Cmc08g0227531 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0227531
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 20676456 .. 20678039 (-)
RNA-Seq Expression	Cmc08g0227531
Synteny	Cmc08g0227531

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTTGACGTATCCCTGTCATTGGAACCAGTGGTAAGGGACTACTCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAAAGAGATCGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAAAGCCCCAAACAGAATGGCCCCAGCAAAGTTGAAAGAACTGAAAGTGCAGTTGCAGGAATTGCTTCATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAATTTTATTTGTTAAGAAGAAAGATGGATCGATGCGCCTATGCATTAACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTATTCTCTAAGATTAATCTTCGGTCGGGATATCATCAGTTGAGAATTAAGGATGGTGATGTACCGAAGACAGCTTTTCGTTCTAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGACAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTAATGATATCTTGATATATTCCAAGATGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTACAAACCCTTCAGGATAATAAATTGTATACAAAGTTCTCAAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGGTTAATATCGACGATTTGTGGAGAACTTTTCCCGTATAGCCACTCCTCTTACTCAGTTGACCAGGAAGGGAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAAACTTAAACAGAAGCTAGTTACTGCACCGATTCTTACCATACCTGATGGTTTCGGCAGTTTTGTGATTTACAGTAATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTTGTCAGTTGAAGAGTCATGAGCAAAATTACCCTGCACACGATTTAGAGTTGGCAGCAGTGGTTTTTGTATTGAAGGTATGGAGGCATTACTTGTATGGTGAAAAGATAAAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTATGATTATGAGATATTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAAGGCTGAGATTTTAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAACCGACTTTGAGGCAAAGGATCATTGATGCTTAG

mRNA sequence

ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTTGACGTATCCCTGTCATTGGAACCAGTGGTAAGGGACTACTCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAAAGAGATCGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAAAGCCCCAAACAGAATGGCCCCAGCAAAGTTGAAAGAACTGAAAGTGCAGTTGCAGGAATTGCTTCATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAATTTTATTTGTTAAGAAGAAAGATGGATCGATGCGCCTATGCATTAACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTATTCTCTAAGATTAATCTTCGGTCGGGATATCATCAGTTGAGAATTAAGGATGGTGATGTACCGAAGACAGCTTTTCGTTCTAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGACAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTAATGATATCTTGATATATTCCAAGATGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTACAAACCCTTCAGGATAATAAATTGTATACAAAGTTCTCAAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAAACTTAAACAGAAGCTAGTTACTGCACCGATTCTTACCATACCTGATGGTTTCGGCAGTTTTGTGATTTACAGTAATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTTGTCAGTTGAAGAGTCATGAGCAAAATTACCCTGCACACGATTTAGAGTTGGCAGCAGTGGTTTTTGTATTGAAGGTATGGAGGCATTACTTGTATGGTGAAAAGATAAAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTATGATTATGAGATATTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAAGGCTGAGATTTTAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAACCGACTTTGAGGCAAAGGATCATTGATGCTTAG

Coding sequence (CDS)

ATGAGGGCCAGCAAACTGCTCAGTCAGGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTTGACGTATCCCTGTCATTGGAACCAGTGGTAAGGGACTACTCGGATGTCTTTCCTGAAGAACTTCCAGGGTTACCTCCTCACAAAGAGATCGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATCCAAAGCCCCAAACAGAATGGCCCCAGCAAAGTTGAAAGAACTGAAAGTGCAGTTGCAGGAATTGCTTCATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAATTTTATTTGTTAAGAAGAAAGATGGATCGATGCGCCTATGCATTAACTATAGGGAGTTGAATAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGATCTGTTTGACCAGTTACAGGGAGCTACAGTATTCTCTAAGATTAATCTTCGGTCGGGATATCATCAGTTGAGAATTAAGGATGGTGATGTACCGAAGACAGCTTTTCGTTCTAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGTTTGACGAATGCTCCGACAGTGTTTATGGACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGACACTTTTGTGATCGTGTTTATTAATGATATCTTGATATATTCCAAGATGGAGGCCGAGCATGAGGAGCATTTACGTATGGTTCTACAAACCCTTCAGGATAATAAATTGTATACAAAGTTCTCAAAATGCGAGTTTTGGCTGAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTCTAAGGCTGGAGTTTCTGTAGATCCAGCTAAGATAGAGGCAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGCTTTCTGGGTTTAGCAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAAACTTAAACAGAAGCTAGTTACTGCACCGATTCTTACCATACCTGATGGTTTCGGCAGTTTTGTGATTTACAGTAATGCTTCTAAGAAGGGTTTGGGTTGTGTATTGATGCAGCAAGGTAAGGTAGTCGCTTATGCTTCTTGTCAGTTGAAGAGTCATGAGCAAAATTACCCTGCACACGATTTAGAGTTGGCAGCAGTGGTTTTTGTATTGAAGGTATGGAGGCATTACTTGTATGGTGAAAAGATAAAGATCTTCACGGATCATAAGAGCTTGAAATACTTCTTTACTCAGAAGGAATTGAATATGAGACAGCGAAGATGGCTTGAGTTAGTGAAGGATTATGATTATGAGATATTGTATCATCCAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATTTTGAGAAGGCTGAGATTTTAGTGTCAGTAGGGGCAGTCACTATGCAGTTAGCCCAGTTGACGGTACAACCGACTTTGAGGCAAAGGATCATTGATGCTTAG

Protein sequence

MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIELEPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVLQTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAAPFVWSKACEDSFQKLKQKLVTAPILTIPDGFGSFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLYGEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA

Homology

[Close]

BLAST of Cmc08g0227531 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 922.9 bits (2384), Expect = 1.2e-264
Identity = 467/527 (88.61%), Postives = 483/527 (91.65%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
            +RASKLLSQGTW ILASVVDTRE DVSLS EPVVRDY DVFPEELPGLPPH+E+EFAIEL
Sbjct: 507  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 566

Query: 61   EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
            EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 567  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 626

Query: 121  NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
            +YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI+LRSGYHQLRIKD DVPKTAFRSRY
Sbjct: 627  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 686

Query: 181  GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI+DILIYSK EAEHEEHLRMVL
Sbjct: 687  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 746

Query: 241  QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            QTL+DNKLY KFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 747  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 806

Query: 301  GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
            GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG G
Sbjct: 807  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG 866

Query: 361  SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
            SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 867  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 926

Query: 421  GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
            GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 927  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 986

Query: 481  SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
            SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 987  SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 1033

[Close]

BLAST of Cmc08g0227531 vs. NCBI nr
Match: KAA0037244.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 922.9 bits (2384), Expect = 1.2e-264
Identity = 467/527 (88.61%), Postives = 483/527 (91.65%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
            +RASKLLSQGTW ILASVVDTREVDVSLSLEPVVRDY DVFPEELPGLPPH+E+EFAIEL
Sbjct: 541  IRASKLLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIEL 600

Query: 61   EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
            EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 601  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 660

Query: 121  NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
            +YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI+LRSGYHQLRIKD DVPKTAFRSRY
Sbjct: 661  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 720

Query: 181  GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI+DILIYSK E EHEEHLRMVL
Sbjct: 721  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVL 780

Query: 241  QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            QTL+DNKLY KF KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 781  QTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 840

Query: 301  GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
            GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG G
Sbjct: 841  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG 900

Query: 361  SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
            SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 901  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 960

Query: 421  GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
            GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 961  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 1020

Query: 481  SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
            SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 1021 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 1067

[Close]

BLAST of Cmc08g0227531 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 922.5 bits (2383), Expect = 1.5e-264
Identity = 467/527 (88.61%), Postives = 483/527 (91.65%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
            +RASKLLSQGTW ILASVVDTRE DVSLS EPVVRDY DVFPEELPGLPPH+E+EFAIEL
Sbjct: 761  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 820

Query: 61   EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
            EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 821  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 880

Query: 121  NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
            +YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI+LRSGYHQLRIKD DVPKTAFRSRY
Sbjct: 881  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 940

Query: 181  GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI+DILIYSK EAEHEEHLRMVL
Sbjct: 941  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 1000

Query: 241  QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            QTL+DNKLY KFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 1001 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 1060

Query: 301  GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
            GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG G
Sbjct: 1061 GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSG 1120

Query: 361  SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
            SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 1121 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 1180

Query: 421  GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
            GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 1181 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 1240

Query: 481  SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
            SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 1241 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 1287

[Close]

BLAST of Cmc08g0227531 vs. NCBI nr
Match: KAA0057672.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 919.5 bits (2375), Expect = 1.3e-263
Identity = 466/527 (88.43%), Postives = 482/527 (91.46%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
           +RASKLLSQGTW ILASVVDTRE DVSLS EPVVRDY DVFPEELPGLPPH+E+EFAIEL
Sbjct: 25  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 84

Query: 61  EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
           EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 85  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 144

Query: 121 NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
           +YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI+LRSG HQLRIKD DVPKTAFRSRY
Sbjct: 145 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRY 204

Query: 181 GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
           GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI+DILIYSK EAEHEEHLRMVL
Sbjct: 205 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 264

Query: 241 QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           QTL+DNKLY KFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 265 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 324

Query: 301 GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
           GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG G
Sbjct: 325 GLAGYYRRFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG 384

Query: 361 SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
           SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 385 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 444

Query: 421 GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
           GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 445 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 504

Query: 481 SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
           SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 505 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 551

[Close]

BLAST of Cmc08g0227531 vs. NCBI nr
Match: KAA0058464.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 918.7 bits (2373), Expect = 2.2e-263
Identity = 463/527 (87.86%), Postives = 484/527 (91.84%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
           +RASKLLSQGTW ILASVVDTREVDVSLS EPVVRDY +VFPEELPGLPPH+E+EFAIEL
Sbjct: 239 IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPNVFPEELPGLPPHREVEFAIEL 298

Query: 61  EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
           EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 299 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 358

Query: 121 NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
           +YRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKI+LRSGYHQLRIKDGDVPKTAFRSRY
Sbjct: 359 DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 418

Query: 181 GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
           GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVI+FI+DILIYSK EAEHEEHLR+VL
Sbjct: 419 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEEHLRIVL 478

Query: 241 QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           QTL+DNKLY KFSKCEFWLKQVSFLGHVVSK  VSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 479 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVRVSVDPAKIEAVTGWTRPSTVSEVRSFL 538

Query: 301 GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
           GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG+G
Sbjct: 539 GLAGYYQRFGENFSRIATPLTQLTRKGAPFVWSKACEDSFQDLKQKLVTAPVLTVPDGYG 598

Query: 361 SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
           SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 599 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 658

Query: 421 GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
           GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 659 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 718

Query: 481 SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
           SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 719 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 765

[Close]

BLAST of Cmc08g0227531 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 3.0e-74
Identity = 149/417 (35.73%), Postives = 236/417 (56.59%), Query Frame = 0


Query: 66  PISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKD-----GSMRLCI 125
           PI      +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 126 NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 185
           +YR+LN++T+ +RYP+P +D++  +L     F+ I+L  G+HQ+ + +  + KTAF ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 186 GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 245
           GHYE++ M FGL NAP  F   MN + R  L+   +V+++DI+I+S    EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 246 QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 305
             L D  L  +  KCEF  K+ +FLGH+V+  G+  +P K++A+ S+P P+   E+R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 306 GLAAPF-----------------------VWSKACE--DSFQKLKQKLVTAPILTIPDGF 365
           GL   +                       + ++  E  ++F+KLK  ++  PIL +PD  
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFE 505

Query: 366 GSFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYL 425
             FV+ ++AS   LG VL Q G  +++ S  L  HE NY A + EL A+V+  K +RHYL
Sbjct: 506 KKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYL 565

Query: 426 YGEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSR 453
            G +  I +DH+ L++    KE   +  RW   + +Y ++I Y  GK N VADALSR
Sbjct: 566 LGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc08g0227531 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.5e-73
Identity = 145/403 (35.98%), Postives = 232/403 (57.57%), Query Frame = 0


Query: 80  KELKVQLQELLHKGFIRPSVSPWGAPILFV-KKKDGS----MRLCINYRELNKVTVKNRY 139
           +E++ Q+Q++L++G IR S SP+ +PI  V KK+D S     R+ I+YR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 140 PLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTN 199
           P+P +D++  +L     F+ I+L  G+HQ+ +    V KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 200 APTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVLQTLQDNKLYTKFSK 259
           AP  F   MN + R  L+   +V+++DI+++S    EH + L +V + L    L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 260 CEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAAPF-------- 319
           CEF  ++ +FLGHV++  G+  +P KIEA+  +P P+   E+++FLGL   +        
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 320 -----------------VWSKACEDSFQKLKQKLVTAPILTIPDGFGSFVIYSNASKKGL 379
                              +   + +F+KLK  +   PIL +PD    F + ++AS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 380 GCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLYGEKIKIFTDHKSL 439
           G VL Q G  ++Y S  L  HE NY   + EL A+V+  K +RHYL G   +I +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 440 KYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSR 453
            + +  K+ N +  RW   + ++D++I Y  GK N VADALSR
Sbjct: 581 SWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc08g0227531 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.5e-70
Identity = 162/486 (33.33%), Postives = 262/486 (53.91%), Query Frame = 0


Query: 30  LEPVVRDYSDVF----PEELPGLPPHKEIEFAIEL--EPGTVPISKAPNRMAPAKLKELK 89
           L  + +++ D+      E+LP   P K +EF +EL  E   +PI   P  + P K++ + 
Sbjct: 374 LPDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYP--LPPGKMQAMN 433

Query: 90  VQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLF 149
            ++ + L  G IR S +    P++FV KK+G++R+ ++Y+ LNK    N YPLP I+ L 
Sbjct: 434 DEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLL 493

Query: 150 DQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLM 209
            ++QG+T+F+K++L+S YH +R++ GD  K AFR   G +E++VM +G++ AP  F   +
Sbjct: 494 AKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFI 553

Query: 210 NRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVLQTLQDNKLYTKFSKCEFWLKQVS 269
           N +  E  ++ V+ +++DILI+SK E+EH +H++ VLQ L++  L    +KCEF   QV 
Sbjct: 554 NTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVK 613

Query: 270 FLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLG--------------LAAP---- 329
           F+G+ +S+ G +     I+ V  W +P    E+R FLG              L  P    
Sbjct: 614 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNL 673

Query: 330 ------FVWSKACEDSFQKLKQKLVTAPILTIPDGFGSFVIYSNASKKGLGCVLMQQGK- 389
                 + W+     + + +KQ LV+ P+L   D     ++ ++AS   +G VL Q+   
Sbjct: 674 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 733

Query: 390 ----VVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLYG--EKIKIFTDHKSLKYF 449
                V Y S ++   + NY   D E+ A++  LK WRHYL    E  KI TDH++L   
Sbjct: 734 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 793

Query: 450 FTQKE--LNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD 477
            T +    N R  RW   ++D+++EI Y PG AN +ADALSR       ++    P+ +D
Sbjct: 794 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKD 848

[Close]

BLAST of Cmc08g0227531 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.5e-70
Identity = 162/486 (33.33%), Postives = 262/486 (53.91%), Query Frame = 0


Query: 30  LEPVVRDYSDVF----PEELPGLPPHKEIEFAIEL--EPGTVPISKAPNRMAPAKLKELK 89
           L  + +++ D+      E+LP   P K +EF +EL  E   +PI   P  + P K++ + 
Sbjct: 374 LPDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYP--LPPGKMQAMN 433

Query: 90  VQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLF 149
            ++ + L  G IR S +    P++FV KK+G++R+ ++Y+ LNK    N YPLP I+ L 
Sbjct: 434 DEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLL 493

Query: 150 DQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLM 209
            ++QG+T+F+K++L+S YH +R++ GD  K AFR   G +E++VM +G++ AP  F   +
Sbjct: 494 AKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFI 553

Query: 210 NRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVLQTLQDNKLYTKFSKCEFWLKQVS 269
           N +  E  ++ V+ +++DILI+SK E+EH +H++ VLQ L++  L    +KCEF   QV 
Sbjct: 554 NTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVK 613

Query: 270 FLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLG--------------LAAP---- 329
           F+G+ +S+ G +     I+ V  W +P    E+R FLG              L  P    
Sbjct: 614 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNL 673

Query: 330 ------FVWSKACEDSFQKLKQKLVTAPILTIPDGFGSFVIYSNASKKGLGCVLMQQGK- 389
                 + W+     + + +KQ LV+ P+L   D     ++ ++AS   +G VL Q+   
Sbjct: 674 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 733

Query: 390 ----VVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLYG--EKIKIFTDHKSLKYF 449
                V Y S ++   + NY   D E+ A++  LK WRHYL    E  KI TDH++L   
Sbjct: 734 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 793

Query: 450 FTQKE--LNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD 477
            T +    N R  RW   ++D+++EI Y PG AN +ADALSR       ++    P+ +D
Sbjct: 794 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKD 848

[Close]

BLAST of Cmc08g0227531 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 267.3 bits (682), Expect = 3.5e-70
Identity = 162/486 (33.33%), Postives = 262/486 (53.91%), Query Frame = 0


Query: 30  LEPVVRDYSDVF----PEELPGLPPHKEIEFAIEL--EPGTVPISKAPNRMAPAKLKELK 89
           L  + +++ D+      E+LP   P K +EF +EL  E   +PI   P  + P K++ + 
Sbjct: 374 LPDIYKEFKDITAETNTEKLP--KPIKGLEFEVELTQENYRLPIRNYP--LPPGKMQAMN 433

Query: 90  VQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCINYRELNKVTVKNRYPLPRIDDLF 149
            ++ + L  G IR S +    P++FV KK+G++R+ ++Y+ LNK    N YPLP I+ L 
Sbjct: 434 DEINQGLKSGIIRESKAINACPVMFVPKKEGTLRMVVDYKPLNKYVKPNIYPLPLIEQLL 493

Query: 150 DQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRYGHYEFIVMSFGLTNAPTVFMDLM 209
            ++QG+T+F+K++L+S YH +R++ GD  K AFR   G +E++VM +G++ AP  F   +
Sbjct: 494 AKIQGSTIFTKLDLKSAYHLIRVRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFI 553

Query: 210 NRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVLQTLQDNKLYTKFSKCEFWLKQVS 269
           N +  E  ++ V+ +++DILI+SK E+EH +H++ VLQ L++  L    +KCEF   QV 
Sbjct: 554 NTILGEAKESHVVCYMDDILIHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVK 613

Query: 270 FLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLG--------------LAAP---- 329
           F+G+ +S+ G +     I+ V  W +P    E+R FLG              L  P    
Sbjct: 614 FIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIPKTSQLTHPLNNL 673

Query: 330 ------FVWSKACEDSFQKLKQKLVTAPILTIPDGFGSFVIYSNASKKGLGCVLMQQGK- 389
                 + W+     + + +KQ LV+ P+L   D     ++ ++AS   +G VL Q+   
Sbjct: 674 LKKDVRWKWTPTQTQAIENIKQCLVSPPVLRHFDFSKKILLETDASDVAVGAVLSQKHDD 733

Query: 390 ----VVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLYG--EKIKIFTDHKSLKYF 449
                V Y S ++   + NY   D E+ A++  LK WRHYL    E  KI TDH++L   
Sbjct: 734 DKYYPVGYYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYLESTIEPFKILTDHRNLIGR 793

Query: 450 FTQKE--LNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSHSAALITRQAPLHRD 477
            T +    N R  RW   ++D+++EI Y PG AN +ADALSR       ++    P+ +D
Sbjct: 794 ITNESEPENKRLARWQLFLQDFNFEINYRPGSANHIADALSR-------IVDETEPIPKD 848

[Close]

BLAST of Cmc08g0227531 vs. ExPASy TrEMBL
Match: A0A5A7T190 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001700 PE=4 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 5.6e-265
Identity = 467/527 (88.61%), Postives = 483/527 (91.65%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
            +RASKLLSQGTW ILASVVDTREVDVSLSLEPVVRDY DVFPEELPGLPPH+E+EFAIEL
Sbjct: 541  IRASKLLSQGTWGILASVVDTREVDVSLSLEPVVRDYPDVFPEELPGLPPHREVEFAIEL 600

Query: 61   EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
            EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 601  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 660

Query: 121  NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
            +YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI+LRSGYHQLRIKD DVPKTAFRSRY
Sbjct: 661  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 720

Query: 181  GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI+DILIYSK E EHEEHLRMVL
Sbjct: 721  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEVEHEEHLRMVL 780

Query: 241  QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            QTL+DNKLY KF KCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 781  QTLRDNKLYAKFLKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 840

Query: 301  GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
            GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG G
Sbjct: 841  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG 900

Query: 361  SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
            SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 901  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 960

Query: 421  GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
            GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 961  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 1020

Query: 481  SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
            SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 1021 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 1067

[Close]

BLAST of Cmc08g0227531 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 922.9 bits (2384), Expect = 5.6e-265
Identity = 467/527 (88.61%), Postives = 483/527 (91.65%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
            +RASKLLSQGTW ILASVVDTRE DVSLS EPVVRDY DVFPEELPGLPPH+E+EFAIEL
Sbjct: 507  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 566

Query: 61   EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
            EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 567  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 626

Query: 121  NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
            +YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI+LRSGYHQLRIKD DVPKTAFRSRY
Sbjct: 627  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 686

Query: 181  GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI+DILIYSK EAEHEEHLRMVL
Sbjct: 687  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 746

Query: 241  QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            QTL+DNKLY KFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 747  QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 806

Query: 301  GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
            GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG G
Sbjct: 807  GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG 866

Query: 361  SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
            SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 867  SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 926

Query: 421  GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
            GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 927  GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 986

Query: 481  SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
            SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 987  SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 1033

[Close]

BLAST of Cmc08g0227531 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 922.5 bits (2383), Expect = 7.4e-265
Identity = 467/527 (88.61%), Postives = 483/527 (91.65%), Query Frame = 0


Query: 1    MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
            +RASKLLSQGTW ILASVVDTRE DVSLS EPVVRDY DVFPEELPGLPPH+E+EFAIEL
Sbjct: 761  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 820

Query: 61   EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
            EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 821  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 880

Query: 121  NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
            +YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI+LRSGYHQLRIKD DVPKTAFRSRY
Sbjct: 881  DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRY 940

Query: 181  GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
            GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI+DILIYSK EAEHEEHLRMVL
Sbjct: 941  GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 1000

Query: 241  QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
            QTL+DNKLY KFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 1001 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 1060

Query: 301  GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
            GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG G
Sbjct: 1061 GLAGYYRRFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSG 1120

Query: 361  SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
            SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 1121 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 1180

Query: 421  GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
            GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 1181 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 1240

Query: 481  SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
            SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 1241 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 1287

[Close]

BLAST of Cmc08g0227531 vs. ExPASy TrEMBL
Match: A0A5A7UP94 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE=4 SV=1)

HSP 1 Score: 919.5 bits (2375), Expect = 6.2e-264
Identity = 466/527 (88.43%), Postives = 482/527 (91.46%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
           +RASKLLSQGTW ILASVVDTRE DVSLS EPVVRDY DVFPEELPGLPPH+E+EFAIEL
Sbjct: 25  IRASKLLSQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIEL 84

Query: 61  EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
           EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 85  EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 144

Query: 121 NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
           +YRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKI+LRSG HQLRIKD DVPKTAFRSRY
Sbjct: 145 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGCHQLRIKDEDVPKTAFRSRY 204

Query: 181 GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
           GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVIVFI+DILIYSK EAEHEEHLRMVL
Sbjct: 205 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVL 264

Query: 241 QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           QTL+DNKLY KFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 265 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFL 324

Query: 301 GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
           GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG G
Sbjct: 325 GLAGYYRRFVENFSRTATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSG 384

Query: 361 SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
           SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 385 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 444

Query: 421 GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
           GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 445 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 504

Query: 481 SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
           SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 505 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 551

[Close]

BLAST of Cmc08g0227531 vs. ExPASy TrEMBL
Match: A0A5A7UTH9 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold132G00530 PE=4 SV=1)

HSP 1 Score: 918.7 bits (2373), Expect = 1.1e-263
Identity = 463/527 (87.86%), Postives = 484/527 (91.84%), Query Frame = 0


Query: 1   MRASKLLSQGTWSILASVVDTREVDVSLSLEPVVRDYSDVFPEELPGLPPHKEIEFAIEL 60
           +RASKLLSQGTW ILASVVDTREVDVSLS EPVVRDY +VFPEELPGLPPH+E+EFAIEL
Sbjct: 239 IRASKLLSQGTWGILASVVDTREVDVSLSSEPVVRDYPNVFPEELPGLPPHREVEFAIEL 298

Query: 61  EPGTVPISKAPNRMAPAKLKELKVQLQELLHKGFIRPSVSPWGAPILFVKKKDGSMRLCI 120
           EPGTVPIS+AP RMAPA+LKELKVQLQELL KGFIRPSVSPWGAP+LFVKKKDGSMRLCI
Sbjct: 299 EPGTVPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCI 358

Query: 121 NYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKINLRSGYHQLRIKDGDVPKTAFRSRY 180
           +YRELNKVTVKNRYPLP+IDDLFDQLQGATVFSKI+LRSGYHQLRIKDGDVPKTAFRSRY
Sbjct: 359 DYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVPKTAFRSRY 418

Query: 181 GHYEFIVMSFGLTNAPTVFMDLMNRVFREFLDTFVIVFINDILIYSKMEAEHEEHLRMVL 240
           GHYEFIVMSFGLTNAP VFMDLMNRVFREFLDTFVI+FI+DILIYSK EAEHEEHLR+VL
Sbjct: 419 GHYEFIVMSFGLTNAPAVFMDLMNRVFREFLDTFVIMFIDDILIYSKTEAEHEEHLRIVL 478

Query: 241 QTLQDNKLYTKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWPRPSTVSEVRSFL 300
           QTL+DNKLY KFSKCEFWLKQVSFLGHVVSK  VSVDPAKIEAVT W RPSTVSEVRSFL
Sbjct: 479 QTLRDNKLYAKFSKCEFWLKQVSFLGHVVSKVRVSVDPAKIEAVTGWTRPSTVSEVRSFL 538

Query: 301 GLA------------------------APFVWSKACEDSFQKLKQKLVTAPILTIPDGFG 360
           GLA                        APFVWSKACEDSFQ LKQKLVTAP+LT+PDG+G
Sbjct: 539 GLAGYYQRFGENFSRIATPLTQLTRKGAPFVWSKACEDSFQDLKQKLVTAPVLTVPDGYG 598

Query: 361 SFVIYSNASKKGLGCVLMQQGKVVAYASCQLKSHEQNYPAHDLELAAVVFVLKVWRHYLY 420
           SFVIYS+ASKKGLGCVLMQQGKVVAYAS QLKSHEQNYP HDLELAAVVF LK+WRHYLY
Sbjct: 599 SFVIYSDASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLY 658

Query: 421 GEKIKIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDYEILYHPGKANVVADALSRKVSH 480
           GEKI+IFTDHKSLKYFFTQKELNMRQRRWLELVKDYD EILYHPGKANVVADALSRKVSH
Sbjct: 659 GEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSH 718

Query: 481 SAALITRQAPLHRDFEKAEILVSVGAVTMQLAQLTVQPTLRQRIIDA 504
           SAALITRQAPLHRD E+AEI VSVGAVTMQLAQLTVQPTLRQRIIDA
Sbjct: 719 SAALITRQAPLHRDLERAEIAVSVGAVTMQLAQLTVQPTLRQRIIDA 765

[Close]

BLAST of Cmc08g0227531 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 80.5 bits (197), Expect = 4.3e-15
Identity = 42/124 (33.87%), Postives = 62/124 (50.00%), Query Frame = 0


Query: 235 HLRMVLQTLQDNKLYTKFSKCEFWLKQVSFLG--HVVSKAGVSVDPAKIEAVTSWPRPST 294
           HL MVLQ  + ++ Y    KC F   Q+++LG  H++S  GVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 295 VSEVRSFLGLAAPF-----------------------VWSKACEDSFQKLKQKLVTAPIL 334
            +E+R FLGL   +                        W++    +F+ LK  + T P+L
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNSLKWTEMAALAFKALKGAVTTLPVL 122

The following BLAST results are available for this feature:

BLAST of Cmc08g0227531 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048687.1	1.2e-264	88.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0037244.1	1.2e-264	88.61	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK01613.1	1.5e-264	88.61	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057672.1	1.3e-263	88.43	pol protein [Cucumis melo var. makuwa]	[more]
KAA0058464.1	2.2e-263	87.86	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0227531 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	3.0e-74	35.73	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	1.5e-73	35.98	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P0CT41	3.5e-70	33.33	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	3.5e-70	33.33	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	3.5e-70	33.33	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0227531 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T190	5.6e-265	88.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37...	[more]
A0A5A7U330	5.6e-265	88.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5D3BPI1	7.4e-265	88.61	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7UP94	6.2e-264	88.43	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00190 PE...	[more]
A0A5A7UTH9	1.1e-263	87.86	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold13...	[more]

BLAST of Cmc08g0227531 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	4.3e-15	33.87	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 302..336 e-value: 1.1E-5 score: 27.4
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 134..269 e-value: 1.4E-87 score: 294.4
None	No IPR available	GENE3D	3.10.20.370		coord: 337..403 e-value: 2.4E-7 score: 32.6
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 54..194 e-value: 1.4E-87 score: 294.4
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 305..441
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 305..441
None	No IPR available	PANTHER	PTHR24559:SF324	TRANSPOSON TY3-I GAG-POL POLYPROTEIN-LIKE PROTEIN	coord: 66..302
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 66..302
None	No IPR available	CDD	cd01647	RT_LTR	coord: 93..269 e-value: 1.21084E-90 score: 272.547
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 339..454 e-value: 6.15694E-57 score: 183.463
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 109..268 e-value: 2.4E-24 score: 86.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 90..269 score: 9.470088
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 337..432 e-value: 2.1E-31 score: 108.4
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 33..438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0227531.1	Cmc08g0227531.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding