Cmc08g0227601 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0227601
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 20793756 .. 20795572 (-)
RNA-Seq Expression	Cmc08g0227601
Synteny	Cmc08g0227601

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGTCTATGCATTGACTTCTCTGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACGGTGTTCTCTAAGATTGATCTTCAGTCGGGATACCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCAACTGTACCTGATGGTTCTGGTAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGTTTGGGTTGTGTTTTGATGCAACAGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCTTTGAAAATATAGAGGCATTACTTATATGGTGAAAAGATACAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCGAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCATAGGATCATTGATGCTCAGGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGAAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGAACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTAAGGCTCACAGTTCCCCGTTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCCGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCACACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGATATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

mRNA sequence

ATGCGTCTATGCATTGACTTCTCTGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACGGTGTTCTCTAAGATTGATCTTCAGTCGGGATACCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCAACTGTACCTGATGGTTCTGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCGAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCATAGGATCATTGATGCTCAGGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGAAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGAACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTAAGGCTCACAGTTCCCCGTTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCCGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCACACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGATATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

Coding sequence (CDS)

ATGCGTCTATGCATTGACTTCTCTGAGTTGAATAAGGTAACCGTAAAGAACAGATATCCCTTGCCCAGGATCGACGATCTATTTGACCAGTTACAGGGAGCCACGGTGTTCTCTAAGATTGATCTTCAGTCGGGATACCATCAGTTGAGGATTAAGGATGGTGATGTACCGAAGACAGCATTTCGTTCCAGATATGGACACTACGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGGCAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGATACTTTTGTGATCGTGTTTATTGATGATATCTTGATATACTCCAAGACGGAGGCCGAACATGAGGAGCATTTACGTATAGTTTTGCAAACACTTCGGGATAATAAGTTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCACGTGGTTTCTAAGGCTGGAGTCTCTGTGGATCCAGCTAAGATAGAGGCAGTCACCGGTTGGACCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCTCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAACCTTAAACAGAAGCTAGTTACCGCACCGGTTCAACTGTACCTGATGGTTCTGGGTAAGGTGGTCGCTTATGCTTCTCGTCAGTTGAAGAGTCATGAGCAGAACTACCCTACACATGATTTAGAGTTGGCAGCAGTGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCCAGGCGAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGGGATCTCGAGCGGGCTGAGATTGCAGTGTCAGTGGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAGCCGACTTTGAGGCATAGGATCATTGATGCTCAGGGTAACGATCCTTATTTGGTTGAGAAACGTGGCCTAGCAGAGGCAGGGAAAGCGGTTGAGTTCTCCATATCCTCTGATGGTGAACTTTTGTTTGAGAGACGCCTCTGTGTGCCGTCAGATAGTGCGGTTAAGACAGAATTATTATCTAAGGCTCACAGTTCCCCGTTTTCCATGCACCCAGGTAGTACGAAGATGTATCAGGACCTGAAGCGGGTTTATTGGTGGCGTAACATGAAGAGGGAGGTAGCAGAATTTGTTAGTAGATGCTTGGTGTGTCAGCAGGTTAAGGCACCAAGGCAGAAACCAGCCGGTTTATTACAACCCTTGAGCATACCGGAATGGAAGTGGGAAAACGTGTCCATGGATTTCATTACAGGACTGCCGAGAACTCTGAGGGGTTTTACAGTGATTTGGGTTGTGGTGGACAGACTTACCAAATCAGCACACTTCGTTCCGGGTAAATCCACCTATACTGCTAGTAAGTGGGCACAGCTGTACATGTCTGAGATAGTGATATTACATGGAGTGCCAGTGTCGATTGTTTCTGATAGAGATGCCCGTTTCACTTCCAAATTCTAG

Protein sequence

MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVQLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAVIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLVEKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDARFTSKF

Homology

[Close]

BLAST of Cmc08g0227601 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 546/605 (90.25%), Postives = 555/605 (91.74%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPKTA
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV   
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                 LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                      IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQ NDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAG+AVEFS+SSDG LLFERRLCVPSDS VKTELLS+AHSSPFSMHPGSTKMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
            D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

Query: 541  PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
            PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LHGVPVSIVSDRDAR
Sbjct: 1162 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1221

[Close]

BLAST of Cmc08g0227601 vs. NCBI nr
Match: KAA0062112.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 546/605 (90.25%), Postives = 554/605 (91.57%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPKTA
Sbjct: 698  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 757

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE H
Sbjct: 758  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENH 817

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 818  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSE 877

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV   
Sbjct: 878  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 937

Query: 241  ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                 LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 938  PDGSGSFVIYSDTSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 997

Query: 301  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                      IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 998  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1057

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQ NDPYLV
Sbjct: 1058 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1117

Query: 421  EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAG+AVEFS+SSDG LLFERRLCVPSDSAVKTELLS+AHSSPFSMHPGSTKMYQ
Sbjct: 1118 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1177

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
            DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1178 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1237

Query: 541  PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
            PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT+SKWAQLYMSEIV LHGVPVSIVSDRDAR
Sbjct: 1238 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDAR 1297

[Close]

BLAST of Cmc08g0227601 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1073.5 bits (2775), Expect = 4.4e-310
Identity = 545/605 (90.08%), Postives = 553/605 (91.40%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPKTA
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPV   
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                 LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                      IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQ NDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAG+  EFS+SSDG LLFERRLCVPSDSAVKTELLS+AHSSPFSMHPGSTKMYQ
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1355

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
            DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1356 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1415

Query: 541  PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
            PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LHGVPVSIVSDRDAR
Sbjct: 1416 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1475

[Close]

BLAST of Cmc08g0227601 vs. NCBI nr
Match: KAA0026271.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1072.8 bits (2773), Expect = 8.7e-310
Identity = 545/605 (90.08%), Postives = 553/605 (91.40%), Query Frame = 0


Query: 1   MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
           MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPKTA
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
           VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV   
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 490

Query: 301 ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                     IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 491 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 550

Query: 361 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
           RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQGNDPYLV
Sbjct: 551 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLV 610

Query: 421 EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
           EKR LAEAG+AVEFS+SSDG LLFER LCVPSDSA KTELLS+AHSSPFSMHPGSTKMYQ
Sbjct: 611 EKRSLAEAGQAVEFSLSSDGGLLFERCLCVPSDSAAKTELLSEAHSSPFSMHPGSTKMYQ 670

Query: 481 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
           DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGL
Sbjct: 671 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPVGLLQPLSIPEWKWENVSMDFITGL 730

Query: 541 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
           PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LH VPVSIVSD+DAR
Sbjct: 731 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHEVPVSIVSDKDAR 790

[Close]

BLAST of Cmc08g0227601 vs. NCBI nr
Match: KAA0056702.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1069.3 bits (2764), Expect = 1.1e-308
Identity = 544/605 (89.92%), Postives = 552/605 (91.24%), Query Frame = 0


Query: 1   MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
           MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPKTA
Sbjct: 136 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 195

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 196 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 255

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LR+VLQTLRDNKLYA+FSK EFWLKQVSFLGHVVSKAGVSVDPAKIEAV GWTRPSTVSE
Sbjct: 256 LRMVLQTLRDNKLYARFSKYEFWLKQVSFLGHVVSKAGVSVDPAKIEAVIGWTRPSTVSE 315

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
           VRSFLGL GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV   
Sbjct: 316 VRSFLGLVGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVITV 375

Query: 241 ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 376 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 435

Query: 301 ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                     IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 436 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 495

Query: 361 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
           RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQ NDPYLV
Sbjct: 496 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 555

Query: 421 EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
           EKRGLAEAG+AVEFS+SSDG LLFER LCVPSDSAVKTELLS+AHSSPFSMHPGSTKMYQ
Sbjct: 556 EKRGLAEAGQAVEFSLSSDGGLLFERCLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 615

Query: 481 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
           DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 616 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 675

Query: 541 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
           PRTLRGFTVIW VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LHGVPVSIVSDRDAR
Sbjct: 676 PRTLRGFTVIWAVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 735

[Close]

BLAST of Cmc08g0227601 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.7e-89
Identity = 195/615 (31.71%), Postives = 322/615 (52.36%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            +R+ +D+  LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVQLY 240
            +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PV  +
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  L--------------MVLGKV------------VAYASRQLKSHEQNYPTHDLELAAV-- 300
                           + +G V            V Y S ++   + NY   D E+ A+  
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  -----------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGE 360
                             I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIID 420
            AN +ADALSR       ++    P+ +D E   I          + Q+++    +++++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQGNDPYLVEKRGLAEAGKAVEFSIS-SDGELLFER-RLCVPSDSAVKTELLSKAHSSPF 480
               ND  L+    L    K VE +I   DG L+  + ++ +P+D+ +   ++ K H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGV 567
            E++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1058

[Close]

BLAST of Cmc08g0227601 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.7e-89
Identity = 195/615 (31.71%), Postives = 322/615 (52.36%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            +R+ +D+  LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVQLY 240
            +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PV  +
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  L--------------MVLGKV------------VAYASRQLKSHEQNYPTHDLELAAV-- 300
                           + +G V            V Y S ++   + NY   D E+ A+  
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  -----------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGE 360
                             I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIID 420
            AN +ADALSR       ++    P+ +D E   I          + Q+++    +++++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQGNDPYLVEKRGLAEAGKAVEFSIS-SDGELLFER-RLCVPSDSAVKTELLSKAHSSPF 480
               ND  L+    L    K VE +I   DG L+  + ++ +P+D+ +   ++ K H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGV 567
            E++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1058

[Close]

BLAST of Cmc08g0227601 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.7e-89
Identity = 195/615 (31.71%), Postives = 322/615 (52.36%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            +R+ +D+  LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVQLY 240
            +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PV  +
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  L--------------MVLGKV------------VAYASRQLKSHEQNYPTHDLELAAV-- 300
                           + +G V            V Y S ++   + NY   D E+ A+  
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  -----------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGE 360
                             I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIID 420
            AN +ADALSR       ++    P+ +D E   I          + Q+++    +++++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQGNDPYLVEKRGLAEAGKAVEFSIS-SDGELLFER-RLCVPSDSAVKTELLSKAHSSPF 480
               ND  L+    L    K VE +I   DG L+  + ++ +P+D+ +   ++ K H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGV 567
            E++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1058

[Close]

BLAST of Cmc08g0227601 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.7e-89
Identity = 195/615 (31.71%), Postives = 322/615 (52.36%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            +R+ +D+  LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVQLY 240
            +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PV  +
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  L--------------MVLGKV------------VAYASRQLKSHEQNYPTHDLELAAV-- 300
                           + +G V            V Y S ++   + NY   D E+ A+  
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  -----------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGE 360
                             I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIID 420
            AN +ADALSR       ++    P+ +D E   I          + Q+++    +++++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQGNDPYLVEKRGLAEAGKAVEFSIS-SDGELLFER-RLCVPSDSAVKTELLSKAHSSPF 480
               ND  L+    L    K VE +I   DG L+  + ++ +P+D+ +   ++ K H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGV 567
            E++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1058

[Close]

BLAST of Cmc08g0227601 vs. ExPASy Swiss-Prot
Match: P0CT37 (Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-4 PE=3 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.7e-89
Identity = 195/615 (31.71%), Postives = 322/615 (52.36%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            +R+ +D+  LNK    N YPLP I+ L  ++QG+T+F+K+DL+S YH +R++ GD  K A
Sbjct: 462  LRMVVDYKPLNKYVKPNIYPLPLIEQLLAKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLA 521

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FR   G +E++VM +G++ APA F   +N +  E  ++ V+ ++DDILI+SK+E+EH +H
Sbjct: 522  FRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVCYMDDILIHSKSESEHVKH 581

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            ++ VLQ L++  L    +KCEF   QV F+G+ +S+ G +     I+ V  W +P    E
Sbjct: 582  VKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKE 641

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVQLY 240
            +R FLG   Y R+F+   S++  PL  L +K   + W+     + +N+KQ LV+ PV  +
Sbjct: 642  LRQFLGSVNYLRKFIPKTSQLTHPLNNLLKKDVRWKWTPTQTQAIENIKQCLVSPPVLRH 701

Query: 241  L--------------MVLGKV------------VAYASRQLKSHEQNYPTHDLELAAV-- 300
                           + +G V            V Y S ++   + NY   D E+ A+  
Sbjct: 702  FDFSKKILLETDASDVAVGAVLSQKHDDDKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIK 761

Query: 301  -----------------IFTDHKSLKYFFTQKE--LNMRQRRWLELVKDYDCEILYHPGE 360
                             I TDH++L    T +    N R  RW   ++D++ EI Y PG 
Sbjct: 762  SLKHWRHYLESTIEPFKILTDHRNLIGRITNESEPENKRLARWQLFLQDFNFEINYRPGS 821

Query: 361  ANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIID 420
            AN +ADALSR       ++    P+ +D E   I          + Q+++    +++++ 
Sbjct: 822  ANHIADALSR-------IVDETEPIPKDSEDNSINF--------VNQISITDDFKNQVVT 881

Query: 421  AQGNDPYLVEKRGLAEAGKAVEFSIS-SDGELLFER-RLCVPSDSAVKTELLSKAHSSPF 480
               ND  L+    L    K VE +I   DG L+  + ++ +P+D+ +   ++ K H    
Sbjct: 882  EYTNDTKLLNL--LNNEDKRVEENIQLKDGLLINSKDQILLPNDTQLTRTIIKKYHEEGK 941

Query: 481  SMHPGSTKMYQDLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKW 540
             +HPG   +   + R + W+ +++++ E+V  C  CQ  K+   KP G LQP+   E  W
Sbjct: 942  LIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPW 1001

Query: 541  ENVSMDFITGLPRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGV 567
            E++SMDFIT LP +  G+  ++VVVDR +K A  VP   + TA + A+++   ++   G 
Sbjct: 1002 ESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGN 1058

[Close]

BLAST of Cmc08g0227601 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1075.8 bits (2781), Expect = 0.0e+00
Identity = 546/605 (90.25%), Postives = 555/605 (91.74%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPKTA
Sbjct: 622  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 681

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 682  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 741

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 742  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 801

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV   
Sbjct: 802  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 861

Query: 241  ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                 LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 862  PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 921

Query: 301  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                      IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 922  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 981

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQ NDPYLV
Sbjct: 982  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1041

Query: 421  EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAG+AVEFS+SSDG LLFERRLCVPSDS VKTELLS+AHSSPFSMHPGSTKMY+
Sbjct: 1042 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSVVKTELLSEAHSSPFSMHPGSTKMYR 1101

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
            D+KRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1102 DVKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1161

Query: 541  PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
            PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LHGVPVSIVSDRDAR
Sbjct: 1162 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1221

[Close]

BLAST of Cmc08g0227601 vs. ExPASy TrEMBL
Match: A0A5A7V1N3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G004680 PE=4 SV=1)

HSP 1 Score: 1075.5 bits (2780), Expect = 0.0e+00
Identity = 546/605 (90.25%), Postives = 554/605 (91.57%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPKTA
Sbjct: 698  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 757

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHE H
Sbjct: 758  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHENH 817

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSK GVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 818  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKTGVSVDPAKIEAVTGWTRPSTVSE 877

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV   
Sbjct: 878  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 937

Query: 241  ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                 LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 938  PDGSGSFVIYSDTSKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 997

Query: 301  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                      IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 998  RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1057

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQ NDPYLV
Sbjct: 1058 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1117

Query: 421  EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAG+AVEFS+SSDG LLFERRLCVPSDSAVKTELLS+AHSSPFSMHPGSTKMYQ
Sbjct: 1118 EKRGLAEAGQAVEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1177

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
            DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1178 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1237

Query: 541  PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
            PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYT+SKWAQLYMSEIV LHGVPVSIVSDRDAR
Sbjct: 1238 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTSSKWAQLYMSEIVRLHGVPVSIVSDRDAR 1297

[Close]

BLAST of Cmc08g0227601 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1073.5 bits (2775), Expect = 2.1e-310
Identity = 545/605 (90.08%), Postives = 553/605 (91.40%), Query Frame = 0


Query: 1    MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
            MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKD DVPKTA
Sbjct: 876  MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTA 935

Query: 61   FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
            FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 936  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 995

Query: 121  LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
            LR+VLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 996  LRMVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 1055

Query: 181  VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
            VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQ LKQKLVTAPV   
Sbjct: 1056 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTV 1115

Query: 241  ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                 LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 1116 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 1175

Query: 301  ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                      IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 1176 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 1235

Query: 361  RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
            RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQ NDPYLV
Sbjct: 1236 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 1295

Query: 421  EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
            EKRGLAEAG+  EFS+SSDG LLFERRLCVPSDSAVKTELLS+AHSSPFSMHPGSTKMYQ
Sbjct: 1296 EKRGLAEAGQTAEFSLSSDGGLLFERRLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 1355

Query: 481  DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
            DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 1356 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 1415

Query: 541  PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
            PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LHGVPVSIVSDRDAR
Sbjct: 1416 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 1475

[Close]

BLAST of Cmc08g0227601 vs. ExPASy TrEMBL
Match: A0A5A7SPZ2 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 4.2e-310
Identity = 545/605 (90.08%), Postives = 553/605 (91.40%), Query Frame = 0


Query: 1   MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
           MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPKTA
Sbjct: 191 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 250

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 251 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 310

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE
Sbjct: 311 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 370

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
           VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV   
Sbjct: 371 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTV 430

Query: 241 ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 431 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 490

Query: 301 ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                     IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 491 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 550

Query: 361 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
           RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQGNDPYLV
Sbjct: 551 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQGNDPYLV 610

Query: 421 EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
           EKR LAEAG+AVEFS+SSDG LLFER LCVPSDSA KTELLS+AHSSPFSMHPGSTKMYQ
Sbjct: 611 EKRSLAEAGQAVEFSLSSDGGLLFERCLCVPSDSAAKTELLSEAHSSPFSMHPGSTKMYQ 670

Query: 481 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
           DLKRVYWWRNMKREVAEFVS+CLVCQQVKAPRQKP GLLQPLSIPEWKWENVSMDFITGL
Sbjct: 671 DLKRVYWWRNMKREVAEFVSKCLVCQQVKAPRQKPVGLLQPLSIPEWKWENVSMDFITGL 730

Query: 541 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
           PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LH VPVSIVSD+DAR
Sbjct: 731 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHEVPVSIVSDKDAR 790

[Close]

BLAST of Cmc08g0227601 vs. ExPASy TrEMBL
Match: A0A5A7ULI8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00300 PE=4 SV=1)

HSP 1 Score: 1069.3 bits (2764), Expect = 5.5e-309
Identity = 544/605 (89.92%), Postives = 552/605 (91.24%), Query Frame = 0


Query: 1   MRLCIDFSELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLQSGYHQLRIKDGDVPKTA 60
           MRLCID+ ELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDL+SGYHQLRIKDGDVPKTA
Sbjct: 136 MRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTA 195

Query: 61  FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 120
           FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH
Sbjct: 196 FRSRYGHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEH 255

Query: 121 LRIVLQTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSE 180
           LR+VLQTLRDNKLYA+FSK EFWLKQVSFLGHVVSKAGVSVDPAKIEAV GWTRPSTVSE
Sbjct: 256 LRMVLQTLRDNKLYARFSKYEFWLKQVSFLGHVVSKAGVSVDPAKIEAVIGWTRPSTVSE 315

Query: 181 VRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV--- 240
           VRSFLGL GYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV   
Sbjct: 316 VRSFLGLVGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVITV 375

Query: 241 ------------------QLYLMVLGKVVAYASRQLKSHEQNYPTHDLELAAV------- 300
                                LM  GKVVAYASRQLKSHEQNYPTHDLELAAV       
Sbjct: 376 PDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIW 435

Query: 301 ----------IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGEANVVADALS 360
                     IFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPG+ANVVADALS
Sbjct: 436 RHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALS 495

Query: 361 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRHRIIDAQGNDPYLV 420
           RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLR RIIDAQ NDPYLV
Sbjct: 496 RKVSHSAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDAQSNDPYLV 555

Query: 421 EKRGLAEAGKAVEFSISSDGELLFERRLCVPSDSAVKTELLSKAHSSPFSMHPGSTKMYQ 480
           EKRGLAEAG+AVEFS+SSDG LLFER LCVPSDSAVKTELLS+AHSSPFSMHPGSTKMYQ
Sbjct: 556 EKRGLAEAGQAVEFSLSSDGGLLFERCLCVPSDSAVKTELLSEAHSSPFSMHPGSTKMYQ 615

Query: 481 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 540
           DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL
Sbjct: 616 DLKRVYWWRNMKREVAEFVSRCLVCQQVKAPRQKPAGLLQPLSIPEWKWENVSMDFITGL 675

Query: 541 PRTLRGFTVIWVVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVILHGVPVSIVSDRDAR 568
           PRTLRGFTVIW VVDRLTKSAHFVPGKSTYTASKWAQLYMSEIV LHGVPVSIVSDRDAR
Sbjct: 676 PRTLRGFTVIWAVVDRLTKSAHFVPGKSTYTASKWAQLYMSEIVRLHGVPVSIVSDRDAR 735

[Close]

BLAST of Cmc08g0227601 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 8.8e-25
Identity = 54/120 (45.00%), Postives = 77/120 (64.17%), Query Frame = 0


Query: 120 HLRIVLQTLRDNKLYAKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTGWTRPST 179
           HL +VLQ    ++ YA   KC F   Q+++LG  H++S  GVS DPAK+EA+ GW  P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 180 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPV 238
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 121

The following BLAST results are available for this feature:

BLAST of Cmc08g0227601 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	0.0e+00	90.25	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062112.1	0.0e+00	90.25	pol protein [Cucumis melo var. makuwa]	[more]
TYK01613.1	4.4e-310	90.08	pol protein [Cucumis melo var. makuwa]	[more]
KAA0026271.1	8.7e-310	90.08	pol protein [Cucumis melo var. makuwa]	[more]
KAA0056702.1	1.1e-308	89.92	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0227601 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CT41	1.7e-89	31.71	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	1.7e-89	31.71	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	1.7e-89	31.71	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	1.7e-89	31.71	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT37	1.7e-89	31.71	Transposon Tf2-4 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0227601 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U330	0.0e+00	90.25	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7V1N3	0.0e+00	90.25	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89...	[more]
A0A5D3BPI1	2.1e-310	90.08	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7SPZ2	4.2e-310	90.08	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G002730 PE...	[more]
A0A5A7ULI8	5.5e-309	89.92	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold73G00300 PE=...	[more]

BLAST of Cmc08g0227601 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.8e-25	45.00	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 19..154 e-value: 1.4E-66 score: 225.8
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 164..255 e-value: 1.0E-28 score: 101.2
None	No IPR available	GENE3D	1.10.340.70		coord: 381..471 e-value: 3.0E-18 score: 67.9
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 1..79 e-value: 1.4E-66 score: 225.8
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 2..237
None	No IPR available	PANTHER	PTHR34072:SF9	ENZYMATIC POLYPROTEIN-RELATED	coord: 262..566 coord: 2..237
None	No IPR available	PANTHER	PTHR34072	ENZYMATIC POLYPROTEIN-RELATED	coord: 262..566
None	No IPR available	CDD	cd01647	RT_LTR	coord: 2..154 e-value: 3.6373E-79 score: 244.812
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 245..325 e-value: 4.69776E-35 score: 126.068
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 5..153 e-value: 2.4E-24 score: 86.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 1..154 score: 11.212503
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 272..303 e-value: 1.5E-5 score: 25.2
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 481..567 e-value: 3.7E-15 score: 57.7
IPR041588	Integrase zinc-binding domain	PFAM	PF17921	Integrase_H2C2	coord: 416..472 e-value: 5.1E-17 score: 61.7
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 483..567 score: 9.419276
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..309
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 484..566

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0227601.1	Cmc08g0227601.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding