Cmc08g0230111 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0230111
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr08: 25529689 .. 25530087 (-)
RNA-Seq Expression	Cmc08g0230111
Synteny	Cmc08g0230111

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCTTTCTGGAGAATAATCTTGTCTCATGGTTCAGTAAGAAGCAAAATTGTGTTTCTCTATCAACAGCTGAAGCGGAATATATAGCAGCAGGGAGTGGGTGTACTCAAATGATATGGATGAAAAATATGTTAAATGAATATGGGATTATGGAAGGAGTTATTACCTTATATTGTGATAATATGAGTGCCATAGATATTTCAAAAAATCCAGTCCAGCATAGTCGCACCAAACATATTGATATAAGGCATCATTTTATTAGGGATCTCATTGAAAATAAAGTCATCACATTACAACACATTCGCTCGAACTCACAATTGGCTGACATTTTCACTAAGCCTCTTGATGCAACCACGTTTGAGCATTTACGAATGTGTTTAGGAGTGTGTAAAATATAG

mRNA sequence

ATGTTCTTTCTGGAGAATAATCTTGTCTCATGGTTCAGTAAGAAGCAAAATTGTGTTTCTCTATCAACAGCTGAAGCGGAATATATAGCAGCAGGGAGTGGGTGTACTCAAATGATATGGATGAAAAATATGTTAAATGAATATGGGATTATGGAAGGAGTTATTACCTTATATTGTGATAATATGAGTGCCATAGATATTTCAAAAAATCCAGTCCAGCATAGTCGCACCAAACATATTGATATAAGGCATCATTTTATTAGGGATCTCATTGAAAATAAAGTCATCACATTACAACACATTCGCTCGAACTCACAATTGGCTGACATTTTCACTAAGCCTCTTGATGCAACCACGTTTGAGCATTTACGAATGTGTTTAGGAGTGTGTAAAATATAG

Coding sequence (CDS)

ATGTTCTTTCTGGAGAATAATCTTGTCTCATGGTTCAGTAAGAAGCAAAATTGTGTTTCTCTATCAACAGCTGAAGCGGAATATATAGCAGCAGGGAGTGGGTGTACTCAAATGATATGGATGAAAAATATGTTAAATGAATATGGGATTATGGAAGGAGTTATTACCTTATATTGTGATAATATGAGTGCCATAGATATTTCAAAAAATCCAGTCCAGCATAGTCGCACCAAACATATTGATATAAGGCATCATTTTATTAGGGATCTCATTGAAAATAAAGTCATCACATTACAACACATTCGCTCGAACTCACAATTGGCTGACATTTTCACTAAGCCTCTTGATGCAACCACGTTTGAGCATTTACGAATGTGTTTAGGAGTGTGTAAAATATAG

Protein sequence

MFFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDNMSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFEHLRMCLGVCKI

Homology

[Close]

BLAST of Cmc08g0230111 vs. NCBI nr
Match: KAA0055610.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 221.1 bits (562), Expect = 5.7e-54
Identity = 104/130 (80.00%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 2   FFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDN 61
           FFL NNL+SW SKKQNCVSLST EAEYIAAGSGCTQ+IWMKNML+EYG  +  +TLYCDN
Sbjct: 153 FFLGNNLISWLSKKQNCVSLSTTEAEYIAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDN 212

Query: 62  MSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFE 121
            SAIDISKNPVQHSRTKHIDIRHHFIR+L+E+KVI L HIRSN QL DIFTKPLDA++FE
Sbjct: 213 TSAIDISKNPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLVDIFTKPLDASSFE 272

Query: 122 HLRMCLGVCK 132
           +LR  LGVC+
Sbjct: 273 YLRAGLGVCR 282

[Close]

BLAST of Cmc08g0230111 vs. NCBI nr
Match: KAA0048308.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK10653.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53
Identity = 103/123 (83.74%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 2   FFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDN 61
           FFL NNL+SWFSKKQN VSLSTAEAEYIA GSGCTQ+IWMKNML+EY I + V+T+YCDN
Sbjct: 109 FFLGNNLISWFSKKQNSVSLSTAEAEYIAVGSGCTQLIWMKNMLHEYEITQDVMTMYCDN 168

Query: 62  MSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFE 121
           M+AIDISKNP+Q SRTK+IDIRHHFIR+LIENK+ITL+HIRSNSQLADIFTKPLDATTF+
Sbjct: 169 MNAIDISKNPIQRSRTKYIDIRHHFIRELIENKIITLEHIRSNSQLADIFTKPLDATTFD 228

Query: 122 HLR 125
           HLR
Sbjct: 229 HLR 231

[Close]

BLAST of Cmc08g0230111 vs. NCBI nr
Match: TYK21311.1 (F5J5.1 [Cucumis melo var. makuwa])

HSP 1 Score: 209.9 bits (533), Expect = 1.3e-50
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 11  WFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDNMSAIDISKN 70
           WFSKKQ CVSLST E EYIA GSGCTQ+IWMKNML+EYGI + V+TLYCDNMSAIDISK 
Sbjct: 431 WFSKKQICVSLSTVEVEYIATGSGCTQLIWMKNMLHEYGITQDVMTLYCDNMSAIDISKY 490

Query: 71  PVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFEHLRMCLGV 130
           PVQHS+TKHIDIRHHFIR+LIENK+ITLQH+RS SQLADIFTKPLD TTFEHLR  LGV
Sbjct: 491 PVQHSQTKHIDIRHHFIRELIENKIITLQHVRSYSQLADIFTKPLDETTFEHLRAGLGV 549

[Close]

BLAST of Cmc08g0230111 vs. NCBI nr
Match: TXG60530.1 (hypothetical protein EZV62_015103 [Acer yangbiense])

HSP 1 Score: 209.1 bits (531), Expect = 2.2e-50
Identity = 96/131 (73.28%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 2   FFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDN 61
           FFL NNLVSWF KKQN +SLSTAEAEYIAAGSGCTQ++WMK ML +YG  +G +TL+CDN
Sbjct: 709 FFLGNNLVSWFCKKQNSISLSTAEAEYIAAGSGCTQLLWMKQMLVDYGFNQGTLTLFCDN 768

Query: 62  MSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFE 121
           MSAI+ISKNPVQHSRTKHIDIRHHFIR+L+ENK I L+H+ +N QLAD+FTKPLDAT F+
Sbjct: 769 MSAINISKNPVQHSRTKHIDIRHHFIRELVENKCIVLEHVGTNDQLADLFTKPLDATRFK 828

Query: 122 HLRMCLGVCKI 133
            L   +GVC +
Sbjct: 829 TLSRSIGVCLV 839

[Close]

BLAST of Cmc08g0230111 vs. NCBI nr
Match: KAA0034956.1 (F5J5.1 [Cucumis melo var. makuwa])

HSP 1 Score: 208.8 bits (530), Expect = 2.9e-50
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 11  WFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDNMSAIDISKN 70
           WFSKKQ CVSLST E EYIA GSGCTQ+IWMKNML+EYGI + V+TLYCDNMSAIDISK 
Sbjct: 431 WFSKKQICVSLSTVEVEYIATGSGCTQLIWMKNMLHEYGITQDVMTLYCDNMSAIDISKY 490

Query: 71  PVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFEHLRMCLG 129
           PVQHS+TKHIDIRHHFIR+LIENK+ITLQH+RS SQLADIFTKPLD TTFEHLR  LG
Sbjct: 491 PVQHSQTKHIDIRHHFIRELIENKIITLQHVRSYSQLADIFTKPLDETTFEHLRAGLG 548

[Close]

BLAST of Cmc08g0230111 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 3.1e-26
Identity = 55/129 (42.64%), Postives = 84/129 (65.12%), Query Frame = 0


Query: 1    MFFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCD 60
            +F      +SW SK Q CV+LST EAEYIAA     +MIW+K  L E G+ +    +YCD
Sbjct: 1197 LFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLHQKEYVVYCD 1256

Query: 61   NMSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTF 120
            + SAID+SKN + H+RTKHID+R+H+IR++++++ + +  I +N   AD+ TK +    F
Sbjct: 1257 SQSAIDLSKNSMYHARTKHIDVRYHWIREMVDDESLKVLKISTNENPADMLTKVVPRNKF 1316

Query: 121  EHLRMCLGV 130
            E  +  +G+
Sbjct: 1317 ELCKELVGM 1325

[Close]

BLAST of Cmc08g0230111 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 114.8 bits (286), Expect = 7.6e-25
Identity = 57/124 (45.97%), Postives = 80/124 (64.52%), Query Frame = 0


Query: 7    NLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGI-MEGVITLYCDNMSAI 66
            NL+ W +K+QN V+ S+ EAEY+A      + +W+K +L    I +E  I +Y DN   I
Sbjct: 1277 NLICWNTKRQNSVAASSTEAEYMALFEAVREALWLKFLLTSINIKLENPIKIYEDNQGCI 1336

Query: 67   DISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFEHLRM 126
             I+ NP  H R KHIDI++HF R+ ++N VI L++I + +QLADIFTKPL A  F  LR 
Sbjct: 1337 SIANNPSCHKRAKHIDIKYHFAREQVQNNVICLEYIPTENQLADIFTKPLPAARFVELRD 1396

Query: 127  CLGV 130
             LG+
Sbjct: 1397 KLGL 1400

[Close]

BLAST of Cmc08g0230111 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-21
Identity = 51/131 (38.93%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 3    FLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGI-MEGVITLYCDN 62
            +L ++ +SW SKKQ  V  S+ EAEY +  +  ++M W+ ++L E GI +     +YCDN
Sbjct: 1333 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRPPVIYCDN 1392

Query: 63   MSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFE 122
            + A  +  NPV HSR KHI I +HFIR+ +++  + + H+ ++ QLAD  TKPL  T F+
Sbjct: 1393 VGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRTAFQ 1452

Query: 123  HLRMCLGVCKI 133
            +    +GV ++
Sbjct: 1453 NFASKIGVTRV 1463

[Close]

BLAST of Cmc08g0230111 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 49/131 (37.40%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 3    FLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGI-MEGVITLYCDN 62
            +L ++ +SW SKKQ  V  S+ EAEY +  +  +++ W+ ++L E GI +     +YCDN
Sbjct: 1316 YLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDN 1375

Query: 63   MSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFE 122
            + A  +  NPV HSR KHI + +HFIR+ +++  + + H+ ++ QLAD  TKPL    F+
Sbjct: 1376 VGATYLCANPVFHSRMKHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQ 1435

Query: 123  HLRMCLGVCKI 133
            +    +GV K+
Sbjct: 1436 NFSRKIGVIKV 1446

[Close]

BLAST of Cmc08g0230111 vs. ExPASy Swiss-Prot
Match: Q12113 (Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-OR1 PE=3 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 34/127 (26.77%), Postives = 61/127 (48.03%), Query Frame = 0


Query: 1    MFFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNM---LNEYGIMEGVITL 60
            +F L   ++   S K +    ST EAE  A       +  + ++   LN+  I++G++T 
Sbjct: 1641 IFLLNGKVIGGKSTKASLTCTSTTEAEIHAVSEAIPLLNNLSHLVQELNKKPIIKGLLT- 1700

Query: 61   YCDNMSAIDISKNPVQHS-RTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLD 120
              D+ S I I K+  +   R +    +   +RD +    + + +I +N  +AD+ TKPL 
Sbjct: 1701 --DSRSTISIIKSTNEEKFRNRFFGTKAMRLRDEVSGNNLYVYYIETNKNIADVMTKPLP 1760

Query: 121  ATTFEHL 124
              TF+ L
Sbjct: 1761 IKTFKLL 1764

[Close]

BLAST of Cmc08g0230111 vs. ExPASy TrEMBL
Match: A0A5D3DLL1 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G00150 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-54
Identity = 104/130 (80.00%), Postives = 116/130 (89.23%), Query Frame = 0


Query: 2   FFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDN 61
           FFL NNL+SW SKKQNCVSLST EAEYIAAGSGCTQ+IWMKNML+EYG  +  +TLYCDN
Sbjct: 153 FFLGNNLISWLSKKQNCVSLSTTEAEYIAAGSGCTQLIWMKNMLHEYGFDQDTMTLYCDN 212

Query: 62  MSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFE 121
            SAIDISKNPVQHSRTKHIDIRHHFIR+L+E+KVI L HIRSN QL DIFTKPLDA++FE
Sbjct: 213 TSAIDISKNPVQHSRTKHIDIRHHFIRELVEDKVIKLDHIRSNLQLVDIFTKPLDASSFE 272

Query: 122 HLRMCLGVCK 132
           +LR  LGVC+
Sbjct: 273 YLRAGLGVCR 282

[Close]

BLAST of Cmc08g0230111 vs. ExPASy TrEMBL
Match: A0A5A7TZB3 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00150 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.2e-54
Identity = 103/123 (83.74%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 2   FFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDN 61
           FFL NNL+SWFSKKQN VSLSTAEAEYIA GSGCTQ+IWMKNML+EY I + V+T+YCDN
Sbjct: 109 FFLGNNLISWFSKKQNSVSLSTAEAEYIAVGSGCTQLIWMKNMLHEYEITQDVMTMYCDN 168

Query: 62  MSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFE 121
           M+AIDISKNP+Q SRTK+IDIRHHFIR+LIENK+ITL+HIRSNSQLADIFTKPLDATTF+
Sbjct: 169 MNAIDISKNPIQRSRTKYIDIRHHFIRELIENKIITLEHIRSNSQLADIFTKPLDATTFD 228

Query: 122 HLR 125
           HLR
Sbjct: 229 HLR 231

[Close]

BLAST of Cmc08g0230111 vs. ExPASy TrEMBL
Match: A0A5D3DCC3 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00200 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 6.4e-51
Identity = 100/119 (84.03%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 11  WFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDNMSAIDISKN 70
           WFSKKQ CVSLST E EYIA GSGCTQ+IWMKNML+EYGI + V+TLYCDNMSAIDISK 
Sbjct: 431 WFSKKQICVSLSTVEVEYIATGSGCTQLIWMKNMLHEYGITQDVMTLYCDNMSAIDISKY 490

Query: 71  PVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFEHLRMCLGV 130
           PVQHS+TKHIDIRHHFIR+LIENK+ITLQH+RS SQLADIFTKPLD TTFEHLR  LGV
Sbjct: 491 PVQHSQTKHIDIRHHFIRELIENKIITLQHVRSYSQLADIFTKPLDETTFEHLRAGLGV 549

[Close]

BLAST of Cmc08g0230111 vs. ExPASy TrEMBL
Match: A0A5C7HUE9 (Integrase catalytic domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_015103 PE=4 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 1.1e-50
Identity = 96/131 (73.28%), Postives = 113/131 (86.26%), Query Frame = 0


Query: 2   FFLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDN 61
           FFL NNLVSWF KKQN +SLSTAEAEYIAAGSGCTQ++WMK ML +YG  +G +TL+CDN
Sbjct: 709 FFLGNNLVSWFCKKQNSISLSTAEAEYIAAGSGCTQLLWMKQMLVDYGFNQGTLTLFCDN 768

Query: 62  MSAIDISKNPVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFE 121
           MSAI+ISKNPVQHSRTKHIDIRHHFIR+L+ENK I L+H+ +N QLAD+FTKPLDAT F+
Sbjct: 769 MSAINISKNPVQHSRTKHIDIRHHFIRELVENKCIVLEHVGTNDQLADLFTKPLDATRFK 828

Query: 122 HLRMCLGVCKI 133
            L   +GVC +
Sbjct: 829 TLSRSIGVCLV 839

[Close]

BLAST of Cmc08g0230111 vs. ExPASy TrEMBL
Match: A0A5A7SYI8 (F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold434G00200 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.4e-50
Identity = 99/118 (83.90%), Postives = 107/118 (90.68%), Query Frame = 0


Query: 11  WFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGIMEGVITLYCDNMSAIDISKN 70
           WFSKKQ CVSLST E EYIA GSGCTQ+IWMKNML+EYGI + V+TLYCDNMSAIDISK 
Sbjct: 431 WFSKKQICVSLSTVEVEYIATGSGCTQLIWMKNMLHEYGITQDVMTLYCDNMSAIDISKY 490

Query: 71  PVQHSRTKHIDIRHHFIRDLIENKVITLQHIRSNSQLADIFTKPLDATTFEHLRMCLG 129
           PVQHS+TKHIDIRHHFIR+LIENK+ITLQH+RS SQLADIFTKPLD TTFEHLR  LG
Sbjct: 491 PVQHSQTKHIDIRHHFIRELIENKIITLQHVRSYSQLADIFTKPLDETTFEHLRAGLG 548

[Close]

BLAST of Cmc08g0230111 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 72.4 bits (176), Expect = 3.1e-13
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 3   FLENNLVSWFSKKQNCVSLSTAEAEYIAAGSGCTQMIWMKNMLNEYGI-MEGVITLYCDN 62
           FL  +L+SW SKKQ  VS S+AEAEY A      +M+W+     E  + +     L+CDN
Sbjct: 466 FLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDN 525

Query: 63  MSAIDISKNPVQHSRTKHIDIRHHFIRD 90
            +AI I+ N V H RTKHI+   H +R+
Sbjct: 526 TAAIHIATNAVFHERTKHIESDCHSVRE 553

The following BLAST results are available for this feature:

BLAST of Cmc08g0230111 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0055610.1	5.7e-54	80.00	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK24458.1 gag-pol polyprotein [...	[more]
KAA0048308.1	1.3e-53	83.74	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK10653.1 gag-pol polyprotein [...	[more]
TYK21311.1	1.3e-50	84.03	F5J5.1 [Cucumis melo var. makuwa]	[more]
TXG60530.1	2.2e-50	73.28	hypothetical protein EZV62_015103 [Acer yangbiense]	[more]
KAA0034956.1	2.9e-50	83.90	F5J5.1 [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0230111 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	3.1e-26	42.64	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	7.6e-25	45.97	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q94HW2	2.3e-21	38.93	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.1e-20	37.40	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
Q12113	2.5e-04	26.77	Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ...	[more]

BLAST of Cmc08g0230111 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DLL1	2.8e-54	80.00	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold717G...	[more]
A0A5A7TZB3	6.2e-54	83.74	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G0...	[more]
A0A5D3DCC3	6.4e-51	84.03	F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1199G00200 PE=4 S...	[more]
A0A5C7HUE9	1.1e-50	73.28	Integrase catalytic domain-containing protein OS=Acer yangbiense OX=1000413 GN=E...	[more]
A0A5A7SYI8	1.4e-50	83.90	F5J5.1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold434G00200 PE=4 SV...	[more]

BLAST of Cmc08g0230111 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.1e-13	43.18	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11439:SF355	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 5..131
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 5..131
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 1..115 e-value: 3.62047E-66 score: 194.994

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0230111.1	Cmc08g0230111.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0052923	all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding