Cmc08g0227061 (gene) Melon (Charmono) v1.1

Overview
NameCmc08g0227061
Typegene
OrganismCucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
DescriptionUnknown protein
LocationCMiso1.1chr08: 19865910 .. 19867234 (+)
RNA-Seq ExpressionCmc08g0227061
SyntenyCmc08g0227061
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTGTCATTTTAATATATATTATATATAATTTGTGAAAATAATTACACAAAGAATGGATTAGGTAAACATACACACAGAAACCTCTCTTAATTAAACTCTGAACAAAAGTGAAAAAAAAAAAAGAAAAGAAAAGAAAAGAATATATTATAACTATTTAATTAAAAAAGAATATATATCTGATGAAAAAGATTATAAAATAAATCAATTTAATTTTCCCTTCCCTCGCTTTTGTGCCCTAGAAGTACTCAAAATCCACGTAATTAGGATCACTCCCGGTAGAACCCGAACAATTCTCCGCCGCCGCAACCGCTGACGTTGCCGCTGCCGCTGCCGCTGCTACTTCCACCGCTCTCTTATCTTCTATCGCTCCGCTCGCGTTCCTCTTCCTAGCAAACTGCGTGAAATCCACCGGTTCCGGGACATGCGGCGGCATAGCACTTCTAACCAACGCCCAATTCACTCCATCGAAGAACGGATGCTGTTTAATCTCCGTCGCACCTCTCCGGTACGCAATTCTCTTTTGCGGCTCCTTAACAAGAAGTCCTCTGATCAGATCCCGAGCAGCTAGACTAACTTGCGGCGCCTCAGGGAATCTAAGCGGTTGTTCGACGACATTGAACAGAGTAGCTCTGTTTCCAGATCCTTTGAAGGGAGTAGTTCCGTGAAGAAGCTCGTAGAGGAAGATCCCGAAGGTCCACCAATCGACGGCGCTCCCGTGACCTTCGCCTTGGATGATCTCCGGAGCGAGATACTCGTGTGTGCCGACGAAGGACATGGATCTGACGTTAGTAGGTTCGGCCATGAGTTCGGGAAGGGATCCGCCGACGAAGAGGCCGAAATCTGATTTGGATTTTCGATTCTTCTTGGAAGGGAGGATGCGAGGGAGGAAATTGGAAGGTTGCATACAGCCGTGGACGACGAATTCGTCGTCGAGTATGCCGGCGCCGGATGGTCCAGCGTTGGTGGTGTTGTTGGCGGTGGTGGAGGTGGTGTTTACGTTGACGGAGGAGGATTTAACGAGAGTGGGACTGACGGAGCAGCGGAGAGAGAGGTCGAAATCGGAGAGCATGATGTGACCTTCGTCTCGGATTAAGAGATTTTCGGGTTTCAAATCCCTATAGACTATGCCTAACATGTGAAGGTATTCTAGTGCTAATAGAACCTCTGATGCATAGAACCTGTTTATTATATCACATTAAAAATTATATATATATATATATATATATATATACAATCCAAGTAATCCAATAATAAACATAAATTACAAATTGACATGCTAAAATAAAAAATTTCCTGTTAGTAAAGTTTGAGAGTTTCGAATAT

mRNA sequence

TGTTGTCATTTTAATATATATTATATATAATTTGTGAAAATAATTACACAAAGAATGGATTAGGTAAACATACACACAGAAACCTCTCTTAATTAAACTCTGAACAAAAGTGAAAAAAAAAAAAGAAAAGAAAAGAAAAGAATATATTATAACTATTTAATTAAAAAAGAATATATATCTGATGAAAAAGATTATAAAATAAATCAATTTAATTTTCCCTTCCCTCGCTTTTGTGCCCTAGAAGTACTCAAAATCCACGTAATTAGGATCACTCCCGGTAGAACCCGAACAATTCTCCGCCGCCGCAACCGCTGACGTTGCCGCTGCCGCTGCCGCTGCTACTTCCACCGCTCTCTTATCTTCTATCGCTCCGCTCGCGTTCCTCTTCCTAGCAAACTGCGTGAAATCCACCGGTTCCGGGACATGCGGCGGCATAGCACTTCTAACCAACGCCCAATTCACTCCATCGAAGAACGGATGCTGTTTAATCTCCGTCGCACCTCTCCGGTACGCAATTCTCTTTTGCGGCTCCTTAACAAGAAGTCCTCTGATCAGATCCCGAGCAGCTAGACTAACTTGCGGCGCCTCAGGGAATCTAAGCGGTTGTTCGACGACATTGAACAGAGTAGCTCTGTTTCCAGATCCTTTGAAGGGAGTAGTTCCGTGAAGAAGCTCGTAGAGGAAGATCCCGAAGGTCCACCAATCGACGGCGCTCCCGTGACCTTCGCCTTGGATGATCTCCGGAGCGAGATACTCGTGTGTGCCGACGAAGGACATGGATCTGACGTTAGTAGGTTCGGCCATGAGTTCGGGAAGGGATCCGCCGACGAAGAGGCCGAAATCTGATTTGGATTTTCGATTCTTCTTGGAAGGGAGGATGCGAGGGAGGAAATTGGAAGGTTGCATACAGCCGTGGACGACGAATTCGTCGTCGAGTATGCCGGCGCCGGATGGTCCAGCGTTGGTGGTGTTGTTGGCGGTGGTGGAGGTGGTGTTTACGTTGACGGAGGAGGATTTAACGAGAGTGGGACTGACGGAGCAGCGGAGAGAGAGGTCGAAATCGGAGAGCATGATGTGACCTTCGTCTCGGATTAAGAGATTTTCGGGTTTCAAATCCCTATAGACTATGCCTAACATGTGAAGGTATTCTAGTGCTAATAGAACCTCTGATGCATAGAACCTGTTTATTATATCACATTAAAAATTATATATATATATATATATATATATATACAATCCAAGTAATCCAATAATAAACATAAATTACAAATTGACATGCTAAAATAAAAAATTTCCTGTTAGTAAAGTTTGAGAGTTTCGAATAT

Coding sequence (CDS)

ATGATCTCCGGAGCGAGATACTCGTGTGTGCCGACGAAGGACATGGATCTGACGTTAGTAGGTTCGGCCATGAGTTCGGGAAGGGATCCGCCGACGAAGAGGCCGAAATCTGATTTGGATTTTCGATTCTTCTTGGAAGGGAGGATGCGAGGGAGGAAATTGGAAGGTTGCATACAGCCGTGGACGACGAATTCGTCGTCGAGTATGCCGGCGCCGGATGGTCCAGCGTTGGTGGTGTTGTTGGCGGTGGTGGAGGTGGTGTTTACGTTGACGGAGGAGGATTTAACGAGAGTGGGACTGACGGAGCAGCGGAGAGAGAGGTCGAAATCGGAGAGCATGATGTGA

Protein sequence

MISGARYSCVPTKDMDLTLVGSAMSSGRDPPTKRPKSDLDFRFFLEGRMRGRKLEGCIQPWTTNSSSSMPAPDGPALVVLLAVVEVVFTLTEEDLTRVGLTEQRRERSKSESMM
Homology
[Close]
BLAST of Cmc08g0227061 vs. NCBI nr
Match: KYP32038.1 (hypothetical protein KK1_047378, partial [Cajanus cajan])

HSP 1 Score: 98.6 bits (244), Expect = 3.7e-17
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 1  MISGARYSCVPTKDMDLTLVGSAMSSGRDPPTKRPKSDLDFRFFLEGRMRGRKLEGCIQP 60
          +ISGARYSCVPTKD+DLT VGSA+SSGR PPT RPKSD D RFF   +MRG+KLE  +QP
Sbjct: 34 IISGARYSCVPTKDIDLTFVGSAISSGRLPPTMRPKSDFDLRFFFGCKMRGKKLEDSMQP 93

Query: 61 WTT 64
          +TT
Sbjct: 94 YTT 96

[Close]
BLAST of Cmc08g0227061 vs. NCBI nr
Match: KAF1884039.1 (hypothetical protein Lal_00012999 [Lupinus albus])

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06
Identity = 40/75 (53.33%), Postives = 45/75 (60.00%), Query Frame = 0 

Query: 1  MISGARYSCVPTKDMDLTLVGSAMSSGRDPPTKRPKSDLDFRFFLE--GRMRGRKLEGCI 60
          MISGARYSCVPTKDMD   VGSA SSG   P   P S L FR FL   G++RG+K EG +
Sbjct: 1  MISGARYSCVPTKDMDRAAVGSATSSGSLLP-GNPGSALGFRDFLFFCGKIRGKKQEGWM 60

Query: 61 QP--------WTTNS 66
                    WT N+
Sbjct: 61 HTDEGSIHAGWTQNT 74

[Close]
BLAST of Cmc08g0227061 vs. ExPASy TrEMBL
Match: A0A151QP07 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_047378 PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 1.8e-17
Identity = 46/63 (73.02%), Postives = 53/63 (84.13%), Query Frame = 0 

Query: 1  MISGARYSCVPTKDMDLTLVGSAMSSGRDPPTKRPKSDLDFRFFLEGRMRGRKLEGCIQP 60
          +ISGARYSCVPTKD+DLT VGSA+SSGR PPT RPKSD D RFF   +MRG+KLE  +QP
Sbjct: 34 IISGARYSCVPTKDIDLTFVGSAISSGRLPPTMRPKSDFDLRFFFGCKMRGKKLEDSMQP 93

Query: 61 WTT 64
          +TT
Sbjct: 94 YTT 96

[Close]
BLAST of Cmc08g0227061 vs. ExPASy TrEMBL
Match: A0A0A9IYV1 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.3e-07
Identity = 47/114 (41.23%), Postives = 59/114 (51.75%), Query Frame = 0 

Query: 1   MISGARYSCVPTKDMDLTLVGSAMSSGRDPPTKRPKSDLDFRFFLEGRMRGRKLEGCIQP 60
           MISGARYS VPT + DL  VGS  S G D   +     L     +E   RG K E  +Q 
Sbjct: 1   MISGARYSWVPTNESDLASVGSTTSCGSDGFFRGSALGLRALDVVEETSRGVKQEELLQD 60

Query: 61  WTTNSSSSMPAPDGPALVVLLAVVEVVFTLTEEDLTRVGLTEQRRERSKSESMM 115
              +S S      GP  ++  +V       T++DLT +G TE  R+RSKSESMM
Sbjct: 61  GWIHSGSMQLCAQGPEGLLGSSVP------TDDDLTSIGFTEHLRDRSKSESMM 108

[Close]
BLAST of Cmc08g0227061 vs. ExPASy TrEMBL
Match: T1LK88 (Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.9e-07
Identity = 51/121 (42.15%), Postives = 62/121 (51.24%), Query Frame = 0 

Query: 1   MISGARYSCVPTKDMDLTLVGSAMSSGRDPPTKRPKSDLDFRFFLE-GRMRGRK------ 60
           +ISGA+YSCVPT D+D   +GSAMSSG    T    S   FR F +  + RG K      
Sbjct: 17  IISGAKYSCVPTNDIDRASLGSAMSSGHG-RTWLTTSGFGFRSFFDFEKNRGPKHVVGAV 76

Query: 61  LEGCIQPWTTNSSSSMPAPDGPALVVLLAVVEVVFTLTEEDLTRVGLTEQRRERSKSESM 115
            +GCI      S++S+   D                    DL RVGLT QRRERSKS+SM
Sbjct: 77  HDGCIM--QDGSAASVSGLD--------------------DLIRVGLTVQRRERSKSDSM 114

[Close]
BLAST of Cmc08g0227061 vs. ExPASy TrEMBL
Match: A0A6A5NG39 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00012999 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.1e-06
Identity = 40/75 (53.33%), Postives = 45/75 (60.00%), Query Frame = 0 

Query: 1  MISGARYSCVPTKDMDLTLVGSAMSSGRDPPTKRPKSDLDFRFFLE--GRMRGRKLEGCI 60
          MISGARYSCVPTKDMD   VGSA SSG   P   P S L FR FL   G++RG+K EG +
Sbjct: 1  MISGARYSCVPTKDMDRAAVGSATSSGSLLP-GNPGSALGFRDFLFFCGKIRGKKQEGWM 60

Query: 61 QP--------WTTNS 66
                    WT N+
Sbjct: 61 HTDEGSIHAGWTQNT 74

The following BLAST results are available for this feature:
BLAST of Cmc08g0227061 vs. NCBI nr
Match NameE-valueIdentityDescription
KYP32038.13.7e-1773.02hypothetical protein KK1_047378, partial [Cajanus cajan][more]
KAF1884039.12.2e-0653.33hypothetical protein Lal_00012999 [Lupinus albus][more]
BLAST of Cmc08g0227061 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Cmc08g0227061 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A151QP071.8e-1773.02Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_047378 PE=4 S... [more]
A0A0A9IYV11.3e-0741.23Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
T1LK884.9e-0742.15Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1[more]
A0A6A5NG391.1e-0653.33Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00012999 PE=4 SV=1[more]
BLAST of Cmc08g0227061 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cmc08g0227061.1Cmc08g0227061.1mRNA