Cmc08g0228421 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGACTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAACCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACATGGTGACACAGTTGAATCGTATGCCTTGATTCAAAGATTCTTTGATAAATTGGTTGAATCTAACCCAGGTATGATTAGTTTTGTATATCAAATTTAAATTGATTTGCAGATAGATGTGGATAGACTAATATCACAGTTTATCTAGATAGACTAATATTGACATCTTTCATATTCTTTCTATTCTTTTTTGTTTGTGCTGATAGAAATGTGTTTTTAATTATTATAGGATGATAGTGGTCATTTCAAGTTTTACTTTATGGCTTTTGATGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTATTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAATAGCCTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGTATCATGGACATGGTTTTTTGAGAAGATATGA ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGACTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAACCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACATGGTGACACAGTTGAATCGTATGCCTTGATTCAAAGATTCTTTGATAAATTGGATGATAGTGGTCATTTCAAGTTTTACTTTATGGCTTTTGATGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTATTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAATAGCCTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGTATCATGGACATGGTTTTTTGAGAAGATATGA ATGTCTACTGATCGTTCCATTCCTAAAGAGATTGTGCATAAGACTCGTACAAATCTTGGAGTTAATATAAGTTACCAAAAACCTTGGAGGGCAAAAGAACATATGGTAAAGATATTACATGGTGACACAGTTGAATCGTATGCCTTGATTCAAAGATTCTTTGATAAATTGGATGATAGTGGTCATTTCAAGTTTTACTTTATGGCTTTTGATGCATCAATTGAGGGGTGGAAATATTGTAGACCTATTATTTCTATTGATGGGACATTTTTGAAGTGTAAGTTTGGTGGCATCCTATTAATAGCCTCATCACAAGATGGTAACAATCAAATCTTCCCTCTTGCTTTTGCCATTGTAGATTCTGAAAATGATGTATCATGGACATGGTTTTTTGAGAAGATATGA MSTDRSIPKEIVHKTRTNLGVNISYQKPWRAKEHMVKILHGDTVESYALIQRFFDKLDDSGHFKFYFMAFDASIEGWKYCRPIISIDGTFLKCKFGGILLIASSQDGNNQIFPLAFAIVDSENDVSWTWFFEKI Homology
BLAST of Cmc08g0228421 vs. NCBI nr
Match: KAA0036500.1 (protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa] >TYJ99981.1 protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]) HSP 1 Score: 244.6 bits (623), Expect = 4.9e-61 Identity = 123/147 (83.67%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of Cmc08g0228421 vs. NCBI nr
Match: KAA0035384.1 (protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa] >TYK03496.1 protein FAR-RED IMPAIRED RESPONSE 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 240.7 bits (613), Expect = 7.1e-60 Identity = 119/147 (80.95%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of Cmc08g0228421 vs. NCBI nr
Match: KAA0047748.1 (uncharacterized protein E6C27_scaffold1059G00070 [Cucumis melo var. makuwa] >TYK02382.1 uncharacterized protein E5676_scaffold155G00850 [Cucumis melo var. makuwa]) HSP 1 Score: 240.0 bits (611), Expect = 1.2e-59 Identity = 119/147 (80.95%), Postives = 121/147 (82.31%), Query Frame = 0
BLAST of Cmc08g0228421 vs. NCBI nr
Match: KAA0050206.1 (uncharacterized protein E6C27_scaffold355G00380 [Cucumis melo var. makuwa] >TYJ98206.1 uncharacterized protein E5676_scaffold180G00990 [Cucumis melo var. makuwa]) HSP 1 Score: 236.1 bits (601), Expect = 1.7e-58 Identity = 117/147 (79.59%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of Cmc08g0228421 vs. NCBI nr
Match: TYK02872.1 (protein FAR1-RELATED SEQUENCE 4 [Cucumis melo var. makuwa]) HSP 1 Score: 230.3 bits (586), Expect = 9.6e-57 Identity = 113/141 (80.14%), Postives = 118/141 (83.69%), Query Frame = 0
BLAST of Cmc08g0228421 vs. ExPASy TrEMBL
Match: A0A5D3BMN4 (Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00260 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 2.4e-61 Identity = 123/147 (83.67%), Postives = 123/147 (83.67%), Query Frame = 0
BLAST of Cmc08g0228421 vs. ExPASy TrEMBL
Match: A0A5D3BZ76 (Protein FAR-RED IMPAIRED RESPONSE 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G001160 PE=4 SV=1) HSP 1 Score: 240.7 bits (613), Expect = 3.4e-60 Identity = 119/147 (80.95%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of Cmc08g0228421 vs. ExPASy TrEMBL
Match: A0A5D3BUA2 (MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00850 PE=4 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 5.8e-60 Identity = 119/147 (80.95%), Postives = 121/147 (82.31%), Query Frame = 0
BLAST of Cmc08g0228421 vs. ExPASy TrEMBL
Match: A0A5D3BGP1 (MULE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold180G00990 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 8.4e-59 Identity = 117/147 (79.59%), Postives = 120/147 (81.63%), Query Frame = 0
BLAST of Cmc08g0228421 vs. ExPASy TrEMBL
Match: A0A5D3BVN2 (Protein FAR1-RELATED SEQUENCE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold968G00010 PE=4 SV=1) HSP 1 Score: 230.3 bits (586), Expect = 4.6e-57 Identity = 113/141 (80.14%), Postives = 118/141 (83.69%), Query Frame = 0
BLAST of Cmc08g0228421 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase ) HSP 1 Score: 70.5 bits (171), Expect = 1.2e-12 Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0
BLAST of Cmc08g0228421 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase ) HSP 1 Score: 67.0 bits (162), Expect = 1.3e-11 Identity = 38/113 (33.63%), Postives = 61/113 (53.98%), Query Frame = 0
BLAST of Cmc08g0228421 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase ) HSP 1 Score: 63.9 bits (154), Expect = 1.1e-10 Identity = 30/68 (44.12%), Postives = 41/68 (60.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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