Cmc08g0236441 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0236441
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr08: 32821701 .. 32822894 (+)
RNA-Seq Expression	Cmc08g0236441
Synteny	Cmc08g0236441

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGAAACCTGTTGGCAAAAAACAGAATTATATTTGAGTTGCCCAAGGGATTACCACCGAAGAGAGCAGTGGACCATCGAATACTAATTCCGGAAGGACAAAACCCAATCAATGTTCGGCCCTACAAATATGGATACATACAAAAATGGGAGATAGAAAGATTGGTATCAGAAATGCTTCAAGCGGAAATTATCAGACCCAGCCGAAGCCCATACTCCAGCCCAGTTTTATTGGTAAAAAAAAAAGACGGAGGGTGGCGATTCTGTGTTGATTATCGCAAGCTGAATCAGGTTACTATCGCCGATAAGTTTCCCATCCCCGTCATAGAAGAACTGTTAGATGAGCTCCACGGAGCGGAAGTCTTTTCAAAATTGGATCTACGCTCCGGTTACCATCAAATTCGGATGAAGGAGGAAGACATCGAAAAAACGGCTTTTCGCACCCATGAGGGACATTACGAGTTCTTGGTAATGCCATTCGGGTTGACCAACGCGCCAGCCACTTTTCAATCATTAATGAATCAGATTTTTCGGCCATTCTTGCGGAGATTCGTTCTGGTATTTTTTGACGACATACTAATTTACAGTAAGAATATTACGGAACATGAGAAGCACCTGGGAGTAGTTTTTAATGTGATGAAGGACAATCAGTTATTTGCAAATGAGAAGAAGTGCATGATCGGGCATTCAAGAATTAACTATCTGGGTCACTGGATATCAAAAAAAGGGGTAGAAGCCGATGGCGAGAAGGTGAAATCCATGGTTAATTGGCCTCAGCCCACTAGTGTCTCGGAACTAAGAGGGTTCCTTGGGTTGACGGGATACTACCAGAGGTTCGTCAAAAATTATGGAAACATTGTTGCGCCACTGACCAAATTACTACAGAAGAATGGGTTCCATTGGGGTGAAGACGCTACAGCAGCCTTTGAATCGTTAAAACAAGCGATGATATCAGTACCGGTTTTGGCCCTTCCAGATTTCTCATTACCATTCATCATTGAAACCGATGCTTCAGGGACAGGTTTGGGGGCTGTTCTTTCTCAAAACAACAGACCGATAGCCTATTTTAGTCAGAAATTATCTCCTCGAGCCCAAGCAAAATCCATTTATGAAAGGGAGTTAATGGCGGTAGTGATGGCTGTACAGAAATGGCGCCATTACGTGCTAGGCAGAAAATTCACGATTATTTAA

mRNA sequence

ATGATCAGAAACCTGTTGGCAAAAAACAGAATTATATTTGAGTTGCCCAAGGGATTACCACCGAAGAGAGCAGTGGACCATCGAATACTAATTCCGGAAGGACAAAACCCAATCAATGTTCGGCCCTACAAATATGGATACATACAAAAATGGGAGATAGAAAGATTGGTATCAGAAATGCTTCAAGCGGAAATTATCAGACCCAGCCGAAGCCCATACTCCAGCCCAGTTTTATTGGTAAAAAAAAAAGACGGAGGGTGGCGATTCTGTGTTGATTATCGCAAGCTGAATCAGGTTACTATCGCCGATAAGTTTCCCATCCCCGTCATAGAAGAACTGTTAGATGAGCTCCACGGAGCGGAAGTCTTTTCAAAATTGGATCTACGCTCCGGTTACCATCAAATTCGGATGAAGGAGGAAGACATCGAAAAAACGGCTTTTCGCACCCATGAGGGACATTACGAGTTCTTGGTAATGCCATTCGGGTTGACCAACGCGCCAGCCACTTTTCAATCATTAATGAATCAGATTTTTCGGCCATTCTTGCGGAGATTCGTTCTGGTATTTTTTGACGACATACTAATTTACAGTAAGAATATTACGGAACATGAGAAGCACCTGGGAGTAGTTTTTAATGTGATGAAGGACAATCAGTTATTTGCAAATGAGAAGAAGTGCATGATCGGGCATTCAAGAATTAACTATCTGGGTCACTGGATATCAAAAAAAGGGGTAGAAGCCGATGGCGAGAAGGTGAAATCCATGGTTAATTGGCCTCAGCCCACTAGTGTCTCGGAACTAAGAGGGTTCCTTGGGTTGACGGGATACTACCAGAGGTTCGTCAAAAATTATGGAAACATTGTTGCGCCACTGACCAAATTACTACAGAAGAATGGGTTCCATTGGGGTGAAGACGCTACAGCAGCCTTTGAATCGTTAAAACAAGCGATGATATCAGTACCGGTTTTGGCCCTTCCAGATTTCTCATTACCATTCATCATTGAAACCGATGCTTCAGGGACAGGTTTGGGGGCTGTTCTTTCTCAAAACAACAGACCGATAGCCTATTTTAGTCAGAAATTATCTCCTCGAGCCCAAGCAAAATCCATTTATGAAAGGGAGTTAATGGCGGTAGTGATGGCTGTACAGAAATGGCGCCATTACGTGCTAGGCAGAAAATTCACGATTATTTAA

Coding sequence (CDS)

ATGATCAGAAACCTGTTGGCAAAAAACAGAATTATATTTGAGTTGCCCAAGGGATTACCACCGAAGAGAGCAGTGGACCATCGAATACTAATTCCGGAAGGACAAAACCCAATCAATGTTCGGCCCTACAAATATGGATACATACAAAAATGGGAGATAGAAAGATTGGTATCAGAAATGCTTCAAGCGGAAATTATCAGACCCAGCCGAAGCCCATACTCCAGCCCAGTTTTATTGGTAAAAAAAAAAGACGGAGGGTGGCGATTCTGTGTTGATTATCGCAAGCTGAATCAGGTTACTATCGCCGATAAGTTTCCCATCCCCGTCATAGAAGAACTGTTAGATGAGCTCCACGGAGCGGAAGTCTTTTCAAAATTGGATCTACGCTCCGGTTACCATCAAATTCGGATGAAGGAGGAAGACATCGAAAAAACGGCTTTTCGCACCCATGAGGGACATTACGAGTTCTTGGTAATGCCATTCGGGTTGACCAACGCGCCAGCCACTTTTCAATCATTAATGAATCAGATTTTTCGGCCATTCTTGCGGAGATTCGTTCTGGTATTTTTTGACGACATACTAATTTACAGTAAGAATATTACGGAACATGAGAAGCACCTGGGAGTAGTTTTTAATGTGATGAAGGACAATCAGTTATTTGCAAATGAGAAGAAGTGCATGATCGGGCATTCAAGAATTAACTATCTGGGTCACTGGATATCAAAAAAAGGGGTAGAAGCCGATGGCGAGAAGGTGAAATCCATGGTTAATTGGCCTCAGCCCACTAGTGTCTCGGAACTAAGAGGGTTCCTTGGGTTGACGGGATACTACCAGAGGTTCGTCAAAAATTATGGAAACATTGTTGCGCCACTGACCAAATTACTACAGAAGAATGGGTTCCATTGGGGTGAAGACGCTACAGCAGCCTTTGAATCGTTAAAACAAGCGATGATATCAGTACCGGTTTTGGCCCTTCCAGATTTCTCATTACCATTCATCATTGAAACCGATGCTTCAGGGACAGGTTTGGGGGCTGTTCTTTCTCAAAACAACAGACCGATAGCCTATTTTAGTCAGAAATTATCTCCTCGAGCCCAAGCAAAATCCATTTATGAAAGGGAGTTAATGGCGGTAGTGATGGCTGTACAGAAATGGCGCCATTACGTGCTAGGCAGAAAATTCACGATTATTTAA

Protein sequence

MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEMLQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGAEVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWISKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGFHWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQKLSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKFTII

Homology

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BLAST of Cmc08g0236441 vs. NCBI nr
Match: KAA0062448.1 (disease resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 700.3 bits (1806), Expect = 9.7e-198
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM
Sbjct: 414 MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 473

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA
Sbjct: 474 LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 533

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
           EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP
Sbjct: 534 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 593

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI
Sbjct: 594 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 653

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF
Sbjct: 654 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 713

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT 342
           HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT
Sbjct: 714 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT 754

[Close]

BLAST of Cmc08g0236441 vs. NCBI nr
Match: TYK27437.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 700.3 bits (1806), Expect = 9.7e-198
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM
Sbjct: 565 MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 624

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA
Sbjct: 625 LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 684

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
           EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP
Sbjct: 685 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 744

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI
Sbjct: 745 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 804

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF
Sbjct: 805 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 864

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT 342
           HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT
Sbjct: 865 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT 905

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BLAST of Cmc08g0236441 vs. NCBI nr
Match: KAE8637561.1 (hypothetical protein CSA_017659 [Cucumis sativus])

HSP 1 Score: 649.8 bits (1675), Expect = 1.5e-182
Identity = 313/397 (78.84%), Postives = 351/397 (88.41%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MI+NLL +   IFE PK LPPKR +DHRIL+   Q PINVRPYKYGY+QK EIE+LV EM
Sbjct: 179 MIKNLLQQYANIFEDPKKLPPKREIDHRILVLPDQRPINVRPYKYGYVQKEEIEKLVVEM 238

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQA +IRPS SPYSSPVLLVKKKDGGWRFCVDYRKLNQVTI+DKFPIPVIEELLDELHGA
Sbjct: 239 LQAGVIRPSHSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTISDKFPIPVIEELLDELHGA 298

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
            VFSKLD++S YHQIRM+EED+EKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQ+F+P
Sbjct: 299 TVFSKLDMKSDYHQIRMQEEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKP 358

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRR VLVFFDDIL+YSK+I+EHEKHLG+VF V++DN LFAN+KKC+I HS+I YLGH I
Sbjct: 359 FLRRCVLVFFDDILVYSKDISEHEKHLGMVFAVLRDNHLFANKKKCVIAHSKIQYLGHII 418

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           S KGV+AD EK+K MV WPQP  V+ LRGFLGL+GYY+RFVK YG I APLT+LLQKN F
Sbjct: 419 SSKGVQADEEKIKDMVKWPQPKDVTGLRGFLGLSGYYRRFVKGYGEIAAPLTRLLQKNSF 478

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQK 360
            W E AT AFE LK AM ++PVLALP++ LPF+IETDASGTGLGAVLSQN  PIA+FSQK
Sbjct: 479 VWDEQATVAFEKLKTAMTTIPVLALPNWDLPFLIETDASGTGLGAVLSQNGHPIAFFSQK 538

Query: 361 LSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKFTII 398
           LS RAQAKSIYERELM VV++VQKWRHY+LGRKFTII
Sbjct: 539 LSIRAQAKSIYERELMVVVLSVQKWRHYLLGRKFTII 575

[Close]

BLAST of Cmc08g0236441 vs. NCBI nr
Match: KGN62557.2 (hypothetical protein Csa_018739 [Cucumis sativus])

HSP 1 Score: 649.0 bits (1673), Expect = 2.6e-182
Identity = 314/397 (79.09%), Postives = 350/397 (88.16%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MI+ LL +   +FE PKGLPPKR  DHRIL+  GQ PINVRPYKYG+ QK EIE+L+SEM
Sbjct: 27  MIQVLLQQYTDLFEEPKGLPPKRECDHRILLVTGQKPINVRPYKYGHTQKEEIEKLISEM 86

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQ  IIRPS SPYSSPVLLV+KKDGGWRFCVDYRKLNQVTI+DKFPIPVIEELLDELHGA
Sbjct: 87  LQVGIIRPSHSPYSSPVLLVRKKDGGWRFCVDYRKLNQVTISDKFPIPVIEELLDELHGA 146

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
            VFSKLDL+SGYHQIRMKEED+EKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMN +F+P
Sbjct: 147 TVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNLVFKP 206

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRR VLVFFDDILIYS N+TEHEKHL +VF VM+DNQL AN+KKC+I HS+I YLGH I
Sbjct: 207 FLRRCVLVFFDDILIYSTNLTEHEKHLAMVFAVMRDNQLVANKKKCVIAHSQIQYLGHLI 266

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           S +GVEADG+K+K MVNWPQP  V+ LRGFLGLTGYY+RFVK YG +  PLTKLLQKN F
Sbjct: 267 SSRGVEADGDKIKDMVNWPQPKDVTGLRGFLGLTGYYRRFVKGYGEMAEPLTKLLQKNSF 326

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQK 360
            WGE+AT AF+ LK AM ++PVLALPD++LPFIIETDASG  LGAVLSQN  PIA+FSQK
Sbjct: 327 LWGEEATEAFDKLKLAMTTLPVLALPDWNLPFIIETDASGIALGAVLSQNGHPIAFFSQK 386

Query: 361 LSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKFTII 398
           LS RA+ KSIYERELMAVV++VQKWRHY+LGRKFTII
Sbjct: 387 LSNRAKTKSIYERELMAVVLSVQKWRHYLLGRKFTII 423

[Close]

BLAST of Cmc08g0236441 vs. NCBI nr
Match: KAA0065995.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK28942.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 644.8 bits (1662), Expect = 4.8e-181
Identity = 308/397 (77.58%), Postives = 353/397 (88.92%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MI+ LL +   +F++P  LPPKRAVDHRI    GQ PINVRPYKYG+ QK EIE+LV+EM
Sbjct: 454 MIQFLLNQYSDVFDIPTTLPPKRAVDHRIFTMPGQKPINVRPYKYGHQQKEEIEKLVTEM 513

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQ  IIRPS SP+SSPVLLVKKKDGGWRFCVDY KLN++TIADKFPIPVIEELLDELHGA
Sbjct: 514 LQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYGKLNKITIADKFPIPVIEELLDELHGA 573

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
            VFSKLDL+SGYHQIRMKEEDIEKTAFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+F+P
Sbjct: 574 TVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFMVMPFGLTNAPATFQSLMNQVFKP 633

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRR VL+FFDDIL+YS +ITEHE+HLG+VF +++DNQL+AN KKC+  HS+I YLGH I
Sbjct: 634 FLRRCVLIFFDDILVYSSDITEHERHLGMVFAILRDNQLYANRKKCVFAHSQIQYLGHII 693

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           SK GVEAD +KV+SM+ WPQP  ++ LRGFLGLTGYY+RFVK+YG I APLTKLLQKN F
Sbjct: 694 SKHGVEADQDKVRSMLQWPQPQDITGLRGFLGLTGYYRRFVKSYGEIAAPLTKLLQKNAF 753

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQK 360
            W E+AT AFESLK AM ++PVL LPD+SLPF+IETDASG+GLGAVLSQN  PIA+FSQK
Sbjct: 754 KWDENATLAFESLKLAMTTIPVLVLPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQK 813

Query: 361 LSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKFTII 398
           LSPRAQ+KSIYERELMAVV++VQKWRHY+LGR+FTII
Sbjct: 814 LSPRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTII 850

[Close]

BLAST of Cmc08g0236441 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 5.5e-87
Identity = 165/368 (44.84%), Postives = 230/368 (62.50%), Query Frame = 0


Query: 36  NPINVRPYKYGYIQKWEIERLVSEMLQAEIIRPSRSPYSSPVLLVKKKDGG-----WRFC 95
           +PI  + Y      + E+E  V EML   +IR S SPY+SP  +V KK        +R  
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 96  VDYRKLNQVTIADKFPIPVIEELLDELHGAEVFSKLDLRSGYHQIRMKEEDIEKTAFRTH 155
           +DYRKLN++TI D++PIP ++E+L +L   + F+ +DL  G+HQI M EE I KTAF T 
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 156 EGHYEFLVMPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKNITEHEKHLGVV 215
            GHYE+L MPFGL NAPATFQ  MN I RP L +  LV+ DDI+I+S ++TEH   + +V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 216 FNVMKDNQLFANEKKCMIGHSRINYLGHWISKKGVEADGEKVKSMVNWPQPTSVSELRGF 275
           F  + D  L     KC       N+LGH ++  G++ +  KVK++V++P PT   E+R F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 276 LGLTGYYQRFVKNYGNIVAPLTKLLQKNGFHWGE--DATAAFESLKQAMISVPVLALPDF 335
           LGLTGYY++F+ NY +I  P+T  L+K      +  +   AFE LK  +I  P+L LPDF
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDF 504

Query: 336 SLPFIIETDASGTGLGAVLSQNNRPIAYFSQKLSPRAQAKSIYERELMAVVMAVQKWRHY 395
              F++ TDAS   LGAVLSQN  PI++ S+ L+      S  E+EL+A+V A + +RHY
Sbjct: 505 EKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHY 564

Query: 396 VLGRKFTI 397
           +LGR+F I
Sbjct: 565 LLGRQFLI 572

[Close]

BLAST of Cmc08g0236441 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.4e-82
Identity = 154/362 (42.54%), Postives = 225/362 (62.15%), Query Frame = 0


Query: 44  KYGYIQKW--EIERLVSEMLQAEIIRPSRSPYSSPVLLVKKKDGG-----WRFCVDYRKL 103
           KY Y Q +  E+E  + +ML   IIR S SPY+SP+ +V KK        +R  +DYRKL
Sbjct: 212 KYSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKL 271

Query: 104 NQVTIADKFPIPVIEELLDELHGAEVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEF 163
           N++T+ D+ PIP ++E+L +L     F+ +DL  G+HQI M  E + KTAF T  GHYE+
Sbjct: 272 NEITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEY 331

Query: 164 LVMPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKD 223
           L MPFGL NAPATFQ  MN I RP L +  LV+ DDI+++S ++ EH + LG+VF  +  
Sbjct: 332 LRMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAK 391

Query: 224 NQLFANEKKCMIGHSRINYLGHWISKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGY 283
             L     KC        +LGH ++  G++ + EK++++  +P PT   E++ FLGLTGY
Sbjct: 392 ANLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGY 451

Query: 284 YQRFVKNYGNIVAPLTKLLQKNG--FHWGEDATAAFESLKQAMISVPVLALPDFSLPFII 343
           Y++F+ N+ +I  P+TK L+KN        +  +AF+ LK  +   P+L +PDF+  F +
Sbjct: 452 YRKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTL 511

Query: 344 ETDASGTGLGAVLSQNNRPIAYFSQKLSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKF 397
            TDAS   LGAVLSQ+  P++Y S+ L+      S  E+EL+A+V A + +RHY+LGR F
Sbjct: 512 TTDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHF 571

[Close]

BLAST of Cmc08g0236441 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 7.5e-76
Identity = 160/413 (38.74%), Postives = 242/413 (58.60%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELP-KGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSE 60
           ++ +LL +   IFE P  G+  + AV   I     Q+PI  + Y Y    + E+ER + E
Sbjct: 87  ILNSLLGEFPRIFEPPLSGMSVETAVKAEIR-TNTQDPIYAKSYPYPVNMRGEVERQIDE 146

Query: 61  MLQAEIIRPSRSPYSSPVLLVKKK-----DGGWRFCVDYRKLNQVTIADKFPIPVIEELL 120
           +LQ  IIRPS SPY+SP+ +V KK     +  +R  VD+++LN VTI D +PIP I   L
Sbjct: 147 LLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATL 206

Query: 121 DELHGAEVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLM 180
             L  A+ F+ LDL SG+HQI MKE DI KTAF T  G YEFL +PFGL NAPA FQ ++
Sbjct: 207 ASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMI 266

Query: 181 NQIFRPFLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRIN 240
           + I R  + +   V+ DDI+++S++   H K+L +V   +    L  N +K     +++ 
Sbjct: 267 DDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVE 326

Query: 241 YLGHWISKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKL 300
           +LG+ ++  G++AD +KV+++   P PTSV EL+ FLG+T YY++F+++Y  +  PLT L
Sbjct: 327 FLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNL 386

Query: 301 LQ------------KNGFHWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGTG 360
            +            K      E A  +F  LK  + S  +LA P F+ PF + TDAS   
Sbjct: 387 TRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWA 446

Query: 361 LGAVLSQN----NRPIAYFSQKLSPRAQAKSIYERELMAVVMAVQKWRHYVLG 392
           +GAVLSQ+    +RPIAY S+ L+   +  +  E+E++A++ ++   R Y+ G
Sbjct: 447 IGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYG 498

[Close]

BLAST of Cmc08g0236441 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 268.5 bits (685), Expect = 1.2e-70
Identity = 152/390 (38.97%), Postives = 220/390 (56.41%), Query Frame = 0


Query: 19  LPPKRA------VDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEMLQAEIIRPSRSP 78
           LPP+ A      V H I I  G     ++PY      + EI ++V ++L  + I PS+SP
Sbjct: 598 LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 657

Query: 79  YSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGAEVFSKLDLRSGY 138
            SSPV+LV KKDG +R CVDYR LN+ TI+D FP+P I+ LL  +  A++F+ LDL SGY
Sbjct: 658 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 717

Query: 139 HQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDD 198
           HQI M+ +D  KTAF T  G YE+ VMPFGL NAP+TF   M   FR    RFV V+ DD
Sbjct: 718 HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 777

Query: 199 ILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWISKKGVEADGEKV 258
           ILI+S++  EH KHL  V   +K+  L   +KKC        +LG+ I  + +     K 
Sbjct: 778 ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 837

Query: 259 KSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGFHWGEDATAAFES 318
            ++ ++P P +V + + FLG+  YY+RF+ N   I  P+ +L   +   W E    A E 
Sbjct: 838 AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIEK 897

Query: 319 LKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRP------IAYFSQKLSPRAQ 378
           LK A+ + PVL   +    + + TDAS  G+GAVL + +        + YFS+ L    +
Sbjct: 898 LKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQK 957

Query: 379 AKSIYERELMAVVMAVQKWRHYVLGRKFTI 397
                E EL+ ++ A+  +R+ + G+ FT+
Sbjct: 958 NYPAGELELLGIIKALHHFRYMLHGKHFTL 984

[Close]

BLAST of Cmc08g0236441 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 2.1e-70
Identity = 151/390 (38.72%), Postives = 220/390 (56.41%), Query Frame = 0


Query: 19  LPPKRA------VDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEMLQAEIIRPSRSP 78
           LPP+ A      V H I I  G     ++PY      + EI ++V ++L  + I PS+SP
Sbjct: 572 LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 631

Query: 79  YSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGAEVFSKLDLRSGY 138
            SSPV+LV KKDG +R CVDYR LN+ TI+D FP+P I+ LL  +  A++F+ LDL SGY
Sbjct: 632 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 691

Query: 139 HQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRPFLRRFVLVFFDD 198
           HQI M+ +D  KTAF T  G YE+ VMPFGL NAP+TF   M   FR    RFV V+ DD
Sbjct: 692 HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 751

Query: 199 ILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWISKKGVEADGEKV 258
           ILI+S++  EH KHL  V   +K+  L   +KKC        +LG+ I  + +     K 
Sbjct: 752 ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 811

Query: 259 KSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGFHWGEDATAAFES 318
            ++ ++P P +V + + FLG+  YY+RF+ N   I  P+ +L   +   W E    A + 
Sbjct: 812 AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIDK 871

Query: 319 LKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRP------IAYFSQKLSPRAQ 378
           LK A+ + PVL   +    + + TDAS  G+GAVL + +        + YFS+ L    +
Sbjct: 872 LKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQK 931

Query: 379 AKSIYERELMAVVMAVQKWRHYVLGRKFTI 397
                E EL+ ++ A+  +R+ + G+ FT+
Sbjct: 932 NYPAGELELLGIIKALHHFRYMLHGKHFTL 958

[Close]

BLAST of Cmc08g0236441 vs. ExPASy TrEMBL
Match: A0A5D3DUJ0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold325G001340 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.7e-198
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM
Sbjct: 565 MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 624

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA
Sbjct: 625 LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 684

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
           EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP
Sbjct: 685 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 744

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI
Sbjct: 745 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 804

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF
Sbjct: 805 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 864

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT 342
           HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT
Sbjct: 865 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT 905

[Close]

BLAST of Cmc08g0236441 vs. ExPASy TrEMBL
Match: A0A5A7V4D8 (Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold130G00260 PE=4 SV=1)

HSP 1 Score: 700.3 bits (1806), Expect = 4.7e-198
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM
Sbjct: 414 MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 473

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA
Sbjct: 474 LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 533

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
           EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP
Sbjct: 534 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 593

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI
Sbjct: 594 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 653

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF
Sbjct: 654 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 713

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT 342
           HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT
Sbjct: 714 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGT 754

[Close]

BLAST of Cmc08g0236441 vs. ExPASy TrEMBL
Match: A0A5A7VJU2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold120G00290 PE=4 SV=1)

HSP 1 Score: 644.8 bits (1662), Expect = 2.3e-181
Identity = 308/397 (77.58%), Postives = 353/397 (88.92%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MI+ LL +   +F++P  LPPKRAVDHRI    GQ PINVRPYKYG+ QK EIE+LV+EM
Sbjct: 454 MIQFLLNQYSDVFDIPTTLPPKRAVDHRIFTMPGQKPINVRPYKYGHQQKEEIEKLVTEM 513

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQ  IIRPS SP+SSPVLLVKKKDGGWRFCVDY KLN++TIADKFPIPVIEELLDELHGA
Sbjct: 514 LQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYGKLNKITIADKFPIPVIEELLDELHGA 573

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
            VFSKLDL+SGYHQIRMKEEDIEKTAFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+F+P
Sbjct: 574 TVFSKLDLKSGYHQIRMKEEDIEKTAFRTHEGHYEFMVMPFGLTNAPATFQSLMNQVFKP 633

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRR VL+FFDDIL+YS +ITEHE+HLG+VF +++DNQL+AN KKC+  HS+I YLGH I
Sbjct: 634 FLRRCVLIFFDDILVYSSDITEHERHLGMVFAILRDNQLYANRKKCVFAHSQIQYLGHII 693

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           SK GVEAD +KV+SM+ WPQP  ++ LRGFLGLTGYY+RFVK+YG I APLTKLLQKN F
Sbjct: 694 SKHGVEADQDKVRSMLQWPQPQDITGLRGFLGLTGYYRRFVKSYGEIAAPLTKLLQKNAF 753

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQK 360
            W E+AT AFESLK AM ++PVL LPD+SLPF+IETDASG+GLGAVLSQN  PIA+FSQK
Sbjct: 754 KWDENATLAFESLKLAMTTIPVLVLPDWSLPFMIETDASGSGLGAVLSQNGHPIAFFSQK 813

Query: 361 LSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKFTII 398
           LSPRAQ+KSIYERELMAVV++VQKWRHY+LGR+FTII
Sbjct: 814 LSPRAQSKSIYERELMAVVLSVQKWRHYLLGRRFTII 850

[Close]

BLAST of Cmc08g0236441 vs. ExPASy TrEMBL
Match: A0A5A7UYM1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002110 PE=4 SV=1)

HSP 1 Score: 642.9 bits (1657), Expect = 8.9e-181
Identity = 309/397 (77.83%), Postives = 350/397 (88.16%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MIR LL + + IF  PKGLPPKR +DHRIL    Q PINVRPYKYG+IQK EIE+LV+EM
Sbjct: 561 MIRFLLQQYKDIFTTPKGLPPKRDIDHRILTLPDQKPINVRPYKYGHIQKGEIEKLVAEM 620

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQ  +IRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQ TI+DKFPIPVIEELLDEL+GA
Sbjct: 621 LQDGVIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQATISDKFPIPVIEELLDELYGA 680

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
            VFSKLDL+SGYHQIRMKEED+EKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQ+F+P
Sbjct: 681 AVFSKLDLKSGYHQIRMKEEDVEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQVFKP 740

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRR VLVFFDDIL+YS++I E EKHLG+VF V++DNQL+AN KKC+  HS+I YLGH I
Sbjct: 741 FLRRCVLVFFDDILVYSRDIIEREKHLGMVFAVLRDNQLYANHKKCVFAHSKIQYLGHQI 800

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           SK GVEAD +K++SMVNWP+P+ V+ELRGFLGLTGYY+RFVK Y NI  PLTKLLQKN F
Sbjct: 801 SKAGVEADEDKIRSMVNWPRPSDVTELRGFLGLTGYYRRFVKGYSNIATPLTKLLQKNAF 860

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQK 360
            W EDA  AF  LK AM ++PVLALPD+SLPF IETDASG+GLGAVLSQ   PIA++SQK
Sbjct: 861 KWNEDAETAFVRLKVAMTTIPVLALPDWSLPFTIETDASGSGLGAVLSQRGHPIAFYSQK 920

Query: 361 LSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKFTII 398
           LS RAQAKSIYERELMAVV++VQ+WRHY+LGRKF+I+
Sbjct: 921 LSQRAQAKSIYERELMAVVLSVQRWRHYLLGRKFSIL 957

[Close]

BLAST of Cmc08g0236441 vs. ExPASy TrEMBL
Match: A0A5D3BBH7 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00100 PE=4 SV=1)

HSP 1 Score: 642.1 bits (1655), Expect = 1.5e-180
Identity = 310/397 (78.09%), Postives = 353/397 (88.92%), Query Frame = 0


Query: 1   MIRNLLAKNRIIFELPKGLPPKRAVDHRILIPEGQNPINVRPYKYGYIQKWEIERLVSEM 60
           MI+ LL +   +F+ P  LPPKR++DHRIL   GQ PINVRPYKYG+ QK EIE+LV EM
Sbjct: 559 MIQFLLHQYSDVFKSPTTLPPKRSIDHRILTLPGQKPINVRPYKYGHQQKEEIEKLVIEM 618

Query: 61  LQAEIIRPSRSPYSSPVLLVKKKDGGWRFCVDYRKLNQVTIADKFPIPVIEELLDELHGA 120
           LQ  IIRPS SP+SSPVLLVKKKDGGWRFCVDYRKLN++TIADKFPIPVIEELLDELHGA
Sbjct: 619 LQTGIIRPSHSPFSSPVLLVKKKDGGWRFCVDYRKLNKITIADKFPIPVIEELLDELHGA 678

Query: 121 EVFSKLDLRSGYHQIRMKEEDIEKTAFRTHEGHYEFLVMPFGLTNAPATFQSLMNQIFRP 180
            VFSKLDL+SGYHQIRM+EEDIEKTAFRTHEGHYEF+VMPFGLTNAPATFQSLMNQ+F+P
Sbjct: 679 TVFSKLDLKSGYHQIRMREEDIEKTAFRTHEGHYEFVVMPFGLTNAPATFQSLMNQVFKP 738

Query: 181 FLRRFVLVFFDDILIYSKNITEHEKHLGVVFNVMKDNQLFANEKKCMIGHSRINYLGHWI 240
           FLRR VLVFFDDIL+YS +ITEHEKHLG+VF  ++DNQL+AN KKC+  HS+I+YLGH I
Sbjct: 739 FLRRCVLVFFDDILVYSSDITEHEKHLGMVFATLRDNQLYANRKKCVFAHSQIHYLGHVI 798

Query: 241 SKKGVEADGEKVKSMVNWPQPTSVSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGF 300
           SK GVEAD +KVKSM+ WP+P  V+ LRGFLGLTGYY+RFVK YG I APLTKLLQKN F
Sbjct: 799 SKHGVEADQDKVKSMLQWPKPKDVTGLRGFLGLTGYYRRFVKGYGEIAAPLTKLLQKNAF 858

Query: 301 HWGEDATAAFESLKQAMISVPVLALPDFSLPFIIETDASGTGLGAVLSQNNRPIAYFSQK 360
            W E+AT AFESLK AM ++PVLALPD+SLPF+IETDASG+GLGAVLSQN+ PIA+FSQK
Sbjct: 859 KWDENATLAFESLKSAMSTIPVLALPDWSLPFMIETDASGSGLGAVLSQNSHPIAFFSQK 918

Query: 361 LSPRAQAKSIYERELMAVVMAVQKWRHYVLGRKFTII 398
           LS RAQAKSIYERELMAVV++VQKWRHY+LGR+FTI+
Sbjct: 919 LSTRAQAKSIYERELMAVVLSVQKWRHYLLGRRFTIM 955

[Close]

BLAST of Cmc08g0236441 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 158.7 bits (400), Expect = 9.8e-39
Identity = 74/130 (56.92%), Postives = 96/130 (73.85%), Query Frame = 0


Query: 206 HLGVVFNVMKDNQLFANEKKCMIGHSRINYLG--HWISKKGVEADGEKVKSMVNWPQPTS 265
           HLG+V  + + +Q +AN KKC  G  +I YLG  H IS +GV AD  K+++MV WP+P +
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 266 VSELRGFLGLTGYYQRFVKNYGNIVAPLTKLLQKNGFHWGEDATAAFESLKQAMISVPVL 325
            +ELRGFLGLTGYY+RFVKNYG IV PLT+LL+KN   W E A  AF++LK A+ ++PVL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

Query: 326 ALPDFSLPFI 334
           ALPD  LPF+
Sbjct: 123 ALPDLKLPFV 132

[Close]

BLAST of Cmc08g0236441 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 55.8 bits (133), Expect = 8.9e-08
Identity = 24/40 (60.00%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 48 IQKWEIERLVSEMLQAEIIRPSRSPYSSPVLLVKKKDGGW 88
          +++  ++  + EML+A II+PS SPYSSPVLLV+KKDGGW
Sbjct: 40 LRRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc08g0236441 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062448.1	9.7e-198	100.00	disease resistance protein [Cucumis melo var. makuwa]	[more]
TYK27437.1	9.7e-198	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAE8637561.1	1.5e-182	78.84	hypothetical protein CSA_017659 [Cucumis sativus]	[more]
KGN62557.2	2.6e-182	79.09	hypothetical protein Csa_018739 [Cucumis sativus]	[more]
KAA0065995.1	4.8e-181	77.58	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa] >TYK28942.1 Ty3/gyp...	[more]

BLAST of Cmc08g0236441 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	5.5e-87	44.84	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	2.4e-82	42.54	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	7.5e-76	38.74	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q7LHG5	1.2e-70	38.97	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	2.1e-70	38.72	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc08g0236441 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DUJ0	4.7e-198	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7V4D8	4.7e-198	100.00	Disease resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5A7VJU2	2.3e-181	77.58	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7UYM1	8.9e-181	77.83	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BBH7	1.5e-180	78.09	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]

BLAST of Cmc08g0236441 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	9.8e-39	56.92	DNA/RNA polymerases superfamily protein	[more]
ATMG00850.1	8.9e-08	60.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 80..240 e-value: 3.2E-32 score: 111.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 61..240 score: 17.772184
None	No IPR available	GENE3D	3.10.20.370		coord: 330..396 e-value: 7.1E-14 score: 53.5
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 25..165 e-value: 1.6E-88 score: 297.5
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 2..191
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 278..364
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 278..364
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 2..191
None	No IPR available	CDD	cd01647	RT_LTR	coord: 65..238 e-value: 7.75765E-98 score: 287.184
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 333..397 e-value: 1.7915E-28 score: 106.038
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 302..396 e-value: 4.8E-35 score: 119.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 105..240 e-value: 1.6E-88 score: 297.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 249..329 e-value: 3.3E-28 score: 99.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 11..396

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0236441.1	Cmc08g0236441.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010158	abaxial cell fate specification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000976	transcription cis-regulatory region binding