Cmc08g0232371 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0232371
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 29047912 .. 29049934 (+)
RNA-Seq Expression	Cmc08g0232371
Synteny	Cmc08g0232371

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCTTTGCCCAGGATCGACGATCTATTTGACCAGTTGCAGGGAGCCACGGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAACATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTTAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCAGTTCTTACTGTACCTGATGGTCCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGATGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGACAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGATGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGTAGGGCAAGCGGCTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAACATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGAGGTTTTACAGTGATTTGGGTTGTGGTGGACAAACTTACCAAATCAGCGCACTTCGTCCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATATCTGAGATAGTGAGATTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCTGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACGGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGGTAGCTGGGACTCCCACTTACATTTGATGGAATTTGCTTATAATAACAGTTATCAGGCTACTATTGGCATGA

mRNA sequence

ATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCTTTGCCCAGGATCGACGATCTATTTGACCAGTTGCAGGGAGCCACGGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAACATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCAGTTCTTACTGTACCTGATGGTCCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGATGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGACAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGATGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGTAGGGCAAGCGGCTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAACATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGAGGTTTTACAGTGATTTGGGTTGTGGTGGACAAACTTACCAAATCAGCGCACTTCGTCCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATATCTGAGATAGTGAGATTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCTGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACGGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGTTATCAGGCTACTATTGGCATGA

Coding sequence (CDS)

ATGCGTCTATGCATTGACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCTTTGCCCAGGATCGACGATCTATTTGACCAGTTGCAGGGAGCCACGGTGTTCTCTAAGATTGATCTTCGGTCGGGATACCATCAGCTGAGGATTAAGGATGGTGATGTACCAAAGACAACATTTCGTTCCAGGTATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATCGACGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTGGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCAGTTCTTACTGTACCTGATGGTCCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCGTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCGGTGGTTTTTGCTTTGAAAATATGGAGGCATTACTTATATGATGAAAAGATACAGATATTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAAGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGACAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGATGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCAAAGGATCATTGATGCTCAGAGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGTAGGGCAAGCGGCTGAGTTCTCCATATCCTCTGATGGTGGACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTGAGGCTCACAGTTCCCCATTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCGGGTTTATTACAACCCTTGAACATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGAGGTTTTACAGTGATTTGGGTTGTGGTGGACAAACTTACCAAATCAGCGCACTTCGTCCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATATCTGAGATAGTGAGATTACACGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCTGTTTCACTTCCAAATTCTGGAAGGGTTTGCAGACGGCTATGGGCACGAGGTTAGACTTTAGTACAGCTTTCCATCCACAGACTGACGGTCAGACTGAGCGTCTGAACCAAGTTTTAGAGGATATGTTGCGAGCGTGTGCATTGGAATTTCCAGTTATCAGGCTACTATTGGCATGA

Protein sequence

MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTTFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALSRKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLVEKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDACFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFPVIRLLLA

Homology

[Close]

BLAST of Cmc08g0232371 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 610/650 (93.85%), Postives = 616/650 (94.77%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLA                        APFVWSKACEDSFQ LKQKLVTAPVLTV
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
            RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAE GQ AEFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1355

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
            DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGL
Sbjct: 1356 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1415

Query: 541  PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
            PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLY+SEIVRLHGVPVSIVSDRDA 
Sbjct: 1416 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1475

Query: 601  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
            FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1476 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1525

[Close]

BLAST of Cmc08g0232371 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 607/650 (93.38%), Postives = 614/650 (94.46%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 698  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 757

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE H
Sbjct: 758  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENH 817

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 818  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSE 877

Query: 181  VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLA                        APFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 878  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 937

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDG GSFVIYSD SKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 938  PDGSGSFVIYSDTSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 997

Query: 301  RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
            RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 998  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1057

Query: 361  RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 1058 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1117

Query: 421  EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAE GQA EFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1118 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1177

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
            DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGL
Sbjct: 1178 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1237

Query: 541  PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
            PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYT+SKWAQLY+SEIVRLHGVPVSIVSDRDA 
Sbjct: 1238 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDAR 1297

Query: 601  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
            FTSKFWKGLQT+MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1298 FTSKFWKGLQTSMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1347

[Close]

BLAST of Cmc08g0232371 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 607/650 (93.38%), Postives = 614/650 (94.46%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLA                        APFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
            RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAE GQA EFS+SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
            D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

Query: 541  PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
            PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLY+SEIVRLHGVPVSIVSDRDA 
Sbjct: 1162 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1221

Query: 601  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
            FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFP
Sbjct: 1222 FTSKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFP 1271

[Close]

BLAST of Cmc08g0232371 vs. NCBI nr
Match: KAA0026271.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 606/650 (93.23%), Postives = 612/650 (94.15%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT 
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLA                        APFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
           PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 490

Query: 301 RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
           RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 491 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 550

Query: 361 RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
           RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLV
Sbjct: 551 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLV 610

Query: 421 EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
           EKR LAE GQA EFS+SSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 611 EKRSLAEAGQAVEFSLSSDGGLLFERCLCVPSDSAAKTELLSEAHSSPFSMHPGSTKMYQ 670

Query: 481 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
           DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPL+IPEWKWENVSMDFITGL
Sbjct: 671 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPVGLLQPLSIPEWKWENVSMDFITGL 730

Query: 541 PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
           PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLY+SEIVRLH VPVSIVSD+DA 
Sbjct: 731 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHEVPVSIVSDKDAR 790

Query: 601 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
           FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 791 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 840

[Close]

BLAST of Cmc08g0232371 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 605/650 (93.08%), Postives = 614/650 (94.46%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKT 
Sbjct: 140 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTA 199

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 200 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 259

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 260 LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 319

Query: 181 VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLA                        APFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 320 VRSFLGLAGYYRRFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 379

Query: 241 PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
           PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 380 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 439

Query: 301 RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
           RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 440 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 499

Query: 361 RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
           RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 500 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 559

Query: 421 EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
           EKRGLAE GQA EFS+SSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQ
Sbjct: 560 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQ 619

Query: 481 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
           DLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFI GL
Sbjct: 620 DLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGL 679

Query: 541 PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
           PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYT SKWAQLY+SEIVRLHGVPVSIVSDRDA 
Sbjct: 680 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAR 739

Query: 601 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
           FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFP
Sbjct: 740 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNKVLEDMLRACALEFP 789

[Close]

BLAST of Cmc08g0232371 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.0e-103
Identity = 218/661 (32.98%), Postives = 351/661 (53.10%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLG--------------LAAP----------FVWSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG              L  P          + W+     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYD--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPDK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
            AN +ADALSR       ++    P+ +D E + I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEVGQAAEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    +  E +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGV 600
            E++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

Query: 601  PVSIVSDRDACFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF 627
            P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      
Sbjct: 1062 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1104

[Close]

BLAST of Cmc08g0232371 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.0e-103
Identity = 218/661 (32.98%), Postives = 351/661 (53.10%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLG--------------LAAP----------FVWSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG              L  P          + W+     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYD--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPDK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
            AN +ADALSR       ++    P+ +D E + I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEVGQAAEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    +  E +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGV 600
            E++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

Query: 601  PVSIVSDRDACFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF 627
            P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      
Sbjct: 1062 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1104

[Close]

BLAST of Cmc08g0232371 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.0e-103
Identity = 218/661 (32.98%), Postives = 351/661 (53.10%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLG--------------LAAP----------FVWSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG              L  P          + W+     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYD--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPDK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
            AN +ADALSR       ++    P+ +D E + I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEVGQAAEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    +  E +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGV 600
            E++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

Query: 601  PVSIVSDRDACFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF 627
            P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      
Sbjct: 1062 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1104

[Close]

BLAST of Cmc08g0232371 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.0e-103
Identity = 218/661 (32.98%), Postives = 351/661 (53.10%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLG--------------LAAP----------FVWSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG              L  P          + W+     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYD--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPDK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
            AN +ADALSR       ++    P+ +D E + I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEVGQAAEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    +  E +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGV 600
            E++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

Query: 601  PVSIVSDRDACFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF 627
            P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      
Sbjct: 1062 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1104

[Close]

BLAST of Cmc08g0232371 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 3.0e-103
Identity = 218/661 (32.98%), Postives = 351/661 (53.10%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            +R+ +DY+ LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K  
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLG--------------LAAP----------FVWSKACEDSFQNLKQKLVTAPVLTV 240
            +R FLG              L  P          + W+     + +N+KQ LV+ PVL  
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGK-----VVAYASRQLKSHEQNYPTHDLELAAVVF 300
             D     ++ +DAS   +G VL Q+        V Y S ++   + NY   D E+ A++ 
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  ALKIWRHYLYD--EKIQIFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPDK 360
            +LK WRHYL    E  +I TDH++L    T +    N R  RW   ++D++ EI Y P  
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIID 420
            AN +ADALSR       ++    P+ +D E + I          + Q+++    + +++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQSNDPYLVEKRGLAEVGQAAEFSISSDGGLLFERR--LCVPSDSAVKTELLSEAHSSPF 480
              +ND  L+    L    +  E +I    GLL   +  + +P+D+ +   ++ + H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGV 600
            E++SMDFIT LP +  G+  ++VVVD+ +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1061

Query: 601  PVSIVSDRDACFTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEF 627
            P  I++D D  FTS+ WK         + FS  + PQTDGQTER NQ +E +LR      
Sbjct: 1062 PKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTH 1104

[Close]

BLAST of Cmc08g0232371 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1220.7 bits (3157), Expect = 0.0e+00
Identity = 610/650 (93.85%), Postives = 616/650 (94.77%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLA                        APFVWSKACEDSFQ LKQKLVTAPVLTV
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
            RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAE GQ AEFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1355

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
            DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGL
Sbjct: 1356 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1415

Query: 541  PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
            PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLY+SEIVRLHGVPVSIVSDRDA 
Sbjct: 1416 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1475

Query: 601  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
            FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1476 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1525

[Close]

BLAST of Cmc08g0232371 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 1216.8 bits (3147), Expect = 0.0e+00
Identity = 607/650 (93.38%), Postives = 614/650 (94.46%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 698  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 757

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE H
Sbjct: 758  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENH 817

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 818  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSE 877

Query: 181  VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLA                        APFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 878  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 937

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDG GSFVIYSD SKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 938  PDGSGSFVIYSDTSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 997

Query: 301  RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
            RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 998  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1057

Query: 361  RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 1058 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1117

Query: 421  EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAE GQA EFS+SSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 1118 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1177

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
            DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGL
Sbjct: 1178 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1237

Query: 541  PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
            PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYT+SKWAQLY+SEIVRLHGVPVSIVSDRDA 
Sbjct: 1238 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDAR 1297

Query: 601  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
            FTSKFWKGLQT+MGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 1298 FTSKFWKGLQTSMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 1347

[Close]

BLAST of Cmc08g0232371 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1214.1 bits (3140), Expect = 0.0e+00
Identity = 607/650 (93.38%), Postives = 614/650 (94.46%), Query Frame = 0


Query: 1    MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
            MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DVPKT 
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
            VRSFLGLA                        APFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
            PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
            RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
            RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
            EKRGLAE GQA EFS+SSDGGLLFERRLCVPSDS VKTELLSEAHSSPFSMHPGSTKMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
            D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

Query: 541  PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
            PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLY+SEIVRLHGVPVSIVSDRDA 
Sbjct: 1162 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1221

Query: 601  FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
            FTSKFWK LQTAMGTRLDFSTAFHPQTDGQTERLNQVLE MLRACALEFP
Sbjct: 1222 FTSKFWKSLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEYMLRACALEFP 1271

[Close]

BLAST of Cmc08g0232371 vs. ExPASy TrEMBL
Match: A0A5A7SPZ2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE=4 SV=1)

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 606/650 (93.23%), Postives = 612/650 (94.15%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKT 
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLA                        APFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
           PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 490

Query: 301 RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
           RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 491 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 550

Query: 361 RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
           RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQ NDPYLV
Sbjct: 551 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLV 610

Query: 421 EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
           EKR LAE GQA EFS+SSDGGLLFER LCVPSDSA KTELLSEAHSSPFSMHPGSTKMYQ
Sbjct: 611 EKRSLAEAGQAVEFSLSSDGGLLFERCLCVPSDSAAKTELLSEAHSSPFSMHPGSTKMYQ 670

Query: 481 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
           DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPL+IPEWKWENVSMDFITGL
Sbjct: 671 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPVGLLQPLSIPEWKWENVSMDFITGL 730

Query: 541 PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
           PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYTASKWAQLY+SEIVRLH VPVSIVSD+DA 
Sbjct: 731 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHEVPVSIVSDKDAR 790

Query: 601 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
           FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP
Sbjct: 791 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 840

[Close]

BLAST of Cmc08g0232371 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 1213.0 bits (3137), Expect = 0.0e+00
Identity = 605/650 (93.08%), Postives = 614/650 (94.46%), Query Frame = 0


Query: 1   MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTT 60
           MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSG HQLRIKD DVPKT 
Sbjct: 140 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTA 199

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 200 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 259

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 260 LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 319

Query: 181 VRSFLGLA------------------------APFVWSKACEDSFQNLKQKLVTAPVLTV 240
           VRSFLGLA                        APFVWSKACEDSFQNLKQKLVTAPVLTV
Sbjct: 320 VRSFLGLAGYYRRFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 379

Query: 241 PDGPGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 300
           PDG GSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW
Sbjct: 380 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 439

Query: 301 RHYLYDEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPDKANVVADALS 360
           RHYLY EKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHP KANVVADALS
Sbjct: 440 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 499

Query: 361 RKVSHSAALITRQAPLHRDLERDEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 420
           RKVSHSAALITRQAPLHRDLER EIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV
Sbjct: 500 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 559

Query: 421 EKRGLAEVGQAAEFSISSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 480
           EKRGLAE GQA EFS+SSDGGLLFERRLCVPSDSAVKTELL+EAHSSPFSMHPGSTKMYQ
Sbjct: 560 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLAEAHSSPFSMHPGSTKMYQ 619

Query: 481 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLNIPEWKWENVSMDFITGL 540
           DLKR+YWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPL+IPEWKWENVSMDFI GL
Sbjct: 620 DLKRIYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFIAGL 679

Query: 541 PRTLRGFTVIWVVVDKLTKSAHFVPGKSTYTASKWAQLYISEIVRLHGVPVSIVSDRDAC 600
           PRTLRGFTVIWVVVD+LTKSAHFVPGKSTYT SKWAQLY+SEIVRLHGVPVSIVSDRDA 
Sbjct: 680 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTTSKWAQLYMSEIVRLHGVPVSIVSDRDAR 739

Query: 601 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNQVLEDMLRACALEFP 627
           FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLN+VLEDMLRACALEFP
Sbjct: 740 FTSKFWKGLQTAMGTRLDFSTAFHPQTDGQTERLNKVLEDMLRACALEFP 789

[Close]

BLAST of Cmc08g0232371 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 79.3 bits (194), Expect = 1.2e-14
Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 120 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 179
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 180 VSEVRSFLGLAAPF-----------------------VWSKACEDSFQNLKQKLVTAPVL 219
            +E+R FLGL   +                        W++    +F+ LK  + T PVL
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

The following BLAST results are available for this feature:

BLAST of Cmc08g0232371 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK01613.1	0.0e+00	93.85	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062112.1	0.0e+00	93.38	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	0.0e+00	93.38	pol protein [Cucumis melo var. makuwa]	[more]
KAA0026271.1	0.0e+00	93.23	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	0.0e+00	93.08	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0232371 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	3.0e-103	32.98	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.0e-103	32.98	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.0e-103	32.98	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	3.0e-103	32.98	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	3.0e-103	32.98	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0232371 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BPI1	0.0e+00	93.85	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7V1N3	0.0e+00	93.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]
A0A5A7U330	0.0e+00	93.38	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7SPZ2	0.0e+00	93.23	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE...	[more]
A0A5A7UP94	0.0e+00	93.08	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]

BLAST of Cmc08g0232371 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	1.2e-14	34.68	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.20.370		coord: 225..288 e-value: 1.5E-7 score: 33.3
None	No IPR available	GENE3D	1.10.340.70		coord: 395..485 e-value: 2.4E-18 score: 68.1
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..79 e-value: 8.6E-68 score: 229.8
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 2..621
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..154 e-value: 2.99726E-81 score: 252.131
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 224..339 e-value: 3.11458E-56 score: 184.233
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 494..627 e-value: 2.1E-31 score: 110.8
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 430..486 e-value: 2.8E-17 score: 62.5
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 188..224 e-value: 1.9E-5 score: 26.6
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..154 e-value: 8.6E-68 score: 229.8
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 222..317 e-value: 1.6E-33 score: 115.2
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 3..153 e-value: 1.3E-25 score: 90.2
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..154 score: 10.86402
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 497..633 score: 15.404733
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 498..626
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0232371.1	Cmc08g0232371.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding