Cmc08g0226431 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0226431
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 18432564 .. 18434120 (+)
RNA-Seq Expression	Cmc08g0226431
Synteny	Cmc08g0226431

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCTAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGAGGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCATGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCGATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACGGGAGTTGCTGGACAAAGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTGCCCAAGTTTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGTCAGGCTATCACCACTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCTTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGAAGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAAGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAAATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCACTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAGCAGAAACTGGTGACTGCACCAGTCCTGACAGTGCCCGATGGATCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTAAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGAAGCTGTAGTCTTTGCACTGAAGATATGGAGGCATTACCTGTACGGCGAGAAGATACAGATTTACACTGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTAG

mRNA sequence

ATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCTAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGAGGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCATGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCGATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACGGGAGTTGCTGGACAAAGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTGCCCAAGTTTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGTCAGGCTATCACCACTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCTTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGAAGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAAGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAAATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCACTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAGCAGAAACTGGTGACTGCACCAGTCCTGACAGTGCCCGATGGATCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTAAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGAAGCTGTAGTCTTTGCACTGAAGATATGGAGGCATTACCTGTACGGCGAGAAGATACAGATTTACACTGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTAG

Coding sequence (CDS)

ATGTTAGACGTGACCTTACTAGTGTTAGACATGCAGGATTTTGACGTGATTCTAGGCATGGATTGGCTGTCAGCTAACCATGCAAATATAGACTGTTTTGGCAAGGAAGTTGTCTTTAACCCTCCCTCCGAGGCTAGTTTCAAATTTAGGGGGGCAGGCATGGTATGTATACCCAAGGTCATCTCAGCCATGAAGGCTAGTAAACTACTCAGCCAGGGTACTTGGGGCATCTTGGCAAGCGTAGTGGATATTAGAGAGCCAGAAGTTTCCCTATCTTCCGAACCAGTGGTAAGGGAGTACCCTGACGTTTTCCCCGACGAACTCCATGGACTTCCGCCTCCCAGGGAGGTAGACTTCGCCATCGAGTTAGAGCCGGGCACTGCCCCGATCTCGAGGGCCCCTTACAGAATGGCTCCAGCCGAGCTAAAAGAGTTGAAGGTCCAGTTACGGGAGTTGCTGGACAAAGGTTTCATCCGGCCCAGTGTGTCACCTTGGGGAGCCCCAGTGTTGTTCGTGAAGAAGAAGGATGGGTCGATGCGCCTTTGTATTGACTACCGAGAGCTGAACAAGGTGACAGTTAAAAACCGCTACCCCTTGCCCAAGTTTGATGACTTGTTCGATCAGTTGCAGGGAGCCACTGTCTTTTCCAAGATCGACCTGCGGTCAGGCTATCACCACTTGAGGATTAGGGACGGTGACATTCCCAAGACGGCCTTTCGTTCGAGGTACGGACATTACGAGTTCTTTGTGATGTCTTTCGGCTTGACTAACGCTCCTGCAGTGTTCATGGATTTGAAGAACAGGGTGTTTAAGGACTTTCTAGACTCGTTCGTCATAGTCTTCATTGACGACATCTTGATTTACTCTAAAACTGAGGCTGAGCACGAGGAGCACTTGCACCAGGTTTTGGAGACTCTTCGAGCCAACAAGTTGTATGCCAAGTTCTCCAAGTGTGAATTCTGGTTAAAGAAGGTGACGTTCCTTGGCCACGTGGTTTCCAGTGAGGGAGTTTCTGTGGATCCAGCAAAAATTGAAGCGGTGACCAACTGGCCTCGACCGTCCACAGTTAGTGAAATTCGAAGTTTTCTGGGCTTGGCAGGTTACTACAGGAGGTTCGTGGAAGACTTCTCACGTATAGCCAGCCCGTTGACCCACTTGACCAGGAAGGGAACCCCTTTTGTCTGGAGCCCAGCATGCGAGAGTAGCTTTCAGGAGCTCAAGCAGAAACTGGTGACTGCACCAGTCCTGACAGTGCCCGATGGATCGGGAAGCTTTGTGATCTATAGTGATGCCTCCAAGAAGGGACTGGGCTGTGTCCTGATGCAGCAAGGTAAGGTAGTTGCTTATGCCTCCCGCCAGTTAAAGATTCATGAGCAGAACTACCCTACCCACGACTTGGAGTTGGAAGCTGTAGTCTTTGCACTGAAGATATGGAGGCATTACCTGTACGGCGAGAAGATACAGATTTACACTGACCATAAGAGCCTGAAGTACTTCTTCACTCAGAAGGAGTTGAACATGAGGCAGAGGAGGTGGCTCGAGTTGGTGAAAGACTAG

Protein sequence

MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKVISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFAIELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFRSRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD

Homology

[Close]

BLAST of Cmc08g0226431 vs. NCBI nr
Match: KAA0060745.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1022.3 bits (2642), Expect = 1.4e-294
Identity = 506/518 (97.68%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPS ASFKFRGAGMVCIPKV
Sbjct: 435 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 494

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDEL GLPPPREVDFA
Sbjct: 495 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 554

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 555 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 614

Query: 181 LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPK DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 615 LCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 674

Query: 241 SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 675 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 734

Query: 301 QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 735 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 794

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACESSFQELKQKLV APVLTVPD
Sbjct: 795 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPD 854

Query: 421 GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
           GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 855 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 914

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 915 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 952

[Close]

BLAST of Cmc08g0226431 vs. NCBI nr
Match: TYK20443.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1019.6 bits (2635), Expect = 9.4e-294
Identity = 503/518 (97.10%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 799  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 858

Query: 61   ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDEL GLPPPREVDFA
Sbjct: 859  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 918

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 919  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 978

Query: 181  LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLP+ DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 979  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1038

Query: 241  SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1039 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 1098

Query: 301  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIR
Sbjct: 1099 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1158

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 1159 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 1218

Query: 421  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
            GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 1219 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 1278

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 1279 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 1316

[Close]

BLAST of Cmc08g0226431 vs. NCBI nr
Match: TYK01576.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1019.6 bits (2635), Expect = 9.4e-294
Identity = 503/518 (97.10%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 800  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 859

Query: 61   ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDEL GLPPPREVDFA
Sbjct: 860  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 919

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 920  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 979

Query: 181  LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLP+ DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 980  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1039

Query: 241  SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1040 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 1099

Query: 301  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIR
Sbjct: 1100 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1159

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 1160 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 1219

Query: 421  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
            GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 1220 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 1279

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 1280 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 1317

[Close]

BLAST of Cmc08g0226431 vs. NCBI nr
Match: KAA0063793.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1019.6 bits (2635), Expect = 9.4e-294
Identity = 503/518 (97.10%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
           ISAMKASKLLS GTWGILASVVD+REPEVSLSSEPVVREYPDVFPD+L GLPPPREVDFA
Sbjct: 61  ISAMKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFA 120

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180

Query: 181 LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLP+ DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240

Query: 241 SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300

Query: 301 QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 301 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420

Query: 421 GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
           GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 421 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 518

[Close]

BLAST of Cmc08g0226431 vs. NCBI nr
Match: TYK06888.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1019.6 bits (2635), Expect = 9.4e-294
Identity = 503/518 (97.10%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 418 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 477

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDEL GLPPPREVDFA
Sbjct: 478 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 537

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 538 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 597

Query: 181 LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLP+ DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 598 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 657

Query: 241 SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 658 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 717

Query: 301 QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIR
Sbjct: 718 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 777

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 778 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 837

Query: 421 GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
           GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 838 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 897

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 898 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 935

[Close]

BLAST of Cmc08g0226431 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 4.5e-81
Identity = 151/384 (39.32%), Postives = 236/384 (61.46%), Query Frame = 0


Query: 135 YRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELN 194
           Y    A  +E++ Q++++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN
Sbjct: 213 YSYPQAYEQEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLN 272

Query: 195 KVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFRSRYGHYEFF 254
           ++TV +R+P+P  D++  +L     F+ IDL  G+H + +    + KTAF +++GHYE+ 
Sbjct: 273 EITVGDRHPIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYL 332

Query: 255 VMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQVLETLRAN 314
            M FGL NAPA F    N + +  L+   +V++DDI+++S +  EH + L  V E L   
Sbjct: 333 RMPFGLKNAPATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKA 392

Query: 315 KLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSFLGLAGYY 374
            L  +  KCEF  ++ TFLGHV++ +G+  +P KIEA+  +P P+   EI++FLGL GYY
Sbjct: 393 NLKLQLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYY 452

Query: 375 RRFVEDFSRIASPLTHLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDGSGSFVIY 434
           R+F+ +F+ IA P+T   +K       +P  +S+F++LK  +   P+L VPD +  F + 
Sbjct: 453 RKFIPNFADIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLT 512

Query: 435 SDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRHYLYGEKIQ 494
           +DAS   LG VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +
Sbjct: 513 TDASDVALGAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFE 572

Query: 495 IYTDHKSLKYFFTQKELNMRQRRW 513
           I +DH+ L + +  K+ N +  RW
Sbjct: 573 ISSDHQPLSWLYRMKDPNSKLTRW 596

[Close]

BLAST of Cmc08g0226431 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 2.7e-78
Identity = 147/391 (37.60%), Postives = 229/391 (58.57%), Query Frame = 0


Query: 128 APISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLC 187
           +PI    Y +A     E++ Q++E+L++G IR S SP+ +P   V KK         R+ 
Sbjct: 205 SPIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVV 264

Query: 188 IDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFRSR 247
           IDYR+LN++T+ +RYP+P  D++  +L     F+ IDL  G+H + + +  I KTAF ++
Sbjct: 265 IDYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTK 324

Query: 248 YGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLHQV 307
            GHYE+  M FGL NAPA F    N + +  L+   +V++DDI+I+S +  EH   +  V
Sbjct: 325 SGHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLV 384

Query: 308 LETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIRSF 367
              L    L  +  KCEF  K+  FLGH+V+ +G+  +P K++A+ ++P P+   EIR+F
Sbjct: 385 FTKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAF 444

Query: 368 LGLAGYYRRFVEDFSRIASPLTHLTRKGTPF-VWSPACESSFQELKQKLVTAPVLTVPDG 427
           LGL GYYR+F+ +++ IA P+T   +K T           +F++LK  ++  P+L +PD 
Sbjct: 445 LGLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDF 504

Query: 428 SGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRHY 487
              FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHY
Sbjct: 505 EKKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHY 564

Query: 488 LYGEKIQIYTDHKSLKYFFTQKELNMRQRRW 513
           L G +  I +DH+ L++    KE   +  RW
Sbjct: 565 LLGRQFLIASDHQPLRWLHNLKEPGAKLERW 595

[Close]

BLAST of Cmc08g0226431 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 280.0 bits (715), Expect = 5.3e-74
Identity = 163/472 (34.53%), Postives = 257/472 (54.45%), Query Frame = 0


Query: 65   KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELHGLPPPR 124
            +AS L   G +  + S +   EP  +  S           + ++Y ++  ++L    PPR
Sbjct: 546  EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDL----PPR 605

Query: 125  EVDF-------AIELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAP 184
              D         IE++PG       PY +     +E+   +++LLD  FI PS SP  +P
Sbjct: 606  PADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSP 665

Query: 185  VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLR 244
            V+ V KKDG+ RLC+DYR LNK T+ + +PLP+ D+L  ++  A +F+ +DL SGYH + 
Sbjct: 666  VVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIP 725

Query: 245  IRDGDIPKTAFRSRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIY 304
            +   D  KTAF +  G YE+ VM FGL NAP+ F       F+D    FV V++DDILI+
Sbjct: 726  MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 785

Query: 305  SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVT 364
            S++  EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K  A+ 
Sbjct: 786  SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 845

Query: 365  NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQ 424
            ++P P TV + + FLG+  YYRRF+ + S+IA P+       +   W+   + + ++LK 
Sbjct: 846  DFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIEKLKA 905

Query: 425  KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKIHEQNYP 484
             L  +PVL   +   ++ + +DASK G+G VL +         VV Y S+ L+  ++NYP
Sbjct: 906  ALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYP 965

Query: 485  THDLELEAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLE 515
              +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+
Sbjct: 966  AGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLD 1009

[Close]

BLAST of Cmc08g0226431 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 279.6 bits (714), Expect = 7.0e-74
Identity = 163/472 (34.53%), Postives = 256/472 (54.24%), Query Frame = 0


Query: 65  KASKLLSQGTWGILASVVDIREPEVSLSSEP---------VVREYPDVFPDELHGLPPPR 124
           +AS L   G +  + S +   EP  +  S           + ++Y ++  ++L    PPR
Sbjct: 520 EASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDL----PPR 579

Query: 125 EVDF-------AIELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAP 184
             D         IE++PG       PY +     +E+   +++LLD  FI PS SP  +P
Sbjct: 580 PADINNIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSP 639

Query: 185 VLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLR 244
           V+ V KKDG+ RLC+DYR LNK T+ + +PLP+ D+L  ++  A +F+ +DL SGYH + 
Sbjct: 640 VVLVPKKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIP 699

Query: 245 IRDGDIPKTAFRSRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIY 304
           +   D  KTAF +  G YE+ VM FGL NAP+ F       F+D    FV V++DDILI+
Sbjct: 700 MEPKDRYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIF 759

Query: 305 SKTEAEHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVT 364
           S++  EH +HL  VLE L+   L  K  KC+F  ++  FLG+ +  + ++    K  A+ 
Sbjct: 760 SESPEEHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIR 819

Query: 365 NWPRPSTVSEIRSFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQ 424
           ++P P TV + + FLG+  YYRRF+ + S+IA P+       +   W+   + +  +LK 
Sbjct: 820 DFPTPKTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIDKLKD 879

Query: 425 KLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYASRQLKIHEQNYP 484
            L  +PVL   +   ++ + +DASK G+G VL +         VV Y S+ L+  ++NYP
Sbjct: 880 ALCNSPVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYP 939

Query: 485 THDLELEAVVFALKIWRHYLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLE 515
             +LEL  ++ AL  +R+ L+G+   + TDH SL     + E   R +RWL+
Sbjct: 940 AGELELLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLD 983

[Close]

BLAST of Cmc08g0226431 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.0e-73
Identity = 169/541 (31.24%), Postives = 281/541 (51.94%), Query Frame = 0


Query: 3   DVTLLVL-DMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKVI 62
           D+T  VL ++  FD I+G D L    A +D     ++  P  +     R +  + +  ++
Sbjct: 19  DITFFVLPNLHSFDGIIGDDTLKDLKAIVDRKNNCLIITPGIKIPLLARAS--INVNPLL 78

Query: 63  SAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFAI 122
           +A         GT  IL S++                E+P +F   L G+     V+ A+
Sbjct: 79  AAEH-----PDGTQEILNSLLG---------------EFPRIFEPPLSGM----SVETAV 138

Query: 123 ELEPGT---APISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKK--- 182
           + E  T    PI    Y        E++ Q+ ELL  G IRPS SP+ +P+  V KK   
Sbjct: 139 KAEIRTNTQDPIYAKSYPYPVNMRGEVERQIDELLQDGIIRPSNSPYNSPIWIVPKKPKP 198

Query: 183 --DGSMRLCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGD 242
             +   R+ +D++ LN VT+ + YP+P  +     L  A  F+ +DL SG+H + +++ D
Sbjct: 199 NGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASLGNAKYFTTLDLTSGFHQIHMKESD 258

Query: 243 IPKTAFRSRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEA 302
           IPKTAF +  G YEF  + FGL NAPA+F  + + + ++ +     V+IDDI+++S+   
Sbjct: 259 IPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILREHIGKVCYVYIDDIIVFSEDYD 318

Query: 303 EHEEHLHQVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRP 362
            H ++L  VL +L    L     K  F   +V FLG++V+++G+  DP K+ A++  P P
Sbjct: 319 THWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLGYIVTADGIKADPKKVRAISEMPPP 378

Query: 363 STVSEIRSFLGLAGYYRRFVEDFSRIASPLTHLTR-----------KGTPFVWSPACESS 422
           ++V E++ FLG+  YYR+F++D++++A PLT+LTR              P         S
Sbjct: 379 TSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRGLYANIKSSQSSKVPITLDETALQS 438

Query: 423 FQELKQKLVTAPVLTVPDGSGSFVIYSDASKKGLGCVLMQ----QGKVVAYASRQLKIHE 482
           F +LK  L ++ +L  P  +  F + +DAS   +G VL Q    + + +AY SR L   E
Sbjct: 439 FNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGAVLSQDDQGRDRPIAYISRSLNKTE 498

Query: 483 QNYPTHDLELEAVVFALKIWRHYLYGE-KIQIYTDHKSLKYFFTQKELNMRQRRWLELVK 519
           +NY T + E+ A++++L   R YLYG   I++YTDH+ L +    +  N + +RW   ++
Sbjct: 499 ENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDHQPLTFALGNRNFNAKLKRWKARIE 533

[Close]

BLAST of Cmc08g0226431 vs. ExPASy TrEMBL
Match: A0A5A7V4E4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72G00400 PE=4 SV=1)

HSP 1 Score: 1022.3 bits (2642), Expect = 7.0e-295
Identity = 506/518 (97.68%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPS ASFKFRGAGMVCIPKV
Sbjct: 435 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSGASFKFRGAGMVCIPKV 494

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDEL GLPPPREVDFA
Sbjct: 495 ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 554

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 555 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 614

Query: 181 LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLPK DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 615 LCIDYRELNKVTVKNRYPLPKIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 674

Query: 241 SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 675 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 734

Query: 301 QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 735 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 794

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACESSFQELKQKLV APVLTVPD
Sbjct: 795 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACESSFQELKQKLVIAPVLTVPD 854

Query: 421 GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
           GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 855 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 914

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 915 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 952

[Close]

BLAST of Cmc08g0226431 vs. ExPASy TrEMBL
Match: A0A5A7V6R2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold827G00070 PE=4 SV=1)

HSP 1 Score: 1019.6 bits (2635), Expect = 4.6e-294
Identity = 503/518 (97.10%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
           ISAMKASKLLS GTWGILASVVD+REPEVSLSSEPVVREYPDVFPD+L GLPPPREVDFA
Sbjct: 61  ISAMKASKLLSHGTWGILASVVDMREPEVSLSSEPVVREYPDVFPDKLPGLPPPREVDFA 120

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 121 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180

Query: 181 LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLP+ DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 181 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 240

Query: 241 SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 241 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300

Query: 301 QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR
Sbjct: 301 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 361 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 420

Query: 421 GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
           GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 421 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 480

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 518

[Close]

BLAST of Cmc08g0226431 vs. ExPASy TrEMBL
Match: A0A5D3BTN0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G001560 PE=4 SV=1)

HSP 1 Score: 1019.6 bits (2635), Expect = 4.6e-294
Identity = 503/518 (97.10%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 800  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 859

Query: 61   ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDEL GLPPPREVDFA
Sbjct: 860  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 919

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 920  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 979

Query: 181  LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLP+ DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 980  LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1039

Query: 241  SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1040 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 1099

Query: 301  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIR
Sbjct: 1100 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1159

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 1160 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 1219

Query: 421  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
            GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 1220 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 1279

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 1280 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 1317

[Close]

BLAST of Cmc08g0226431 vs. ExPASy TrEMBL
Match: A0A5D3C6W3 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G001930 PE=4 SV=1)

HSP 1 Score: 1019.6 bits (2635), Expect = 4.6e-294
Identity = 503/518 (97.10%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1   MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
           MLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 418 MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 477

Query: 61  ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
           ISAMKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDEL GLPPPREVDFA
Sbjct: 478 ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 537

Query: 121 IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
           IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 538 IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 597

Query: 181 LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
           LCIDYRELNKVTVKNRYPLP+ DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 598 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 657

Query: 241 SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
           SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 658 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 717

Query: 301 QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
           QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIR
Sbjct: 718 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 777

Query: 361 SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
           SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 778 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 837

Query: 421 GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
           GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 838 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 897

Query: 481 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
           YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 898 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 935

[Close]

BLAST of Cmc08g0226431 vs. ExPASy TrEMBL
Match: A0A5A7V2A0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold154G001000 PE=4 SV=1)

HSP 1 Score: 1019.6 bits (2635), Expect = 4.6e-294
Identity = 503/518 (97.10%), Postives = 509/518 (98.26%), Query Frame = 0


Query: 1    MLDVTLLVLDMQDFDVILGMDWLSANHANIDCFGKEVVFNPPSEASFKFRGAGMVCIPKV 60
            MLDVTLLVLDMQDFDVILGMDWLSANHANIDC+GKEVVFNPPSEASFKFRGAGMVCIPKV
Sbjct: 846  MLDVTLLVLDMQDFDVILGMDWLSANHANIDCYGKEVVFNPPSEASFKFRGAGMVCIPKV 905

Query: 61   ISAMKASKLLSQGTWGILASVVDIREPEVSLSSEPVVREYPDVFPDELHGLPPPREVDFA 120
            ISAMKASKLLSQGTWGILASVVD+REPEVSLSSEPVVREYPDVFPDEL GLPPPREVDFA
Sbjct: 906  ISAMKASKLLSQGTWGILASVVDVREPEVSLSSEPVVREYPDVFPDELPGLPPPREVDFA 965

Query: 121  IELEPGTAPISRAPYRMAPAELKELKVQLRELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 180
            IELEPGTAPISRAPYRMAPAELKELKVQL+ELLDKGFIRPSVSPWGAPVLFVKKKDGSMR
Sbjct: 966  IELEPGTAPISRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMR 1025

Query: 181  LCIDYRELNKVTVKNRYPLPKFDDLFDQLQGATVFSKIDLRSGYHHLRIRDGDIPKTAFR 240
            LCIDYRELNKVTVKNRYPLP+ DDLFDQLQGATVFSKIDLRSGYH LRIRDGDIPKTAFR
Sbjct: 1026 LCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIRDGDIPKTAFR 1085

Query: 241  SRYGHYEFFVMSFGLTNAPAVFMDLKNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 300
            SRYGHYEF VMSFGLTNAPAVFMDL NRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH
Sbjct: 1086 SRYGHYEFVVMSFGLTNAPAVFMDLMNRVFKDFLDSFVIVFIDDILIYSKTEAEHEEHLH 1145

Query: 301  QVLETLRANKLYAKFSKCEFWLKKVTFLGHVVSSEGVSVDPAKIEAVTNWPRPSTVSEIR 360
            QVLETLRANKLYAKFSKCEFWL+KVTFLGHVVSSEGVSVDPAKIEAVTNW RPSTVSEIR
Sbjct: 1146 QVLETLRANKLYAKFSKCEFWLRKVTFLGHVVSSEGVSVDPAKIEAVTNWTRPSTVSEIR 1205

Query: 361  SFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPVLTVPD 420
            SFLGLAGYYRRFVEDFSRIASPLT LTRKGTPFVWSPACE SFQELKQKLVTAPVLTVPD
Sbjct: 1206 SFLGLAGYYRRFVEDFSRIASPLTQLTRKGTPFVWSPACERSFQELKQKLVTAPVLTVPD 1265

Query: 421  GSGSFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELEAVVFALKIWRH 480
            GSG+FVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLEL AVVFALKIWRH
Sbjct: 1266 GSGNFVIYSDASKKGLGCVLMQQGKVVAYASRQLKIHEQNYPTHDLELAAVVFALKIWRH 1325

Query: 481  YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 519
            YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD
Sbjct: 1326 YLYGEKIQIYTDHKSLKYFFTQKELNMRQRRWLELVKD 1363

[Close]

BLAST of Cmc08g0226431 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 119.4 bits (298), Expect = 8.6e-27
Identity = 57/131 (43.51%), Postives = 80/131 (61.07%), Query Frame = 0


Query: 298 HLHQVLETLRANKLYAKFSKCEFWLKKVTFLG--HVVSSEGVSVDPAKIEAVTNWPRPST 357
           HL  VL+    ++ YA   KC F   ++ +LG  H++S EGVS DPAK+EA+  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 358 VSEIRSFLGLAGYYRRFVEDFSRIASPLTHLTRKGTPFVWSPACESSFQELKQKLVTAPV 417
            +E+R FLGL GYYRRFV+++ +I  PLT L +K +   W+     +F+ LK  + T PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 418 LTVPDGSGSFV 427
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc08g0226431 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0060745.1	1.4e-294	97.68	pol protein [Cucumis melo var. makuwa]	[more]
TYK20443.1	9.4e-294	97.10	pol protein [Cucumis melo var. makuwa]	[more]
TYK01576.1	9.4e-294	97.10	pol protein [Cucumis melo var. makuwa]	[more]
KAA0063793.1	9.4e-294	97.10	pol protein [Cucumis melo var. makuwa]	[more]
TYK06888.1	9.4e-294	97.10	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0226431 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P04323	4.5e-81	39.32	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
P20825	2.7e-78	37.60	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
Q7LHG5	5.3e-74	34.53	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q99315	7.0e-74	34.53	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q8I7P9	2.0e-73	31.24	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]

BLAST of Cmc08g0226431 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V4E4	7.0e-295	97.68	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold72...	[more]
A0A5A7V6R2	4.6e-294	97.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82...	[more]
A0A5D3BTN0	4.6e-294	97.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5D3C6W3	4.6e-294	97.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13...	[more]
A0A5A7V2A0	4.6e-294	97.10	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold15...	[more]

BLAST of Cmc08g0226431 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	8.6e-27	43.51	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF08284	RVP_2	coord: 4..42 e-value: 1.6E-12 score: 47.4
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 118..257 e-value: 4.5E-91 score: 305.9
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 6..518
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 6..518
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 426..515 e-value: 3.00084E-43 score: 147.639
None	No IPR available	CDD	cd01647	RT_LTR	coord: 156..332 e-value: 2.93603E-93 score: 279.865
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 342..432 e-value: 1.3E-32 score: 113.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 197..332 e-value: 4.5E-91 score: 305.9
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 423..515 e-value: 1.1E-32 score: 112.4
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 172..331 e-value: 1.7E-26 score: 93.1
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 153..332 score: 9.531586
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..49 e-value: 6.3E-8 score: 34.5
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 96..516

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0226431.1	Cmc08g0226431.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008194	UDP-glycosyltransferase activity
molecular_function	GO:0008270	zinc ion binding