Cmc08g0232681 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0232681
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr08: 29672777 .. 29673202 (-)
RNA-Seq Expression	Cmc08g0232681
Synteny	Cmc08g0232681

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTGATGACATGATTATTATAGGGGATAACCCTCAAACCATATCTGATTTGCAATGTTACCTGAGTAAGCACTTTGAGAAGAAGGATCTAGGCACCCTAAACTATTTTCTTGGTCTTGAGATCTTATCCTCGTCTAATGACTACTACTTATCTCAAGCAAAATATGCATCTGACCTCCTTAGTCGATCTAGTATTACTGACTCTATCACATCCTCAACACCTCTGGATCCAAATGTGCGACTCACTCCTTTTGATGGTGTTCTTCTTGACGATTCCACTTTGTATCGGAAACTTGTTGACAGCCTGATTTACTTAACTGTGACCCGCCTAAATATTACATATGTAGTTCACATTGTTAGTCAATTCATGGTTGCTCCTCGTACTATTCACTTCACTGTTTTCCTTCATATTGCATTATATTAA

mRNA sequence

ATGTTTGATGACATGATTATTATAGGGGATAACCCTCAAACCATATCTGATTTGCAATGTTACCTGAGTAAGCACTTTGAGAAGAAGGATCTAGGCACCCTAAACTATTTTCTTGGTCTTGAGATCTTATCCTCGTCTAATGACTACTACTTATCTCAAGCAAAATATGCATCTGACCTCCTTAGTCGATCTAGTATTACTGACTCTATCACATCCTCAACACCTCTGGATCCAAATGTGCGACTCACTCCTTTTGATGGTGTTCTTCTTGACGATTCCACTTTGTATCGGAAACTTGTTGACAGCCTGATTTACTTAACTGTGACCCGCCTAAATATTACATATGTAGTTCACATTGTTAGTCAATTCATGGTTGCTCCTCGTACTATTCACTTCACTGTTTTCCTTCATATTGCATTATATTAA

Coding sequence (CDS)

ATGTTTGATGACATGATTATTATAGGGGATAACCCTCAAACCATATCTGATTTGCAATGTTACCTGAGTAAGCACTTTGAGAAGAAGGATCTAGGCACCCTAAACTATTTTCTTGGTCTTGAGATCTTATCCTCGTCTAATGACTACTACTTATCTCAAGCAAAATATGCATCTGACCTCCTTAGTCGATCTAGTATTACTGACTCTATCACATCCTCAACACCTCTGGATCCAAATGTGCGACTCACTCCTTTTGATGGTGTTCTTCTTGACGATTCCACTTTGTATCGGAAACTTGTTGACAGCCTGATTTACTTAACTGTGACCCGCCTAAATATTACATATGTAGTTCACATTGTTAGTCAATTCATGGTTGCTCCTCGTACTATTCACTTCACTGTTTTCCTTCATATTGCATTATATTAA

Protein sequence

MFDDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQFMVAPRTIHFTVFLHIALY

Homology

[Close]

BLAST of Cmc08g0232681 vs. NCBI nr
Match: XP_016903222.1 (PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo])

HSP 1 Score: 252.7 bits (644), Expect = 1.9e-63
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 7   IIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 66
           + GDNPQ ISDLQCYL KHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI
Sbjct: 38  LYGDNPQAISDLQCYLGKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 97

Query: 67  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQFMVA 126
           TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQFMVA
Sbjct: 98  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQFMVA 157

Query: 127 PRTIHFTVFLHIALY 142
           PRTIHFTVFLHIALY
Sbjct: 158 PRTIHFTVFLHIALY 172

[Close]

BLAST of Cmc08g0232681 vs. NCBI nr
Match: KAA0067911.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 213.4 bits (542), Expect = 1.3e-51
Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 7   IIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 66
           + GDNPQ ISDLQCYL KHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI
Sbjct: 38  LYGDNPQAISDLQCYLGKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 97

Query: 67  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV 121
           TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV
Sbjct: 98  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV 151

[Close]

BLAST of Cmc08g0232681 vs. NCBI nr
Match: TYK04303.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 211.1 bits (536), Expect = 6.3e-51
Identity = 109/114 (95.61%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 7   IIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 66
           + GDNPQ I DLQCYL KHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI
Sbjct: 38  LYGDNPQAIYDLQCYLGKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 97

Query: 67  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV 121
           TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV
Sbjct: 98  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV 151

[Close]

BLAST of Cmc08g0232681 vs. NCBI nr
Match: KAA0041166.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 110/139 (79.14%), Postives = 118/139 (84.89%), Query Frame = 0


Query: 3   DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
           DDMII GD+PQ ISDLQCYL KHFE KDLG LNYFLGLEI SSS+ YYLSQAKYASDL++
Sbjct: 612 DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLVN 671

Query: 63  RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
           RS ITDS T STPLDPNVRLTPFDGV L+D TLYR+LV SLIYLTVTR +I Y +HIVSQ
Sbjct: 672 RSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAIHIVSQ 731

Query: 123 FMVAPRTIHFTVFLHIALY 142
           FM APRTIHFTV L I  Y
Sbjct: 732 FMAAPRTIHFTVVLRILRY 750

[Close]

BLAST of Cmc08g0232681 vs. NCBI nr
Match: KAA0043149.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] >TYK22647.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 209.5 bits (532), Expect = 1.8e-50
Identity = 111/139 (79.86%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 3    DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
            DDMII GD+PQ ISDLQCYL KHFE KDLG LNYFLGLEI SSS+ YYLSQAKYASDLL+
Sbjct: 1032 DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLN 1091

Query: 63   RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
            RS ITDS T STPLDPNVRLTPFDGV L+D TLYR+LV SLIYLTVTR +I Y VHIVSQ
Sbjct: 1092 RSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQ 1151

Query: 123  FMVAPRTIHFTVFLHIALY 142
            FM APRTIHFT  L I  Y
Sbjct: 1152 FMAAPRTIHFTAVLRILRY 1170

[Close]

BLAST of Cmc08g0232681 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 2.6e-15
Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = 0


Query: 3    DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
            DD++I G++P  + +    LS+ F  KD   L+YFLG+E        +LSQ +Y  DLL+
Sbjct: 1152 DDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRYILDLLA 1211

Query: 63   RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
            R+++  +   +TP+ P+ +L+ + G  L D T YR +V SL YL  TR +I+Y V+ +SQ
Sbjct: 1212 RTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYAVNRLSQ 1271

Query: 123  FMVAPRTIHFTVFLHIALY 142
            FM  P   H      I  Y
Sbjct: 1272 FMHMPTEEHLQALKRILRY 1290

[Close]

BLAST of Cmc08g0232681 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.1e-12
Identity = 47/139 (33.81%), Postives = 76/139 (54.68%), Query Frame = 0


Query: 3    DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
            DD++I G++   +      LS+ F  K+   L+YFLG+E        +LSQ +Y  DLL+
Sbjct: 1135 DDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLA 1194

Query: 63   RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
            R+++  +   +TP+  + +LT   G  L D T YR +V SL YL  TR +++Y V+ +SQ
Sbjct: 1195 RTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQ 1254

Query: 123  FMVAPRTIHFTVFLHIALY 142
            +M  P   H+     +  Y
Sbjct: 1255 YMHMPTDDHWNALKRVLRY 1273

[Close]

BLAST of Cmc08g0232681 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 6.0e-12
Identity = 48/139 (34.53%), Postives = 76/139 (54.68%), Query Frame = 0


Query: 3   DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
           DD+++ G +   ++ L   LS  F  KDLG ++YFLG++I +  +  +LSQ KYA  +L+
Sbjct: 8   DDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILN 67

Query: 63  RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
            + + D    STPL   +  +       D S  +R +V +L YLT+TR +I+Y V+IV Q
Sbjct: 68  NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD-FRSIVGALQYLTLTRPDISYAVNIVCQ 127

Query: 123 FMVAPRTIHFTVFLHIALY 142
            M  P    F +   +  Y
Sbjct: 128 RMHEPTLADFDLLKRVLRY 145

[Close]

BLAST of Cmc08g0232681 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 59.3 bits (142), Expect = 4.0e-08
Identity = 45/131 (34.35%), Postives = 69/131 (52.67%), Query Frame = 0


Query: 3   DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSN-DYYLSQAKYASDLL 62
           DD+++   +P+    ++  L+K +  KDLG ++ FLGL I  SSN D  LS   Y +   
Sbjct: 89  DDLLVAAPSPKIYDRVKQELTKLYSMKDLGKVDKFLGLNIHQSSNGDITLSLQDYIAKAA 148

Query: 63  SRSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVT-RLNITYVVHIV 122
           S S I     + TPL  +  L       L D T Y+ +V  L++   T R +I+Y V ++
Sbjct: 149 SESEINTFKLTQTPLCNSKPLFETTSPHLKDITPYQSIVGQLLFCANTGRPDISYPVSLL 208

Query: 123 SQFMVAPRTIH 132
           S+F+  PR IH
Sbjct: 209 SRFLREPRAIH 219

[Close]

BLAST of Cmc08g0232681 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-05
Identity = 34/122 (27.87%), Postives = 66/122 (54.10%), Query Frame = 0


Query: 3    DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
            DD++I   +   +++ + YL + F   DL  + +F+G+ I    +  YLSQ+ Y   +LS
Sbjct: 1089 DDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILS 1148

Query: 63   RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTV-TRLNITYVVHIVS 122
            + ++ +    STPL   +     +    D +T  R L+  L+Y+ + TR ++T  V+I+S
Sbjct: 1149 KFNMENCNAVSTPLPSKINYELLNSD-EDCNTPCRSLIGCLMYIMLCTRPDLTTAVNILS 1208

Query: 123  QF 124
            ++
Sbjct: 1209 RY 1209

[Close]

BLAST of Cmc08g0232681 vs. ExPASy TrEMBL
Match: A0A1S4E4S2 (uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=LOC107992083 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 9.2e-64
Identity = 131/135 (97.04%), Postives = 132/135 (97.78%), Query Frame = 0


Query: 7   IIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 66
           + GDNPQ ISDLQCYL KHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI
Sbjct: 38  LYGDNPQAISDLQCYLGKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 97

Query: 67  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQFMVA 126
           TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQFMVA
Sbjct: 98  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQFMVA 157

Query: 127 PRTIHFTVFLHIALY 142
           PRTIHFTVFLHIALY
Sbjct: 158 PRTIHFTVFLHIALY 172

[Close]

BLAST of Cmc08g0232681 vs. ExPASy TrEMBL
Match: A0A5A7VQM0 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G00770 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 6.2e-52
Identity = 110/114 (96.49%), Postives = 111/114 (97.37%), Query Frame = 0


Query: 7   IIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 66
           + GDNPQ ISDLQCYL KHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI
Sbjct: 38  LYGDNPQAISDLQCYLGKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 97

Query: 67  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV 121
           TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV
Sbjct: 98  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV 151

[Close]

BLAST of Cmc08g0232681 vs. ExPASy TrEMBL
Match: A0A5D3BX42 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold527G00320 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 3.1e-51
Identity = 109/114 (95.61%), Postives = 110/114 (96.49%), Query Frame = 0


Query: 7   IIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 66
           + GDNPQ I DLQCYL KHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI
Sbjct: 38  LYGDNPQAIYDLQCYLGKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLSRSSI 97

Query: 67  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV 121
           TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV
Sbjct: 98  TDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIV 151

[Close]

BLAST of Cmc08g0232681 vs. ExPASy TrEMBL
Match: A0A5D3DG18 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold195G00850 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.9e-51
Identity = 111/139 (79.86%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 3    DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
            DDMII GD+PQ ISDLQCYL KHFE KDLG LNYFLGLEI SSS+ YYLSQAKYASDLL+
Sbjct: 1032 DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLN 1091

Query: 63   RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
            RS ITDS T STPLDPNVRLTPFDGV L+D TLYR+LV SLIYLTVTR +I Y VHIVSQ
Sbjct: 1092 RSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQ 1151

Query: 123  FMVAPRTIHFTVFLHIALY 142
            FM APRTIHFT  L I  Y
Sbjct: 1152 FMAAPRTIHFTAVLRILRY 1170

[Close]

BLAST of Cmc08g0232681 vs. ExPASy TrEMBL
Match: A0A5D3DWU7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold289G00160 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 8.9e-51
Identity = 111/139 (79.86%), Postives = 117/139 (84.17%), Query Frame = 0


Query: 3   DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
           DDMII GD+PQ ISDLQCYL KHFE KDLG LNYFLGLEI SSS+ YYLSQAKYASDLL+
Sbjct: 448 DDMIITGDDPQAISDLQCYLGKHFEMKDLGNLNYFLGLEISSSSSGYYLSQAKYASDLLN 507

Query: 63  RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
           RS ITDS T STPLDPNVRLTPFDGV L+D TLYR+LV SLIYLTVTR +I Y VHIVSQ
Sbjct: 508 RSGITDSATFSTPLDPNVRLTPFDGVPLEDPTLYRQLVGSLIYLTVTRPDIAYAVHIVSQ 567

Query: 123 FMVAPRTIHFTVFLHIALY 142
           FM APRTIHFT  L I  Y
Sbjct: 568 FMAAPRTIHFTAVLRILRY 586

[Close]

BLAST of Cmc08g0232681 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 93.6 bits (231), Expect = 1.4e-19
Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 0


Query: 3   DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
           DD+II  +N   + +L+  L   F+ +DLG L YFLGLEI  S+    + Q KYA DLL 
Sbjct: 285 DDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLD 344

Query: 63  RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
            + +     SS P+DP+V  +   G    D+  YR+L+  L+YL +TRL+I++ V+ +SQ
Sbjct: 345 ETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQ 404

Query: 123 FMVAPRTIHFTVFLHIALY 142
           F  APR  H    + I  Y
Sbjct: 405 FSEAPRLAHQQAVMKILHY 423

[Close]

BLAST of Cmc08g0232681 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 4.3e-13
Identity = 48/139 (34.53%), Postives = 76/139 (54.68%), Query Frame = 0


Query: 3   DDMIIIGDNPQTISDLQCYLSKHFEKKDLGTLNYFLGLEILSSSNDYYLSQAKYASDLLS 62
           DD+++ G +   ++ L   LS  F  KDLG ++YFLG++I +  +  +LSQ KYA  +L+
Sbjct: 8   DDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQILN 67

Query: 63  RSSITDSITSSTPLDPNVRLTPFDGVLLDDSTLYRKLVDSLIYLTVTRLNITYVVHIVSQ 122
            + + D    STPL   +  +       D S  +R +V +L YLT+TR +I+Y V+IV Q
Sbjct: 68  NAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSD-FRSIVGALQYLTLTRPDISYAVNIVCQ 127

Query: 123 FMVAPRTIHFTVFLHIALY 142
            M  P    F +   +  Y
Sbjct: 128 RMHEPTLADFDLLKRVLRY 145

The following BLAST results are available for this feature:

BLAST of Cmc08g0232681 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016903222.1	1.9e-63	97.04	PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Cucumis melo]	[more]
KAA0067911.1	1.3e-51	96.49	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
TYK04303.1	6.3e-51	95.61	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0041166.1	1.8e-50	79.14	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0043149.1	1.8e-50	79.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc08g0232681 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	2.6e-15	37.41	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.1e-12	33.81	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	6.0e-12	34.53	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P25600	4.0e-08	34.35	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]
P04146	3.2e-05	27.87	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc08g0232681 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E4S2	9.2e-64	97.04	uncharacterized mitochondrial protein AtMg00810-like OS=Cucumis melo OX=3656 GN=...	[more]
A0A5A7VQM0	6.2e-52	96.49	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3BX42	3.1e-51	95.61	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A5D3DG18	8.9e-51	79.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3DWU7	8.9e-51	79.86	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc08g0232681 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.4e-19	39.57	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	4.3e-13	34.53	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 3..76 e-value: 3.2E-13 score: 49.8
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 28..135
None	No IPR available	PANTHER	PTHR11439:SF313	SUBFAMILY NOT NAMED	coord: 28..135

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0232681.1	Cmc08g0232681.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding