Cmc09g0239491 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCCACACTAACAGGAATTTGTTGCTCCGTTGAACAGAAAAAACTATAACTTAACCATTCCGAAACCTTCTCTCCTCCTTCCATTTTCCTTCTCTCTTATCTCCCTCCACCAAACCCATTCCCAAAACCCTACTGTTTTCTTTTTCCCCTTTCTCTCTTCCAATTCTCCAACTCCTCGCCGTTTTCCCCACCTTCTTCTTAGTTTTTCTTCTAACTTCTTCTTACCCTCCTTGCCATTTCTGGGCTTTCGCCTTTTCTTCTTATTGGTACTTCACAACATTTAATTTGGCGTTTCAGATTCAAGCAACTGGGTCTGCATTGTTTCCTAAACCTTCTCCAGAATTTTATGTGAGTTTCTTTCATTAATCATCACCATTACTGTTTTTCCTCTGCGTTAATTATTCGTGTTTGAAATCGTTGTTTTAAGCAGTTTGCATAATTCTCTTATCCGCTTGTTTTGTGATAATGCGTATTTGCTCCTAAACTCATTTGTTCTTTTTTATTTTTATTTTTTGTGAAAAGTATGGATGAACAATTAAATTAATCGAAATCTATTATTTTAAGCTTTGGGGTTTAATCGCATGCCAAATTATATCAAGAATGTTGTTATTAGGATCATTTCTGAATTTGTAGCTGTGGGGTGGATGATAAGTCAGCTAGAGAGTTTCAACGTTGTGATCGATTGATTGATTTAGCTGTGTTTCAACTGAATCTTCCATTGATTTTGGAAACAGACGCTATGGATAGTACACAGAGTTTTAAGCAATCCAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAGTTCTTCATGTACCTCAGATTTGTCACAAGACTCCGCGGTTAGCAGCATTTTTCAGAGTGATCCTCCTGTTCTTCAATCAAAATCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACGGTGGAGAATCAATCTGCGGGTTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGAGCGCTTGGAAACCACGATCCAAATCGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTATGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAATAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATTCATCCCAGACTTTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGACAGTAAATCTGAAATTACGGTGAAGACATCTGCCGATCCAGTGACGTCGGCGTCAACTGCACCTCCGATTTCACCCACATCAAGTCACAATGTAGCAGATCACAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGACAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTGTAAGCAATCCTATATCATATGTCTGTTTTGGAGATGTTTTCATTTTGAGCTTGGAATCTAAAACATTATGGCTATAAATTGTGTCTTCTTTTATCAGATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGCAACATCACACCAACAGCCATCAAAGCTGCAATCGAAGAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCTGCCTCATCTCCAGCCACGAATTCAGGCTCAGGCTGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGACGAAATCTCTGCTTGTGTTGACTATACTACTTGTTCTACTCACATCACCACAGAGAAAAGCTACAGAAGATGGTAACTTTACACTCTAGCTAATTAGTTCTCTCTAAATGAAAAGAAAAACAGAGAAGAAGAACAAGAGCTCCAATATATTGACCTCCTTAAGAGTTTATAGCAGAAGAATTAGTTATTATTATTGTAACAATCCTTTTTTTTTTCTTTCGAATTCTCCATTCTCTAGATAACATAAGGCTGAATGAAATCGATTGTTTGATTTATTCTCTCTGGCTTTGATTAAAACTACTACTTTATTATACCGCAAACTTATCTTCATCAAAACCTTGACTTGTTAACAGCTGTTTATGTATATTGATAAACTTTTCATCTTATGACTTGTTAACCGATTCTTTTTATGATTAATAAC GCCACACTAACAGGAATTTGTTGCTCCGTTGAACAGAAAAAACTATAACTTAACCATTCCGAAACCTTCTCTCCTCCTTCCATTTTCCTTCTCTCTTATCTCCCTCCACCAAACCCATTCCCAAAACCCTACTGTTTTCTTTTTCCCCTTTCTCTCTTCCAATTCTCCAACTCCTCGCCGTTTTCCCCACCTTCTTCTTAGTTTTTCTTCTAACTTCTTCTTACCCTCCTTGCCATTTCTGGGCTTTCGCCTTTTCTTCTTATTGGTACTTCACAACATTTAATTTGGCGTTTCAGATTCAAGCAACTGGGTCTGCATTGTTTCCTAAACCTTCTCCAGAATTTTATACGCTATGGATAGTACACAGAGTTTTAAGCAATCCAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAGTTCTTCATGTACCTCAGATTTGTCACAAGACTCCGCGGTTAGCAGCATTTTTCAGAGTGATCCTCCTGTTCTTCAATCAAAATCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACGGTGGAGAATCAATCTGCGGGTTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGAGCGCTTGGAAACCACGATCCAAATCGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTATGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAATAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATTCATCCCAGACTTTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGACAGTAAATCTGAAATTACGGTGAAGACATCTGCCGATCCAGTGACGTCGGCGTCAACTGCACCTCCGATTTCACCCACATCAAGTCACAATGTAGCAGATCACAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGACAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGCAACATCACACCAACAGCCATCAAAGCTGCAATCGAAGAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCTGCCTCATCTCCAGCCACGAATTCAGGCTCAGGCTGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGACGAAATCTCTGCTTGTGTTGACTATACTACTTGTTCTACTCACATCACCACAGAGAAAAGCTACAGAAGATGGTAACTTTACACTCTAGCTAATTAGTTCTCTCTAAATGAAAAGAAAAACAGAGAAGAAGAACAAGAGCTCCAATATATTGACCTCCTTAAGAGTTTATAGCAGAAGAATTAGTTATTATTATTGTAACAATCCTTTTTTTTTTCTTTCGAATTCTCCATTCTCTAGATAACATAAGGCTGAATGAAATCGATTGTTTGATTTATTCTCTCTGGCTTTGATTAAAACTACTACTTTATTATACCGCAAACTTATCTTCATCAAAACCTTGACTTGTTAACAGCTGTTTATGTATATTGATAAACTTTTCATCTTATGACTTGTTAACCGATTCTTTTTATGATTAATAAC ATGGATAGTACACAGAGTTTTAAGCAATCCAAGGGACAATTAGATCAGGTGAACCACAAAGAAACAGATGCTATCTCTGATCGAAGCAACTCGAGTTCTTCATGTACCTCAGATTTGTCACAAGACTCCGCGGTTAGCAGCATTTTTCAGAGTGATCCTCCTGTTCTTCAATCAAAATCAGATGTTGCCGAGCCTCTGGGAGCTGTGCAAACGGTGGAGAATCAATCTGCGGGTTCTCTTAGTAGAATCCAGAGTTCTTCTAGGGGTTCTTCTCATATTCGGTTATCTGGAGCGCTTGGAAACCACGATCCAAATCGAATACCGGTGTCCATCTTCTCTGGTAGACCATCAAACCCTATGGAATGGAGCACTGCTTCAAACGAATCATTGTTCAGTATTCATGTGGGAAACAATAGCTTTTCAAGGGAACATTTCAATTTTTTTAAGTCTGGAGAATTGTTGATGAACCCCAATTCATCCCAGACTTTATCCAACCTGCCCCCTTTTGTTGAACCATTAAGAGCTGACAGTAAATCTGAAATTACGGTGAAGACATCTGCCGATCCAGTGACGTCGGCGTCAACTGCACCTCCGATTTCACCCACATCAAGTCACAATGTAGCAGATCACAAAAAAGAAGTCACGACAACTATGGATGAGCTTCGAGGTCGACAGAGCGTATCAAACGACAGCATGAATAGCTCTCGTTCATTTCAGTTCCCACTATTGGCAAGTGAAGGTGCAACACCAAAAACAACTAGCTCTGTTTCAACAGACTCCGGTGCAACATCACACCAACAGCCATCAAAGCTGCAATCGAAGAAGCGGCAATCAGCAAAGCATCAATTGCCAGAACTTCAGTCTTCATCTCAGGCTGCCTCATCTCCAGCCACGAATTCAGGCTCAGGCTGGTTTTCCTGTCTCTCTTGGTGTCGATGCCGATGA MDSTQSFKQSKGQLDQVNHKETDAISDRSNSSSSCTSDLSQDSAVSSIFQSDPPVLQSKSDVAEPLGAVQTVENQSAGSLSRIQSSSRGSSHIRLSGALGNHDPNRIPVSIFSGRPSNPMEWSTASNESLFSIHVGNNSFSREHFNFFKSGELLMNPNSSQTLSNLPPFVEPLRADSKSEITVKTSADPVTSASTAPPISPTSSHNVADHKKEVTTTMDELRGRQSVSNDSMNSSRSFQFPLLASEGATPKTTSSVSTDSGATSHQQPSKLQSKKRQSAKHQLPELQSSSQAASSPATNSGSGWFSCLSWCRCR Homology
BLAST of Cmc09g0239491 vs. NCBI nr
Match: KAA0039436.1 (uncharacterized protein E6C27_scaffold64G002430 [Cucumis melo var. makuwa] >TYK00625.1 uncharacterized protein E5676_scaffold169G002450 [Cucumis melo var. makuwa]) HSP 1 Score: 582.4 bits (1500), Expect = 2.3e-162 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of Cmc09g0239491 vs. NCBI nr
Match: XP_008459383.1 (PREDICTED: uncharacterized protein LOC103498531 [Cucumis melo] >XP_016902402.1 PREDICTED: uncharacterized protein LOC103498531 [Cucumis melo]) HSP 1 Score: 582.4 bits (1500), Expect = 2.3e-162 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of Cmc09g0239491 vs. NCBI nr
Match: XP_011656011.1 (uncharacterized protein LOC105435613 [Cucumis sativus] >XP_031742309.1 uncharacterized protein LOC105435613 [Cucumis sativus] >KAE8648941.1 hypothetical protein Csa_007740 [Cucumis sativus]) HSP 1 Score: 538.9 bits (1387), Expect = 2.9e-149 Identity = 293/315 (93.02%), Postives = 302/315 (95.87%), Query Frame = 0
BLAST of Cmc09g0239491 vs. NCBI nr
Match: XP_038890702.1 (uncharacterized protein LOC120080199 [Benincasa hispida]) HSP 1 Score: 462.6 bits (1189), Expect = 2.7e-126 Identity = 265/317 (83.60%), Postives = 277/317 (87.38%), Query Frame = 0
BLAST of Cmc09g0239491 vs. NCBI nr
Match: XP_022133869.1 (uncharacterized protein LOC111006315 [Momordica charantia] >XP_022133870.1 uncharacterized protein LOC111006315 [Momordica charantia] >XP_022133871.1 uncharacterized protein LOC111006315 [Momordica charantia]) HSP 1 Score: 343.6 bits (880), Expect = 1.8e-90 Identity = 210/316 (66.46%), Postives = 236/316 (74.68%), Query Frame = 0
BLAST of Cmc09g0239491 vs. ExPASy TrEMBL
Match: A0A1S4E2F1 (uncharacterized protein LOC103498531 OS=Cucumis melo OX=3656 GN=LOC103498531 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of Cmc09g0239491 vs. ExPASy TrEMBL
Match: A0A5A7TBM6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002450 PE=4 SV=1) HSP 1 Score: 582.4 bits (1500), Expect = 1.1e-162 Identity = 314/314 (100.00%), Postives = 314/314 (100.00%), Query Frame = 0
BLAST of Cmc09g0239491 vs. ExPASy TrEMBL
Match: A0A0A0KXK8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G639470 PE=4 SV=1) HSP 1 Score: 538.9 bits (1387), Expect = 1.4e-149 Identity = 293/315 (93.02%), Postives = 302/315 (95.87%), Query Frame = 0
BLAST of Cmc09g0239491 vs. ExPASy TrEMBL
Match: A0A6J1BWD8 (uncharacterized protein LOC111006315 OS=Momordica charantia OX=3673 GN=LOC111006315 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 8.8e-91 Identity = 210/316 (66.46%), Postives = 236/316 (74.68%), Query Frame = 0
BLAST of Cmc09g0239491 vs. ExPASy TrEMBL
Match: A0A6J1K2X5 (uncharacterized protein LOC111489581 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489581 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 1.1e-90 Identity = 216/320 (67.50%), Postives = 240/320 (75.00%), Query Frame = 0
BLAST of Cmc09g0239491 vs. TAIR 10
Match: AT2G03630.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 87 Blast hits to 87 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 59.7 bits (143), Expect = 4.9e-09 Identity = 59/153 (38.56%), Postives = 73/153 (47.71%), Query Frame = 0
BLAST of Cmc09g0239491 vs. TAIR 10
Match: AT2G03630.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits to 126 proteins in 28 species: Archae - 0; Bacteria - 6; Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink). ) HSP 1 Score: 58.5 bits (140), Expect = 1.1e-08 Identity = 80/248 (32.26%), Postives = 103/248 (41.53%), Query Frame = 0
BLAST of Cmc09g0239491 vs. TAIR 10
Match: AT3G02125.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species: Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 7.8e-07 Identity = 96/316 (30.38%), Postives = 129/316 (40.82%), Query Frame = 0
BLAST of Cmc09g0239491 vs. TAIR 10
Match: AT5G39200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G39140.1); Has 65 Blast hits to 65 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.8 bits (120), Expect = 2.3e-06 Identity = 67/229 (29.26%), Postives = 94/229 (41.05%), Query Frame = 0
BLAST of Cmc09g0239491 vs. TAIR 10
Match: AT1G74220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G03630.1); Has 383 Blast hits to 347 proteins in 86 species: Archae - 0; Bacteria - 17; Metazoa - 87; Fungi - 65; Plants - 76; Viruses - 2; Other Eukaryotes - 136 (source: NCBI BLink). ) HSP 1 Score: 43.5 bits (101), Expect = 3.6e-04 Identity = 81/328 (24.70%), Postives = 126/328 (38.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
|