Cmc08g0231961 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0231961
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	CMiso1.1chr08: 28260583 .. 28261938 (-)
RNA-Seq Expression	Cmc08g0231961
Synteny	Cmc08g0231961

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGTTGTTGGGTGTGTAGTGTACTTGTCAAATTGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTATACGCTTTATAATCCTGTTACAAAGAAGACAATCGTAAGTAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAAATTTTTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCTCTCCACAACAAAGCACATCTTCATCATTTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAATCTTACGAGACATATATAATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGATAGTGAACCTTTGAATTTTGAAGAAGCTTTGAAAAATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAATCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACTATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGGATAAAGTTCTAAAATTGAAGAAGACATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAACGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAATTCTAG

mRNA sequence

ATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGTTGTTGGGTGTGTAGTGTACTTGTCAAATTGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTATACGCTTTATAATCCTGTTACAAAGAAGACAATCGTAAGTAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAAATTTTTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCTCTCCACAACAAAGCACATCTTCATCATTTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAATCTTACGAGACATATATAATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGATAGTGAACCTTTGAATTTTGAAGAAGCTTTGAAAAATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAATCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACTATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGGATAAAGTTCTAAAATTGAAGAAGACATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAACGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAATTCTAG

Coding sequence (CDS)

ATGGCTCGAAGCATGTTGAAGTGCAAGAAGATGCCAAAAGAATTTTGGGCACAAGTTGTTGGGTGTGTAGTGTACTTGTCAAATTGTTCCCCTACTAGAAGCTTATGGAACAAAACTCCTCAACAAGCATGGACAGGAAGAAAACCATCCATTGGTCATTTGAGAGTATTCGGATGCATGGCTTATGCGCATATACCTGATCAAAAGCGTAGTAAGCTTGATAAAAGTGAGAAATATGTGTTTGTTGGCTATGATGCAAGCTCAAAAGGCTATACGCTTTATAATCCTGTTACAAAGAAGACAATCGTAAGTAGAGATGTTGTGTTTGATGAAGAAGCATCATGGAATTGGAATGACGAACCAGAAGATTACAAATTTTTGTTTTTTCCCGACGAACGTGATGAGCCTAGTGACATTGCTTCTCCACCAACATCGCCAATCTCTCCACAACAAAGCACATCTTCATCATTTGCAAGTTCAAGTGAAGGGCCTCGTGGCATGAGAATCTTACGAGACATATATAATGAAACTGAAGAGTTAAGTCAAAGTTTTAATAACCTTACTCTTTTTTGTCTATTTGGTGATAGTGAACCTTTGAATTTTGAAGAAGCTTTGAAAAATGACAAATGGAAGATTGCTATGGATGAAGAGATAAAATCCATAAAAAAGAATGATACGTGGGAACTTTCTACTCTTCCAAATGGAAAGAAAGCAGTAGGTGTCAAATGGGTGTTCAAGATAAAAAGAAATGAAAAGGGAGAAGTGGAGAGATACAAAGCAAGATTAGTTGCAAAAGGATATTCTCAAAGAAAAGGCATTGATTATGATGAAGTATTTGCTCCCGTTGCTCGTTTGGAAACTATAAGGTTGTTAATTGCTCTTGCTGCACAAAATAATTGGAAGATCTTTCAGATGGATGTCAAATCGGCATTTTTGAATGGATATCTAGAAGAAGAAGTCTACTTGGAACAACCTCCTGGTTATTCTGTGAAAGGCCAAGAGGATAAAGTTCTAAAATTGAAGAAGACATTATACGGATTGAAACAAGCACCAAGAATGTGGAATAGCAGAATCAACAAATATTTCCTTGATAATGGGTATTTGAGGTGTCCTTATGAACATTCTCTTTATATTAAGGTTAATGGTCATGGAGATATTTTGGTAGTTTGTTTGTACGTGGATGACTTAATTTTTACAGGAAATTGTGCAAGTATGTTTGAAGATCTCAAGAACGCGATGACCCAAGAATTTGAAATGACAGATATAGGGCTAATGTCATATTATCTTGGCATTGAAGTGAAGCAGTCAGAGGAAGGAATTTTCATCTCTCAAGAACGATATACTAGAGAATTCTAG

Protein sequence

MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAYAHIPDQKRSKLDKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWNDEPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEELSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERYTREF

Homology

[Close]

BLAST of Cmc08g0231961 vs. NCBI nr
Match: TYJ96309.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 882.5 bits (2279), Expect = 1.6e-252
Identity = 435/451 (96.45%), Postives = 440/451 (97.56%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 628  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 687

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 688  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 747

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 748  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 807

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLF DSEPLNFEEAL+NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 808  LSQSFNNLTLFCLFADSEPLNFEEALQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 867

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 868  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 927

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 928  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 987

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 988  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1047

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1048 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1078

[Close]

BLAST of Cmc08g0231961 vs. NCBI nr
Match: TYK06895.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 882.5 bits (2279), Expect = 1.6e-252
Identity = 435/451 (96.45%), Postives = 440/451 (97.56%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 628  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 687

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 688  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 747

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 748  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 807

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLFGDSEPLNFEEA +NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 808  LSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 867

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 868  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 927

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 928  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 987

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 988  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1047

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1048 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1078

[Close]

BLAST of Cmc08g0231961 vs. NCBI nr
Match: TYK13816.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 882.5 bits (2279), Expect = 1.6e-252
Identity = 435/451 (96.45%), Postives = 440/451 (97.56%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 653  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 712

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 713  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 772

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 773  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 832

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLFGDSEPLNFEEA +NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 833  LSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 892

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 893  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 952

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 953  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 1012

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 1013 KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1072

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1073 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1103

[Close]

BLAST of Cmc08g0231961 vs. NCBI nr
Match: TYK18362.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 880.2 bits (2273), Expect = 7.7e-252
Identity = 434/451 (96.23%), Postives = 439/451 (97.34%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 628  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 687

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 688  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 747

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 748  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 807

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLF DSEPLNFEEA +NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 808  LSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 867

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 868  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 927

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 928  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 987

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 988  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1047

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1048 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1078

[Close]

BLAST of Cmc08g0231961 vs. NCBI nr
Match: TYK08113.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 880.2 bits (2273), Expect = 7.7e-252
Identity = 434/451 (96.23%), Postives = 439/451 (97.34%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 628  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 687

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 688  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 747

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 748  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 807

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLF DSEPLNFEEA +NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 808  LSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 867

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 868  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 927

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 928  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 987

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 988  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1047

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1048 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1078

[Close]

BLAST of Cmc08g0231961 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 304.7 bits (779), Expect = 1.8e-81
Identity = 176/472 (37.29%), Postives = 270/472 (57.20%), Query Frame = 0


Query: 3    RSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAY 62
            RSML+  K+PK FW + V    YL N SP+  L  + P++ WT ++ S  HL+VFGC A+
Sbjct: 597  RSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAF 656

Query: 63   AHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWNDEP 122
            AH+P ++R+KL DKS   +F+GY     GY L++PV KK I SRDVVF E       D  
Sbjct: 657  AHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADMS 716

Query: 123  EDYK------FLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSE------------- 182
            E  K      F+  P   + P+  A   T  +S Q           E             
Sbjct: 717  EKVKNGIIPNFVTIPSTSNNPTS-AESTTDEVSEQGEQPGEVIEQGEQLDEGVEEVEHPT 776

Query: 183  -GPRGMRILRDIYNETEELSQSFNNLTLFCLFGDSEPLNFEEAL----KNDKWKIAMDEE 242
             G    + LR       E S+ + +     +  D EP + +E L    KN   K AM EE
Sbjct: 777  QGEEQHQPLRRSERPRVE-SRRYPSTEYVLISDDREPESLKEVLSHPEKNQLMK-AMQEE 836

Query: 243  IKSIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDE 302
            ++S++KN T++L  LP GK+ +  KWVFK+K++   ++ RYKARLV KG+ Q+KGID+DE
Sbjct: 837  MESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYKARLVVKGFEQKKGIDFDE 896

Query: 303  VFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKV 362
            +F+PV ++ +IR +++LAA  + ++ Q+DVK+AFL+G LEEE+Y+EQP G+ V G++  V
Sbjct: 897  IFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMV 956

Query: 363  LKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLI 422
             KL K+LYGLKQAPR W  + + +     YL+   +  +Y K     + +++ LYVDD++
Sbjct: 957  CKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDML 1016

Query: 423  FTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEV--KQSEEGIFISQERY 448
              G    +   LK  +++ F+M D+G     LG+++  +++   +++SQE+Y
Sbjct: 1017 IVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKY 1065

[Close]

BLAST of Cmc08g0231961 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 239.2 bits (609), Expect = 9.1e-62
Identity = 169/555 (30.45%), Postives = 263/555 (47.39%), Query Frame = 0


Query: 2    ARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSL--WNKTPQQAWTGRKPSIGHLRVFGC 61
            AR+M+   K+ K FW + V    YL N  P+R+L   +KTP + W  +KP + HLRVFG 
Sbjct: 596  ARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKKPYLKHLRVFGA 655

Query: 62   MAYAHIPDQKRSKLDKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDE-------- 121
              Y HI +++    DKS K +FVGY+ +  G+ L++ V +K IV+RDVV DE        
Sbjct: 656  TVYVHIKNKQGKFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDVVVDETNMVNSRA 715

Query: 122  -----------EASWNWNDEPEDYKFL--FFPDERDEPSDI--------ASPPTSPISPQ 181
                       + S N N   +  K +   FP+E  E  +I        +     P   +
Sbjct: 716  VKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESENKNFPNDSR 775

Query: 182  QSTSSSFASSSEGPRGMRILRD-------------------------------------- 241
            +   + F + S+    ++ L+D                                      
Sbjct: 776  KIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESKGSGNPNESRESET 835

Query: 242  --------IYNETE-----------------------ELSQSFNNLTL--FCLFGDSEPL 301
                    I N T+                       E   S N + L    +F D  P 
Sbjct: 836  AEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVVLNAHTIFND-VPN 895

Query: 302  NFEEALKND---KWKIAMDEEIKSIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE 361
            +F+E    D    W+ A++ E+ + K N+TW ++  P  K  V  +WVF +K NE G   
Sbjct: 896  SFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWVFSVKYNELGNPI 955

Query: 362  RYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDVKSAFLNGYL 421
            RYKARLVA+G++Q+  IDY+E FAPVAR+ + R +++L  Q N K+ QMDVK+AFLNG L
Sbjct: 956  RYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQMDVKTAFLNGTL 1015

Query: 422  EEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGYLRCPYEHSL 451
            +EE+Y+  P G S     D V KL K +YGLKQA R W     +   +  ++    +  +
Sbjct: 1016 KEEIYMRLPQGISC--NSDNVCKLNKAIYGLKQAARCWFEVFEQALKECEFVNSSVDRCI 1075

[Close]

BLAST of Cmc08g0231961 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.7e-52
Identity = 116/321 (36.14%), Postives = 182/321 (56.70%), Query Frame = 0


Query: 137  SDIASPPTSPISP--------QQSTSSSFASSSEGPRGMRILRDIYNETEELSQSFNNLT 196
            S  ++PP  P+ P         Q+  ++ + ++    G+R     Y+    L+       
Sbjct: 882  SSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQKYSYATSLA------- 941

Query: 197  LFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWEL-STLPNGKKAVGVKWVFKI 256
                  +SEP    +A+K+D+W+ AM  EI +   N TW+L    P     VG +W+F  
Sbjct: 942  -----ANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGCRWIFTK 1001

Query: 257  KRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNNWKIFQMDV 316
            K N  G + RYKARLVAKGY+QR G+DY E F+PV +  +IR+++ +A   +W I Q+DV
Sbjct: 1002 KFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDV 1061

Query: 317  KSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRINKYFLDNGY 376
             +AFL G L +EVY+ QPPG+  K + D V +L+K +YGLKQAPR W   +  Y L  G+
Sbjct: 1062 NNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLTVGF 1121

Query: 377  LRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSY 436
            +    + SL++   G   I+ + +YVDD++ TGN   + +   +A++Q F + +   + Y
Sbjct: 1122 VNSISDTSLFVLQRGR-SIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHY 1181

Query: 437  YLGIEVKQSEEGIFISQERYT 449
            +LGIE K+  +G+ +SQ RYT
Sbjct: 1182 FLGIEAKRVPQGLHLSQRRYT 1189

[Close]

BLAST of Cmc08g0231961 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 3.8e-52
Identity = 122/341 (35.78%), Postives = 190/341 (55.72%), Query Frame = 0


Query: 134  DEPSDIASPPTSPI-----SPQQSTSSSFASSSEGPRGMRI-----LRDIYNETEELSQS 193
            + PS +A   ++P      SP  +TS+S +S+S  P  + I     L  I N   +   +
Sbjct: 866  ESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLN 925

Query: 194  FNNL----------------TLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTW 253
             +++                    L  +SEP    +ALK+++W+ AM  EI +   N TW
Sbjct: 926  THSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTW 985

Query: 254  EL-STLPNGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLE 313
            +L    P+    VG +W+F  K N  G + RYKARLVAKGY+QR G+DY E F+PV +  
Sbjct: 986  DLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKST 1045

Query: 314  TIRLLIALAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYG 373
            +IR+++ +A   +W I Q+DV +AFL G L ++VY+ QPPG+  K + + V KL+K LYG
Sbjct: 1046 SIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYG 1105

Query: 374  LKQAPRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMF 433
            LKQAPR W   +  Y L  G++    + SL++   G   I+ + +YVDD++ TGN  ++ 
Sbjct: 1106 LKQAPRAWYVELRNYLLTIGFVNSVSDTSLFVLQRGK-SIVYMLVYVDDILITGNDPTLL 1165

Query: 434  EDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERY 448
             +  + ++Q F + D   + Y+LGIE K+   G+ +SQ RY
Sbjct: 1166 HNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRY 1205

[Close]

BLAST of Cmc08g0231961 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 7.8e-21
Identity = 53/144 (36.81%), Postives = 83/144 (57.64%), Query Frame = 0


Query: 305 MDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRINKYFLD 364
           MDV +AFLN  ++E +Y++QPPG+  +   D V +L   +YGLKQAP +WN  IN     
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 365 NGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGL 424
            G+ R   EH LY +    G I  + +YVDDL+       +++ +K  +T+ + M D+G 
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPI-YIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGK 120

Query: 425 MSYYLGIEVKQSEEG-IFISQERY 448
           +  +LG+ + QS  G I +S + Y
Sbjct: 121 VDKFLGLNIHQSSNGDITLSLQDY 143

[Close]

BLAST of Cmc08g0231961 vs. ExPASy TrEMBL
Match: A0A5D3CTU3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00790 PE=4 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 7.6e-253
Identity = 435/451 (96.45%), Postives = 440/451 (97.56%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 653  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 712

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 713  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 772

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 773  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 832

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLFGDSEPLNFEEA +NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 833  LSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 892

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 893  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 952

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 953  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 1012

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 1013 KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1072

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1073 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1103

[Close]

BLAST of Cmc08g0231961 vs. ExPASy TrEMBL
Match: A0A5D3C639 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G002010 PE=4 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 7.6e-253
Identity = 435/451 (96.45%), Postives = 440/451 (97.56%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 628  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 687

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 688  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 747

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 748  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 807

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLFGDSEPLNFEEA +NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 808  LSQSFNNLTLFCLFGDSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 867

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 868  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 927

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 928  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 987

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 988  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1047

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1048 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1078

[Close]

BLAST of Cmc08g0231961 vs. ExPASy TrEMBL
Match: A0A5D3BBC7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00120 PE=4 SV=1)

HSP 1 Score: 882.5 bits (2279), Expect = 7.6e-253
Identity = 435/451 (96.45%), Postives = 440/451 (97.56%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 628  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 687

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 688  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 747

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 748  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 807

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLF DSEPLNFEEAL+NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 808  LSQSFNNLTLFCLFADSEPLNFEEALQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 867

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 868  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 927

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 928  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 987

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 988  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1047

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1048 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1078

[Close]

BLAST of Cmc08g0231961 vs. ExPASy TrEMBL
Match: A0A5D3D497 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00810 PE=4 SV=1)

HSP 1 Score: 880.2 bits (2273), Expect = 3.8e-252
Identity = 434/451 (96.23%), Postives = 439/451 (97.34%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 628  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 687

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 688  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 747

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 748  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 807

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLF DSEPLNFEEA +NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 808  LSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 867

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 868  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 927

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 928  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 987

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 988  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1047

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1048 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1078

[Close]

BLAST of Cmc08g0231961 vs. ExPASy TrEMBL
Match: A0A5D3C896 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002790 PE=4 SV=1)

HSP 1 Score: 880.2 bits (2273), Expect = 3.8e-252
Identity = 434/451 (96.23%), Postives = 439/451 (97.34%), Query Frame = 0


Query: 1    MARSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 60
            MARSMLKCKKMPKEFWAQ V C VYLSN SPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM
Sbjct: 628  MARSMLKCKKMPKEFWAQAVECAVYLSNRSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCM 687

Query: 61   AYAHIPDQKRSKL-DKSEKYVFVGYDASSKGYTLYNPVTKKTIVSRDVVFDEEASWNWND 120
            AYAHIPDQKRSKL DKSEKYVFVGYDASSKGY LYNPVTKKTIVSRDVVFDEEASWNWND
Sbjct: 688  AYAHIPDQKRSKLDDKSEKYVFVGYDASSKGYKLYNPVTKKTIVSRDVVFDEEASWNWND 747

Query: 121  EPEDYKFLFFPDERDEPSDIASPPTSPISPQQSTSSSFASSSEGPRGMRILRDIYNETEE 180
            EPEDYKFLFFPDERDEPSDIASPPTSPI+PQQSTSSS ASSSEGPRGMR L+DIY+ETEE
Sbjct: 748  EPEDYKFLFFPDERDEPSDIASPPTSPITPQQSTSSSSASSSEGPRGMRSLQDIYDETEE 807

Query: 181  LSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAV 240
            LSQSFNNLTLFCLF DSEPLNFEEA +NDKWKIAMDEEIK+IKKNDTWELSTLPNGKKAV
Sbjct: 808  LSQSFNNLTLFCLFADSEPLNFEEASQNDKWKIAMDEEIKAIKKNDTWELSTLPNGKKAV 867

Query: 241  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 300
            GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN
Sbjct: 868  GVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQNN 927

Query: 301  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKTLYGLKQAPRMWNSRIN 360
            WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKK LYGLKQAPRMWNSRIN
Sbjct: 928  WKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQEDKVLKLKKALYGLKQAPRMWNSRIN 987

Query: 361  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEM 420
            KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLK AMTQEFEM
Sbjct: 988  KYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDLKKAMTQEFEM 1047

Query: 421  TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 451
            TDIGLMSYYLGIEVKQSEEGIFISQERYTRE
Sbjct: 1048 TDIGLMSYYLGIEVKQSEEGIFISQERYTRE 1078

[Close]

BLAST of Cmc08g0231961 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 219.2 bits (557), Expect = 6.9e-57
Identity = 111/278 (39.93%), Postives = 178/278 (64.03%), Query Frame = 0


Query: 174 YNETEELSQSFNNLTLFCLFGDSEPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLP 233
           Y +   L  SF    L C+    EP  + EA +   W  AMD+EI +++   TWE+ TLP
Sbjct: 66  YEKVSPLYHSF----LVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLP 125

Query: 234 NGKKAVGVKWVFKIKRNEKGEVERYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIA 293
             KK +G KWV+KIK N  G +ERYKARLVAKGY+Q++GID+ E F+PV +L +++L++A
Sbjct: 126 PNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILA 185

Query: 294 LAAQNNWKIFQMDVKSAFLNGYLEEEVYLEQPPGYSVKGQE----DKVLKLKKTLYGLKQ 353
           ++A  N+ + Q+D+ +AFLNG L+EE+Y++ PPGY+ +  +    + V  LKK++YGLKQ
Sbjct: 186 ISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQ 245

Query: 354 APRMWNSRINKYFLDNGYLRCPYEHSLYIKVNGHGDILVVCLYVDDLIFTGNCASMFEDL 413
           A R W  + +   +  G+++   +H+ ++K+      L V +YVDD+I   N  +  ++L
Sbjct: 246 ASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITA-TLFLCVLVYVDDIIICSNNDAAVDEL 305

Query: 414 KNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQERY 448
           K+ +   F++ D+G + Y+LG+E+ +S  GI I Q +Y
Sbjct: 306 KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKY 338

[Close]

BLAST of Cmc08g0231961 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 85.1 bits (209), Expect = 1.6e-16
Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 0


Query: 197 EPLNFEEALKNDKWKIAMDEEIKSIKKNDTWELSTLPNGKKAVGVKWVFKIKRNEKGEVE 256
           EP +   ALK+  W  AM EE+ ++ +N TW L   P  +  +G KWVFK K +  G ++
Sbjct: 27  EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86

Query: 257 RYKARLVAKGYSQRKGIDYDEVFAPVARLETIRLLIALAAQ 298
           R KARLVAKG+ Q +GI + E ++PV R  TIR ++ +A Q
Sbjct: 87  RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQQ 127

[Close]

BLAST of Cmc08g0231961 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07
Identity = 22/64 (34.38%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 387 LVVCLYVDDLIFTGNCASMFEDLKNAMTQEFEMTDIGLMSYYLGIEVKQSEEGIFISQER 446
           + + LYVDD++ TG+  ++   L   ++  F M D+G + Y+LGI++K    G+F+SQ +
Sbjct: 1   MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60

Query: 447 YTRE 451
           Y  +
Sbjct: 61  YAEQ 64

[Close]

BLAST of Cmc08g0231961 vs. TAIR 10
Match: ATMG00710.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 47.4 bits (111), Expect = 3.6e-05
Identity = 23/67 (34.33%), Postives = 34/67 (50.75%), Query Frame = 0


Query: 3  RSMLKCKKMPKEFWAQVVGCVVYLSNCSPTRSLWNKTPQQAWTGRKPSIGHLRVFGCMAY 62
          RSML    +PK F A      V++ N  P+ ++    P + W    P+  +LR FGC+AY
Sbjct: 10 RSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLRRFGCVAY 69

Query: 63 AHIPDQK 70
           H  + K
Sbjct: 70 IHCDEGK 76

The following BLAST results are available for this feature:

BLAST of Cmc08g0231961 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ96309.1	1.6e-252	96.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK06895.1	1.6e-252	96.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK13816.1	1.6e-252	96.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK18362.1	7.7e-252	96.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]
TYK08113.1	7.7e-252	96.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Cmc08g0231961 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	1.8e-81	37.29	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	9.1e-62	30.45	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q9ZT94	1.7e-52	36.14	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q94HW2	3.8e-52	35.78	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
P25600	7.8e-21	36.81	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc08g0231961 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CTU3	7.6e-253	96.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C639	7.6e-253	96.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3BBC7	7.6e-253	96.45	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D497	3.8e-252	96.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3C896	3.8e-252	96.23	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Cmc08g0231961 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	6.9e-57	39.93	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	1.6e-16	43.56	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
ATMG00810.1	8.6e-07	34.38	DNA/RNA polymerases superfamily protein	[more]
ATMG00710.1	3.6e-05	34.33	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 224..448 e-value: 3.1E-83 score: 279.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..164
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 144..162
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 196..448 coord: 2..118
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 223..447
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 4..57

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0231961.1	Cmc08g0231961.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding