Cmc08g0228141 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0228141
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	TTF-type domain-containing protein
Location	CMiso1.1chr08: 21910604 .. 21911296 (-)
RNA-Seq Expression	Cmc08g0228141
Synteny	Cmc08g0228141

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTGGTCAAGATTTGTAATGTAAGATTACAGTCAATGAGAGAGTCAGGATGGCAATCATTGTTGGATGAAGTTTTAAGTTTTTGTAATAAGCATGGTATTCTAATGCTTAAAATAGATGATGCATTTTTAGTTCGAGGGAGGAAAAGACGAAATTCTCAAGAAATCACAAATATATATCATTATCGTGTTGAGATTTTTTATGCAGTTATTGACATGCAACTTCAAGAGTTAAATAATCGTTTCGCTAAAAAAAGCACTGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTGCTTTTGACAGACAAAAGCTAATTTGCCTTGCACAATTTTATCCTAGAGATTTTTCAACTACGGGGCTTCTTATTCTTGAAGATCAACTTCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTTGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGATAATAGCTAAAGATAAAGTTTACCCATTAGTCTATCTGTTGCTTACCTTAGCGTTGATCTTACCAGTTACAACGGCTACCGTGGAGAGGACATTTTCTGCTATGAGCATTATAGAGACTCAGTTGCATAATCGAATGGAAAATCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTGTTTGATAAGATAGATATTTAA

mRNA sequence

ATGAATTTGGTCAAGATTTGTAATGTAAGATTACAGTCAATGAGAGAGTCAGGATGGCAATCATTGTTGGATGAAGTTTTAAGTTTTTGTAATAAGCATGGTATTCTAATGCTTAAAATAGATGATGCATTTTTAGTTCGAGGGAGGAAAAGACGAAATTCTCAAGAAATCACAAATATATATCATTATCGTGTTGAGATTTTTTATGCAGTTATTGACATGCAACTTCAAGAGTTAAATAATCGTTTCGCTAAAAAAAGCACTGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTGCTTTTGACAGACAAAAGCTAATTTGCCTTGCACAATTTTATCCTAGAGATTTTTCAACTACGGGGCTTCTTATTCTTGAAGATCAACTTCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTTGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGATAATAGCTAAAGATAAAGTTTACCCATTAGTCTATCTGTTGCTTACCTTAGCGTTGATCTTACCAGTTACAACGGCTACCGTGGAGAGGACATTTTCTGCTATGAGCATTATAGAGACTCAGTTGCATAATCGAATGGAAAATCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTGTTTGATAAGATAGATATTTAA

Coding sequence (CDS)

ATGAATTTGGTCAAGATTTGTAATGTAAGATTACAGTCAATGAGAGAGTCAGGATGGCAATCATTGTTGGATGAAGTTTTAAGTTTTTGTAATAAGCATGGTATTCTAATGCTTAAAATAGATGATGCATTTTTAGTTCGAGGGAGGAAAAGACGAAATTCTCAAGAAATCACAAATATATATCATTATCGTGTTGAGATTTTTTATGCAGTTATTGACATGCAACTTCAAGAGTTAAATAATCGTTTCGCTAAAAAAAGCACTGAGTTGCTTCTTTGTGTGGCATGTCTCAATCCAAGCAACTCATTTACTGCTTTTGACAGACAAAAGCTAATTTGCCTTGCACAATTTTATCCTAGAGATTTTTCAACTACGGGGCTTCTTATTCTTGAAGATCAACTTCAAAATTACATCATTGATGTGTGTTCAGATAATATGTTTGTTGGGTTAACAAGTATTGGTGATCTTTCTCAAAAAATGGTGATAATAGCTAAAGATAAAGTTTACCCATTAGTCTATCTGTTGCTTACCTTAGCGTTGATCTTACCAGTTACAACGGCTACCGTGGAGAGGACATTTTCTGCTATGAGCATTATAGAGACTCAGTTGCATAATCGAATGGAAAATCAATGGATGAATGATTGTCTTGTAGCATATATTGAGAGAGATTTGTTTGATAAGATAGATATTTAA

Protein sequence

MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNIYHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLALILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKIDI

Homology

[Close]

BLAST of Cmc08g0228141 vs. NCBI nr
Match: TYK00355.1 (copia-type polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 294.3 bits (752), Expect = 9.3e-76
Identity = 152/182 (83.52%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 48  GRKRRNSQEITNIYHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFD 107
           GR R    + +   +   ++F+  IDMQLQE NNRF +KSTELLLCVACLNPSNSFTAFD
Sbjct: 71  GRMREGHMDASGFLYASADVFF--IDMQLQESNNRFTEKSTELLLCVACLNPSNSFTAFD 130

Query: 108 RQKLICLAQFYPRDFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDK 167
           RQKLICLAQFYPRDFSTT LLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVI AKDK
Sbjct: 131 RQKLICLAQFYPRDFSTTELLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDK 190

Query: 168 VYPLVYLLLTLALILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDK 227
           VYPLVY LLTLALILPVT ATVERTFSAMSII+TQL NRME+QWMNDCLVAYIERDLFDK
Sbjct: 191 VYPLVYRLLTLALILPVTMATVERTFSAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDK 250

Query: 228 ID 230
           ID
Sbjct: 251 ID 250

[Close]

BLAST of Cmc08g0228141 vs. NCBI nr
Match: XP_021829887.1 (uncharacterized protein LOC110770113 [Prunus avium])

HSP 1 Score: 292.7 bits (748), Expect = 2.7e-75
Identity = 147/229 (64.19%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           M+LVKIC  RLQSMR++GW SLLD+V  FC K+ I + K+DD F   GR +R +Q ITN+
Sbjct: 170 MDLVKICKGRLQSMRDNGWDSLLDQVSFFCGKYHIEIPKMDDIFSSGGRPKRKAQPITNL 229

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HYRV++F  VID+QL+ELN+RF +K+TELLLC+ACL+PSNSF+AFD+ KL+ LAQFY R
Sbjct: 230 HHYRVDLFVDVIDIQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYQR 289

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS   L +LEDQL+NYI DV S+N F  L  I DL+QKMV   KDK+YPLVYLLLTLAL
Sbjct: 290 DFSEHDLKLLEDQLENYIWDVSSNNQFTELKGITDLAQKMVETNKDKIYPLVYLLLTLAL 349

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKID 230
           ILPV TA+VER FSAM+I++ +L NR+ + WMNDCLVAYIE+D+F+ ID
Sbjct: 350 ILPVATASVERVFSAMNIVKNRLRNRIGDLWMNDCLVAYIEKDIFNSID 398

[Close]

BLAST of Cmc08g0228141 vs. NCBI nr
Match: XP_021827657.1 (zinc finger MYM-type protein 1-like [Prunus avium])

HSP 1 Score: 290.4 bits (742), Expect = 1.3e-74
Identity = 147/229 (64.19%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           M+LVKIC  RLQSMR++GW SLLD+V  FC K+ I + K+DD F   GR +R +Q ITN+
Sbjct: 218 MDLVKICKGRLQSMRDNGWDSLLDQVSFFCGKYHIEIPKMDDIFSSGGRPKRKAQPITNL 277

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HYRV++F  VID+QL+ELN+RF +K+TELLLC+ACL+PSNSF+AFD+ KL+ LAQFYPR
Sbjct: 278 HHYRVDLFVDVIDIQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYPR 337

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS   L +LEDQL+NYI DV S+N F  L  I DL+QKMV   KDK+YPLVYLLLTLAL
Sbjct: 338 DFSKHDLKLLEDQLENYIWDVSSNNEFTELKGISDLAQKMVETNKDKIYPLVYLLLTLAL 397

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKID 230
           IL V TA+VER FSAM+I++ +L NRM + WMND LVAYIE+D+F+ ID
Sbjct: 398 ILSVATASVERVFSAMNIVKNRLRNRMGDLWMNDSLVAYIEKDIFNSID 446

[Close]

BLAST of Cmc08g0228141 vs. NCBI nr
Match: XP_024155975.1 (zinc finger MYM-type protein 1-like [Rosa chinensis])

HSP 1 Score: 288.1 bits (736), Expect = 6.6e-74
Identity = 138/229 (60.26%), Postives = 186/229 (81.22%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           MNLV +C  RLQ+MRESGW SLL ++  FC KH I +L +D+ F+ +G+ +RN+Q ITN+
Sbjct: 546 MNLVTVCKERLQAMRESGWDSLLAQITIFCEKHSIEVLNMDECFVAQGKSKRNAQVITNL 605

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HYRV++FY VID QLQEL++RF +K+TELLLC++CLNP NSF+AFD++KLI LAQ+YP+
Sbjct: 606 HHYRVQLFYTVIDNQLQELDDRFNEKNTELLLCMSCLNPRNSFSAFDKEKLIKLAQYYPQ 665

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS   L +L+DQL+NYI+D+ S+  F  L  I DL++KMV   KD  YPLVYLLLTLAL
Sbjct: 666 DFSAHDLEVLDDQLENYIVDMRSNIEFFELKGITDLAKKMVQTKKDVTYPLVYLLLTLAL 725

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKID 230
           ILPV TA+VER FSAM+I++T+L +RM +++MNDCL++YIE+D+F  ID
Sbjct: 726 ILPVATASVERVFSAMNIVKTRLRSRMGDEFMNDCLISYIEKDIFTSID 774

[Close]

BLAST of Cmc08g0228141 vs. NCBI nr
Match: XP_024172313.1 (zinc finger MYM-type protein 1-like [Rosa chinensis])

HSP 1 Score: 287.3 bits (734), Expect = 1.1e-73
Identity = 138/229 (60.26%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           MNLV +C  RLQ+MRESGW SLL ++  FC KH I +L +D+ F+ +G+ +RN+Q ITN+
Sbjct: 546 MNLVTVCKERLQAMRESGWDSLLAQITIFCEKHSIEVLNMDECFVAQGKSKRNAQVITNL 605

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HYRV++FY VID QLQELN+RF +K+TELLLC++CLNP NSF+AFD++KLI LAQ+YP+
Sbjct: 606 HHYRVQLFYTVIDNQLQELNDRFNEKNTELLLCMSCLNPRNSFSAFDKEKLIKLAQYYPQ 665

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS     +L+DQL+NYI+D+ S+  F  L  I DL++KMV   KD  YPLVYLLLTLAL
Sbjct: 666 DFSAHDPEVLDDQLENYIVDMRSNIEFFELKGITDLAKKMVQTKKDVTYPLVYLLLTLAL 725

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKID 230
           ILPV TA+VER FSAM+I++T+L +RM +++MNDCL++YIE+D+F  ID
Sbjct: 726 ILPVATASVERVFSAMNIVKTRLRSRMGDEFMNDCLISYIEKDIFTSID 774

[Close]

BLAST of Cmc08g0228141 vs. ExPASy TrEMBL
Match: A0A5D3BMQ7 (Copia-type polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00190 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 4.5e-76
Identity = 152/182 (83.52%), Postives = 161/182 (88.46%), Query Frame = 0


Query: 48  GRKRRNSQEITNIYHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFD 107
           GR R    + +   +   ++F+  IDMQLQE NNRF +KSTELLLCVACLNPSNSFTAFD
Sbjct: 71  GRMREGHMDASGFLYASADVFF--IDMQLQESNNRFTEKSTELLLCVACLNPSNSFTAFD 130

Query: 108 RQKLICLAQFYPRDFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDK 167
           RQKLICLAQFYPRDFSTT LLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVI AKDK
Sbjct: 131 RQKLICLAQFYPRDFSTTELLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVITAKDK 190

Query: 168 VYPLVYLLLTLALILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDK 227
           VYPLVY LLTLALILPVT ATVERTFSAMSII+TQL NRME+QWMNDCLVAYIERDLFDK
Sbjct: 191 VYPLVYRLLTLALILPVTMATVERTFSAMSIIKTQLRNRMEDQWMNDCLVAYIERDLFDK 250

Query: 228 ID 230
           ID
Sbjct: 251 ID 250

[Close]

BLAST of Cmc08g0228141 vs. ExPASy TrEMBL
Match: A0A6P5TRY7 (uncharacterized protein LOC110770113 OS=Prunus avium OX=42229 GN=LOC110770113 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.3e-75
Identity = 147/229 (64.19%), Postives = 185/229 (80.79%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           M+LVKIC  RLQSMR++GW SLLD+V  FC K+ I + K+DD F   GR +R +Q ITN+
Sbjct: 170 MDLVKICKGRLQSMRDNGWDSLLDQVSFFCGKYHIEIPKMDDIFSSGGRPKRKAQPITNL 229

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HYRV++F  VID+QL+ELN+RF +K+TELLLC+ACL+PSNSF+AFD+ KL+ LAQFY R
Sbjct: 230 HHYRVDLFVDVIDIQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYQR 289

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS   L +LEDQL+NYI DV S+N F  L  I DL+QKMV   KDK+YPLVYLLLTLAL
Sbjct: 290 DFSEHDLKLLEDQLENYIWDVSSNNQFTELKGITDLAQKMVETNKDKIYPLVYLLLTLAL 349

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKID 230
           ILPV TA+VER FSAM+I++ +L NR+ + WMNDCLVAYIE+D+F+ ID
Sbjct: 350 ILPVATASVERVFSAMNIVKNRLRNRIGDLWMNDCLVAYIEKDIFNSID 398

[Close]

BLAST of Cmc08g0228141 vs. ExPASy TrEMBL
Match: A0A6P5TKH2 (zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110768262 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.5e-75
Identity = 147/229 (64.19%), Postives = 184/229 (80.35%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           M+LVKIC  RLQSMR++GW SLLD+V  FC K+ I + K+DD F   GR +R +Q ITN+
Sbjct: 218 MDLVKICKGRLQSMRDNGWDSLLDQVSFFCGKYHIEIPKMDDIFSSGGRPKRKAQPITNL 277

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HYRV++F  VID+QL+ELN+RF +K+TELLLC+ACL+PSNSF+AFD+ KL+ LAQFYPR
Sbjct: 278 HHYRVDLFVDVIDIQLRELNDRFNEKNTELLLCMACLSPSNSFSAFDKAKLMRLAQFYPR 337

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS   L +LEDQL+NYI DV S+N F  L  I DL+QKMV   KDK+YPLVYLLLTLAL
Sbjct: 338 DFSKHDLKLLEDQLENYIWDVSSNNEFTELKGISDLAQKMVETNKDKIYPLVYLLLTLAL 397

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKID 230
           IL V TA+VER FSAM+I++ +L NRM + WMND LVAYIE+D+F+ ID
Sbjct: 398 ILSVATASVERVFSAMNIVKNRLRNRMGDLWMNDSLVAYIEKDIFNSID 446

[Close]

BLAST of Cmc08g0228141 vs. ExPASy TrEMBL
Match: A0A2N9GI12 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26932 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 143/229 (62.45%), Postives = 181/229 (79.04%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           + LV +   RLQ MR++GW+SLL EVL FC+KH I +L +D+ F+V GR RR + +ITN+
Sbjct: 582 ITLVNMSKKRLQMMRDNGWESLLAEVLLFCDKHDIPILNMDEIFVVGGRLRRQTPQITNL 641

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +H+RVE+FY VIDMQLQELNNRF++ +TELLLC+ACLNPSNSF AFD+QKLI LA+ YP 
Sbjct: 642 HHFRVELFYTVIDMQLQELNNRFSEANTELLLCMACLNPSNSFCAFDKQKLIRLAELYPY 701

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS + L+ L+ QLQNYI+D+ S++MF+ L  I +L++KMV   KD  YPLVYLL+ L L
Sbjct: 702 DFSKSDLMALDIQLQNYIVDLQSNDMFIELNGIDELARKMVETEKDVTYPLVYLLVKLVL 761

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKID 230
            LPV TATVER+FSAM  I+ QL NRM +QWMNDCLV YIE D+FD ID
Sbjct: 762 TLPVATATVERSFSAMKYIKNQLRNRMGDQWMNDCLVTYIESDVFDSID 810

[Close]

BLAST of Cmc08g0228141 vs. ExPASy TrEMBL
Match: A0A2N9EFR8 (TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1504 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.4e-74
Identity = 143/229 (62.45%), Postives = 181/229 (79.04%), Query Frame = 0


Query: 1    MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
            + LV +   RLQ MR++GW+SLL EVL FC+KH I +L +D+ F+V GR RR + +ITN+
Sbjct: 1020 ITLVNMSKKRLQMMRDNGWESLLAEVLLFCDKHDIPILNMDEIFVVGGRLRRQTPQITNL 1079

Query: 61   YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
            +H+RVE+FY VIDMQLQELNNRF++ +TELLLC+ACLNPSNSF AFD+QKLI LA+ YP 
Sbjct: 1080 HHFRVELFYTVIDMQLQELNNRFSEANTELLLCMACLNPSNSFCAFDKQKLIRLAELYPY 1139

Query: 121  DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
            DFS + L+ L+ QLQNYI+D+ S++MF+ L  I +L++KMV   KD  YPLVYLL+ L L
Sbjct: 1140 DFSESDLMALDIQLQNYIVDLQSNDMFIELNGIDELARKMVETEKDVTYPLVYLLVKLVL 1199

Query: 181  ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKID 230
             LPV TATVER+FSAM  I+ QL NRM +QWMNDCLV YIE D+FD ID
Sbjct: 1200 TLPVATATVERSFSAMKYIKNQLRNRMGDQWMNDCLVTYIESDVFDSID 1248

[Close]

BLAST of Cmc08g0228141 vs. TAIR 10
Match: AT1G19260.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 195.3 bits (495), Expect = 5.5e-50
Identity = 100/228 (43.86%), Postives = 153/228 (67.11%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           ++LVK    +LQ +R+ GW + + +V SF  K+   MLK+++ F V  R+ R    ITN+
Sbjct: 524 ISLVKTTKCQLQKVRDDGWDAFMAKVSSFSEKNNTGMLKMEEEF-VDSRRPRKKTGITNL 583

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HY+V+ FY V+DMQLQE N+RF + ++ELL+C++ L+P +SF  FD+  L+ L +FYP 
Sbjct: 584 HHYKVDCFYTVLDMQLQEFNDRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPD 643

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS      L+ QL+ Y+ +V +D  F  L  +GDL++ MV   K   +PLVY LL ++L
Sbjct: 644 DFSFVERRSLDHQLEIYLDNVKNDERFTDLKCLGDLARVMVETRKHLSHPLVYRLLKVSL 703

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKI 229
           ILPV TATVER FSAM+ ++T L NR+ + +++DCLV +IE+   + +
Sbjct: 704 ILPVATATVERCFSAMNFVKTTLRNRIGDMFLSDCLVCFIEKQALNTV 750

[Close]

BLAST of Cmc08g0228141 vs. TAIR 10
Match: AT3G29765.1 (General transcription factor 2-related zinc finger protein )

HSP 1 Score: 190.7 bits (483), Expect = 1.3e-48
Identity = 100/228 (43.86%), Postives = 150/228 (65.79%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           ++LVK    +LQ +R+ GW + + EV SF  K    MLK+++ F V  R+ R    ITN+
Sbjct: 291 ISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKTNTGMLKMEEEF-VDSRRPRKKTGITNL 350

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HY+V+ FY V+DMQLQE N+ F + ++ELL+C++ L+P +SF  FD+  L+ L +FYP 
Sbjct: 351 HHYKVDCFYTVLDMQLQEFNDCFDELNSELLICMSSLSPIDSFRQFDKSMLVRLTEFYPD 410

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           DFS      L+ QL+ Y+ +V +D  F  L  +GDL++ MV   K   +PLVY LL L+L
Sbjct: 411 DFSFVERRSLDHQLEIYLDNVKNDERFTDLEHLGDLARVMVETRKHLSHPLVYRLLKLSL 470

Query: 181 ILPVTTATVERTFSAMSIIETQLHNRMENQWMNDCLVAYIERDLFDKI 229
           ILPV TATV R FSAM+ ++T L NR  + +++DCLV +IE+ + + +
Sbjct: 471 ILPVATATVVRCFSAMNFVKTTLRNRFGDVFLSDCLVCFIEKQVLNTV 517

[Close]

BLAST of Cmc08g0228141 vs. TAIR 10
Match: AT4G09660.1 (CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Arabidopsis thaliana protein match is: TTF-type zinc finger protein with HAT dimerisation domain (TAIR:AT1G19260.1); Has 839 Blast hits to 796 proteins in 42 species: Archae - 0; Bacteria - 0; Metazoa - 438; Fungi - 0; Plants - 401; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42
Identity = 91/196 (46.43%), Postives = 130/196 (66.33%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           ++LVK    +LQ +R+ GW + + EV SF  K+   MLK+++ F V  R+ R    ITN+
Sbjct: 468 ISLVKTTKCQLQKVRDDGWDAFMAEVSSFSEKNNTAMLKMEEEF-VDSRRPRKKSGITNL 527

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HY+V+ FY V+DMQLQE N+RF + ++ELL+C++ L+P +SF  FD+  L+ L +FYP 
Sbjct: 528 HHYKVDCFYTVLDMQLQEFNDRFDEVNSELLICMSSLSPIDSFCQFDKSMLVRLTEFYPD 587

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLAL 180
           +FS      L+ QL+ Y+ +V +D  F  L   GDL++ MV   K   +PLVY LL L+L
Sbjct: 588 EFSFVERRSLDHQLEIYLDNVKNDERFTDLKCFGDLARVMVETRKHLSHPLVYRLLKLSL 647

Query: 181 ILPVTTATVERTFSAM 197
           ILPV TATVER FSAM
Sbjct: 648 ILPVATATVERCFSAM 662

[Close]

BLAST of Cmc08g0228141 vs. TAIR 10
Match: AT1G41920.1 (General transcription factor 2-related zinc finger protein )

HSP 1 Score: 133.3 bits (334), Expect = 2.5e-31
Identity = 67/147 (45.58%), Postives = 96/147 (65.31%), Query Frame = 0


Query: 1   MNLVKICNVRLQSMRESGWQSLLDEVLSFCNKHGILMLKIDDAFLVRGRKRRNSQEITNI 60
           M+LVK    +L  +R+ GW SL++EV SFC KH I ++ +D  F V  R  R    +TN 
Sbjct: 349 MSLVKSTKQQLCKLRDDGWDSLVNEVFSFCKKHDIELVIMDGEF-VNPRNPRKRSNMTNF 408

Query: 61  YHYRVEIFYAVIDMQLQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPR 120
           +HY+VE FY ++DMQ+QE N+RF + +TELL CVA L+P +SF  FD+ K++ L++FYP+
Sbjct: 409 HHYQVECFYTILDMQIQEFNDRFDEVNTELLSCVASLSPIDSFHEFDQLKVLRLSEFYPQ 468

Query: 121 DFSTTGLLILEDQLQNYIIDVCSDNMF 148
           DF+      LE QL  YI ++  D  F
Sbjct: 469 DFTHVDRRSLEHQLGLYIDNIREDERF 494

[Close]

BLAST of Cmc08g0228141 vs. TAIR 10
Match: AT2G06541.1 (TTF-type zinc finger protein with HAT dimerisation domain )

HSP 1 Score: 124.8 bits (312), Expect = 9.1e-29
Identity = 68/153 (44.44%), Postives = 103/153 (67.32%), Query Frame = 0


Query: 76  LQELNNRFAKKSTELLLCVACLNPSNSFTAFDRQKLICLAQFYPRDFSTTGLLILEDQLQ 135
           L E N+ F + +TELL CVA L+P++ F  FD+ K++ LA+FYP+DF+      LE QL 
Sbjct: 422 LLEYNDCFDEVNTELLGCVASLSPTDLFREFDQLKVMRLAEFYPQDFTRVDWRSLEHQLG 481

Query: 136 NYIIDVCSDNMFVGLTSIGDLSQKMVIIAKDKVYPLVYLLLTLALILPVTTATVERTFSA 195
            YI ++  D+ F  L S+GDL++ M+   K   +P VY LL + L LP+ TATVER FSA
Sbjct: 482 LYIDNIREDDRFANLKSLGDLARVMIETRKHLSHPQVYRLLKVVLTLPIATATVERCFSA 541

Query: 196 MSIIETQLHNRMENQWMNDCLVAYIERDLFDKI 229
            ++++T L NR+ +Q++ND +V  ++R+LFD +
Sbjct: 542 -TVVKTTLRNRISDQFLNDYVVCLVKRELFDTV 573

The following BLAST results are available for this feature:

BLAST of Cmc08g0228141 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK00355.1	9.3e-76	83.52	copia-type polyprotein [Cucumis melo var. makuwa]	[more]
XP_021829887.1	2.7e-75	64.19	uncharacterized protein LOC110770113 [Prunus avium]	[more]
XP_021827657.1	1.3e-74	64.19	zinc finger MYM-type protein 1-like [Prunus avium]	[more]
XP_024155975.1	6.6e-74	60.26	zinc finger MYM-type protein 1-like [Rosa chinensis]	[more]
XP_024172313.1	1.1e-73	60.26	zinc finger MYM-type protein 1-like [Rosa chinensis]	[more]

BLAST of Cmc08g0228141 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Cmc08g0228141 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BMQ7	4.5e-76	83.52	Copia-type polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]
A0A6P5TRY7	1.3e-75	64.19	uncharacterized protein LOC110770113 OS=Prunus avium OX=42229 GN=LOC110770113 PE...	[more]
A0A6P5TKH2	6.5e-75	64.19	zinc finger MYM-type protein 1-like OS=Prunus avium OX=42229 GN=LOC110768262 PE=...	[more]
A0A2N9GI12	1.4e-74	62.45	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26932 PE=4 SV=1	[more]
A0A2N9EFR8	1.4e-74	62.45	TTF-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1504 ...	[more]

BLAST of Cmc08g0228141 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19260.1	5.5e-50	43.86	TTF-type zinc finger protein with HAT dimerisation domain	[more]
AT3G29765.1	1.3e-48	43.86	General transcription factor 2-related zinc finger protein	[more]
AT4G09660.1	1.1e-42	46.43	CONTAINS InterPro DOMAIN/s: Zinc finger, TTF-type (InterPro:IPR006580); BEST Ara...	[more]
AT1G41920.1	2.5e-31	45.58	General transcription factor 2-related zinc finger protein	[more]
AT2G06541.1	9.1e-29	44.44	TTF-type zinc finger protein with HAT dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 166..224 e-value: 2.2E-7 score: 30.6
None	No IPR available	PANTHER	PTHR11697:SF107	TRANSCRIPTION FACTOR-LIKE ZINC FINGER PROTEIN, PUTATIVE-RELATED	coord: 2..228
None	No IPR available	PANTHER	PTHR11697	GENERAL TRANSCRIPTION FACTOR 2-RELATED ZINC FINGER PROTEIN	coord: 2..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0228141.1	Cmc08g0228141.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016020	membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0046983	protein dimerization activity