Cmc08g0228921 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0228921
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	CMiso1.1chr08: 23411617 .. 23412366 (-)
RNA-Seq Expression	Cmc08g0228921
Synteny	Cmc08g0228921

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACGAGTACATATGATCATTCTATTTTTTATCGTCGATCTGATAATGGTATAGTTTTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATCGGGTATTTCATCTCTCAAAACTTTCCTTCAGGGTCATTTTCACACAAAAGATATGGGTCAACTGAAATATTTTTTGGGCATTGAAGTGATGAGAAGTAAGAAATGTATTTATTTGTCTCAACGAAAATATGTACTTGATTTGTTGTCTGAAACAGAAAAATTAGGAGCCAAACCAAGTGGTACTCTGATGATGCCGAATCAGCAACTTGTTAAAGAAGGAAAATTATGTAAAGACCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAATGACTCAACCAGACATTGCTTATTCTGTTAGTGTGGTAAGTCAGTTTATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAACAGATTCTATGTTATTTGAAAGCTGCTCCTGGACGTGGGATCTTATACAAAGATCATGGACATACGAGAGTTGAATGTTTTTCTGATGCTGATTGGGCGGGATCTCGAGAGGATAGCAGATCAAGCTCTGAATATTGTGTCTTTGTAGGCGGAAACTTGGTATCATGGAAGAGTAAGAAACAAAATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGACACAATCTGTGCGAAATAGTATGGATTCACCAACTATTATCTGA

mRNA sequence

ATGCAAACGAGTACATATGATCATTCTATTTTTTATCGTCGATCTGATAATGGTATAGTTTTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATCGGGTATTTCATCTCTCAAAACTTTCCTTCAGGGTCATTTTCACACAAAAGATATGGGTCAACTGAAATATTTTTTGGGCATTGAAGTGATGAGAAGTAAGAAATGTATTTATTTGTCTCAACGAAAATATGTACTTGATTTGTTGTCTGAAACAGAAAAATTAGGAGCCAAACCAAGTGGTACTCTGATGATGCCGAATCAGCAACTTGTTAAAGAAGGAAAATTATGTAAAGACCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAATGACTCAACCAGACATTGCTTATTCTGTTAGTGTGGTAAGTCAGTTTATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAACAGATTCTATGTTATTTGAAAGCTGCTCCTGGACGTGGGATCTTATACAAAGATCATGGACATACGAGAGTTGAATGTTTTTCTGATGCTGATTGGGCGGGATCTCGAGAGGATAGCAGATCAAGCTCTGAATATTGTGTCTTTGTAGGCGGAAACTTGGTATCATGGAAGAGTAAGAAACAAAATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGACACAATCTGTGCGAAATAGTATGGATTCACCAACTATTATCTGA

Coding sequence (CDS)

ATGCAAACGAGTACATATGATCATTCTATTTTTTATCGTCGATCTGATAATGGTATAGTTTTACTAGTTGTATATGTTGATGATATTGTTATTACTGGAAATGATGCATCGGGTATTTCATCTCTCAAAACTTTCCTTCAGGGTCATTTTCACACAAAAGATATGGGTCAACTGAAATATTTTTTGGGCATTGAAGTGATGAGAAGTAAGAAATGTATTTATTTGTCTCAACGAAAATATGTACTTGATTTGTTGTCTGAAACAGAAAAATTAGGAGCCAAACCAAGTGGTACTCTGATGATGCCGAATCAGCAACTTGTTAAAGAAGGAAAATTATGTAAAGACCCTGAGAGATATAGGAGATTAGTTGGGAAGTTGAACTACTTAACAATGACTCAACCAGACATTGCTTATTCTGTTAGTGTGGTAAGTCAGTTTATGTCTTCCCCTACAGTGGATCATTGGGCTGCAGTAGAACAGATTCTATGTTATTTGAAAGCTGCTCCTGGACGTGGGATCTTATACAAAGATCATGGACATACGAGAGTTGAATGTTTTTCTGATGCTGATTGGGCGGGATCTCGAGAGGATAGCAGATCAAGCTCTGAATATTGTGTCTTTGTAGGCGGAAACTTGGTATCATGGAAGAGTAAGAAACAAAATGTTGTTTCTCGTTCGAGTGCTGAGTCAGAATATAGAGCTATGACACAATCTGTGCGAAATAGTATGGATTCACCAACTATTATCTGA

Protein sequence

MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVRNSMDSPTII

Homology

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BLAST of Cmc08g0228921 vs. NCBI nr
Match: TYK05415.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 471.9 bits (1213), Expect = 3.5e-129
Identity = 235/242 (97.11%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
           MQ STYDHS+FYRRSDNGIVLLVVYVDD VITGNDA GISSLKTFLQGHFHTKDMGQLKY
Sbjct: 74  MQNSTYDHSVFYRRSDNGIVLLVVYVDDTVITGNDAWGISSLKTFLQGHFHTKDMGQLKY 133

Query: 61  FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 120
           FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR
Sbjct: 134 FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 193

Query: 121 RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 180
           RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH
Sbjct: 194 RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 253

Query: 181 TRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVR 240
           TRVECFSDADWAGSREDS SSS YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVR
Sbjct: 254 TRVECFSDADWAGSREDSISSSGYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVR 313

Query: 241 NS 243
           N+
Sbjct: 314 NT 315

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BLAST of Cmc08g0228921 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 7.3e-119
Identity = 219/239 (91.63%), Postives = 228/239 (95.40%), Query Frame = 0


Query: 1    MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
            M+ ST DHS+FYRRS+ GIVLLVVYVDDIVITGNDA GISSLKTFLQG F+TKD+GQLKY
Sbjct: 1007 MKKSTSDHSVFYRRSEKGIVLLVVYVDDIVITGNDALGISSLKTFLQGQFYTKDLGQLKY 1066

Query: 61   FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 120
            FLGIEVMRSKK IYLSQRKYVLDLLSET KLGAKPSGT MMPNQQLVKEG+LCKDPERYR
Sbjct: 1067 FLGIEVMRSKKGIYLSQRKYVLDLLSETGKLGAKPSGTPMMPNQQLVKEGELCKDPERYR 1126

Query: 121  RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 180
            RLVGKLNYLT+T+PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH
Sbjct: 1127 RLVGKLNYLTVTRPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 1186

Query: 181  TRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV 240
            TRVECFSDADWAGSRED RS+S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Sbjct: 1187 TRVECFSDADWAGSREDRRSTSGYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSV 1245

[Close]

BLAST of Cmc08g0228921 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 7.3e-119
Identity = 219/239 (91.63%), Postives = 228/239 (95.40%), Query Frame = 0


Query: 1   MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
           M+ ST DHS+FYRRS+ GIVLLVVYVDDIVITGNDA GISSLKTFLQG F+TKD+GQLKY
Sbjct: 630 MKKSTSDHSVFYRRSEKGIVLLVVYVDDIVITGNDALGISSLKTFLQGQFYTKDLGQLKY 689

Query: 61  FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 120
           FLGIEVMRSKK IYLSQRKYVLDLLSET KLGAKPSGT MMPNQQLVKEG+LCKDPERYR
Sbjct: 690 FLGIEVMRSKKGIYLSQRKYVLDLLSETGKLGAKPSGTPMMPNQQLVKEGELCKDPERYR 749

Query: 121 RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 180
           RLVGKLNYLT+T+PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH
Sbjct: 750 RLVGKLNYLTVTRPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 809

Query: 181 TRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV 240
           TRVECFSDADWAGSRED RS+S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Sbjct: 810 TRVECFSDADWAGSREDRRSTSGYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSV 868

[Close]

BLAST of Cmc08g0228921 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 7.3e-119
Identity = 219/239 (91.63%), Postives = 228/239 (95.40%), Query Frame = 0


Query: 1    MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
            M+ ST DHS+FYRRS+ GIVLLVVYVDDIVITGNDA GISSLKTFLQG F+TKD+GQLKY
Sbjct: 1022 MKKSTSDHSVFYRRSEKGIVLLVVYVDDIVITGNDALGISSLKTFLQGQFYTKDLGQLKY 1081

Query: 61   FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 120
            FLGIEVMRSKK IYLSQRKYVLDLLSET KLGAKPSGT MMPNQQLVKEG+LCKDPERYR
Sbjct: 1082 FLGIEVMRSKKGIYLSQRKYVLDLLSETGKLGAKPSGTPMMPNQQLVKEGELCKDPERYR 1141

Query: 121  RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 180
            RLVGKLNYLT+T+PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH
Sbjct: 1142 RLVGKLNYLTVTRPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 1201

Query: 181  TRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV 240
            TRVECFSDADWAGSRED RS+S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Sbjct: 1202 TRVECFSDADWAGSREDRRSTSGYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSV 1260

[Close]

BLAST of Cmc08g0228921 vs. NCBI nr
Match: XP_031744755.1 (uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus])

HSP 1 Score: 437.6 bits (1124), Expect = 7.3e-119
Identity = 219/239 (91.63%), Postives = 228/239 (95.40%), Query Frame = 0


Query: 1    MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
            M+ ST DHS+FYRRS+ GIVLLVVYVDDIVITGNDA GISSLKTFLQG F+TKD+GQLKY
Sbjct: 974  MKKSTSDHSVFYRRSEKGIVLLVVYVDDIVITGNDALGISSLKTFLQGQFYTKDLGQLKY 1033

Query: 61   FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 120
            FLGIEVMRSKK IYLSQRKYVLDLLSET KLGAKPSGT MMPNQQLVKEG+LCKDPERYR
Sbjct: 1034 FLGIEVMRSKKGIYLSQRKYVLDLLSETGKLGAKPSGTPMMPNQQLVKEGELCKDPERYR 1093

Query: 121  RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 180
            RLVGKLNYLT+T+PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH
Sbjct: 1094 RLVGKLNYLTVTRPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 1153

Query: 181  TRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV 240
            TRVECFSDADWAGSRED RS+S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Sbjct: 1154 TRVECFSDADWAGSREDRRSTSGYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSV 1212

[Close]

BLAST of Cmc08g0228921 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 3.2e-48
Identity = 104/236 (44.07%), Postives = 146/236 (61.86%), Query Frame = 0


Query: 4    STYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLG 63
            S  D S+F  +    IV ++VYVDDI+ITGND + + +    L   F  KD  +L YFLG
Sbjct: 1129 SVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLG 1188

Query: 64   IEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQL-VKEGKLCKDPERYRRL 123
            IE  R    ++LSQR+Y+LDLL+ T  + AKP  T M P+ +L +  G    DP  YR +
Sbjct: 1189 IEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGI 1248

Query: 124  VGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTR 183
            VG L YL  T+PDI+Y+V+ +SQFM  PT +H  A+++IL YL   P  GI  K      
Sbjct: 1249 VGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLS 1308

Query: 184  VECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQS 239
            +  +SDADWAG ++D  S++ Y V++G + +SW SKKQ  V RSS E+EYR++  +
Sbjct: 1309 LHAYSDADWAGDKDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANT 1364

[Close]

BLAST of Cmc08g0228921 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 3.5e-47
Identity = 101/236 (42.80%), Postives = 142/236 (60.17%), Query Frame = 0


Query: 4    STYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLG 63
            S  D S+F  +    I+ ++VYVDDI+ITGND   +      L   F  K+   L YFLG
Sbjct: 1112 SISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDLHYFLG 1171

Query: 64   IEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQL-VKEGKLCKDPERYRRL 123
            IE  R  + ++LSQR+Y LDLL+ T  L AKP  T M  + +L +  G    DP  YR +
Sbjct: 1172 IEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPTEYRGI 1231

Query: 124  VGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTR 183
            VG L YL  T+PD++Y+V+ +SQ+M  PT DHW A++++L YL   P  GI  K      
Sbjct: 1232 VGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKKGNTLS 1291

Query: 184  VECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQS 239
            +  +SDADWAG  +D  S++ Y V++G + +SW SKKQ  V RSS E+EYR++  +
Sbjct: 1292 LHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANT 1347

[Close]

BLAST of Cmc08g0228921 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-37
Identity = 83/215 (38.60%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 22  LVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYV 81
           L++YVDDI++TG+  + ++ L   L   F  KD+G + YFLGI++      ++LSQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 82  LDLLSETEKLGAKPSGT-LMMPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSV 141
             +L+    L  KP  T L +     V   K   DP  +R +VG L YLT+T+PDI+Y+V
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 142 SVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS 201
           ++V Q M  PT+  +  ++++L Y+K     G+    +    V+ F D+DWAG     RS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 202 SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM 236
           ++ +C F+G N++SW +K+Q  VSRSS E+EYRA+
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRAL 216

[Close]

BLAST of Cmc08g0228921 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.7e-31
Identity = 87/256 (33.98%), Postives = 145/256 (56.64%), Query Frame = 0


Query: 1    MQTSTY-----DHSIFYRR-SDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKD 60
            M++ TY     D  ++++R S+N  ++L++YVDD++I G D   I+ LK  L   F  KD
Sbjct: 978  MKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKD 1037

Query: 61   MGQLKYFLGIEVMRSK--KCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVK---- 120
            +G  +  LG++++R +  + ++LSQ KY+  +L       AKP  T +  + +L K    
Sbjct: 1038 LGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCP 1097

Query: 121  -----EGKLCKDPERYRRLVGKLNY-LTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQIL 180
                 +G + K P  Y   VG L Y +  T+PDIA++V VVS+F+ +P  +HW AV+ IL
Sbjct: 1098 TTVEEKGNMAKVP--YSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWIL 1157

Query: 181  CYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNV 239
             YL+   G  + +       ++ ++DAD AG  ++ +SS+ Y     G  +SW+SK Q  
Sbjct: 1158 RYLRGTTGDCLCF-GGSDPILKGYTDADMAGDIDNRKSSTGYLFTFSGGAISWQSKLQKC 1217

[Close]

BLAST of Cmc08g0228921 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26
Identity = 72/233 (30.90%), Postives = 132/233 (56.65%), Query Frame = 0


Query: 17   NGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLS 76
            N  + +++YVDD+VI   D + +++ K +L   F   D+ ++K+F+GI +   +  IYLS
Sbjct: 1079 NENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLS 1138

Query: 77   QRKYVLDLLSE--TEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYRRLVGKLNYLTM-TQ 136
            Q  YV  +LS+   E   A  +      N +L+   + C  P   R L+G L Y+ + T+
Sbjct: 1139 QSAYVKKILSKFNMENCNAVSTPLPSKINYELLNSDEDCNTP--CRSLIGCLMYIMLCTR 1198

Query: 137  PDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDH--GHTRVECFSDADW 196
            PD+  +V+++S++ S    + W  ++++L YLK      +++K +     ++  + D+DW
Sbjct: 1199 PDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLIFKKNLAFENKIIGYVDSDW 1258

Query: 197  AGSREDSRSSSEYCV-FVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVRNSM 244
            AGS  D +S++ Y       NL+ W +K+QN V+ SS E+EY A+ ++VR ++
Sbjct: 1259 AGSEIDRKSTTGYLFKMFDFNLICWNTKRQNSVAASSTEAEYMALFEAVREAL 1309

[Close]

BLAST of Cmc08g0228921 vs. ExPASy TrEMBL
Match: A0A5D3C204 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001030 PE=4 SV=1)

HSP 1 Score: 471.9 bits (1213), Expect = 1.7e-129
Identity = 235/242 (97.11%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
           MQ STYDHS+FYRRSDNGIVLLVVYVDD VITGNDA GISSLKTFLQGHFHTKDMGQLKY
Sbjct: 74  MQNSTYDHSVFYRRSDNGIVLLVVYVDDTVITGNDAWGISSLKTFLQGHFHTKDMGQLKY 133

Query: 61  FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 120
           FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR
Sbjct: 134 FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 193

Query: 121 RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 180
           RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH
Sbjct: 194 RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 253

Query: 181 TRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVR 240
           TRVECFSDADWAGSREDS SSS YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVR
Sbjct: 254 TRVECFSDADWAGSREDSISSSGYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSVR 313

Query: 241 NS 243
           N+
Sbjct: 314 NT 315

[Close]

BLAST of Cmc08g0228921 vs. ExPASy TrEMBL
Match: A0A6P6VCZ7 (uncharacterized protein LOC113719488 OS=Coffea arabica OX=13443 GN=LOC113719488 PE=4 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 1.1e-101
Identity = 186/239 (77.82%), Postives = 210/239 (87.87%), Query Frame = 0


Query: 1   MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
           MQ S  DHSIFYR S+ GI+LLVVYVDDIVITG+D+SGISSLK+FL   F+TKD+G LKY
Sbjct: 1   MQKSKSDHSIFYRHSNGGIILLVVYVDDIVITGSDSSGISSLKSFLHTQFYTKDLGMLKY 60

Query: 61  FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 120
           FLG+EV  SKK I+LSQRKYVLDLLSE+  LGAKP  T M+PN QL KEG+LC DPERYR
Sbjct: 61  FLGVEVSTSKKGIFLSQRKYVLDLLSESGNLGAKPCSTPMVPNLQLTKEGELCADPERYR 120

Query: 121 RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 180
           RL+GKLNYLT+T PDIAYSVSV+SQ+MSSPTVDHW AVEQ+L YLK APGRGILY +HGH
Sbjct: 121 RLIGKLNYLTVTHPDIAYSVSVLSQYMSSPTVDHWKAVEQVLHYLKCAPGRGILYGNHGH 180

Query: 181 TRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV 240
           TR+ECFSD+DWAG +ED RS+S YCVFVGGNLVSWKSKKQNVVSRSSAE+EYRAM +SV
Sbjct: 181 TRIECFSDSDWAGCKEDRRSTSGYCVFVGGNLVSWKSKKQNVVSRSSAEAEYRAMAKSV 239

[Close]

BLAST of Cmc08g0228921 vs. ExPASy TrEMBL
Match: A0A6J1DFP5 (uncharacterized protein LOC111020391 OS=Momordica charantia OX=3673 GN=LOC111020391 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 6.3e-100
Identity = 181/239 (75.73%), Postives = 209/239 (87.45%), Query Frame = 0


Query: 1   MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
           M+ S  +HS+FY++S++G++LLVVYVDDIVITGND+SGI SLK+FL   FHTKD+G LKY
Sbjct: 1   MKKSKSNHSVFYKKSESGVILLVVYVDDIVITGNDSSGILSLKSFLHSQFHTKDLGMLKY 60

Query: 61  FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKEGKLCKDPERYR 120
           FLGIEV R+KK I+LSQRKYVLDLL+ET KL AKP  T M+PN QL  EG+L KD E+YR
Sbjct: 61  FLGIEVTRNKKGIFLSQRKYVLDLLTETGKLAAKPRSTPMIPNLQLTMEGELLKDLEKYR 120

Query: 121 RLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGH 180
           RLVGKLNYLT+T+PDIAY VS++SQFMSSPT DHW A+E ILCYLK APGRG+LYKDHGH
Sbjct: 121 RLVGKLNYLTVTRPDIAYPVSIMSQFMSSPTTDHWIALEHILCYLKDAPGRGLLYKDHGH 180

Query: 181 TRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV 240
             +ECFSDADWAGS+E+ RS+S YCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM QSV
Sbjct: 181 LNIECFSDADWAGSKENRRSTSGYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMAQSV 239

[Close]

BLAST of Cmc08g0228921 vs. ExPASy TrEMBL
Match: A0A1S3Y520 (uncharacterized mitochondrial protein AtMg00810-like OS=Nicotiana tabacum OX=4097 GN=LOC107772364 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97
Identity = 177/240 (73.75%), Postives = 213/240 (88.75%), Query Frame = 0


Query: 1   MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
           M+ S  DH++FY++SD+GI+LLVVYVDDIVITG+D +GIS+LK+FL   F TKD+GQLKY
Sbjct: 46  MKKSNCDHTVFYKKSDDGILLLVVYVDDIVITGSDITGISTLKSFLHTQFQTKDLGQLKY 105

Query: 61  FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKE-GKLCKDPERY 120
           FLG+EV RSKK I+LSQRKY LDLL+ET KLG+KP    M+PN QLVKE G+L +DPE+Y
Sbjct: 106 FLGVEVTRSKKGIFLSQRKYTLDLLAETGKLGSKPCSMPMVPNTQLVKEDGELFEDPEKY 165

Query: 121 RRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHG 180
           RRLVGKLNYLT+T+PDIAYSVS+VSQFMSSPTV HWAA+EQILCYLK +PGRG++YK++ 
Sbjct: 166 RRLVGKLNYLTVTRPDIAYSVSIVSQFMSSPTVRHWAALEQILCYLKGSPGRGLVYKNNE 225

Query: 181 HTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV 240
           HT +ECF+DADWAGS+ D RS++ YCVFVGGNL+SWKSKKQNVVSRSSAE+EYRAM QSV
Sbjct: 226 HTNIECFTDADWAGSKADRRSTTGYCVFVGGNLISWKSKKQNVVSRSSAEAEYRAMAQSV 285

[Close]

BLAST of Cmc08g0228921 vs. ExPASy TrEMBL
Match: A0A1S4CYD8 (uncharacterized mitochondrial protein AtMg00810-like OS=Nicotiana tabacum OX=4097 GN=LOC107823985 PE=4 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 2.2e-97
Identity = 177/240 (73.75%), Postives = 213/240 (88.75%), Query Frame = 0


Query: 1   MQTSTYDHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKY 60
           M+ S  DH++FY++SD+GI+LLVVYVDDIVITG+D +GIS+LK+FL   F TKD+GQLKY
Sbjct: 1   MKKSNCDHTVFYKKSDDGILLLVVYVDDIVITGSDITGISTLKSFLHTQFQTKDLGQLKY 60

Query: 61  FLGIEVMRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQLVKE-GKLCKDPERY 120
           FLG+EV RSKK I+LSQRKY LDLL+ET KLG+KP    M+PN QLVKE G+L +DPE+Y
Sbjct: 61  FLGVEVTRSKKGIFLSQRKYTLDLLAETGKLGSKPCSMPMVPNTQLVKEDGELFEDPEKY 120

Query: 121 RRLVGKLNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHG 180
           RRLVGKLNYLT+T+PDIAYSVS+VSQFMSSPTV HWAA+EQILCYLK +PGRG++YK++ 
Sbjct: 121 RRLVGKLNYLTVTRPDIAYSVSIVSQFMSSPTVRHWAALEQILCYLKGSPGRGLVYKNNE 180

Query: 181 HTRVECFSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMTQSV 240
           HT +ECF+DADWAGS+ D RS++ YCVFVGGNL+SWKSKKQNVVSRSSAE+EYRAM QSV
Sbjct: 181 HTNIECFTDADWAGSKADRRSTTGYCVFVGGNLISWKSKKQNVVSRSSAEAEYRAMAQSV 240

[Close]

BLAST of Cmc08g0228921 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 196.1 bits (497), Expect = 3.5e-50
Identity = 101/231 (43.72%), Postives = 151/231 (65.37%), Query Frame = 0


Query: 7   DHSIFYRRSDNGIVLLVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEV 66
           DH+ F + +    + ++VYVDDI+I  N+ + +  LK+ L+  F  +D+G LKYFLG+E+
Sbjct: 265 DHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEI 324

Query: 67  MRSKKCIYLSQRKYVLDLLSETEKLGAKPSGTLMMPNQQL-VKEGKLCKDPERYRRLVGK 126
            RS   I + QRKY LDLL ET  LG KPS   M P+       G    D + YRRL+G+
Sbjct: 325 ARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGR 384

Query: 127 LNYLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVEC 186
           L YL +T+ DI+++V+ +SQF  +P + H  AV +IL Y+K   G+G+ Y      +++ 
Sbjct: 385 LMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQV 444

Query: 187 FSDADWAGSREDSRSSSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAMT 237
           FSDA +   ++  RS++ YC+F+G +L+SWKSKKQ VVS+SSAE+EYRA++
Sbjct: 445 FSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALS 495

[Close]

BLAST of Cmc08g0228921 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 1.0e-38
Identity = 83/215 (38.60%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 22  LVVYVDDIVITGNDASGISSLKTFLQGHFHTKDMGQLKYFLGIEVMRSKKCIYLSQRKYV 81
           L++YVDDI++TG+  + ++ L   L   F  KD+G + YFLGI++      ++LSQ KY 
Sbjct: 3   LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 82  LDLLSETEKLGAKPSGT-LMMPNQQLVKEGKLCKDPERYRRLVGKLNYLTMTQPDIAYSV 141
             +L+    L  KP  T L +     V   K   DP  +R +VG L YLT+T+PDI+Y+V
Sbjct: 63  EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKY-PDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 142 SVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFSDADWAGSREDSRS 201
           ++V Q M  PT+  +  ++++L Y+K     G+    +    V+ F D+DWAG     RS
Sbjct: 123 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 182

Query: 202 SSEYCVFVGGNLVSWKSKKQNVVSRSSAESEYRAM 236
           ++ +C F+G N++SW +K+Q  VSRSS E+EYRA+
Sbjct: 183 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRAL 216

[Close]

BLAST of Cmc08g0228921 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 63.5 bits (153), Expect = 2.7e-10
Identity = 28/81 (34.57%), Postives = 49/81 (60.49%), Query Frame = 0


Query: 128 YLTMTQPDIAYSVSVVSQFMSSPTVDHWAAVEQILCYLKAAPGRGILYKDHGHTRVECFS 187
           YLT+T+PD+ ++V+ +SQF S+       AV ++L Y+K   G+G+ Y      +++ F+
Sbjct: 2   YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61

Query: 188 DADWAGSREDSRSSSEYCVFV 209
           D+DWA   +  RS + +C  V
Sbjct: 62  DSDWASCPDTRRSVTGFCSLV 82

The following BLAST results are available for this feature:

BLAST of Cmc08g0228921 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK05415.1	3.5e-129	97.11	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
XP_031744754.1	7.3e-119	91.63	uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]	[more]
XP_031744758.1	7.3e-119	91.63	uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]	[more]
XP_031744753.1	7.3e-119	91.63	uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]	[more]
XP_031744755.1	7.3e-119	91.63	uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]	[more]

BLAST of Cmc08g0228921 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	3.2e-48	44.07	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.5e-47	42.80	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P92519	1.5e-37	38.60	Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ...	[more]
P10978	2.7e-31	33.98	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.2e-26	30.90	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]

BLAST of Cmc08g0228921 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C204	1.7e-129	97.11	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A6P6VCZ7	1.1e-101	77.82	uncharacterized protein LOC113719488 OS=Coffea arabica OX=13443 GN=LOC113719488 ...	[more]
A0A6J1DFP5	6.3e-100	75.73	uncharacterized protein LOC111020391 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A1S3Y520	2.2e-97	73.75	uncharacterized mitochondrial protein AtMg00810-like OS=Nicotiana tabacum OX=409...	[more]
A0A1S4CYD8	2.2e-97	73.75	uncharacterized mitochondrial protein AtMg00810-like OS=Nicotiana tabacum OX=409...	[more]

BLAST of Cmc08g0228921 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	3.5e-50	43.72	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	1.0e-38	38.60	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	2.7e-10	34.57	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 3..95 e-value: 6.7E-16 score: 58.6
None	No IPR available	PANTHER	PTHR11439:SF335	SUBFAMILY NOT NAMED	coord: 44..233
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 44..233
None	No IPR available	CDD	cd09272	RNase_HI_RT_Ty1	coord: 184..240 e-value: 5.20611E-23 score: 89.0645
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 13..232

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0228921.1	Cmc08g0228921.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0007165	signal transduction
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding