1 (hypothetical protein H0E87_005072 [Populus deltoides])

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. NCBI nr
Match: YP_009752074.1 (photosystem I P700 apoprotein A2 [Dendrosicyos socotranus] >QIT05484.1 photosystem I P700 apoprotein A2 [Dendrosicyos socotranus])

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. NCBI nr
Match: YP_009431641.1 (photosystem I P700 chlorophyll a apoprotein A2 [Citrullus rehmii] >ASY96234.1 photosystem I P700 chlorophyll a apoprotein A2 [Citrullus rehmii])

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. NCBI nr
Match: YP_009753088.1 (photosystem I P700 apoprotein A2 [Corallocarpus boehmii] >QIT06160.1 photosystem I P700 apoprotein A2 [Corallocarpus boehmii])

HSP 1 Score: 255.8 bits (652), Expect = 2.9e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy Swiss-Prot
Match: Q4VZN4 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psaB PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 3.8e-67
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy Swiss-Prot
Match: Q8S8X5 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa belladonna OX=33113 GN=psaB PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 4.6e-65
Identity = 122/167 (73.05%), Postives = 134/167 (80.24%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTN +LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNEDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +S++HLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSSSHLFGTAEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy Swiss-Prot
Match: P58386 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Triticum aestivum OX=4565 GN=psaB PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 7.9e-65
Identity = 121/166 (72.89%), Postives = 132/166 (79.52%), Query Frame = 0


Query: 16  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKW 75
           GP+NIAYS               YTIGLRTN +LYTGA+ LLFL  +SLI GWLHLQPKW
Sbjct: 111 GPVNIAYS---------GVYQWWYTIGLRTNEDLYTGALFLLFLSTLSLIAGWLHLQPKW 170

Query: 76  KLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQG 135
           K SLSWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR E VRW NFLDVLPYPQG
Sbjct: 171 KPSLSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPYPQG 230

Query: 136 LEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           L PLLTGQWNLYAQN +S+NHLFGT + AGTAILTLL GFHPQ QS
Sbjct: 231 LGPLLTGQWNLYAQNPDSSNHLFGTAQGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy Swiss-Prot
Match: A1EA07 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Agrostis stolonifera OX=63632 GN=psaB PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-64
Identity = 120/166 (72.29%), Postives = 132/166 (79.52%), Query Frame = 0


Query: 16  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKW 75
           GP+NIAYS               YTIGLRTN +LYTGA+ LLFL  +SL+ GWLHLQPKW
Sbjct: 111 GPVNIAYS---------GVYQWWYTIGLRTNEDLYTGALFLLFLSTLSLVAGWLHLQPKW 170

Query: 76  KLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQG 135
           K SLSWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR E VRW NFLDVLPYPQG
Sbjct: 171 KPSLSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPYPQG 230

Query: 136 LEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           L PLLTGQWNLYAQN +S+NHLFGT + AGTAILTLL GFHPQ QS
Sbjct: 231 LGPLLTGQWNLYAQNPDSSNHLFGTAQGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy Swiss-Prot
Match: Q6ENH5 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Oryza nivara OX=4536 GN=psaB PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-64
Identity = 121/166 (72.89%), Postives = 132/166 (79.52%), Query Frame = 0


Query: 16  GPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKW 75
           GP+NIAYS               YTIGLRTN +LYTGA+ LLFL  +SLI GWLHLQPKW
Sbjct: 111 GPVNIAYS---------GVYQWWYTIGLRTNEDLYTGALFLLFLSTLSLIGGWLHLQPKW 170

Query: 76  KLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQG 135
           K SLSWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR E VRW NFLDVLPYPQG
Sbjct: 171 KPSLSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLDVLPYPQG 230

Query: 136 LEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           L PLLTGQWNLYAQN +S+NHLFGT + AGTAILTLL GFHPQ QS
Sbjct: 231 LGPLLTGQWNLYAQNPDSSNHLFGTTQGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy TrEMBL
Match: A0A218KG43 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus var. hardwickii OX=319220 GN=psaB PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy TrEMBL
Match: G3ETY4 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo subsp. melo OX=412675 GN=psaB PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy TrEMBL
Match: A0A1X9Q1T8 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psaB PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy TrEMBL
Match: A0A1S4EU08 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo OX=3656 GN=psaB PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. ExPASy TrEMBL
Match: A0A249RZ56 (Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo var. cantalupensis OX=3658 GN=psaB PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.4e-64
Identity = 125/167 (74.85%), Postives = 135/167 (80.84%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTNG+LYTGA+ LLFL AISLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNGDLYTGALFLLFLSAISLIAGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK S+SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR ESVRW NFLDVLP+PQ
Sbjct: 170 WKPSVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGESVRWNNFLDVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +SNNHLFGT E AGTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSNNHLFGTSEGAGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. TAIR 10
Match: ATCG00340.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 239.2 bits (609), Expect = 2.6e-63
Identity = 116/167 (69.46%), Postives = 132/167 (79.04%), Query Frame = 0


Query: 15  LGPMNIAYSKHGYMVNQPSKLLLEYTIGLRTNGELYTGAVSLLFLFAISLIPGWLHLQPK 74
           LGP+NIAYS               YTIGLRTN +LYTGA+ LLFL A+SLI GWLHLQPK
Sbjct: 110 LGPVNIAYS---------GVYQWWYTIGLRTNEDLYTGALFLLFLSALSLIGGWLHLQPK 169

Query: 75  WKLSLSWFQNVESRLNHHFSKLFGINSLAWTGHLVHIFIPASREESVRWKNFLDVLPYPQ 134
           WK  +SWF+N ESRLNHH S LFG++SLAWTGHLVH+ IPASR E VRW NFL+VLP+PQ
Sbjct: 170 WKPRVSWFKNAESRLNHHLSGLFGVSSLAWTGHLVHVAIPASRGEYVRWNNFLNVLPHPQ 229

Query: 135 GLEPLLTGQWNLYAQNLNSNNHLFGTFERAGTAILTLLEGFHPQVQS 182
           GL PL TGQWNLYAQN +S++HLFGT + +GTAILTLL GFHPQ QS
Sbjct: 230 GLGPLFTGQWNLYAQNPDSSSHLFGTSQGSGTAILTLLGGFHPQTQS 267

[Close]

BLAST of Cmc09g0241611 vs. TAIR 10
Match: ATCG00350.1 (Photosystem I, PsaA/PsaB protein )

HSP 1 Score: 73.9 bits (180), Expect = 1.4e-13
Identity = 41/126 (32.54%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 42  GLRTNGELYTGAVSLLFLFAISLIPGWLHLQPKWKLSLSWFQNVESRLNHHFSKLFGINS 101
           G+ +  +LY  A+  L   A+ L  GW H   K    L+WFQ+VES LNHH + L G+ S
Sbjct: 149 GITSELQLYCTAIGALVFAALMLFAGWFHYH-KAAPKLAWFQDVESMLNHHLAGLLGLGS 208

Query: 102 LAWTGHLVHIFIPASR--------------EESVRWKNFLDVL--PYPQGLEPLLTGQWN 152
           L+W GH VH+ +P ++               E +  ++ L  L   + +G  P  T  W+
Sbjct: 209 LSWAGHQVHVSLPINQFLNAGVDPKEIPLPHEFILNRDLLAQLYPSFAEGATPFFTLNWS 268

The following BLAST results are available for this feature:

BLAST of Cmc09g0241611 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_004841782.1	2.9e-64	74.85	photosystem I P700 apoprotein A2 [Cucumis melo subsp. melo] >YP_009004043.1 phot...	[more]
KAF9825350.1	2.9e-64	74.85	hypothetical protein H0E87_005072 [Populus deltoides]	[more]
YP_009752074.1	2.9e-64	74.85	photosystem I P700 apoprotein A2 [Dendrosicyos socotranus] >QIT05484.1 photosyst...	[more]
YP_009431641.1	2.9e-64	74.85	photosystem I P700 chlorophyll a apoprotein A2 [Citrullus rehmii] >ASY96234.1 ph...	[more]
YP_009753088.1	2.9e-64	74.85	photosystem I P700 apoprotein A2 [Corallocarpus boehmii] >QIT06160.1 photosystem...	[more]

BLAST of Cmc09g0241611 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZN4	3.8e-67	74.85	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psa...	[more]
Q8S8X5	4.6e-65	73.05	Photosystem I P700 chlorophyll a apoprotein A2 OS=Atropa belladonna OX=33113 GN=...	[more]
P58386	7.9e-65	72.89	Photosystem I P700 chlorophyll a apoprotein A2 OS=Triticum aestivum OX=4565 GN=p...	[more]
A1EA07	1.0e-64	72.29	Photosystem I P700 chlorophyll a apoprotein A2 OS=Agrostis stolonifera OX=63632 ...	[more]
Q6ENH5	1.0e-64	72.89	Photosystem I P700 chlorophyll a apoprotein A2 OS=Oryza nivara OX=4536 GN=psaB P...	[more]

BLAST of Cmc09g0241611 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A218KG43	1.4e-64	74.85	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus var. hardwicki...	[more]
G3ETY4	1.4e-64	74.85	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo subsp. melo OX=41...	[more]
A0A1X9Q1T8	1.4e-64	74.85	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis sativus OX=3659 GN=psa...	[more]
A0A1S4EU08	1.4e-64	74.85	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo OX=3656 GN=psaB P...	[more]
A0A249RZ56	1.4e-64	74.85	Photosystem I P700 chlorophyll a apoprotein A2 OS=Cucumis melo var. cantalupensi...	[more]

BLAST of Cmc09g0241611 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00340.1	2.6e-63	69.46	Photosystem I, PsaA/PsaB protein	[more]
ATCG00350.1	1.4e-13	32.54	Photosystem I, PsaA/PsaB protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001280	Photosystem I PsaA/PsaB	PRINTS	PR00257	PHOTSYSPSAAB	coord: 49..73 score: 50.93 coord: 89..113 score: 60.59
IPR001280	Photosystem I PsaA/PsaB	PFAM	PF00223	PsaA_PsaB	coord: 37..181 e-value: 6.7E-32 score: 110.6
IPR036408	Photosystem I PsaA/PsaB superfamily	GENE3D	1.20.1130.10	Photosystem I PsaA/PsaB	coord: 22..181 e-value: 2.4E-50 score: 173.3
IPR036408	Photosystem I PsaA/PsaB superfamily	SUPERFAMILY	81558	Photosystem I subunits PsaA/PsaB	coord: 38..180
None	No IPR available	PANTHER	PTHR30128:SF55	PHOTOSYSTEM I P700 CHLOROPHYLL A APOPROTEIN A2	coord: 13..181
None	No IPR available	PANTHER	PTHR30128	OUTER MEMBRANE PROTEIN, OMPA-RELATED	coord: 13..181

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0241611.1	Cmc09g0241611.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009579	thylakoid
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0009055	electron transfer activity
molecular_function	GO:0000287	magnesium ion binding