Cmc08g0236031 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0236031
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionBeta-galactosidase
LocationCMiso1.1chr08: 32350551 .. 32351309 (+)
RNA-Seq ExpressionCmc08g0236031
SyntenyCmc08g0236031
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGGATGTCGTCCTGCTAATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTGATATTTTCTTTGTTGTAAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATAAGAAACATATGGAAGCTGTTAACAGAATTCTCATATACTTGAAACATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGAATCTGTTATTGACAGAAAGTCTACCTCCAGTTATTGTACTTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGTTGAGGCTGAATACAGAGCTATGAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCAGTTCAACATGATAGAACTAAACATGTTGAGATTGATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGTATTCTGTACATTCCTTCAAGCCAACAGATTGCTGATGTTAACGAGGGGCTTATCAGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATCGATATTTACGTCCCAACTTGA

mRNA sequence

ATGTTGGGATGTCGTCCTGCTAATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTGATATTTTCTTTGTTGTAAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATAAGAAACATATGGAAGCTGTTAACAGAATTCTCATATACTTGAAACATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGAATCTGTTATTGACAGAAAGTCTACCTCCAGTTATTGTACTTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGTTGAGGCTGAATACAGAGCTATGAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCAGTTCAACATGATAGAACTAAACATGTTGAGATTGATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGTATTCTGTACATTCCTTCAAGCCAACAGATTGCTGATGTTAACGAGGGGCTTATCAGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATCGATATTTACGTCCCAACTTGA

Coding sequence (CDS)

ATGTTGGGATGTCGTCCTGCTAATACTCCTATTGAATTCAACTGTAAACTAGGAAACTCTGATGATCAAGTTCCAGTTGATAAAGAACAATATCAGCGCCTTGTAGGTAAATTAATTTACTTATCCCATACTCGTCCTGATATTTTCTTTGTTGTAAGTGTTGTCAGCCAGTTTATGCAGGCTCCCTATAAGAAACATATGGAAGCTGTTAACAGAATTCTCATATACTTGAAACATACACCTGGTAAAGGGTTGATGTTTAGAAAAACAAATAGAAAGACCATTGAGGCATATACTGACTCAGATTGGGCAGAATCTGTTATTGACAGAAAGTCTACCTCCAGTTATTGTACTTTTGTTTGGGGCAATCTTGTAACTTGGAGGAGTAAGAAGCAAAGTGTTGTGGCCAGGAGCAGTGTTGAGGCTGAATACAGAGCTATGAGTCTGGGAATATGTGAGGAAATTTGGCTCCAGAAAGTCTTGTCAGATCTTCATCAGGAATGTGAGACACCATTGAAGCTTTTTTGTGATAATAAAGCCGCTATTAGTATTGCTAACAACCCAGTTCAACATGATAGAACTAAACATGTTGAGATTGATCGGCATTTCATCAAAGAAAGACTTGACAGTGGAAGCATATGTATTCTGTACATTCCTTCAAGCCAACAGATTGCTGATGTTAACGAGGGGCTTATCAGACCACACTTCGACCTTTGCGTTAGCAAGTTGGGACTCATCGATATTTACGTCCCAACTTGA

Protein sequence

MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQAPYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADVNEGLIRPHFDLCVSKLGLIDIYVPT
Homology
BLAST of Cmc08g0236031 vs. NCBI nr
Match: KAA0045052.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 521.9 bits (1343), Expect = 3.0e-144
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0

Query: 1   MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
           MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ
Sbjct: 206 MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 265

Query: 61  APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
           APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV
Sbjct: 266 APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 325

Query: 121 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
           WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 326 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 385

Query: 181 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADVNEGLIRPHFDLCV 240
           AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADVNEGLIRPHFDLCV
Sbjct: 386 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADVNEGLIRPHFDLCV 445

Query: 241 SKLGLIDIYVPT 253
           SKLGLIDIYVPT
Sbjct: 446 SKLGLIDIYVPT 457

BLAST of Cmc08g0236031 vs. NCBI nr
Match: TYJ96275.1 (Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa])

HSP 1 Score: 510.0 bits (1312), Expect = 1.2e-140
Identity = 248/253 (98.02%), Postives = 250/253 (98.81%), Query Frame = 0

Query: 1   MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
           MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ
Sbjct: 206 MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 265

Query: 61  APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
           APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV
Sbjct: 266 APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 325

Query: 121 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
           WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 326 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 385

Query: 181 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIRPHFDLC 240
           AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICI YIPSSQQIADV  +GL+RPHFDLC
Sbjct: 386 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLC 445

Query: 241 VSKLGLIDIYVPT 253
           VSKLGLIDIYVPT
Sbjct: 446 VSKLGLIDIYVPT 458

BLAST of Cmc08g0236031 vs. NCBI nr
Match: TYJ99952.1 (Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 489.6 bits (1259), Expect = 1.6e-134
Identity = 238/253 (94.07%), Postives = 244/253 (96.44%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
            MLGCRPA+TPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDI F VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
            APY+KHMEAVNRIL YLK+TPGKGLMFRKTNRKTIEAYTDSDWA SVIDRKSTS YCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
            WGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 1532

Query: 181  AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIRPHFDLC 240
            AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICI YIPSSQQIADV  +GL+RPHFDLC
Sbjct: 1533 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLC 1592

Query: 241  VSKLGLIDIYVPT 253
            VSKLGLIDIY+PT
Sbjct: 1593 VSKLGLIDIYLPT 1605

BLAST of Cmc08g0236031 vs. NCBI nr
Match: TYK08054.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 489.6 bits (1259), Expect = 1.6e-134
Identity = 238/253 (94.07%), Postives = 244/253 (96.44%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
            MLGCRPA+TPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDI F VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
            APY+KHMEAVNRIL YLK+TPGKGLMFRKTNRKTIEAYTDSDWA SVIDRKSTS YCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
            WGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 1532

Query: 181  AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIRPHFDLC 240
            AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICI YIPSSQQIADV  +GL+RPHFDLC
Sbjct: 1533 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLC 1592

Query: 241  VSKLGLIDIYVPT 253
            VSKLGLIDIY+PT
Sbjct: 1593 VSKLGLIDIYLPT 1605

BLAST of Cmc08g0236031 vs. NCBI nr
Match: KAA0048203.1 (Beta-galactosidase [Cucumis melo var. makuwa])

HSP 1 Score: 489.6 bits (1259), Expect = 1.6e-134
Identity = 238/253 (94.07%), Postives = 244/253 (96.44%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
            MLGCRPA+TPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDI F VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
            APY+KHMEAVNRIL YLK+TPGKGLMFRKTNRKTIEAYTDSDWA SVIDRKSTS YCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
            WGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 1532

Query: 181  AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIRPHFDLC 240
            AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICI YIPSSQQIADV  +GL+RPHFDLC
Sbjct: 1533 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLC 1592

Query: 241  VSKLGLIDIYVPT 253
            VSKLGLIDIY+PT
Sbjct: 1593 VSKLGLIDIYLPT 1605

BLAST of Cmc08g0236031 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.6e-45
Identity = 92/246 (37.40%), Postives = 146/246 (59.35%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
            M+  +P  TP+  + KL         D  +Y+ +VG L YL+ TRPDI + V+ +SQFM 
Sbjct: 1215 MITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQFMH 1274

Query: 61   APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
             P ++H++A+ RIL YL  TP  G+  +K N  ++ AY+D+DWA    D  ST+ Y  ++
Sbjct: 1275 MPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYVSTNGYIVYL 1334

Query: 121  WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
              + ++W SKKQ  V RSS EAEYR+++    E  W+  +L++L      P  ++CDN  
Sbjct: 1335 GHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDNVG 1394

Query: 181  AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIAD-VNEGLIRPHFDLC 240
            A  +  NPV H R KH+ ID HFI+ ++ SG++ ++++ +  Q+AD + + L R  F   
Sbjct: 1395 ATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQNF 1454

Query: 241  VSKLGL 246
             SK+G+
Sbjct: 1455 ASKIGV 1460

BLAST of Cmc08g0236031 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 5.3e-43
Identity = 91/250 (36.40%), Postives = 149/250 (59.60%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLG-NSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFM 60
            ML  +P  TP+  + KL  +S  ++P D  +Y+ +VG L YL+ TRPD+ + V+ +SQ+M
Sbjct: 1198 MLTAKPVATPMATSPKLTLHSGTKLP-DPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYM 1257

Query: 61   QAPYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTF 120
              P   H  A+ R+L YL  TP  G+  +K N  ++ AY+D+DWA    D  ST+ Y  +
Sbjct: 1258 HMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVY 1317

Query: 121  VWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNK 180
            +  + ++W SKKQ  V RSS EAEYR+++    E  W+  +L++L  +   P  ++CDN 
Sbjct: 1318 LGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNV 1377

Query: 181  AAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIAD-VNEGLIRPHFDL 240
             A  +  NPV H R KH+ +D HFI+ ++ SG++ ++++ +  Q+AD + + L R  F  
Sbjct: 1378 GATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQN 1437

Query: 241  CVSKLGLIDI 249
               K+G+I +
Sbjct: 1438 FSRKIGVIKV 1446

BLAST of Cmc08g0236031 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 163.7 bits (413), Expect = 2.7e-39
Identity = 95/253 (37.55%), Postives = 148/253 (58.50%), Query Frame = 0

Query: 1    MLGCRPANTPI--EFNCKLGNSDDQVPVDKEQYQRLVGKLIYLS-HTRPDIFFVVSVVSQ 60
            M  C   +TP+  + N +L NSD+         + L+G L+Y+   TRPD+   V+++S+
Sbjct: 1152 MENCNAVSTPLPSKINYELLNSDEDC---NTPCRSLIGCLMYIMLCTRPDLTTAVNILSR 1211

Query: 61   FMQAPYKKHMEAVNRILIYLKHTPGKGLMFRK--TNRKTIEAYTDSDWAESVIDRKSTSS 120
            +      +  + + R+L YLK T    L+F+K       I  Y DSDWA S IDRKST+ 
Sbjct: 1212 YSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTG 1271

Query: 121  YCTFVWG-NLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKL 180
            Y   ++  NL+ W +K+Q+ VA SS EAEY A+   + E +WL+ +L+ ++ + E P+K+
Sbjct: 1272 YLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKI 1331

Query: 181  FCDNKAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIR 240
            + DN+  ISIANNP  H R KH++I  HF +E++ +  IC+ YIP+  Q+AD+  + L  
Sbjct: 1332 YEDNQGCISIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPA 1391

Query: 241  PHFDLCVSKLGLI 247
              F     KLGL+
Sbjct: 1392 ARFVELRDKLGLL 1401

BLAST of Cmc08g0236031 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.1e-35
Identity = 90/255 (35.29%), Postives = 148/255 (58.04%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLGNS------DDQVPVDKEQYQRLVGKLIY-LSHTRPDIFFVVS 60
            M   +P +TP+  + KL         +++  + K  Y   VG L+Y +  TRPDI   V 
Sbjct: 1075 MKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVG 1134

Query: 61   VVSQFMQAPYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKST 120
            VVS+F++ P K+H EAV  IL YL+ T G  L F  ++   ++ YTD+D A  + +RKS+
Sbjct: 1135 VVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGSD-PILKGYTDADMAGDIDNRKSS 1194

Query: 121  SSYCTFVWGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSD--LHQECETP 180
            + Y     G  ++W+SK Q  VA S+ EAEY A +    E IWL++ L +  LHQ+    
Sbjct: 1195 TGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQK---E 1254

Query: 181  LKLFCDNKAAISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADVNEGL 240
              ++CD+++AI ++ N + H RTKH+++  H+I+E +D  S+ +L I +++  AD+   +
Sbjct: 1255 YVVYCDSQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKV 1314

Query: 241  I-RPHFDLCVSKLGL 246
            + R  F+LC   +G+
Sbjct: 1315 VPRNKFELCKELVGM 1325

BLAST of Cmc08g0236031 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.1e-27
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 0

Query: 1   MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
           ML C+P +TP+        S  + P D   ++ +VG L YL+ TRPDI + V++V Q M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
            P     + + R+L Y+K T   GL   K ++  ++A+ DSDWA     R+ST+ +CTF+
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 190

Query: 121 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW 157
             N+++W +K+Q  V+RSS E EYRA++L   E  W
Sbjct: 191 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc08g0236031 vs. ExPASy TrEMBL
Match: A0A5A7TNV6 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00410 PE=4 SV=1)

HSP 1 Score: 521.9 bits (1343), Expect = 1.4e-144
Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 0

Query: 1   MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
           MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ
Sbjct: 206 MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 265

Query: 61  APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
           APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV
Sbjct: 266 APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 325

Query: 121 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
           WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 326 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 385

Query: 181 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADVNEGLIRPHFDLCV 240
           AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADVNEGLIRPHFDLCV
Sbjct: 386 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADVNEGLIRPHFDLCV 445

Query: 241 SKLGLIDIYVPT 253
           SKLGLIDIYVPT
Sbjct: 446 SKLGLIDIYVPT 457

BLAST of Cmc08g0236031 vs. ExPASy TrEMBL
Match: A0A5D3BCW1 (Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00680 PE=4 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 5.7e-141
Identity = 248/253 (98.02%), Postives = 250/253 (98.81%), Query Frame = 0

Query: 1   MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
           MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ
Sbjct: 206 MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 265

Query: 61  APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
           APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV
Sbjct: 266 APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 325

Query: 121 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
           WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 326 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 385

Query: 181 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIRPHFDLC 240
           AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICI YIPSSQQIADV  +GL+RPHFDLC
Sbjct: 386 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLC 445

Query: 241 VSKLGLIDIYVPT 253
           VSKLGLIDIYVPT
Sbjct: 446 VSKLGLIDIYVPT 458

BLAST of Cmc08g0236031 vs. ExPASy TrEMBL
Match: A0A5D3BJK7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G001020 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.0e-135
Identity = 238/253 (94.07%), Postives = 244/253 (96.44%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
            MLGCRPA+TPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDI F VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
            APY+KHMEAVNRIL YLK+TPGKGLMFRKTNRKTIEAYTDSDWA SVIDRKSTS YCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
            WGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 1532

Query: 181  AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIRPHFDLC 240
            AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICI YIPSSQQIADV  +GL+RPHFDLC
Sbjct: 1533 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLC 1592

Query: 241  VSKLGLIDIYVPT 253
            VSKLGLIDIY+PT
Sbjct: 1593 VSKLGLIDIYLPT 1605

BLAST of Cmc08g0236031 vs. ExPASy TrEMBL
Match: A0A5D3C4T4 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00040 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.0e-135
Identity = 238/253 (94.07%), Postives = 244/253 (96.44%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
            MLGCRPA+TPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDI F VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
            APY+KHMEAVNRIL YLK+TPGKGLMFRKTNRKTIEAYTDSDWA SVIDRKSTS YCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
            WGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 1532

Query: 181  AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIRPHFDLC 240
            AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICI YIPSSQQIADV  +GL+RPHFDLC
Sbjct: 1533 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLC 1592

Query: 241  VSKLGLIDIYVPT 253
            VSKLGLIDIY+PT
Sbjct: 1593 VSKLGLIDIYLPT 1605

BLAST of Cmc08g0236031 vs. ExPASy TrEMBL
Match: A0A5A7VLQ7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G00690 PE=4 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 8.0e-135
Identity = 238/253 (94.07%), Postives = 244/253 (96.44%), Query Frame = 0

Query: 1    MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
            MLGCRPA+TPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDI F VSVVSQFMQ
Sbjct: 1353 MLGCRPADTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDISFAVSVVSQFMQ 1412

Query: 61   APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
            APY+KHMEAVNRIL YLK+TPGKGLMFRKTNRKTIEAYTDSDWA SVIDRKSTS YCTFV
Sbjct: 1413 APYEKHMEAVNRILRYLKNTPGKGLMFRKTNRKTIEAYTDSDWAGSVIDRKSTSGYCTFV 1472

Query: 121  WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
            WGNLVTWRSKKQSVVARSS EAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA
Sbjct: 1473 WGNLVTWRSKKQSVVARSSAEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 1532

Query: 181  AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICILYIPSSQQIADV-NEGLIRPHFDLC 240
            AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICI YIPSSQQIADV  +GL+RPHFDLC
Sbjct: 1533 AISIANNPVQHDRTKHVEIDRHFIKERLDSGSICIPYIPSSQQIADVLTKGLLRPHFDLC 1592

Query: 241  VSKLGLIDIYVPT 253
            VSKLGLIDIY+PT
Sbjct: 1593 VSKLGLIDIYLPT 1605

BLAST of Cmc08g0236031 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 179.5 bits (454), Expect = 3.4e-45
Identity = 87/207 (42.03%), Postives = 130/207 (62.80%), Query Frame = 0

Query: 1   MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
           +LGC+P++ P++ +           VD + Y+RL+G+L+YL  TR DI F V+ +SQF +
Sbjct: 348 LLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSE 407

Query: 61  APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
           AP   H +AV +IL Y+K T G+GL +       ++ ++D+ +      R+ST+ YC F+
Sbjct: 408 APRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFL 467

Query: 121 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIWLQKVLSDLHQECETPLKLFCDNKA 180
             +L++W+SKKQ VV++SS EAEYRA+S    E +WL +   +L      P  LFCDN A
Sbjct: 468 GTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTA 527

Query: 181 AISIANNPVQHDRTKHVEIDRHFIKER 208
           AI IA N V H+RTKH+E D H ++ER
Sbjct: 528 AIHIATNAVFHERTKHIESDCHSVRER 554

BLAST of Cmc08g0236031 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 123.2 bits (308), Expect = 2.9e-28
Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 0

Query: 1   MLGCRPANTPIEFNCKLGNSDDQVPVDKEQYQRLVGKLIYLSHTRPDIFFVVSVVSQFMQ 60
           ML C+P +TP+        S  + P D   ++ +VG L YL+ TRPDI + V++V Q M 
Sbjct: 71  MLDCKPMSTPLPLKLNSSVSTAKYP-DPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMH 130

Query: 61  APYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAYTDSDWAESVIDRKSTSSYCTFV 120
            P     + + R+L Y+K T   GL   K ++  ++A+ DSDWA     R+ST+ +CTF+
Sbjct: 131 EPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFL 190

Query: 121 WGNLVTWRSKKQSVVARSSVEAEYRAMSLGICEEIW 157
             N+++W +K+Q  V+RSS E EYRA++L   E  W
Sbjct: 191 GCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225

BLAST of Cmc08g0236031 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 69.7 bits (169), Expect = 3.8e-12
Identity = 33/82 (40.24%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 39  IYLSHTRPDIFFVVSVVSQFMQAPYKKHMEAVNRILIYLKHTPGKGLMFRKTNRKTIEAY 98
           +YL+ TRPD+ F V+ +SQF  A     M+AV ++L Y+K T G+GL +  T+   ++A+
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 99  TDSDWAESVIDRKSTSSYCTFV 121
            DSDWA     R+S + +C+ V
Sbjct: 61  ADSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0045052.13.0e-144100.00Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa][more]
TYJ96275.11.2e-14098.02Cysteine-rich RLK (receptor-like protein kinase) 8 [Cucumis melo var. makuwa][more]
TYJ99952.11.6e-13494.07Beta-galactosidase [Cucumis melo var. makuwa] >TYK02395.1 Beta-galactosidase [Cu... [more]
TYK08054.11.6e-13494.07Beta-galactosidase [Cucumis melo var. makuwa][more]
KAA0048203.11.6e-13494.07Beta-galactosidase [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Q94HW25.6e-4537.40Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT945.3e-4336.40Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P041462.7e-3937.55Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P109783.1e-3535.29Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P925194.1e-2738.46Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A5A7TNV61.4e-144100.00Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3BCW15.7e-14198.02Cysteine-rich RLK (Receptor-like protein kinase) 8 OS=Cucumis melo var. makuwa O... [more]
A0A5D3BJK78.0e-13594.07Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G0... [more]
A0A5D3C4T48.0e-13594.07Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10G00... [more]
A0A5A7VLQ78.0e-13594.07Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold115G0... [more]
Match NameE-valueIdentityDescription
AT4G23160.13.4e-4542.03cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.12.9e-2838.46DNA/RNA polymerases superfamily protein [more]
ATMG00240.13.8e-1240.24Gag-Pol-related retrotransposon family protein [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 27..158
NoneNo IPR availablePANTHERPTHR11439:SF352SUBFAMILY NOT NAMEDcoord: 27..158
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 96..227
e-value: 2.98882E-71
score: 212.714
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 22..199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0236031.1Cmc08g0236031.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0016310 phosphorylation
molecular_function GO:0016301 kinase activity
molecular_function GO:0003676 nucleic acid binding