Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAAACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGTATTTGTCATGATTAATTATGATAACAAGTTTTTATATGTATAAGATATAAACAATATAATTGTTTTAATGCAGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTCCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAAGCCGCCGAGGATGCGCATGTAAGTTATACCCTTATTAATTATCCACTTTTATTATATATTTTTGCGCGTTACCTAACATAATTTTTAAATTTGTTGCAGAATCAAATGCTGGAACTCCAATCCCAGCCTATCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATTAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCTCTCAGAACGGCAAGTGCAAGCAGTTCGTCGACATCTTGTTCGCAGTC
mRNA sequence
ATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAAACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTCCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAAGCCGCCGAGGATGCGCATAATCAAATGCTGGAACTCCAATCCCAGCCTATCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATTAGGTGTTGGGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCTCTCAGAACGGCAAGTGCAAGCAGTTCGTCGACATCTTGTTCGCAGTC
Coding sequence (CDS)
ATGCTCACGACCTTTAAAGAGTTCCGGGCCGACTGTCATAAACATTTCAAAAAGTACAGCGACCCGGAGGAGGCTCGTGCCAACCCACCAAACGCATTGGTTGGACGTGATGAGGATTGGCACTTCCTCTGCGACCATTATATCAGCCGTGCATTCCAGGAGCAATCACGGACAAACAAGGCTGCTAGACAGAAGCAGCCTTACAATCATAGTAGCGGGTCCAAGTCGTTTCTACAACGACAGTATGAGCTCGCTGAAAGAAGAGGGCAGCCGGTCGATCGTGTGGAATTGTTCCGGGAAACACACGTTCGAGCTGGGACATTCGTGTCGCAAGCCGCCGAGGATGCGCATAATCAAATGCTGGAACTCCAATCCCAGCCTATCCCAGAGGGTAGTCAGCCACTCTCTGAGGATGAGATATGCGATTAG
Protein sequence
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNKAARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQMLELQSQPIPEGSQPLSEDEICD
Homology
BLAST of Cmc08g0234901 vs. NCBI nr
Match:
KAA0040239.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 232 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 291
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 292 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 351
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 352 LELQSQPIPEGSQPLSEDEICD 373
BLAST of Cmc08g0234901 vs. NCBI nr
Match:
KAA0047296.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 131 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 190
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 191 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 250
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 251 LELQSQPIPEGSQPLSEDEICD 272
BLAST of Cmc08g0234901 vs. NCBI nr
Match:
TYK02173.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK10967.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 135 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 194
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 195 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 254
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 255 LELQSQPIPEGSQPLSEDEICD 276
BLAST of Cmc08g0234901 vs. NCBI nr
Match:
TYK24683.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 231 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 290
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 291 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 350
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 351 LELQSQPIPEGSQPLSEDEICD 372
BLAST of Cmc08g0234901 vs. NCBI nr
Match:
KAA0025989.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0050076.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])
HSP 1 Score: 292.7 bits (748), Expect = 1.7e-75
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 136 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 195
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 196 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 255
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 256 LELQSQPIPEGSQPLSEDEICD 277
BLAST of Cmc08g0234901 vs. ExPASy TrEMBL
Match:
A0A5D3CG61 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00520 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 8.1e-76
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 135 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 194
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 195 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 254
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 255 LELQSQPIPEGSQPLSEDEICD 276
BLAST of Cmc08g0234901 vs. ExPASy TrEMBL
Match:
A0A5A7SL57 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003100 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 8.1e-76
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 136 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 195
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 196 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 255
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 256 LELQSQPIPEGSQPLSEDEICD 277
BLAST of Cmc08g0234901 vs. ExPASy TrEMBL
Match:
A0A5D3CLU4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G00810 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 8.1e-76
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 135 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 194
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 195 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 254
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 255 LELQSQPIPEGSQPLSEDEICD 276
BLAST of Cmc08g0234901 vs. ExPASy TrEMBL
Match:
A0A5D3BDL4 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23G00190 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 8.1e-76
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 194 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 253
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 254 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 313
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 314 LELQSQPIPEGSQPLSEDEICD 335
BLAST of Cmc08g0234901 vs. ExPASy TrEMBL
Match:
A0A5A7TZB1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00930 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 8.1e-76
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0
Query: 1 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 60
MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK
Sbjct: 131 MLTTFKEFRADCHKHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAFQEQSRTNK 190
Query: 61 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 120
AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM
Sbjct: 191 AARQKQPYNHSSGSKSFLQRQYELAERRGQPVDRVELFRETHVRAGTFVSQAAEDAHNQM 250
Query: 121 LELQSQPIPEGSQPLSEDEICD 143
LELQSQPIPEGSQPLSEDEICD
Sbjct: 251 LELQSQPIPEGSQPLSEDEICD 272
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0040239.1 | 1.7e-75 | 100.00 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| KAA0047296.1 | 1.7e-75 | 100.00 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| TYK02173.1 | 1.7e-75 | 100.00 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYK10967.1 CACTA en-... | [more] |
| TYK24683.1 | 1.7e-75 | 100.00 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] | [more] |
| KAA0025989.1 | 1.7e-75 | 100.00 | CACTA en-spm transposon protein [Cucumis melo var. makuwa] >KAA0050076.1 CACTA e... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3CG61 | 8.1e-76 | 100.00 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7SL57 | 8.1e-76 | 100.00 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| A0A5D3CLU4 | 8.1e-76 | 100.00 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5D3BDL4 | 8.1e-76 | 100.00 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A5A7TZB1 | 8.1e-76 | 100.00 | CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
