Cmc08g0227931 (gene) Melon (Charmono) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCGGTACCAAGTGATGATCTTCCCATTGTTGTTCGCAAAGGTAAACACAAGTGTACTTACCCTGTTTCTTCTTTTATATTTTATCACCAATTGTCTCCTCCCACTTATGCTTTTATTACAACTCTGGACTCCACATCTATTCCTAACACTGTTCATGAACCTTTATCTCATCCTCGCTGGCAAAATGCAATGATTGAGGAGATGACTACTTTTGATGATAATGGTACTTGGGATTTAGTATCTCGTCCTGCAGGAAAGAAGGTCATTGGTTGTAAATGGATGTTTTCTGTTAAGGTGAATTCTGATGGAACAATGGCTCAATTGAAAGCTCGTCTTATTGCCAAAGGTTAG ATGGATTCGGTACCAAGTGATGATCTTCCCATTGTTGTTCGCAAAGGTAAACACAAGTGTACTTACCCTGTTTCTTCTTTTATATTTTATCACCAATTGTCTCCTCCCACTTATGCTTTTATTACAACTCTGGACTCCACATCTATTCCTAACACTGTTCATGAACCTTTATCTCATCCTCGCTGGCAAAATGCAATGATTGAGGAGATGACTACTTTTGATGATAATGGTACTTGGGATTTAGTATCTCGTCCTGCAGGAAAGAAGGTCATTGGTTGTAAATGGATGTTTTCTGTTAAGGTGAATTCTGATGGAACAATGGCTCAATTGAAAGCTCGTCTTATTGCCAAAGGTTAG ATGGATTCGGTACCAAGTGATGATCTTCCCATTGTTGTTCGCAAAGGTAAACACAAGTGTACTTACCCTGTTTCTTCTTTTATATTTTATCACCAATTGTCTCCTCCCACTTATGCTTTTATTACAACTCTGGACTCCACATCTATTCCTAACACTGTTCATGAACCTTTATCTCATCCTCGCTGGCAAAATGCAATGATTGAGGAGATGACTACTTTTGATGATAATGGTACTTGGGATTTAGTATCTCGTCCTGCAGGAAAGAAGGTCATTGGTTGTAAATGGATGTTTTCTGTTAAGGTGAATTCTGATGGAACAATGGCTCAATTGAAAGCTCGTCTTATTGCCAAAGGTTAG MDSVPSDDLPIVVRKGKHKCTYPVSSFIFYHQLSPPTYAFITTLDSTSIPNTVHEPLSHPRWQNAMIEEMTTFDDNGTWDLVSRPAGKKVIGCKWMFSVKVNSDGTMAQLKARLIAKG Homology
BLAST of Cmc08g0227931 vs. NCBI nr
Match: KAA0041294.1 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa] >TYK02754.1 Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [Cucumis melo var. makuwa]) HSP 1 Score: 241.5 bits (615), Expect = 3.7e-60 Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of Cmc08g0227931 vs. NCBI nr
Match: XP_031744754.1 (uncharacterized protein LOC101212255 isoform X2 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 5.9e-50 Identity = 95/117 (81.20%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Cmc08g0227931 vs. NCBI nr
Match: XP_031744758.1 (uncharacterized protein LOC101212255 isoform X5 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 5.9e-50 Identity = 95/117 (81.20%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Cmc08g0227931 vs. NCBI nr
Match: XP_031744753.1 (uncharacterized protein LOC101212255 isoform X1 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 5.9e-50 Identity = 95/117 (81.20%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Cmc08g0227931 vs. NCBI nr
Match: XP_031744755.1 (uncharacterized protein LOC101212255 isoform X3 [Cucumis sativus]) HSP 1 Score: 207.6 bits (527), Expect = 5.9e-50 Identity = 95/117 (81.20%), Postives = 105/117 (89.74%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 9.2e-14 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 3.5e-13 Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12 Identity = 34/82 (41.46%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 6.1e-10 Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-07 Identity = 22/57 (38.60%), Postives = 33/57 (57.89%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy TrEMBL
Match: A0A5D3BUA0 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold145G00080 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 1.8e-60 Identity = 114/118 (96.61%), Postives = 116/118 (98.31%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy TrEMBL
Match: A0A5A7UAV0 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold673G001760 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.8e-47 Identity = 92/116 (79.31%), Postives = 100/116 (86.21%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy TrEMBL
Match: A0A5D3C8E2 (Putative Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1737G00160 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.8e-47 Identity = 92/116 (79.31%), Postives = 100/116 (86.21%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy TrEMBL
Match: A0A5D3DJ35 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G002840 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.6e-45 Identity = 90/117 (76.92%), Postives = 98/117 (83.76%), Query Frame = 0
BLAST of Cmc08g0227931 vs. ExPASy TrEMBL
Match: A0A5A7T376 (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00140 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.0e-40 Identity = 82/112 (73.21%), Postives = 93/112 (83.04%), Query Frame = 0
BLAST of Cmc08g0227931 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 ) HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16 Identity = 36/97 (37.11%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of Cmc08g0227931 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) ) HSP 1 Score: 77.8 bits (190), Expect = 6.5e-15 Identity = 36/83 (43.37%), Postives = 48/83 (57.83%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|