Cmc09g0238891 (gene) Melon (Charmono) v1.1

Overview
NameCmc09g0238891
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr09: 1310305 .. 1312516 (+)
RNA-Seq ExpressionCmc09g0238891
SyntenyCmc09g0238891
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGATAAAACCAACAACTCAAACTCTAACCCTAAAATATGAACCCTAGCCATAAGTTGTCCCAACTACTCAGTCACCCAAGTTTATTATGTTTAAACCATTATTTCCAACTCTCTATCGGAAGTCCTAAGTCTTCGGCTTATGTCGTTTCTCTTTAAAACTTTCTAATATATCCCTCACCTCCCACATTGTCTATTTTCTCATTTAAATTTACAATCAATTGAATAATCTTGTTGATTATTTTTTAGAATATAACACTCAATAGTAGTAATTATTTATAACAATAATGATGATGATAAAAAGTTGAACATATTTTCTAAACATAAAATTTAAAAAGAAAAAAGCAACCACAAACAAAAGGGAACTATTTTCTTAAAGACAGTAGTGCCAAAATGGGCAGAAAAATTACATGGGTACTAGGTCATAGGTGAATATCTATTTTTGACATGGATATCCCTCGTGATTACAGCTACAATTAATCAGCAGTGCAACGTTTTGGTAGTCTTGCACATCCACATTGTCTGTCTTTACATTATGATGTATGACAATTATAGCAATGGACATCAGCTAGGGGATCAACATTCAAGTTTTGATACATTTGCTGAAGATTATGATTAACAACTTGAGCGACATTTTCATCTCTAGCTAACTATGATTAAGATCAACATCTTGAGTGACATCTTCATCTGCAGCATGGTTAAAATGATCAACAACTTGAGCGGCGTCTTCATCCTCAGTTTAGTTCAAATCATCACCTTACCATCAACAATTACAGTGGCAATATAAAAAGTTGTTGAATCGGGTGATGTTGTAGTCATCGCAACAGGCATCGACGGTGTTAGGCATAGTAACAATCACATTATTGGAAGCCTCCATGGCCAACCCGACAGCAGTATCAGTTTCCACATATGATGCAGAAGCATTAGCTAGTTGATTGTTGTTTGCAGAAGATACTACTACAACATGAACAAAGGCACTTGTGGCTTGAGCAATTGCTATACCCAATCACAAATTAGCCCTAAGGCTTAGGAATGAGATTAGAGAAAAAGAAGTGATTAGGAGAAGGGAGAAGAGCTAGCTTTGGGAGGAAAGGAGAAGAGCATGAAATGGGAGTGAAGTGAGGAAGAAATTAAGATAGATTAAATAAATGATTTGATTGCCCATGGAAATGGGCAATCATGCTCTTAATTTCTTCAAAGACTTGCATGGCCATAGAAATGGGTTGACGGACTTTTCTAATGAATACCCTTCTTGTAGTACCGGTAAAAATATATGAAGTATTGGTACTACAAGAAGGTTGCTCGTGAAAAAGTTATCCATAAATGGATTGATGAAGAAGCAAAGCCAATTAAAGAAAGACGTATGGCCATAGAAATGGGCAATCAAATCATATATCTATTTAATACATCTTAATTTCTTCCTTCACTTCACTGTCAATTAATTCATGCTCTTCTTCTTCTTCACTACCAAAGCTTCTCCATTCTCTGGTTCACTTCTTTTTCTCATCCCATTTCTAAACGGCCTCATGGCTAATTTGCAATTGGGTATAGCAATTGTTCAAGCCACAAGTGCCCTTATGCATGTTGTAGCAGTGTATCTAAACAACAATCAACTAGCTAATATTTTTGCATCATACGTGGAAGTTGATGCTAGTGTCGAGCTTTGCCACCGAGGCTACCAACAATGTGATTGTTGCTATGCCATACCTCTCTTGCATTGGCTCAACATCACTCGCTAGTTACAGCAGCTCTTAACGTGCTAACGTCACTCAAGCTGATGATCTGAATCAAGCTGAGGATGAAGATGTTGCTCAAGCTATTGATCTTAACCGAGCTGTAGATGAAGATGTCGCTCAAGGTGTTGATCTTAATCAAGTTGGAGATGAAAATGTCGTCGCTCAAGCTGTTATAATCATAATTTTTAGCAGATGTATCAAAACTTGAATGTTGATCCCTAATTGATATTCAATGTTGACATGTTGTAATTGTCATAAATCAAAATGAAAAGATCGACAATGTTGACATGTGGTACCACTGATTGCAGCTATAATCAGGAGGGATTTGATTGCCCATTTCTATGGCCATATATACTAAGTCTTTCTTTGGGCTTTGTTTCTTTATCGATCCATTTATGAATAACACGCATGCTCTCTTTTCATTGGATATATGATATTTAGGTCATTTGGTGCACACTTCTCAATGCTTGCTTCTTCC

mRNA sequence

GTGATAAAACCAACAACTCAAACTCTAACCCTAAAATATGAACCCTAGCCATAAGTTGTCCCAACTACTCAGTCACCCAAGTTTATTATGTTTAAACCATTATTTCCAACTCTCTATCGGAAGTCCTAAGTCTTCGGCTTATGTCGTTTCTCTTTAAAACTTTCTAATATATCCCTCACCTCCCACATTGTCTATTTTCTCATTTAAATTTACAATCAATTGAATAATCTTGTTGATTATTTTTTAGAATATAACACTCAATAGTAGTAATTATTTATAACAATAATGATGATGATAAAAAGTTGAACATATTTTCTAAACATAAAATTTAAAAAGAAAAAAGCAACCACAAACAAAAGGGAACTATTTTCTTAAAGACAGTAGTGCCAAAATGGGCAGAAAAATTACATGGGTACTAGGTCATAGGTGAATATCTATTTTTGACATGGATATCCCTCGTGATTACAGCTACAATTAATCAGCAGTGCAACGTTTTGGTAGTCTTGCACATCCACATTGTCTGTCTTTACATTATGATGTATGACAATTATAGCAATGGACATCAGCTAGGGGATCAACATTCAAGTTTTGATACATTTGCTGAAGATTATGATTAACAACTTGAGCGACATTTTCATCTCTAGCTAACTATGATTAAGATCAACATCTTGAGTGACATCTTCATCTGCAGCATGGTTAAAATGATCAACAACTTGAGCGGCGTCTTCATCCTCAGTTTAGTTCAAATCATCACCTTACCATCAACAATTACAGTGGCAATATAAAAAGTTGTTGAATCGGGTGATGTTGTAGTCATCGCAACAGGCATCGACGGTGTTAGGCATAGTAACAATCACATTATTGGAAGCCTCCATGGCCAACCCGACAGCAGTATCAGTTTCCACATATGATGCAGAAGCATTAGCTAGTTGATTGTTGTTTGCAGAAGATACTACTACAACATGAACAAAGGCACTTGTGGCTTGAGCAATTGCTATACCCAATCACAAATTAGCCCTAAGGCTTAGGAATGAGATTAGAGAAAAAGAAGTGATTAGGAGAAGGGAGAAGAGCTAGCTTTGGGAGGAAAGGAGAAGAGCATGAAATGGGAGTGAAGTGAGGAAGAAATTAAGATAGATTAAATAAATGATTTGATTGCCCATGGAAATGGGCAATCATGCTCTTAATTTCTTCAAAGACTTGCATGGCCATAGAAATGGGTTGACGGACTTTTCTAATGAATACCCTTCTTGTAGTACCGGTAAAAATATATGAAGTATTGGTACTACAAGAAGGTTGCTCGTGAAAAAGTTATCCATAAATGGATTGATGAAGAAGCAAAGCCAATTAAAGAAAGACGTATGGCCATAGAAATGGGCAATCAAATCATATATCTATTTAATACATCTTAATTTCTTCCTTCACTTCACTGTCAATTAATTCATGCTCTTCTTCTTCTTCACTACCAAAGCTTCTCCATTCTCTGGTTCACTTCTTTTTCTCATCCCATTTCTAAACGGCCTCATGGCTAATTTGCAATTGGGTATAGCAATTGTTCAAGCCACAAGTGCCCTTATGCATGTTGTAGCAGTGTATCTAAACAACAATCAACTAGCTAATATTTTTGCATCATACGTGGAAGTTGATGCTAGTGTCGAGCTTTGCCACCGAGGCTACCAACAATGTGATTGTTGCTATGCCATACCTCTCTTGCATTGGCTCAACATCACTCGCTAGTTACAGCAGCTCTTAACGTGCTAACGTCACTCAAGCTGATGATCTGAATCAAGCTGAGGATGAAGATGTTGCTCAAGCTATTGATCTTAACCGAGCTGTAGATGAAGATGTCGCTCAAGGTGTTGATCTTAATCAAGTTGGAGATGAAAATGTCGTCGCTCAAGCTGTTATAATCATAATTTTTAGCAGATGTATCAAAACTTGAATGTTGATCCCTAATTGATATTCAATGTTGACATGTTGTAATTGTCATAAATCAAAATGAAAAGATCGACAATGTTGACATGTGGTACCACTGATTGCAGCTATAATCAGGAGGGATTTGATTGCCCATTTCTATGGCCATATATACTAAGTCTTTCTTTGGGCTTTGTTTCTTTATCGATCCATTTATGAATAACACGCATGCTCTCTTTTCATTGGATATATGATATTTAGGTCATTTGGTGCACACTTCTCAATGCTTGCTTCTTCC

Coding sequence (CDS)

ATGCTCTTCTTCTTCTTCACTACCAAAGCTTCTCCATTCTCTGGTTCACTTCTTTTTCTCATCCCATTTCTAAACGGCCTCATGGCTAATTTGCAATTGGGTATAGCAATTGTTCAAGCCACAAGTGCCCTTATGCATGTTGTAGCAGTGTATCTAAACAACAATCAACTAGCTAATATTTTTGCATCATACGTGGAAGTTGATGCTAGTGTCGAGCTTTGCCACCGAGGCTACCAACAATGTGATTGTTGCTATGCCATACCTCTCTTGCATTGGCTCAACATCACTCGCTAG

Protein sequence

MLFFFFTTKASPFSGSLLFLIPFLNGLMANLQLGIAIVQATSALMHVVAVYLNNNQLANIFASYVEVDASVELCHRGYQQCDCCYAIPLLHWLNITR
Homology
[Close]
BLAST of Cmc09g0238891 vs. NCBI nr
Match: KAA0039386.1 (hypothetical protein E6C27_scaffold64G001890 [Cucumis melo var. makuwa] >TYK00574.1 hypothetical protein E5676_scaffold169G001900 [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 4.8e-34
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0 

Query: 1  MLFFFFTTKASPFSGSLLFLIPFLNGLMANLQLGIAIVQATSALMHVVAVYLNNNQLANI 60
          MLFFFFTTKASPFSGSLLFLIPFLNGLMANLQLGIAIVQATSALMHVVAVYLNNNQLANI
Sbjct: 1  MLFFFFTTKASPFSGSLLFLIPFLNGLMANLQLGIAIVQATSALMHVVAVYLNNNQLANI 60

Query: 61 FASYVEVDASVELCHRGYQQCD 83
          FASYVEVDASVELCHRGYQQ D
Sbjct: 61 FASYVEVDASVELCHRGYQQSD 82

[Close]
BLAST of Cmc09g0238891 vs. NCBI nr
Match: KAA0039384.1 (hypothetical protein E6C27_scaffold64G001870 [Cucumis melo var. makuwa] >TYK00572.1 hypothetical protein E5676_scaffold169G001880 [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-04
Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 28 MANLQLGIAIVQATSALMHVVAVY--LNNNQLANIFASYVEVDASVEL 74
          MANLQLGIAI QAT+ALMH VA    +NNNQLA+ F S VE DAS  L
Sbjct: 1  MANLQLGIAIAQATNALMHAVAAVSSVNNNQLASAFESSVEADASAAL 48

[Close]
BLAST of Cmc09g0238891 vs. ExPASy TrEMBL
Match: A0A5D3BMS9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001900 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.3e-34
Identity = 81/82 (98.78%), Postives = 81/82 (98.78%), Query Frame = 0 

Query: 1  MLFFFFTTKASPFSGSLLFLIPFLNGLMANLQLGIAIVQATSALMHVVAVYLNNNQLANI 60
          MLFFFFTTKASPFSGSLLFLIPFLNGLMANLQLGIAIVQATSALMHVVAVYLNNNQLANI
Sbjct: 1  MLFFFFTTKASPFSGSLLFLIPFLNGLMANLQLGIAIVQATSALMHVVAVYLNNNQLANI 60

Query: 61 FASYVEVDASVELCHRGYQQCD 83
          FASYVEVDASVELCHRGYQQ D
Sbjct: 61 FASYVEVDASVELCHRGYQQSD 82

[Close]
BLAST of Cmc09g0238891 vs. ExPASy TrEMBL
Match: A0A5A7T7D4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001880 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.6e-05
Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = 0 

Query: 28 MANLQLGIAIVQATSALMHVVAVY--LNNNQLANIFASYVEVDASVEL 74
          MANLQLGIAI QAT+ALMH VA    +NNNQLA+ F S VE DAS  L
Sbjct: 1  MANLQLGIAIAQATNALMHAVAAVSSVNNNQLASAFESSVEADASAAL 48

The following BLAST results are available for this feature:
BLAST of Cmc09g0238891 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0039386.14.8e-3498.78hypothetical protein E6C27_scaffold64G001890 [Cucumis melo var. makuwa] >TYK0057... [more]
KAA0039384.11.4e-0468.75hypothetical protein E6C27_scaffold64G001870 [Cucumis melo var. makuwa] >TYK0057... [more]
BLAST of Cmc09g0238891 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc09g0238891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BMS92.3e-3498.78Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7T7D46.6e-0568.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of Cmc09g0238891 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc09g0238891.1Cmc09g0238891.1mRNA