Cmc08g0232931 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0232931
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 30056938 .. 30058513 (+)
RNA-Seq Expression	Cmc08g0232931
Synteny	Cmc08g0232931

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGAGGTTCAAGGATTTGATTATGCAGATGCGGGAGCTGCAACAGCAGCCTGTCCCGCCAGCTCCTGCTCCTGCTCCGGCTCCAGTTCCAGTTGTGCCCCAGGTCGTGCCGGATCACTTGTCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTTGGTTTAGCAGGTTATTATCGAGGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGAGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACATTTTCCAGATCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGACGCTTCCAAGAAAGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTAGCTTATGCTTCGCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTATTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGTTTGAAATACTTCTTTACTAAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGACTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCATATTCAACAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACGTTGAGGCAAAGGATCATTGATGCTCAGCGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGTAGAGGCAGGGCAAGTAGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGTGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCAAGAATTCTGAGGGGTTTTACAGTGATTTGGGTTATGGTGGACAGACTTACCAAATCAGCGCACTTCGTCCCGAGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTATATGTCTAAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTGTGATAGAGATGCCCGTTTCACTTCAAAATTCTGTAAGGATTTGCAAACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCATAG

mRNA sequence

ATGGAGCAGAGCCTGTCCCGCCAGCTCCTGCTCCTGCTCCGGCTCCAGTTCCAGTTGTGCCCCAGGTCGTGCCGGATCACTTGTCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTTGGTTTAGCAGGTTATTATCGAGGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGAGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACATTTTCCAGATCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGACGCTTCCAAGAAAGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTAGCTTATGCTTCGCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTATTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGTTTGAAATACTTCTTTACTAAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGACTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCATATTCAACAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACGTTGAGGCAAAGGATCATTGATGCTCAGCGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGTAGAGGCAGGGCAAGTAGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGTGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCAAGAATTCTGAGGGGTTTTACAGTGATTTGGGTTATGGTGGACAGACTTACCAAATCAGCGCACTTCGTCCCGAGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTATATGTCTAAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTGTGATAGAGATGCCCGTTTCACTTCAAAATTCTGTAAGGATTTGCAAACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCATAG

Coding sequence (CDS)

ATGGAGCAGAGCCTGTCCCGCCAGCTCCTGCTCCTGCTCCGGCTCCAGTTCCAGTTGTGCCCCAGGTCGTGCCGGATCACTTGTCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTTGGTTTAGCAGGTTATTATCGAGGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGAAAGAGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACATTTTCCAGATCCTTAAACAGAAGCTAGTTACCGCACCGGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGACGCTTCCAAGAAAGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTAGCTTATGCTTCGCGTCAGTTGAAGAGTCATGAGCAGAATTACCCTACACACGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTGAAAATATGGAGGCATTATTTGTATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGTTTGAAATACTTCTTTACTAAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGACTGTGAGATACTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCATATTCAACAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACGTTGAGGCAAAGGATCATTGATGCTCAGCGTAACGATCCTTATTTGGTTGAGAAGCGTGGCCTAGTAGAGGCAGGGCAAGTAGTTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGGCGCCTCTGTGTGCCATCAGATAGTGCGGTTAAAACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGTGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAAATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGGCTGCCAAGAATTCTGAGGGGTTTTACAGTGATTTGGGTTATGGTGGACAGACTTACCAAATCAGCGCACTTCGTCCCGAGTAAATCCACCTATACCGCTAGTAAGTGGGCACAGTTGTATATGTCTAAGATAGTGAGATTACATGGAGTGCCAGTGTCGATTGTTTGTGATAGAGATGCCCGTTTCACTTCAAAATTCTGTAAGGATTTGCAAACTGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCATAG

Protein sequence

MEQSLSRQLLLLLRLQFQLCPRSCRITCLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIATPLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFTKKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHFVPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAFHP

Homology

[Close]

BLAST of Cmc08g0232931 vs. NCBI nr
Match: KAA0067877.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 946.4 bits (2445), Expect = 1.0e-271
Identity = 469/482 (97.30%), Postives = 474/482 (98.34%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPST+SEVRSFLGLAGYYRGFVENFSRIAT
Sbjct: 880  LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTISEVRSFLGLAGYYRGFVENFSRIAT 939

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 940  PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 999

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 1000 QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 1059

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+STALITRQAPLHRDLERA
Sbjct: 1060 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERA 1119

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL
Sbjct: 1120 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 1179

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL
Sbjct: 1180 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 1239

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF
Sbjct: 1240 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 1299

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VPSKSTYTASKWAQLYMS+IVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGT    +   
Sbjct: 1300 VPSKSTYTASKWAQLYMSEIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTSFQATIGM 1359

Query: 509  HP 511
             P
Sbjct: 1360 AP 1361

[Close]

BLAST of Cmc08g0232931 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 924.9 bits (2389), Expect = 3.1e-265
Identity = 461/482 (95.64%), Postives = 466/482 (96.68%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            LKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 1019 LKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 1078

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRK APFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 1079 PLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 1138

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 1139 QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 1198

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+S ALITRQAPLHRDLERA
Sbjct: 1199 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1258

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  EFS+SSDGGLL
Sbjct: 1259 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLL 1318

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLK VYWWRNMKREVAEFVSKCL
Sbjct: 1319 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1378

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR LRGFTVIWV+VDRLTKSAHF
Sbjct: 1379 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1438

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VP KSTYTASKWAQLYMS+IVRLHGVPVSIV DRDARFTSKF K LQTAMGTRLDFSTAF
Sbjct: 1439 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF 1498

Query: 509  HP 511
            HP
Sbjct: 1499 HP 1500

[Close]

BLAST of Cmc08g0232931 vs. NCBI nr
Match: KAA0051368.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 921.0 bits (2379), Expect = 4.5e-264
Identity = 459/482 (95.23%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            L+ VSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 712  LRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 771

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRK APFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 772  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 831

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 832  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 891

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+S ALITRQAPLHRDLERA
Sbjct: 892  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 951

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  EFS+SSDGGLL
Sbjct: 952  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLL 1011

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLK VYWWRNMKREVAEFVSKCL
Sbjct: 1012 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1071

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR LRGFTVIWV+VDRLTKSAHF
Sbjct: 1072 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1131

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VP KSTYTASKWAQLYMS+IVRLHGVPVSIV DRDARFTSKF K LQTAMGTRLDFSTAF
Sbjct: 1132 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF 1191

Query: 509  HP 511
            HP
Sbjct: 1192 HP 1193

[Close]

BLAST of Cmc08g0232931 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 920.6 bits (2378), Expect = 5.8e-264
Identity = 458/482 (95.02%), Postives = 466/482 (96.68%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            LKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 765  LKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 824

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRK APFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 825  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 884

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 885  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 944

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+S ALITRQAPLHRDLERA
Sbjct: 945  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1004

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGL EAGQ VEFS+SSDGGLL
Sbjct: 1005 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 1064

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+K VYWWRNMKREVAEFVS+CL
Sbjct: 1065 FERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCL 1124

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR LRGFTVIWV+VDRLTKSAHF
Sbjct: 1125 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1184

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VP KSTYTASKWAQLYMS+IVRLHGVPVSIV DRDARFTSKF K LQTAMGTRLDFSTAF
Sbjct: 1185 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAF 1244

Query: 509  HP 511
            HP
Sbjct: 1245 HP 1246

[Close]

BLAST of Cmc08g0232931 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 919.1 bits (2374), Expect = 1.7e-263
Identity = 457/482 (94.81%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            LKQVSFLGHVVSK GVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 841  LKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 900

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRK APFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSD SKKGLGCVLM
Sbjct: 901  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKGLGCVLM 960

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 961  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 1020

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+S ALITRQAPLHRDLERA
Sbjct: 1021 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1080

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGL EAGQ VEFS+SSDGGLL
Sbjct: 1081 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 1140

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLK VYWWRNMKREVAEFVS+CL
Sbjct: 1141 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCL 1200

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR LRGFTVIWV+VDRLTKSAHF
Sbjct: 1201 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1260

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VP KSTYT+SKWAQLYMS+IVRLHGVPVSIV DRDARFTSKF K LQT+MGTRLDFSTAF
Sbjct: 1261 VPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTSMGTRLDFSTAF 1320

Query: 509  HP 511
            HP
Sbjct: 1321 HP 1322

[Close]

BLAST of Cmc08g0232931 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-62
Identity = 150/491 (30.55%), Postives = 244/491 (49.69%), Query Frame = 0


Query: 31   QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIATPL 90
            QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R F+   S++  PL
Sbjct: 607  QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666

Query: 91   TQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 150
              L +K   + W+       + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+
Sbjct: 667  NNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQK 726

Query: 151  GK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 210
                    V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 727  HDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

Query: 211  KYFFTKKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPL 270
                T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+
Sbjct: 787  IGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPI 846

Query: 271  HRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSI 330
             +D E   I          + Q+++    + +++    ND  L+    L    + VE +I
Sbjct: 847  PKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENI 906

Query: 331  SSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKRE 390
                GLL   +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ ++++
Sbjct: 907  QLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQ 966

Query: 391  VAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMV 450
            + E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP    G+  ++V+V
Sbjct: 967  IQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNALFVVV 1026

Query: 451  DRLTKSAHFVPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMG 510
            DR +K A  VP   + TA + A+++  +++   G P  I+ D D  FTS+  KD      
Sbjct: 1027 DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYN 1079

[Close]

BLAST of Cmc08g0232931 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-62
Identity = 150/491 (30.55%), Postives = 244/491 (49.69%), Query Frame = 0


Query: 31   QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIATPL 90
            QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R F+   S++  PL
Sbjct: 607  QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666

Query: 91   TQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 150
              L +K   + W+       + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+
Sbjct: 667  NNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQK 726

Query: 151  GK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 210
                    V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 727  HDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

Query: 211  KYFFTKKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPL 270
                T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+
Sbjct: 787  IGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPI 846

Query: 271  HRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSI 330
             +D E   I          + Q+++    + +++    ND  L+    L    + VE +I
Sbjct: 847  PKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENI 906

Query: 331  SSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKRE 390
                GLL   +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ ++++
Sbjct: 907  QLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQ 966

Query: 391  VAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMV 450
            + E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP    G+  ++V+V
Sbjct: 967  IQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNALFVVV 1026

Query: 451  DRLTKSAHFVPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMG 510
            DR +K A  VP   + TA + A+++  +++   G P  I+ D D  FTS+  KD      
Sbjct: 1027 DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYN 1079

[Close]

BLAST of Cmc08g0232931 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-62
Identity = 150/491 (30.55%), Postives = 244/491 (49.69%), Query Frame = 0


Query: 31   QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIATPL 90
            QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R F+   S++  PL
Sbjct: 607  QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666

Query: 91   TQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 150
              L +K   + W+       + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+
Sbjct: 667  NNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQK 726

Query: 151  GK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 210
                    V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 727  HDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

Query: 211  KYFFTKKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPL 270
                T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+
Sbjct: 787  IGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPI 846

Query: 271  HRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSI 330
             +D E   I          + Q+++    + +++    ND  L+    L    + VE +I
Sbjct: 847  PKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENI 906

Query: 331  SSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKRE 390
                GLL   +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ ++++
Sbjct: 907  QLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQ 966

Query: 391  VAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMV 450
            + E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP    G+  ++V+V
Sbjct: 967  IQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNALFVVV 1026

Query: 451  DRLTKSAHFVPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMG 510
            DR +K A  VP   + TA + A+++  +++   G P  I+ D D  FTS+  KD      
Sbjct: 1027 DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYN 1079

[Close]

BLAST of Cmc08g0232931 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-62
Identity = 150/491 (30.55%), Postives = 244/491 (49.69%), Query Frame = 0


Query: 31   QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIATPL 90
            QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R F+   S++  PL
Sbjct: 607  QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666

Query: 91   TQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 150
              L +K   + W+       + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+
Sbjct: 667  NNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQK 726

Query: 151  GK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 210
                    V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 727  HDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

Query: 211  KYFFTKKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPL 270
                T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+
Sbjct: 787  IGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPI 846

Query: 271  HRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSI 330
             +D E   I          + Q+++    + +++    ND  L+    L    + VE +I
Sbjct: 847  PKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENI 906

Query: 331  SSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKRE 390
                GLL   +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ ++++
Sbjct: 907  QLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQ 966

Query: 391  VAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMV 450
            + E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP    G+  ++V+V
Sbjct: 967  IQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNALFVVV 1026

Query: 451  DRLTKSAHFVPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMG 510
            DR +K A  VP   + TA + A+++  +++   G P  I+ D D  FTS+  KD      
Sbjct: 1027 DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYN 1079

[Close]

BLAST of Cmc08g0232931 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.5e-62
Identity = 150/491 (30.55%), Postives = 244/491 (49.69%), Query Frame = 0


Query: 31   QVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIATPL 90
            QV F+G+ +S+ G +     I+ V  W +P    E+R FLG   Y R F+   S++  PL
Sbjct: 607  QVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPL 666

Query: 91   TQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQ 150
              L +K   + W+       + +KQ LV+ PVL   D S   ++ +DAS   +G VL Q+
Sbjct: 667  NNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQK 726

Query: 151  GK-----VVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYG--EKIQIFTDHKSL 210
                    V Y S ++   + NY   D E+ A++ +LK WRHYL    E  +I TDH++L
Sbjct: 727  HDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNL 786

Query: 211  KYFFTKKE--LNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPL 270
                T +    N R  RW   ++D++ EI Y PG AN +ADALSR       ++    P+
Sbjct: 787  IGRITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPI 846

Query: 271  HRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSI 330
             +D E   I          + Q+++    + +++    ND  L+    L    + VE +I
Sbjct: 847  PKDSEDNSINF--------VNQISITDDFKNQVVTEYTNDTKLLNL--LNNEDKRVEENI 906

Query: 331  SSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKRE 390
                GLL   +  + +P+D+ +   ++ + H     +HPG   +   +   + W+ ++++
Sbjct: 907  QLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGKLIHPGIELLTNIILRRFTWKGIRKQ 966

Query: 391  VAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMV 450
            + E+V  C  CQ  K+   KP G LQP+   E  WE++SMDFIT LP    G+  ++V+V
Sbjct: 967  IQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPE-SSGYNALFVVV 1026

Query: 451  DRLTKSAHFVPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMG 510
            DR +K A  VP   + TA + A+++  +++   G P  I+ D D  FTS+  KD      
Sbjct: 1027 DRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYN 1079

[Close]

BLAST of Cmc08g0232931 vs. ExPASy TrEMBL
Match: A0A5A7VKY9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00310 PE=4 SV=1)

HSP 1 Score: 946.4 bits (2445), Expect = 4.8e-272
Identity = 469/482 (97.30%), Postives = 474/482 (98.34%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPST+SEVRSFLGLAGYYRGFVENFSRIAT
Sbjct: 880  LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTISEVRSFLGLAGYYRGFVENFSRIAT 939

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 940  PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 999

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 1000 QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 1059

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+STALITRQAPLHRDLERA
Sbjct: 1060 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSTALITRQAPLHRDLERA 1119

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL
Sbjct: 1120 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 1179

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL
Sbjct: 1180 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 1239

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF
Sbjct: 1240 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 1299

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VPSKSTYTASKWAQLYMS+IVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGT    +   
Sbjct: 1300 VPSKSTYTASKWAQLYMSEIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTSFQATIGM 1359

Query: 509  HP 511
             P
Sbjct: 1360 AP 1361

[Close]

BLAST of Cmc08g0232931 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 924.9 bits (2389), Expect = 1.5e-265
Identity = 461/482 (95.64%), Postives = 466/482 (96.68%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            LKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 1019 LKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 1078

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRK APFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 1079 PLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 1138

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 1139 QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 1198

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+S ALITRQAPLHRDLERA
Sbjct: 1199 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1258

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  EFS+SSDGGLL
Sbjct: 1259 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLL 1318

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLK VYWWRNMKREVAEFVSKCL
Sbjct: 1319 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1378

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR LRGFTVIWV+VDRLTKSAHF
Sbjct: 1379 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1438

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VP KSTYTASKWAQLYMS+IVRLHGVPVSIV DRDARFTSKF K LQTAMGTRLDFSTAF
Sbjct: 1439 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF 1498

Query: 509  HP 511
            HP
Sbjct: 1499 HP 1500

[Close]

BLAST of Cmc08g0232931 vs. ExPASy TrEMBL
Match: A0A5A7U7V9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00950 PE=4 SV=1)

HSP 1 Score: 921.0 bits (2379), Expect = 2.2e-264
Identity = 459/482 (95.23%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            L+ VSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 712  LRMVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 771

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRK APFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 772  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 831

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 832  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 891

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+S ALITRQAPLHRDLERA
Sbjct: 892  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 951

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGL EAGQ  EFS+SSDGGLL
Sbjct: 952  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQTAEFSLSSDGGLL 1011

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLK VYWWRNMKREVAEFVSKCL
Sbjct: 1012 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSKCL 1071

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR LRGFTVIWV+VDRLTKSAHF
Sbjct: 1072 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1131

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VP KSTYTASKWAQLYMS+IVRLHGVPVSIV DRDARFTSKF K LQTAMGTRLDFSTAF
Sbjct: 1132 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTAMGTRLDFSTAF 1191

Query: 509  HP 511
            HP
Sbjct: 1192 HP 1193

[Close]

BLAST of Cmc08g0232931 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 920.6 bits (2378), Expect = 2.8e-264
Identity = 458/482 (95.02%), Postives = 466/482 (96.68%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            LKQVSFLGHVVSKAGVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 765  LKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 824

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRK APFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM
Sbjct: 825  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 884

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 885  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 944

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+S ALITRQAPLHRDLERA
Sbjct: 945  QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1004

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGL EAGQ VEFS+SSDGGLL
Sbjct: 1005 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 1064

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+D+K VYWWRNMKREVAEFVS+CL
Sbjct: 1065 FERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYRDVKRVYWWRNMKREVAEFVSRCL 1124

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR LRGFTVIWV+VDRLTKSAHF
Sbjct: 1125 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1184

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VP KSTYTASKWAQLYMS+IVRLHGVPVSIV DRDARFTSKF K LQTAMGTRLDFSTAF
Sbjct: 1185 VPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKSLQTAMGTRLDFSTAF 1244

Query: 509  HP 511
            HP
Sbjct: 1245 HP 1246

[Close]

BLAST of Cmc08g0232931 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 919.1 bits (2374), Expect = 8.2e-264
Identity = 457/482 (94.81%), Postives = 465/482 (96.47%), Query Frame = 0


Query: 29   LKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 88
            LKQVSFLGHVVSK GVSVDPAKIEAVT WTRPSTVSEVRSFLGLAGYYR FVENFSRIAT
Sbjct: 841  LKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIAT 900

Query: 89   PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLM 148
            PLTQLTRK APFVWSKACED FQ LKQKLVTAPVLTVPDGSGSFVIYSD SKKGLGCVLM
Sbjct: 901  PLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSDTSKKGLGCVLM 960

Query: 149  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 208
            QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT
Sbjct: 961  QQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFTDHKSLKYFFT 1020

Query: 209  KKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSYSTALITRQAPLHRDLERA 268
            +KELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVS+S ALITRQAPLHRDLERA
Sbjct: 1021 QKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDLERA 1080

Query: 269  EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQRNDPYLVEKRGLVEAGQVVEFSISSDGGLL 328
            EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLVEKRGL EAGQ VEFS+SSDGGLL
Sbjct: 1081 EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEAGQAVEFSLSSDGGLL 1140

Query: 329  FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKWVYWWRNMKREVAEFVSKCL 388
            FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLK VYWWRNMKREVAEFVS+CL
Sbjct: 1141 FERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCL 1200

Query: 389  VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRILRGFTVIWVMVDRLTKSAHF 448
            VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPR LRGFTVIWV+VDRLTKSAHF
Sbjct: 1201 VCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHF 1260

Query: 449  VPSKSTYTASKWAQLYMSKIVRLHGVPVSIVCDRDARFTSKFCKDLQTAMGTRLDFSTAF 508
            VP KSTYT+SKWAQLYMS+IVRLHGVPVSIV DRDARFTSKF K LQT+MGTRLDFSTAF
Sbjct: 1261 VPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDARFTSKFWKGLQTSMGTRLDFSTAF 1320

Query: 509  HP 511
            HP
Sbjct: 1321 HP 1322

[Close]

BLAST of Cmc08g0232931 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 2.6e-20
Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 0


Query: 31  QVSFLG--HVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYRGFVENFSRIAT 90
           Q+++LG  H++S  GVS DPAK+EA+  W  P   +E+R FLGL GYYR FV+N+ +I  
Sbjct: 29  QIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKNTTELRGFLGLTGYYRRFVKNYGKIVR 88

Query: 91  PLTQLTRKRAPFVWSKACEDIFQILKQKLVTAPVLTVPDGSGSFV 134
           PLT+L +K +   W++     F+ LK  + T PVL +PD    FV
Sbjct: 89  PLTELLKKNS-LKWTEMAALAFKALKGAVTTLPVLALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc08g0232931 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067877.1	1.0e-271	97.30	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	3.1e-265	95.64	pol protein [Cucumis melo var. makuwa]	[more]
KAA0051368.1	4.5e-264	95.23	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	5.8e-264	95.02	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062112.1	1.7e-263	94.81	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0232931 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	3.5e-62	30.55	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	3.5e-62	30.55	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.5e-62	30.55	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.5e-62	30.55	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.5e-62	30.55	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0232931 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VKY9	4.8e-272	97.30	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]
A0A5D3BPI1	1.5e-265	95.64	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7U7V9	2.2e-264	95.23	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55...	[more]
A0A5A7U330	2.8e-264	95.02	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7V1N3	8.2e-264	94.81	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]

BLAST of Cmc08g0232931 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.6e-20	44.76	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 49..134 e-value: 2.8E-29 score: 103.0
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 130..226 e-value: 1.9E-34 score: 118.1
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 339..395 e-value: 2.4E-16 score: 59.5
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 403..510 e-value: 2.1E-20 score: 74.8
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 135..256 e-value: 4.3E-5 score: 25.3
None	No IPR available	GENE3D	1.10.340.70		coord: 306..394 e-value: 2.9E-17 score: 64.7
None	No IPR available	PANTHER	PTHR24559:SF355	PROTEIN, PUTATIVE-RELATED	coord: 46..247
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 46..247
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 133..248 e-value: 2.58293E-60 score: 192.322
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 406..510 score: 10.558599
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 26..232
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 407..510

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0232931.1	Cmc08g0232931.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0043227	membrane-bounded organelle
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding