Cmc08g0236241 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0236241
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr08: 32618658 .. 32620568 (-)
RNA-Seq Expression	Cmc08g0236241
Synteny	Cmc08g0236241

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGTAGTCAAAGAAGGAGGGGAGGAATTGGAGATTGTGGAGGAAGAGTTTTTTGATGCCGAAACTGAGATGAAACCAGTAGAAGTGCAGACCGTGGAGAATTTAAACATTGAGCTGTCGATCAACTCAGTGGTGGGACTGAACAATCCGGGAACCATGAAAGTAAAAGGAAAGGTGGGAGAAGAAGAAGTGGTGATCTTGATCGATTGTGGGGCGACCCACAACTTCATCGCAGAGGACTTGGTGACCAGGTTAGGATTGACATTGCAGGAGACCCCAAACTATGGAGTAATCCTGGGCTCAGGAACAGCAGTCAAAGGTAAGGGGTTGTGCCGAAGTGTTGAAGTGCAATTGGATGGCTGGAAGGTGACCGATAGCTTCCTACCACTGCAGTTGGGGGGAGTTGACATGATCCTAGGAATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTGCTTACTTTTCATCACCAGGGGAGGAAGGTTGTGATACGAGGGGATCCAAGTTTGATCAAAACGAGGGTAAGTCTGAAGAATCTAGTGAAAACGTGGGGAGCTGACGATCAGGGATTCCTAGTAGAATGCAGGACATTAGAATGTGGGAAGTTGGAAGATGAACAGGATCAGGAGCAGGGAAAGGTCAACGCGGAACCAATAGCGACCCTGCTCAAGCAATTTGCCCGCGTGTTTGAATGGCCCGCGACCCTTCCACCCCAGCGCAGCATTGAACACCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTACGACCATATCGATACGCGCATCATCAGAAGGAAGAAATGGAGAGATTGGTGGATGAGATGCTATCTTCAGGGATCATACGGCCGAGTAAGAGTCCATACTCCAGCCCTGTACTGTTAGTGAGGAAGAAAGATGGGAGTTGGAGGTTCTGCGTAGATTATCGAGCGCTGAACAATGTCACGATACCAGACAAGTTTCCCATACCAGTGATAGAAGAATTATTTGACGAACTGAAGGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCTGAAGATATCGAGAAGACCGCGTTCAGAACTCACGAGGGGCACTATGAGTTCTTGGTAATGCCTTTCGGATTGACGAATGCCCCCTCTACATTCCAGGCGCTGATGAACCAAGTGTTCAAGCCATACTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATCCTAATCTACAGCCGAGGGATGGACGAACATGTTCAACACTTAGAAGTGGTGCTAGGACTACTACAAGACAGGGAGTTATATGTGAATATGGAGAAGTGCAGTTTCGCCAAACCACGGATTAGTTATTTGGGACACTTCATCTCGGAATAGGGCTTGGAAGCAGATCCAGAAAAGATAAGGGCAGTGAGTGACTGGCCAACTCCATCCAATGTGAGGGAAGTTAGAGGCTTCCTTGGCCTGACTGGCTATTACAGGCGTTTTGTTAAGAACTATGGAGCAATAGCAGCACCACTCACCCAACTACTTAAGAAAGGAGCGTACAAATGGGATGCAGAAGTCGAGGGCGCTTTTAGCAAGCTGAAAAAGGCCATGATGACTCTCCCTGTGCTCACCATGCCAGATTTCAACCTACCTTTCGAAATTGAATCAGATGCTTCGGGAGTTGGAGTGGGGGCTGTGCTGACTCAATGCCGGAAGCCAGTGGCTTATTTCAGTAAGACCCTAAGTATGCGGGACAGAGCACGACCAGTATACGAAAGAGAATTACTTGCTGTAGTTCTTGCAGTCCAAAGATGGAGACCTTACTTACTAAGGAGGAAATTCACAGTGAAAACAGACCAAAGGTCGCTTAAGTTTTTATTGGAACAACGGGTTGTGTAG

mRNA sequence

ATGCTGGTAGTCAAAGAAGGAGGGGAGGAATTGGAGATTGTGGAGGAAGAGTTTTTTGATGCCGAAACTGAGATGAAACCAGTAGAAGTGCAGACCGTGGAGAATTTAAACATTGAGCTGTCGATCAACTCAGTGGTGGGACTGAACAATCCGGGAACCATGAAAGTAAAAGGAAAGGTGGGAGAAGAAGAAGTGGTGATCTTGATCGATTGTGGGGCGACCCACAACTTCATCGCAGAGGACTTGGTGACCAGGTTAGGATTGACATTGCAGGAGACCCCAAACTATGGAGTAATCCTGGGCTCAGGAACAGCAGTCAAAGGTAAGGGGTTGTGCCGAAGTGTTGAAGTGCAATTGGATGGCTGGAAGGTGACCGATAGCTTCCTACCACTGCAGTTGGGGGGAGTTGACATGATCCTAGGAATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTGCTTACTTTTCATCACCAGGGGAGGAAGGTTGTGATACGAGGGGATCCAAGTTTGATCAAAACGAGGGTAAGTCTGAAGAATCTAGTGAAAACGTGGGGAGCTGACGATCAGGGATTCCTAGTAGAATGCAGGACATTAGAATGTGGGAAGTTGGAAGATGAACAGGATCAGGAGCAGGGAAAGGTCAACGCGGAACCAATAGCGACCCTGCTCAAGCAATTTGCCCGCGTGTTTGAATGGCCCGCGACCCTTCCACCCCAGCGCAGCATTGAACACCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTACGACCATATCGATACGCGCATCATCAGAAGGAAGAAATGGAGAGATTGGTGGATGAGATGCTATCTTCAGGGATCATACGGCCGAGTAAGAGTCCATACTCCAGCCCTGTACTGTTAGTGAGGAAGAAAGATGGGAGTTGGAGGTTCTGCGTAGATTATCGAGCGCTGAACAATGTCACGATACCAGACAAGTTTCCCATACCAGTGATAGAAGAATTATTTGACGAACTGAAGGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCTGAAGATATCGAGAAGACCGCGTTCAGAACTCACGAGGGGCACTATGAGTTCTTGGTAATGCCTTTCGGATTGACGAATGCCCCCTCTACATTCCAGGCGCTGATGAACCAAGTGTTCAAGCCATACTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATCCTAATCTACAGCCGAGGGATGGACGAACATGTTCAACACTTAGAAGTGGTGCTAGGACTACTACAAGACAGGGAGTTATATGGCTTGGAAGCAGATCCAGAAAAGATAAGGGCAGTGAGTGACTGGCCAACTCCATCCAATGTGAGGGAAGTTAGAGGCTTCCTTGGCCTGACTGGCTATTACAGGCGTTTTGTTAAGAACTATGGAGCAATAGCAGCACCACTCACCCAACTACTTAAGAAAGGAGCGTACAAATGGGATGCAGAAGTCGAGGGCGCTTTTAGCAAGCTGAAAAAGGCCATGATGACTCTCCCTGTGCTCACCATGCCAGATTTCAACCTACCTTTCGAAATTGAATCAGATGCTTCGGGAGTTGGAGTGGGGGCTGTGCTGACTCAATGCCGGAAGCCAGTGGCTTATTTCAGTAAGACCCTAAGTATGCGGGACAGAGCACGACCAGTATACGAAAGAGAATTACTTGCTGTAGTTCTTGCAGTCCAAAGATGGAGACCTTACTTACTAAGGAGGAAATTCACAGTGAAAACAGACCAAAGGTCGCTTAAGTTTTTATTGGAACAACGGGTTGTGTAG

Coding sequence (CDS)

ATGCTGGTAGTCAAAGAAGGAGGGGAGGAATTGGAGATTGTGGAGGAAGAGTTTTTTGATGCCGAAACTGAGATGAAACCAGTAGAAGTGCAGACCGTGGAGAATTTAAACATTGAGCTGTCGATCAACTCAGTGGTGGGACTGAACAATCCGGGAACCATGAAAGTAAAAGGAAAGGTGGGAGAAGAAGAAGTGGTGATCTTGATCGATTGTGGGGCGACCCACAACTTCATCGCAGAGGACTTGGTGACCAGGTTAGGATTGACATTGCAGGAGACCCCAAACTATGGAGTAATCCTGGGCTCAGGAACAGCAGTCAAAGGTAAGGGGTTGTGCCGAAGTGTTGAAGTGCAATTGGATGGCTGGAAGGTGACCGATAGCTTCCTACCACTGCAGTTGGGGGGAGTTGACATGATCCTAGGAATGCAGTGGCTTCATTCTCTTGGGGTGACCGAAGTCGACTGGAAGAGGTTAGTGCTTACTTTTCATCACCAGGGGAGGAAGGTTGTGATACGAGGGGATCCAAGTTTGATCAAAACGAGGGTAAGTCTGAAGAATCTAGTGAAAACGTGGGGAGCTGACGATCAGGGATTCCTAGTAGAATGCAGGACATTAGAATGTGGGAAGTTGGAAGATGAACAGGATCAGGAGCAGGGAAAGGTCAACGCGGAACCAATAGCGACCCTGCTCAAGCAATTTGCCCGCGTGTTTGAATGGCCCGCGACCCTTCCACCCCAGCGCAGCATTGAACACCACATATACCTGAAGAGTGGGACTGACCCAGTGAACGTACGACCATATCGATACGCGCATCATCAGAAGGAAGAAATGGAGAGATTGGTGGATGAGATGCTATCTTCAGGGATCATACGGCCGAGTAAGAGTCCATACTCCAGCCCTGTACTGTTAGTGAGGAAGAAAGATGGGAGTTGGAGGTTCTGCGTAGATTATCGAGCGCTGAACAATGTCACGATACCAGACAAGTTTCCCATACCAGTGATAGAAGAATTATTTGACGAACTGAAGGGGGCTAGCGTATTCTCCAAGTTAGACCTCAAAGCCGGATATCACCAAATTAGGATGTGCCCTGAAGATATCGAGAAGACCGCGTTCAGAACTCACGAGGGGCACTATGAGTTCTTGGTAATGCCTTTCGGATTGACGAATGCCCCCTCTACATTCCAGGCGCTGATGAACCAAGTGTTCAAGCCATACTTAAGAAGGTTTGTGCTGGTATTTTTTGATGATATCCTAATCTACAGCCGAGGGATGGACGAACATGTTCAACACTTAGAAGTGGTGCTAGGACTACTACAAGACAGGGAGTTATATGGCTTGGAAGCAGATCCAGAAAAGATAAGGGCAGTGAGTGACTGGCCAACTCCATCCAATGTGAGGGAAGTTAGAGGCTTCCTTGGCCTGACTGGCTATTACAGGCGTTTTGTTAAGAACTATGGAGCAATAGCAGCACCACTCACCCAACTACTTAAGAAAGGAGCGTACAAATGGGATGCAGAAGTCGAGGGCGCTTTTAGCAAGCTGAAAAAGGCCATGATGACTCTCCCTGTGCTCACCATGCCAGATTTCAACCTACCTTTCGAAATTGAATCAGATGCTTCGGGAGTTGGAGTGGGGGCTGTGCTGACTCAATGCCGGAAGCCAGTGGCTTATTTCAGTAAGACCCTAAGTATGCGGGACAGAGCACGACCAGTATACGAAAGAGAATTACTTGCTGTAGTTCTTGCAGTCCAAAGATGGAGACCTTACTTACTAAGGAGGAAATTCACAGTGAAAACAGACCAAAGGTCGCTTAAGTTTTTATTGGAACAACGGGTTGTGTAG

Protein sequence

MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKVGEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLDGWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKTRVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSRGMDEHVQHLEVVLGLLQDRELYGLEADPEKIRAVSDWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV

Homology

[Close]

BLAST of Cmc08g0236241 vs. NCBI nr
Match: KAA0044648.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1197.6 bits (3097), Expect = 0.0e+00
Identity = 597/636 (93.87%), Postives = 604/636 (94.97%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEIVEEEFFDAETEMKPVEVQ VEN+NIELSINSVVGLNNPGTMKVKGKV
Sbjct: 652  MLVVKEGGEELEIVEEEFFDAETEMKPVEVQNVENINIELSINSVVGLNNPGTMKVKGKV 711

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLV RLGLTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 712  GEEEVVILIDCGATHNFIAEDLVARLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 771

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSL+KT
Sbjct: 772  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLVKT 831

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVK WG DDQGFLVEC+TLECGKLE+EQ+QEQGKV AEPIATLLKQFARVFEWP
Sbjct: 832  RVSLKNLVKAWGVDDQGFLVECKTLECGKLEEEQNQEQGKVIAEPIATLLKQFARVFEWP 891

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 892  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 951

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR
Sbjct: 952  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 1011

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPED EKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 1012 MCPEDTEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 1071

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            SRGMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 1072 SRGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 1131

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGA+KWDAE EGAFSKLKKA
Sbjct: 1132 DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAFKWDAEAEGAFSKLKKA 1191

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVL MPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL
Sbjct: 1192 MMTLPVLAMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 1251

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            AVVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1252 AVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1287

[Close]

BLAST of Cmc08g0236241 vs. NCBI nr
Match: KAA0058186.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1196.8 bits (3095), Expect = 0.0e+00
Identity = 598/636 (94.03%), Postives = 604/636 (94.97%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEI EEEFFDAETEMKPVEVQ VEN+NIELSINSVVGLNNPGTMKVKGKV
Sbjct: 417  MLVVKEGGEELEIGEEEFFDAETEMKPVEVQNVENINIELSINSVVGLNNPGTMKVKGKV 476

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 477  GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 536

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT
Sbjct: 537  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 596

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVK WG DDQGFLVECRTLECGKLE+EQ+QEQGKV AEPIATLLKQFARVFEWP
Sbjct: 597  RVSLKNLVKAWGVDDQGFLVECRTLECGKLEEEQNQEQGKVIAEPIATLLKQFARVFEWP 656

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 657  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 716

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTI DKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR
Sbjct: 717  VLLVRKKDGSWRFCVDYRALNNVTISDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 776

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 777  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 836

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            SRGMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 837  SRGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 896

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGA+KWDAE EGAFSKLKKA
Sbjct: 897  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAFKWDAEAEGAFSKLKKA 956

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVL MPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARP+YERELL
Sbjct: 957  MMTLPVLAMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPIYERELL 1016

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            AVVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1017 AVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1052

[Close]

BLAST of Cmc08g0236241 vs. NCBI nr
Match: TYK00786.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 596/636 (93.71%), Postives = 606/636 (95.28%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEIVEEEFFDAETEMKP EV  VENLNIELS+NSVVGLNNPGTMKVKGKV
Sbjct: 830  MLVVKEGGEELEIVEEEFFDAETEMKPAEVPNVENLNIELSLNSVVGLNNPGTMKVKGKV 889

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLVTRL LTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 890  GEEEVVILIDCGATHNFIAEDLVTRLVLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 949

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT
Sbjct: 950  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 1009

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQ +GKV+AEPIATLL+QFARVFEWP
Sbjct: 1010 RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLLQQFARVFEWP 1069

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 1070 ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 1129

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR
Sbjct: 1130 VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 1189

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 1190 MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 1249

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            S+GMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 1250 SQGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 1309

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTP+NVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAE EGAF+KLKKA
Sbjct: 1310 DWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNKLKKA 1369

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVLTMPDFNLPFEI+SDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL
Sbjct: 1370 MMTLPVLTMPDFNLPFEIKSDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 1429

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            +VVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1430 SVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1465

[Close]

BLAST of Cmc08g0236241 vs. NCBI nr
Match: KAA0060543.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 596/636 (93.71%), Postives = 606/636 (95.28%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEIVEEEFFDAETEMKP EV  VENLNIELS+NSVVGLNNPGTMKVKGKV
Sbjct: 841  MLVVKEGGEELEIVEEEFFDAETEMKPAEVPNVENLNIELSLNSVVGLNNPGTMKVKGKV 900

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLVTRL LTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 901  GEEEVVILIDCGATHNFIAEDLVTRLVLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 960

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT
Sbjct: 961  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 1020

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQ +GKV+AEPIATLL+QFARVFEWP
Sbjct: 1021 RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLLQQFARVFEWP 1080

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 1081 ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 1140

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR
Sbjct: 1141 VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 1200

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 1201 MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 1260

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            S+GMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 1261 SQGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 1320

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTP+NVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAE EGAF+KLKKA
Sbjct: 1321 DWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNKLKKA 1380

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVLTMPDFNLPFEI+SDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL
Sbjct: 1381 MMTLPVLTMPDFNLPFEIKSDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 1440

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            +VVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1441 SVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1476

[Close]

BLAST of Cmc08g0236241 vs. NCBI nr
Match: KAA0038266.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 598/636 (94.03%), Postives = 604/636 (94.97%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEIVEEEFF AETEMKP EV  VENLNIELSINSVVGLNNPGTMKVKGKV
Sbjct: 405  MLVVKEGGEELEIVEEEFFYAETEMKPTEVPNVENLNIELSINSVVGLNNPGTMKVKGKV 464

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 465  GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 524

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT
Sbjct: 525  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 584

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVKTWG DDQGFLVECRTLECGKLEDEQDQE+GKV+AEPIATLL+QFA VFEWP
Sbjct: 585  RVSLKNLVKTWGVDDQGFLVECRTLECGKLEDEQDQERGKVDAEPIATLLQQFACVFEWP 644

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 645  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 704

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYH+IR
Sbjct: 705  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHRIR 764

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 765  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 824

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            SRGMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 825  SRGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 884

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAE EGAF+KLKKA
Sbjct: 885  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNKLKKA 944

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVLTM DFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL
Sbjct: 945  MMTLPVLTMLDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 1004

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            AVVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1005 AVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1040

[Close]

BLAST of Cmc08g0236241 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 4.5e-80
Identity = 190/599 (31.72%), Postives = 307/599 (51.25%), Query Frame = 0


Query: 44  SVVGLNNPGTMKVKGKVGEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSG 103
           S   L  P  + +K K  E  +  LID G+T N  ++++     L +Q T  + +   +G
Sbjct: 6   SATSLGKPQYITIKYK--ENNLKCLIDTGSTVNMTSKNI---FDLPIQNTSTF-IHTSNG 65

Query: 104 TAVKGKGLCRSVEVQLDGWKVTDSFLPLQLG-GVDMILGMQWLHSLGVTEVDWKRLVLTF 163
             +  K +    ++    +  T+ FL        D++LG + L     T + ++   +T 
Sbjct: 66  PLIVNKSIIIPSKIL---FPTTNEFLLHPFSENYDLLLGRKLLAEAKAT-ISYRDQEVTL 125

Query: 164 HHQGRKVVIRGDPSLIKTRVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVN 223
           ++   K +I G  +  ++     N++          +      +  +LE   ++E+ ++ 
Sbjct: 126 YNNKYK-LIEGIATHEQSHFQNVNMIPDTMLRQPNKISPILESDLYRLEHLNNEEKQRL- 185

Query: 224 AEPIATLLKQFARVFEWPATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVD 283
               A L K     +     L      +H I  K      +   Y Y    ++E+E  + 
Sbjct: 186 ---CALLQKYHDIQYHEGDKLTFTNQTKHTINTKHNLPLYS--KYSYPQAYEQEVESQIQ 245

Query: 284 EMLSSGIIRPSKSPYSSPVLLVRKKDGS-----WRFCVDYRALNNVTIPDKFPIPVIEEL 343
           +ML+ GIIR S SPY+SP+ +V KK  +     +R  +DYR LN +T+ D+ PIP ++E+
Sbjct: 246 DMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRHPIPNMDEI 305

Query: 344 FDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQAL 403
             +L   + F+ +DL  G+HQI M PE + KTAF T  GHYE+L MPFGL NAP+TFQ  
Sbjct: 306 LGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKNAPATFQRC 365

Query: 404 MNQVFKPYLRRFVLVFFDDILIYSRGMDEHVQHLEVVLGLLQDRELY------------- 463
           MN + +P L +  LV+ DDI+++S  +DEH+Q L +V   L    L              
Sbjct: 366 MNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDKCEFLKQET 425

Query: 464 ----------GLEADPEKIRAVSDWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQ 523
                     G++ +PEKI A+  +P P+  +E++ FLGLTGYYR+F+ N+  IA P+T+
Sbjct: 426 TFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFADIAKPMTK 485

Query: 524 LLKKGAY--KWDAEVEGAFSKLKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCR 583
            LKK       + E + AF KLK  +   P+L +PDF   F + +DAS V +GAVL+Q  
Sbjct: 486 CLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVALGAVLSQDG 545

Query: 584 KPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQR 612
            P++Y S+TL+  +      E+ELLA+V A + +R YLL R F + +D + L +L   +
Sbjct: 546 HPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPLSWLYRMK 587

[Close]

BLAST of Cmc08g0236241 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.5e-78
Identity = 154/387 (39.79%), Postives = 227/387 (58.66%), Query Frame = 0


Query: 252 HIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKD--- 311
           H+   +   P+  + Y  A   + E+E  V EML+ G+IR S SPY+SP  +V KK    
Sbjct: 197 HVLNTTHNSPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDAS 256

Query: 312 --GSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIRMCPEDI 371
               +R  +DYR LN +TIPD++PIP ++E+  +L     F+ +DL  G+HQI M  E I
Sbjct: 257 GANKYRVVIDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESI 316

Query: 372 EKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIYSRGMDE 431
            KTAF T  GHYE+L MPFGL NAP+TFQ  MN + +P L +  LV+ DDI+I+S  + E
Sbjct: 317 SKTAFSTKSGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTE 376

Query: 432 HVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVSDWPTPS 491
           H+  +++V   L D  L                        G++ +P K++A+  +P P+
Sbjct: 377 HLNSIQLVFTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPT 436

Query: 492 NVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDA---EVEGAFSKLKKAMMT 551
             +E+R FLGLTGYYR+F+ NY  IA P+T  LKK   K D    E   AF KLK  ++ 
Sbjct: 437 KDKEIRAFLGLTGYYRKFIPNYADIAKPMTSCLKKRT-KIDTQKLEYIEAFEKLKALIIR 496

Query: 552 LPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELLAVV 608
            P+L +PDF   F + +DAS + +GAVL+Q   P+++ S+TL+  +      E+ELLA+V
Sbjct: 497 DPILQLPDFEKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIV 556

[Close]

BLAST of Cmc08g0236241 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 3.5e-72
Identity = 154/434 (35.48%), Postives = 240/434 (55.30%), Query Frame = 0


Query: 224 EPIATLLKQFARVFEWPAT-LPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVD 283
           E + +LL +F R+FE P + +  + +++  I   +  DP+  + Y Y  + + E+ER +D
Sbjct: 86  EILNSLLGEFPRIFEPPLSGMSVETAVKAEIRTNT-QDPIYAKSYPYPVNMRGEVERQID 145

Query: 284 EMLSSGIIRPSKSPYSSPVLLVRKK-----DGSWRFCVDYRALNNVTIPDKFPIPVIEEL 343
           E+L  GIIRPS SPY+SP+ +V KK     +  +R  VD++ LN VTIPD +PIP I   
Sbjct: 146 ELLQDGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINAT 205

Query: 344 FDELKGASVFSKLDLKAGYHQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQAL 403
              L  A  F+ LDL +G+HQI M   DI KTAF T  G YEFL +PFGL NAP+ FQ +
Sbjct: 206 LASLGNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRM 265

Query: 404 MNQVFKPYLRRFVLVFFDDILIYSRGMDEHVQHLEVVLGLLQDRELY------------- 463
           ++ + + ++ +   V+ DDI+++S   D H ++L +VL  L    L              
Sbjct: 266 IDDILREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQV 325

Query: 464 ----------GLEADPEKIRAVSDWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQ 523
                     G++ADP+K+RA+S+ P P++V+E++ FLG+T YYR+F+++Y  +A PLT 
Sbjct: 326 EFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTN 385

Query: 524 LLK------------KGAYKWDAEVEGAFSKLKKAMMTLPVLTMPDFNLPFEIESDASGV 583
           L +            K     D     +F+ LK  + +  +L  P F  PF + +DAS  
Sbjct: 386 LTRGLYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNW 445

Query: 584 GVGAVLTQ----CRKPVAYFSKTLSMRDRARPVYERELLAVVLAVQRWRPYLL-RRKFTV 612
            +GAVL+Q      +P+AY S++L+  +      E+E+LA++ ++   R YL       V
Sbjct: 446 AIGAVLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKV 505

[Close]

BLAST of Cmc08g0236241 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 270.4 bits (690), Expect = 5.0e-71
Identity = 157/397 (39.55%), Postives = 219/397 (55.16%), Query Frame = 0


Query: 243 LPPQRS------IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSP 302
           LPP+ +      ++H I +K G     ++PY      ++E+ ++V ++L +  I PSKSP
Sbjct: 572 LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 631

Query: 303 YSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGY 362
            SSPV+LV KKDG++R CVDYR LN  TI D FP+P I+ L   +  A +F+ LDL +GY
Sbjct: 632 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 691

Query: 363 HQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDD 422
           HQI M P+D  KTAF T  G YE+ VMPFGL NAPSTF   M   F+    RFV V+ DD
Sbjct: 692 HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 751

Query: 423 ILIYSRGMDEHVQHLEVVLGLL----------------QDRELYGLEADPEKI------- 482
           ILI+S   +EH +HL+ VL  L                ++ E  G     +KI       
Sbjct: 752 ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 811

Query: 483 RAVSDWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSK 542
            A+ D+PTP  V++ + FLG+  YYRRF+ N   IA P+ QL      +W  + + A  K
Sbjct: 812 AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIDK 871

Query: 543 LKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKP------VAYFSKTLSMRDR 602
           LK A+   PVL   +    + + +DAS  G+GAVL +          V YFSK+L    +
Sbjct: 872 LKDALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQK 931

Query: 603 ARPVYERELLAVVLAVQRWRPYLLRRKFTVKTDQRSL 605
             P  E ELL ++ A+  +R  L  + FT++TD  SL
Sbjct: 932 NYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 965

[Close]

BLAST of Cmc08g0236241 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 270.4 bits (690), Expect = 5.0e-71
Identity = 157/397 (39.55%), Postives = 219/397 (55.16%), Query Frame = 0


Query: 243 LPPQRS------IEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSP 302
           LPP+ +      ++H I +K G     ++PY      ++E+ ++V ++L +  I PSKSP
Sbjct: 598 LPPRPADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSP 657

Query: 303 YSSPVLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGY 362
            SSPV+LV KKDG++R CVDYR LN  TI D FP+P I+ L   +  A +F+ LDL +GY
Sbjct: 658 CSSPVVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGY 717

Query: 363 HQIRMCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDD 422
           HQI M P+D  KTAF T  G YE+ VMPFGL NAPSTF   M   F+    RFV V+ DD
Sbjct: 718 HQIPMEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDD 777

Query: 423 ILIYSRGMDEHVQHLEVVLGLL----------------QDRELYGLEADPEKI------- 482
           ILI+S   +EH +HL+ VL  L                ++ E  G     +KI       
Sbjct: 778 ILIFSESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKC 837

Query: 483 RAVSDWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSK 542
            A+ D+PTP  V++ + FLG+  YYRRF+ N   IA P+ QL      +W  + + A  K
Sbjct: 838 AAIRDFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPI-QLFICDKSQWTEKQDKAIEK 897

Query: 543 LKKAMMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKP------VAYFSKTLSMRDR 602
           LK A+   PVL   +    + + +DAS  G+GAVL +          V YFSK+L    +
Sbjct: 898 LKAALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQK 957

Query: 603 ARPVYERELLAVVLAVQRWRPYLLRRKFTVKTDQRSL 605
             P  E ELL ++ A+  +R  L  + FT++TD  SL
Sbjct: 958 NYPAGELELLGIIKALHHFRYMLHGKHFTLRTDHISL 991

[Close]

BLAST of Cmc08g0236241 vs. ExPASy TrEMBL
Match: A0A5A7TP42 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004030 PE=3 SV=1)

HSP 1 Score: 1197.6 bits (3097), Expect = 0.0e+00
Identity = 597/636 (93.87%), Postives = 604/636 (94.97%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEIVEEEFFDAETEMKPVEVQ VEN+NIELSINSVVGLNNPGTMKVKGKV
Sbjct: 652  MLVVKEGGEELEIVEEEFFDAETEMKPVEVQNVENINIELSINSVVGLNNPGTMKVKGKV 711

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLV RLGLTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 712  GEEEVVILIDCGATHNFIAEDLVARLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 771

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSL+KT
Sbjct: 772  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLVKT 831

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVK WG DDQGFLVEC+TLECGKLE+EQ+QEQGKV AEPIATLLKQFARVFEWP
Sbjct: 832  RVSLKNLVKAWGVDDQGFLVECKTLECGKLEEEQNQEQGKVIAEPIATLLKQFARVFEWP 891

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 892  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 951

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR
Sbjct: 952  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 1011

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPED EKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 1012 MCPEDTEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 1071

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            SRGMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 1072 SRGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 1131

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGA+KWDAE EGAFSKLKKA
Sbjct: 1132 DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAFKWDAEAEGAFSKLKKA 1191

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVL MPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL
Sbjct: 1192 MMTLPVLAMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 1251

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            AVVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1252 AVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1287

[Close]

BLAST of Cmc08g0236241 vs. ExPASy TrEMBL
Match: A0A5A7UVI2 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005060 PE=4 SV=1)

HSP 1 Score: 1196.8 bits (3095), Expect = 0.0e+00
Identity = 598/636 (94.03%), Postives = 604/636 (94.97%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEI EEEFFDAETEMKPVEVQ VEN+NIELSINSVVGLNNPGTMKVKGKV
Sbjct: 417  MLVVKEGGEELEIGEEEFFDAETEMKPVEVQNVENINIELSINSVVGLNNPGTMKVKGKV 476

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 477  GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 536

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT
Sbjct: 537  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 596

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVK WG DDQGFLVECRTLECGKLE+EQ+QEQGKV AEPIATLLKQFARVFEWP
Sbjct: 597  RVSLKNLVKAWGVDDQGFLVECRTLECGKLEEEQNQEQGKVIAEPIATLLKQFARVFEWP 656

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 657  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 716

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTI DKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR
Sbjct: 717  VLLVRKKDGSWRFCVDYRALNNVTISDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 776

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 777  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 836

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            SRGMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 837  SRGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 896

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGA+KWDAE EGAFSKLKKA
Sbjct: 897  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAFKWDAEAEGAFSKLKKA 956

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVL MPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARP+YERELL
Sbjct: 957  MMTLPVLAMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPIYERELL 1016

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            AVVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1017 AVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1052

[Close]

BLAST of Cmc08g0236241 vs. ExPASy TrEMBL
Match: A0A5A7UX59 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G004050 PE=4 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 596/636 (93.71%), Postives = 606/636 (95.28%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEIVEEEFFDAETEMKP EV  VENLNIELS+NSVVGLNNPGTMKVKGKV
Sbjct: 841  MLVVKEGGEELEIVEEEFFDAETEMKPAEVPNVENLNIELSLNSVVGLNNPGTMKVKGKV 900

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLVTRL LTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 901  GEEEVVILIDCGATHNFIAEDLVTRLVLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 960

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT
Sbjct: 961  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 1020

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQ +GKV+AEPIATLL+QFARVFEWP
Sbjct: 1021 RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLLQQFARVFEWP 1080

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 1081 ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 1140

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR
Sbjct: 1141 VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 1200

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 1201 MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 1260

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            S+GMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 1261 SQGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 1320

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTP+NVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAE EGAF+KLKKA
Sbjct: 1321 DWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNKLKKA 1380

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVLTMPDFNLPFEI+SDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL
Sbjct: 1381 MMTLPVLTMPDFNLPFEIKSDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 1440

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            +VVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1441 SVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1476

[Close]

BLAST of Cmc08g0236241 vs. ExPASy TrEMBL
Match: A0A5D3BRA0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold420G00550 PE=4 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 596/636 (93.71%), Postives = 606/636 (95.28%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEIVEEEFFDAETEMKP EV  VENLNIELS+NSVVGLNNPGTMKVKGKV
Sbjct: 830  MLVVKEGGEELEIVEEEFFDAETEMKPAEVPNVENLNIELSLNSVVGLNNPGTMKVKGKV 889

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLVTRL LTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 890  GEEEVVILIDCGATHNFIAEDLVTRLVLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 949

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT
Sbjct: 950  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 1009

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQ +GKV+AEPIATLL+QFARVFEWP
Sbjct: 1010 RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQGRGKVDAEPIATLLQQFARVFEWP 1069

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 1070 ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 1129

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR
Sbjct: 1130 VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 1189

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 1190 MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 1249

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            S+GMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 1250 SQGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 1309

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTP+NVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAE EGAF+KLKKA
Sbjct: 1310 DWPTPTNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNKLKKA 1369

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVLTMPDFNLPFEI+SDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL
Sbjct: 1370 MMTLPVLTMPDFNLPFEIKSDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 1429

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            +VVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1430 SVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1465

[Close]

BLAST of Cmc08g0236241 vs. ExPASy TrEMBL
Match: A0A5A7T7R9 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G001160 PE=4 SV=1)

HSP 1 Score: 1194.1 bits (3088), Expect = 0.0e+00
Identity = 598/636 (94.03%), Postives = 604/636 (94.97%), Query Frame = 0


Query: 1    MLVVKEGGEELEIVEEEFFDAETEMKPVEVQTVENLNIELSINSVVGLNNPGTMKVKGKV 60
            MLVVKEGGEELEIVEEEFF AETEMKP EV  VENLNIELSINSVVGLNNPGTMKVKGKV
Sbjct: 405  MLVVKEGGEELEIVEEEFFYAETEMKPTEVPNVENLNIELSINSVVGLNNPGTMKVKGKV 464

Query: 61   GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCRSVEVQLD 120
            GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKG+CRSVEVQLD
Sbjct: 465  GEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGMCRSVEVQLD 524

Query: 121  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 180
            GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT
Sbjct: 525  GWKVTDSFLPLQLGGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVIRGDPSLIKT 584

Query: 181  RVSLKNLVKTWGADDQGFLVECRTLECGKLEDEQDQEQGKVNAEPIATLLKQFARVFEWP 240
            RVSLKNLVKTWG DDQGFLVECRTLECGKLEDEQDQE+GKV+AEPIATLL+QFA VFEWP
Sbjct: 585  RVSLKNLVKTWGVDDQGFLVECRTLECGKLEDEQDQERGKVDAEPIATLLQQFACVFEWP 644

Query: 241  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 300
            ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP
Sbjct: 645  ATLPPQRSIEHHIYLKSGTDPVNVRPYRYAHHQKEEMERLVDEMLSSGIIRPSKSPYSSP 704

Query: 301  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHQIR 360
            VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYH+IR
Sbjct: 705  VLLVRKKDGSWRFCVDYRALNNVTIPDKFPIPVIEELFDELKGASVFSKLDLKAGYHRIR 764

Query: 361  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 420
            MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY
Sbjct: 765  MCPEDIEKTAFRTHEGHYEFLVMPFGLTNAPSTFQALMNQVFKPYLRRFVLVFFDDILIY 824

Query: 421  SRGMDEHVQHLEVVLGLLQDRELY-----------------------GLEADPEKIRAVS 480
            SRGMDEHVQHLEVVLGLLQDRELY                       GLEADPEKIRAVS
Sbjct: 825  SRGMDEHVQHLEVVLGLLQDRELYVNMEKCSFAKPRISYLGHFISEQGLEADPEKIRAVS 884

Query: 481  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEVEGAFSKLKKA 540
            DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAE EGAF+KLKKA
Sbjct: 885  DWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWDAEAEGAFNKLKKA 944

Query: 541  MMTLPVLTMPDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 600
            MMTLPVLTM DFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL
Sbjct: 945  MMTLPVLTMLDFNLPFEIESDASGVGVGAVLTQCRKPVAYFSKTLSMRDRARPVYERELL 1004

Query: 601  AVVLAVQRWRPYLLRRKFTVKTDQRSLKFLLEQRVV 614
            AVVLAVQRWRPYLL RKFTVKTDQRSLKFLLEQRVV
Sbjct: 1005 AVVLAVQRWRPYLLGRKFTVKTDQRSLKFLLEQRVV 1040

[Close]

BLAST of Cmc08g0236241 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 3.0e-26
Identity = 54/89 (60.67%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 445 GLEADPEKIRAVSDWPTPSNVREVRGFLGLTGYYRRFVKNYGAIAAPLTQLLKKGAYKWD 504
           G+ ADP K+ A+  WP P N  E+RGFLGLTGYYRRFVKNYG I  PLT+LLKK + KW 
Sbjct: 43  GVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWT 102

Query: 505 AEVEGAFSKLKKAMMTLPVLTMPDFNLPF 534
                AF  LK A+ TLPVL +PD  LPF
Sbjct: 103 EMAALAFKALKGAVTTLPVLALPDLKLPF 131

[Close]

BLAST of Cmc08g0236241 vs. TAIR 10
Match: AT3G29750.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 78.2 bits (191), Expect = 2.6e-14
Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 0


Query: 45  VVGLNNPGTMKVKGKVGEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGT 104
           V+ L     M+  G + + +VV+ ID GAT NFI  +L   L L    T    V+LG   
Sbjct: 115 VIDLTRNKGMRFYGFILDHKVVVAIDSGATDNFILVELAFSLKLPTSITNQASVLLGQRQ 174

Query: 105 AVKGKGLCRSVEVQLDGWKVTDSFLPLQLG--GVDMILGMQWLHSLGVTEVDWKRLVLTF 164
            ++  G C  + + +   ++T++FL L L    VD+ILG +WL  LG T V+W+    +F
Sbjct: 175 CIQSVGTCLGIRLWVQEVEITENFLLLDLAKTDVDVILGYEWLSKLGETMVNWQNQDFSF 234

Query: 165 HHQGRKVVI---RGDPSLIKTRVSLKN 187
            H  + + +     +   + T+V +K+
Sbjct: 235 SHNQQWITLCAEHEELEQVTTKVKMKS 261

[Close]

BLAST of Cmc08g0236241 vs. TAIR 10
Match: AT3G30770.1 (Eukaryotic aspartyl protease family protein )

HSP 1 Score: 58.5 bits (140), Expect = 2.1e-08
Identity = 40/138 (28.99%), Postives = 69/138 (50.00%), Query Frame = 0


Query: 54  MKVKGKVGEEEVVILIDCGATHNFIAEDLVTRLGLTLQETPNYGVILGSGTAVKGKGLCR 113
           M+  G +   +VV++ID GAT+NFI+++L   L L    T    V+LG    ++  G C 
Sbjct: 284 MRFYGFISCHKVVVVIDSGATNNFISDELALVLKLPTSTTNQASVLLGQRQCIQTIGTCF 343

Query: 114 SVEVQLDGWKVTDSFLPLQL--GGVDMILGMQWLHSLGVTEVDWKRLVLTFHHQGRKVVI 173
            + + +   ++ ++FL L L    VD+ILG     +L    + W     +F H  + V +
Sbjct: 344 GINLLVQEVEINENFLLLDLTKTDVDVILGYGGSQNLERQWLIWLNQDFSFFHNQQWVTL 403

Query: 174 -RGDPSL--IKTRVSLKN 187
              D  L  + T+V +K+
Sbjct: 404 CAKDKELEQVTTKVKMKS 421

[Close]

BLAST of Cmc08g0236241 vs. TAIR 10
Match: ATMG00850.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 50.1 bits (118), Expect = 7.6e-06
Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 0


Query: 273 QKEEMERLVDEMLSSGIIRPSKSPYSSPVLLVRKKDGSW 312
           ++  ++  + EML + II+PS SPYSSPVLLV+KKDG W
Sbjct: 41  RRTRLKNWLGEMLEARIIQPSISPYSSPVLLVQKKDGGW 79

The following BLAST results are available for this feature:

BLAST of Cmc08g0236241 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0044648.1	0.0e+00	93.87	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0058186.1	0.0e+00	94.03	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK00786.1	0.0e+00	93.71	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0060543.1	0.0e+00	93.71	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0038266.1	0.0e+00	94.03	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0236241 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	4.5e-80	31.72	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	5.5e-78	39.79	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q8I7P9	3.5e-72	35.48	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	5.0e-71	39.55	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	5.0e-71	39.55	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc08g0236241 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TP42	0.0e+00	93.87	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UVI2	0.0e+00	94.03	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7UX59	0.0e+00	93.71	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5D3BRA0	0.0e+00	93.71	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T7R9	0.0e+00	94.03	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc08g0236241 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	3.0e-26	60.67	DNA/RNA polymerases superfamily protein	[more]
AT3G29750.1	2.6e-14	30.61	Eukaryotic aspartyl protease family protein	[more]
AT3G30770.1	2.1e-08	28.99	Eukaryotic aspartyl protease family protein	[more]
ATMG00850.1	7.6e-06	56.41	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 304..457 e-value: 5.3E-27 score: 94.8
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 285..476 score: 15.291804
None	No IPR available	GENE3D	3.10.20.370		coord: 532..599 e-value: 1.9E-10 score: 42.6
None	No IPR available	PFAM	PF08284	RVP_2	coord: 65..150 e-value: 9.2E-13 score: 48.2
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 249..389 e-value: 8.3E-83 score: 278.9
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 37..415 coord: 479..585
None	No IPR available	PANTHER	PTHR24559:SF319	SUBFAMILY NOT NAMED	coord: 37..415 coord: 479..585
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 56..146 e-value: 4.14086E-22 score: 88.9327
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 534..611 e-value: 2.19575E-30 score: 113.356
None	No IPR available	CDD	cd01647	RT_LTR	coord: 288..452 e-value: 1.44369E-88 score: 270.621
IPR041577	Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain	PFAM	PF17919	RT_RNaseH_2	coord: 503..597 e-value: 7.2E-30 score: 103.0
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 455..531 e-value: 9.2E-28 score: 98.1
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 329..444 e-value: 8.3E-83 score: 278.9
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 33..170 e-value: 1.4E-21 score: 78.6
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 49..151
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 230..612

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0236241.1	Cmc08g0236241.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006488	dolichol-linked oligosaccharide biosynthetic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding