Cmc09g0241041 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc09g0241041
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Cytochrome c oxidase subunit 1
Location	CMiso1.1chr09: 3115259 .. 3115714 (-)
RNA-Seq Expression	Cmc09g0241041
Synteny	Cmc09g0241041

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCTACTTTTTCGAGAAAACTGGTTTTTAGGTATCTAGGCATAGTTTATGCCATGATCAGTATAGGTGTTCTTGGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACATGTGCCTACTTCACCGCTGCTATCATGATCATAGTACTCCACACTGGAATCAAAATCTTTAGTTGGATCGCTACCATATGGGGGGTTTTGATACAATACAAAACACCCATGTTATTTGCTGTAGAATCCATCTTTTTGTTCAACATAGGAGGATTCACTAGTATAGTTTTGAAAAATTCAGGGCTAGATATTGCTCTACATGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTTCTAATGGAGCCGTTTTTGCTTCATTGGACGATTTCACCATTGGATGGGTAAAATCTTTGGTCGGACATACCTTGAAACTTTAG

mRNA sequence

ATGGTTTCTACTTTTTCGAGAAAACTGGTTTTTAGGTATCTAGGCATAGTTTATGCCATGATCAGTATAGGTGTTCTTGGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACATGTGCCTACTTCACCGCTGCTATCATGATCATAGTACTCCACACTGGAATCAAAATCTTTAGTTGGATCGCTACCATATGGGGGGTTTTGATACAATACAAAACACCCATGTTATTTGCTGTAGAATCCATCTTTTTGTTCAACATAGGAGGATTCACTAGTATAGTTTTGAAAAATTCAGGGCTAGATATTGCTCTACATGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTTCTAATGGAGCCGTTTTTGCTTCATTGGACGATTTCACCATTGGATGGGTAAAATCTTTGGTCGGACATACCTTGAAACTTTAG

Coding sequence (CDS)

ATGGTTTCTACTTTTTCGAGAAAACTGGTTTTTAGGTATCTAGGCATAGTTTATGCCATGATCAGTATAGGTGTTCTTGGATTTCTTGTTTGGGCTCATCATATGTTTACTATGGGCTTAGACGTTGATACATGTGCCTACTTCACCGCTGCTATCATGATCATAGTACTCCACACTGGAATCAAAATCTTTAGTTGGATCGCTACCATATGGGGGGTTTTGATACAATACAAAACACCCATGTTATTTGCTGTAGAATCCATCTTTTTGTTCAACATAGGAGGATTCACTAGTATAGTTTTGAAAAATTCAGGGCTAGATATTGCTCTACATGATACTTATTATGTGGTTGCACATTTCCATTATGTACTTTCTAATGGAGCCGTTTTTGCTTCATTGGACGATTTCACCATTGGATGGGTAAAATCTTTGGTCGGACATACCTTGAAACTTTAG

Protein sequence

MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTGIKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHFHYVLSNGAVFASLDDFTIGWVKSLVGHTLKL

Homology

[Close]

BLAST of Cmc09g0241041 vs. NCBI nr
Match: VAI61370.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 218.4 bits (555), Expect = 4.2e-53
Identity = 115/148 (77.70%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAH MFT+GLDVDTCAYFTAA MI+ + TG
Sbjct: 82  IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHRMFTVGLDVDTCAYFTAATMIVAVPTG 141

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 142 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 201

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 202 HYVLSMGAVFALFSGFYY-WVGKIFGRT 228

[Close]

BLAST of Cmc09g0241041 vs. NCBI nr
Match: AAF77688.1 (cytochrome oxidase subunit 1, partial [Buxus sp. Qiu 94069])

HSP 1 Score: 218.4 bits (555), Expect = 4.2e-53
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDTCAYFTAA MII + TG
Sbjct: 225 IVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTCAYFTAATMIIAVPTG 284

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 285 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 344

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 345 HYVLSMGAVFALFAGFYY-WVGKIFGRT 371

[Close]

BLAST of Cmc09g0241041 vs. NCBI nr
Match: KAG6621736.1 (hypothetical protein I3842_Q015000 [Carya illinoinensis])

HSP 1 Score: 218.0 bits (554), Expect = 5.5e-53
Identity = 118/151 (78.15%), Postives = 123/151 (81.46%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 260 IVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 319

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IV  NSGLDIALHDTYY VAHF
Sbjct: 320 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVPANSGLDIALHDTYYAVAHF 379

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHTLKL 152
           HYVLS GAVFA    F     K LVGHTLKL
Sbjct: 380 HYVLSMGAVFALFAGFHYWVGKILVGHTLKL 410

[Close]

BLAST of Cmc09g0241041 vs. NCBI nr
Match: BCT43315.1 (cytochrome c oxidase subunit 1 [Musella lasiocarpa])

HSP 1 Score: 217.2 bits (552), Expect = 9.4e-53
Identity = 116/148 (78.38%), Postives = 123/148 (83.11%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 265 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 324

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQ+KTPMLFAV SIFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 325 IKIFSWIATMWGGSIQFKTPMLFAVGSIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 384

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 385 HYVLSMGAVFALFAGFHY-WVGKIFGRT 411

[Close]

BLAST of Cmc09g0241041 vs. NCBI nr
Match: BCT43201.1 (cytochrome c oxidase subunit 1 [Musa textilis] >BCT43239.1 cytochrome c oxidase subunit 1 [Musa beccarii])

HSP 1 Score: 217.2 bits (552), Expect = 9.4e-53
Identity = 116/148 (78.38%), Postives = 123/148 (83.11%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 265 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 324

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQ+KTPMLFAV SIFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 325 IKIFSWIATMWGGSIQFKTPMLFAVGSIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 384

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 385 HYVLSMGAVFALFAGFHY-WVGKIFGRT 411

[Close]

BLAST of Cmc09g0241041 vs. ExPASy Swiss-Prot
Match: P68540 (Cytochrome c oxidase subunit 1 OS=Aegilops columnaris OX=4493 GN=COX1 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-55
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 260 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 319

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 320 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 379

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 380 HYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of Cmc09g0241041 vs. ExPASy Swiss-Prot
Match: P08742 (Cytochrome c oxidase subunit 1 OS=Zea mays OX=4577 GN=COX1 PE=3 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-55
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 260 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 319

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 320 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 379

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 380 HYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of Cmc09g0241041 vs. ExPASy Swiss-Prot
Match: P14578 (Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COX1 PE=3 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-55
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 260 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 319

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 320 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 379

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 380 HYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of Cmc09g0241041 vs. ExPASy Swiss-Prot
Match: P05502 (Cytochrome c oxidase subunit 1 OS=Sorghum bicolor OX=4558 GN=COX1 PE=3 SV=2)

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-55
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 260 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 319

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 320 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 379

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 380 HYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of Cmc09g0241041 vs. ExPASy Swiss-Prot
Match: P68539 (Cytochrome c oxidase subunit 1 OS=Triticum aestivum OX=4565 GN=COX1 PE=3 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.1e-55
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 260 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 319

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 320 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 379

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 380 HYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of Cmc09g0241041 vs. ExPASy TrEMBL
Match: A0A446WML9 (Cytochrome c oxidase subunit 1 OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_6Bv1G191010 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.1e-53
Identity = 115/148 (77.70%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAH MFT+GLDVDTCAYFTAA MI+ + TG
Sbjct: 82  IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHRMFTVGLDVDTCAYFTAATMIVAVPTG 141

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 142 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 201

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 202 HYVLSMGAVFALFSGFYY-WVGKIFGRT 228

[Close]

BLAST of Cmc09g0241041 vs. ExPASy TrEMBL
Match: Q9MH10 (Cytochrome c oxidase subunit 1 (Fragment) OS=Buxus sp. Qiu 94069 OX=105810 GN=Cox1 PE=3 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 2.1e-53
Identity = 116/148 (78.38%), Postives = 122/148 (82.43%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDTCAYFTAA MII + TG
Sbjct: 225 IVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTCAYFTAATMIIAVPTG 284

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 285 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 344

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 345 HYVLSMGAVFALFAGFYY-WVGKIFGRT 371

[Close]

BLAST of Cmc09g0241041 vs. ExPASy TrEMBL
Match: A0A3B6U780 (Cytochrome c oxidase subunit 1 OS=Triticum aestivum OX=4565 PE=3 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 2.7e-53
Identity = 117/148 (79.05%), Postives = 123/148 (83.11%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MIIV+ TG
Sbjct: 260 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIVVPTG 319

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 320 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 379

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 380 HYVLSMGAVFALFAGFYY-WVGKIFGRT 406

[Close]

BLAST of Cmc09g0241041 vs. ExPASy TrEMBL
Match: Q94RS3 (Cytochrome c oxidase subunit 1 (Fragment) OS=Lachnocaulon anceps OX=76467 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.6e-53
Identity = 116/148 (78.38%), Postives = 123/148 (83.11%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 182 IVSTFSRKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 241

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 242 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 301

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  ++G T
Sbjct: 302 HYVLSMGAVFALFAGFYY-WVGKILGRT 328

[Close]

BLAST of Cmc09g0241041 vs. ExPASy TrEMBL
Match: A0A453N895 (Cytochrome c oxidase subunit 1 OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.6e-53
Identity = 119/153 (77.78%), Postives = 125/153 (81.70%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFSRK VF YLG+VYAM SIGVLGFLVWAHHMFT+GLDVDT AYFTAA MIIV+ TG
Sbjct: 50  IVSTFSRKPVFGYLGMVYAMTSIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIVVPTG 109

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLF V  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 110 IKIFSWIATMWGGSIQYKTPMLFVVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 169

Query: 121 HYVLSNGAVFASLDDFTIGWVKSL--VGHTLKL 152
           HYVLS GAVFA    F   WV  +  VGH LKL
Sbjct: 170 HYVLSMGAVFALFAGFYY-WVGKIFGVGHILKL 201

[Close]

BLAST of Cmc09g0241041 vs. TAIR 10
Match: ATMG01360.1 (cytochrome oxidase )

HSP 1 Score: 213.8 bits (543), Expect = 9.7e-56
Identity = 115/148 (77.70%), Postives = 121/148 (81.76%), Query Frame = 0


Query: 1   MVSTFSRKLVFRYLGIVYAMISIGVLGFLVWAHHMFTMGLDVDTCAYFTAAIMIIVLHTG 60
           +VSTFS K VF YLG+VYAMISIGVLGFLVWAHHMFT+GLDVDT AYFTAA MII + TG
Sbjct: 260 IVSTFSGKPVFGYLGMVYAMISIGVLGFLVWAHHMFTVGLDVDTRAYFTAATMIIAVPTG 319

Query: 61  IKIFSWIATIWGVLIQYKTPMLFAVESIFLFNIGGFTSIVLKNSGLDIALHDTYYVVAHF 120
           IKIFSWIAT+WG  IQYKTPMLFAV  IFLF IGG T IVL NSGLDIALHDTYYVVAHF
Sbjct: 320 IKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLANSGLDIALHDTYYVVAHF 379

Query: 121 HYVLSNGAVFASLDDFTIGWVKSLVGHT 149
           HYVLS GAVFA    F   WV  + G T
Sbjct: 380 HYVLSMGAVFALFAGFYY-WVGKIFGRT 406

The following BLAST results are available for this feature:

BLAST of Cmc09g0241041 vs. NCBI nr


Match Name	E-value	Identity	Description
VAI61370.1	4.2e-53	77.70	unnamed protein product [Triticum turgidum subsp. durum]	[more]
AAF77688.1	4.2e-53	78.38	cytochrome oxidase subunit 1, partial [Buxus sp. Qiu 94069]	[more]
KAG6621736.1	5.5e-53	78.15	hypothetical protein I3842_Q015000 [Carya illinoinensis]	[more]
BCT43315.1	9.4e-53	78.38	cytochrome c oxidase subunit 1 [Musella lasiocarpa]	[more]
BCT43201.1	9.4e-53	78.38	cytochrome c oxidase subunit 1 [Musa textilis] >BCT43239.1 cytochrome c oxidase ...	[more]

BLAST of Cmc09g0241041 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68540	2.1e-55	78.38	Cytochrome c oxidase subunit 1 OS=Aegilops columnaris OX=4493 GN=COX1 PE=3 SV=1	[more]
P08742	2.1e-55	78.38	Cytochrome c oxidase subunit 1 OS=Zea mays OX=4577 GN=COX1 PE=3 SV=2	[more]
P14578	2.1e-55	78.38	Cytochrome c oxidase subunit 1 OS=Oryza sativa subsp. japonica OX=39947 GN=COX1 ...	[more]
P05502	2.1e-55	78.38	Cytochrome c oxidase subunit 1 OS=Sorghum bicolor OX=4558 GN=COX1 PE=3 SV=2	[more]
P68539	2.1e-55	78.38	Cytochrome c oxidase subunit 1 OS=Triticum aestivum OX=4565 GN=COX1 PE=3 SV=1	[more]

BLAST of Cmc09g0241041 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A446WML9	2.1e-53	77.70	Cytochrome c oxidase subunit 1 OS=Triticum turgidum subsp. durum OX=4567 GN=TRIT...	[more]
Q9MH10	2.1e-53	78.38	Cytochrome c oxidase subunit 1 (Fragment) OS=Buxus sp. Qiu 94069 OX=105810 GN=Co...	[more]
A0A3B6U780	2.7e-53	79.05	Cytochrome c oxidase subunit 1 OS=Triticum aestivum OX=4565 PE=3 SV=1	[more]
Q94RS3	4.6e-53	78.38	Cytochrome c oxidase subunit 1 (Fragment) OS=Lachnocaulon anceps OX=76467 PE=3 S...	[more]
A0A453N895	4.6e-53	77.78	Cytochrome c oxidase subunit 1 OS=Aegilops tauschii subsp. strangulata OX=200361...	[more]

BLAST of Cmc09g0241041 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG01360.1	9.7e-56	77.70	cytochrome oxidase	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000883	Cytochrome c oxidase subunit I	PRINTS	PR01165	CYCOXIDASEI	coord: 48..69 score: 65.39 coord: 24..39 score: 77.93 coord: 83..101 score: 51.51 coord: 111..130 score: 88.02
IPR000883	Cytochrome c oxidase subunit I	PFAM	PF00115	COX1	coord: 2..132 e-value: 1.7E-34 score: 119.5
IPR000883	Cytochrome c oxidase subunit I	PANTHER	PTHR10422	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..147
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	GENE3D	1.20.210.10		coord: 1..149 e-value: 4.1E-48 score: 166.0
IPR036927	Cytochrome c oxidase-like, subunit I superfamily	SUPERFAMILY	81442	Cytochrome c oxidase subunit I-like	coord: 2..133
None	No IPR available	PANTHER	PTHR10422:SF18	CYTOCHROME C OXIDASE SUBUNIT 1	coord: 1..147
IPR023616	Cytochrome c oxidase-like, subunit I domain	PROSITE	PS50855	COX1	coord: 1..151 score: 31.413908

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc09g0241041.1	Cmc09g0241041.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0015990	electron transport coupled proton transport
biological_process	GO:0006119	oxidative phosphorylation
biological_process	GO:0009060	aerobic respiration
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045277	respiratory chain complex IV
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004129	cytochrome-c oxidase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0046872	metal ion binding