Cmc08g0226211 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0226211
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Gag-pol polyprotein
Location	CMiso1.1chr08: 17890317 .. 17891072 (+)
RNA-Seq Expression	Cmc08g0226211
Synteny	Cmc08g0226211

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGTCAAAAGTGCCTTTTTAAATGGTTACTTGAATGAGGAAGTCTTTGTAGCTCAACCAAAAGGGTTTGTTGATTCTGAATTTCCTCATCATGTTTACAAGCTCAATAAAGCTTTGTATGGGTTAAAGCAAGCTCCTCGAGCTTGGTATGAACGCTTAACAATCTATCTGGGTGATAAAGGATACTCTAGAAATGGAACTAGTAAGACATTATTTATTAATAGAACCAGCAGTGAGCTCATTATAGCACAGATTTATGTTGATGATATTATATTTGGGGTATTTCCCAAGGCACTTATTGGTAACTTCATTAACATAATGAAATCAGAATTTGAAATGAGCATGGTAGGAGAACTTTCTTGTTTTCTAGGTCTACAGATCAAACAAAGAAGTATATTTATATCTCAAGAGAAGTATGTCAAGAACTTAGTCAAAAAATTTGGTCTGGATCAGTGTCAACATAAAAGGACTTCAGTGGCGACACATGTTAAAGTTACTAAAGACATTAATGGTACAGTAGTAGATCACAAACTGTATAGAAGCTTGGTTGGGAGTCTTCTATATTTAATGGCAAGCAAACTTGACATTGCCTATGCTGTTGGAATATGTGCTCGATTTCAGTCAGATCCTCGTACTTCTCATTTGACCGTTGTTAAACGGATTCTCAAATATGTACATGGGACGAGTGACTTTGGAATTTTGTATTCATTTAACACGACTTCTACCTTGGTTGGATATTGTGATGCTGATTAG

mRNA sequence

ATGGATGTCAAAAGTGCCTTTTTAAATGGTTACTTGAATGAGGAAGTCTTTGTAGCTCAACCAAAAGGGTTTGTTGATTCTGAATTTCCTCATCATGTTTACAAGCTCAATAAAGCTTTGTATGGGTTAAAGCAAGCTCCTCGAGCTTGGTATGAACGCTTAACAATCTATCTGGGTGATAAAGGATACTCTAGAAATGGAACTAGTAAGACATTATTTATTAATAGAACCAGCAGTGAGCTCATTATAGCACAGATTTATGTTGATGATATTATATTTGGGGTATTTCCCAAGGCACTTATTGGTAACTTCATTAACATAATGAAATCAGAATTTGAAATGAGCATGGTAGGAGAACTTTCTTGTTTTCTAGGTCTACAGATCAAACAAAGAAGTATATTTATATCTCAAGAGAAGTATGTCAAGAACTTAGTCAAAAAATTTGGTCTGGATCAGTGTCAACATAAAAGGACTTCAGTGGCGACACATGTTAAAGTTACTAAAGACATTAATGGTACAGTAGTAGATCACAAACTGTATAGAAGCTTGGTTGGGAGTCTTCTATATTTAATGGCAAGCAAACTTGACATTGCCTATGCTGTTGGAATATGTGCTCGATTTCAGTCAGATCCTCGTACTTCTCATTTGACCGTTGTTAAACGGATTCTCAAATATGTACATGGGACGAGTGACTTTGGAATTTTGTATTCATTTAACACGACTTCTACCTTGGTTGGATATTGTGATGCTGATTAG

Coding sequence (CDS)

ATGGATGTCAAAAGTGCCTTTTTAAATGGTTACTTGAATGAGGAAGTCTTTGTAGCTCAACCAAAAGGGTTTGTTGATTCTGAATTTCCTCATCATGTTTACAAGCTCAATAAAGCTTTGTATGGGTTAAAGCAAGCTCCTCGAGCTTGGTATGAACGCTTAACAATCTATCTGGGTGATAAAGGATACTCTAGAAATGGAACTAGTAAGACATTATTTATTAATAGAACCAGCAGTGAGCTCATTATAGCACAGATTTATGTTGATGATATTATATTTGGGGTATTTCCCAAGGCACTTATTGGTAACTTCATTAACATAATGAAATCAGAATTTGAAATGAGCATGGTAGGAGAACTTTCTTGTTTTCTAGGTCTACAGATCAAACAAAGAAGTATATTTATATCTCAAGAGAAGTATGTCAAGAACTTAGTCAAAAAATTTGGTCTGGATCAGTGTCAACATAAAAGGACTTCAGTGGCGACACATGTTAAAGTTACTAAAGACATTAATGGTACAGTAGTAGATCACAAACTGTATAGAAGCTTGGTTGGGAGTCTTCTATATTTAATGGCAAGCAAACTTGACATTGCCTATGCTGTTGGAATATGTGCTCGATTTCAGTCAGATCCTCGTACTTCTCATTTGACCGTTGTTAAACGGATTCTCAAATATGTACATGGGACGAGTGACTTTGGAATTTTGTATTCATTTAACACGACTTCTACCTTGGTTGGATATTGTGATGCTGATTAG

Protein sequence

MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGDKGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGELSCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSFNTTSTLVGYCDAD

Homology

[Close]

BLAST of Cmc08g0226211 vs. NCBI nr
Match: TYK29824.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 491.1 bits (1263), Expect = 5.6e-135
Identity = 245/251 (97.61%), Postives = 248/251 (98.80%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDVKSAFLNGYLNEEVFVAQPKGFVDSEFP HVYKLNKALYGLKQAPRAWY+RLTIYLGD
Sbjct: 410 MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYKRLTIYLGD 469

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
           KGYSR+GTSKTLFINRTSSELIIAQIYVDDIIFG FPKA IGNFINIMKSEFEMSMVGEL
Sbjct: 470 KGYSRSGTSKTLFINRTSSELIIAQIYVDDIIFGGFPKAFIGNFINIMKSEFEMSMVGEL 529

Query: 121 SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY 180
           SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY
Sbjct: 530 SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY 589

Query: 181 RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSFNT 240
           RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF+T
Sbjct: 590 RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSFDT 649

Query: 241 TSTLVGYCDAD 252
           TSTLVGYCDAD
Sbjct: 650 TSTLVGYCDAD 660

[Close]

BLAST of Cmc08g0226211 vs. NCBI nr
Match: KAA0035790.1 (putative gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 451.1 bits (1159), Expect = 6.5e-123
Identity = 226/231 (97.84%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD
Sbjct: 162 MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 221

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
           KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL
Sbjct: 222 KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 281

Query: 121 SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY 180
           SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY
Sbjct: 282 SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY 341

Query: 181 RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSD 232
           RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKY     D
Sbjct: 342 RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYAGSPDD 392

[Close]

BLAST of Cmc08g0226211 vs. NCBI nr
Match: TYJ98295.1 (gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 414.5 bits (1064), Expect = 6.7e-112
Identity = 201/253 (79.45%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDVKSAFLNGYLNEEV+VAQPKGF+DSEFP +VYK+NKALYGLKQAPRAWYERL IYL +
Sbjct: 533 MDVKSAFLNGYLNEEVYVAQPKGFIDSEFPQYVYKINKALYGLKQAPRAWYERLIIYLDE 592

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
           +GYS+  T KTLFINRTS++LI+AQIYVDDIIFG FPK L+ NFINI+KSEFE+S+VG+L
Sbjct: 593 RGYSKGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIIKSEFEISLVGKL 652

Query: 121 SCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHK 180
           S FLGLQIKQRS  +FISQEKY KNLVKKFGLDQ Q+KRT  ATHVK+TKD  GT +DHK
Sbjct: 653 SYFLGLQIKQRSKGMFISQEKYAKNLVKKFGLDQSQYKRTLAATHVKITKDTVGTAIDHK 712

Query: 181 LYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF 240
           LYRS++GSLLYL AS+ DIAYAVGICAR+QSDPRTSHL  VKRI+KYVHGT+DFGILYS+
Sbjct: 713 LYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNAVKRIIKYVHGTTDFGILYSY 772

Query: 241 NTTSTLVGYCDAD 252
           +T+S LVGYCDAD
Sbjct: 773 DTSSELVGYCDAD 785

[Close]

BLAST of Cmc08g0226211 vs. NCBI nr
Match: KAA0054623.1 (putative mitochondrial protein [Cucumis melo var. makuwa])

HSP 1 Score: 404.4 bits (1038), Expect = 6.9e-109
Identity = 198/253 (78.26%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDVKSAFLNGYLNEEV+VAQPK F+DSEFPH +YKLNKALYGLKQAP  WYE+LT+YLG+
Sbjct: 507 MDVKSAFLNGYLNEEVYVAQPKRFIDSEFPHKLYKLNKALYGLKQAPLTWYEQLTMYLGE 566

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
           +GYSR  T KTL INRTS++LI+AQIYVDDIIFG FPK L+ NFINIM SEFEMS+VGEL
Sbjct: 567 RGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGEL 626

Query: 121 SCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHK 180
           SCFLGLQIKQRS  +F+SQEKY KNLVKKFGLDQ Q+KRT  ATH K+TKD  GT VDHK
Sbjct: 627 SCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGTAVDHK 686

Query: 181 LYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF 240
           LYRS++GS LYL AS+ DIAYAV ICAR+QSDP TSHL  VKRI+KYVHGT+DFGILYS+
Sbjct: 687 LYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSY 746

Query: 241 NTTSTLVGYCDAD 252
           +T S LVGYCDAD
Sbjct: 747 DTFSKLVGYCDAD 759

[Close]

BLAST of Cmc08g0226211 vs. NCBI nr
Match: KAA0054435.1 (gag-pol polyprotein [Cucumis melo var. makuwa] >TYK14601.1 gag-pol polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 401.4 bits (1030), Expect = 5.9e-108
Identity = 197/253 (77.87%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1    MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
            M VKSAFLNGYLNEEV+V QPKGFVD EFP +VYKLNKALY LKQAP+AWYERLT+YLG+
Sbjct: 758  MHVKSAFLNGYLNEEVYVTQPKGFVDPEFPQYVYKLNKALYRLKQAPQAWYERLTMYLGE 817

Query: 61   KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
            + YSR  T KTLFINRTS+ LI+AQIYVDDIIFG FPK L+ NFINIMKSEFEMS+VGEL
Sbjct: 818  RVYSRGETDKTLFINRTSTNLIVAQIYVDDIIFGGFPKTLVDNFINIMKSEFEMSLVGEL 877

Query: 121  SCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHK 180
            SCFLGLQIKQRS  +FISQEKY KNLVKKFGLDQ QHKRT   TH K+TKD+ GT VDHK
Sbjct: 878  SCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLDQSQHKRTPAVTHAKITKDMVGTEVDHK 937

Query: 181  LYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF 240
            LYRS++GSLLYL  S+ DIAY VGICAR+QSD RTSHL  +KRI+KYVHGT+DFGILYS+
Sbjct: 938  LYRSMIGSLLYLTTSRPDIAYVVGICARYQSDSRTSHLNAIKRIIKYVHGTTDFGILYSY 997

Query: 241  NTTSTLVGYCDAD 252
            +T+S LVGY +AD
Sbjct: 998  DTSSELVGYYNAD 1010

[Close]

BLAST of Cmc08g0226211 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 4.2e-40
Identity = 91/253 (35.97%), Postives = 144/253 (56.92%), Query Frame = 0


Query: 1    MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
            +DV +AFL G L ++V+++QP GF+D + P++V KL KALYGLKQAPRAWY  L  YL  
Sbjct: 1064 LDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLT 1123

Query: 61   KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
             G+  + +  +LF+ +    ++   +YVDDI+       L+ N ++ +   F +    EL
Sbjct: 1124 IGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEEL 1183

Query: 121  SCFLGLQIKQ--RSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHK 180
              FLG++ K+    + +SQ +Y+ +L+ +  +   +   T +A   K++      + D  
Sbjct: 1184 HYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPT 1243

Query: 181  LYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF 240
             YR +VGSL YL  ++ DI+YAV   ++F   P   HL  +KRIL+Y+ GT + GI    
Sbjct: 1244 EYRGIVGSLQYLAFTRPDISYAVNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKK 1303

Query: 241  NTTSTLVGYCDAD 252
              T +L  Y DAD
Sbjct: 1304 GNTLSLHAYSDAD 1316

[Close]

BLAST of Cmc08g0226211 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 1.2e-39
Identity = 89/253 (35.18%), Postives = 143/253 (56.52%), Query Frame = 0


Query: 1    MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
            +DV +AFL G L +EV+++QP GFVD + P +V +L KA+YGLKQAPRAWY  L  YL  
Sbjct: 1047 LDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTYLLT 1106

Query: 61   KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
             G+  + +  +LF+ +    +I   +YVDDI+       L+ + ++ +   F +    +L
Sbjct: 1107 VGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEHEDL 1166

Query: 121  SCFLGLQIKQ--RSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHK 180
              FLG++ K+  + + +SQ +Y  +L+ +  +   +   T +AT  K+T      + D  
Sbjct: 1167 HYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLPDPT 1226

Query: 181  LYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF 240
             YR +VGSL YL  ++ D++YAV   +++   P   H   +KR+L+Y+ GT D GI    
Sbjct: 1227 EYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVLRYLAGTPDHGIFLKK 1286

Query: 241  NTTSTLVGYCDAD 252
              T +L  Y DAD
Sbjct: 1287 GNTLSLHAYSDAD 1299

[Close]

BLAST of Cmc08g0226211 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 7.9e-39
Identity = 95/263 (36.12%), Postives = 151/263 (57.41%), Query Frame = 0


Query: 1    MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
            +DVK+AFL+G L EE+++ QP+GF  +   H V KLNK+LYGLKQAPR WY +   ++  
Sbjct: 921  LDVKTAFLHGDLEEEIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKS 980

Query: 61   KGYSRNGTSKTLFINRTS-SELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGE 120
            + Y +  +   ++  R S +  II  +YVDD++     K LI      +   F+M  +G 
Sbjct: 981  QTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGP 1040

Query: 121  LSCFLGLQI----KQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVV 180
                LG++I      R +++SQEKY++ ++++F +   +   T +A H+K++K +  T V
Sbjct: 1041 AQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTV 1100

Query: 181  DHK------LYRSLVGSLLYLM-ASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHG 240
            + K       Y S VGSL+Y M  ++ DIA+AVG+ +RF  +P   H   VK IL+Y+ G
Sbjct: 1101 EEKGNMAKVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRG 1160

Query: 241  TSDFGILYSFNTTSTLVGYCDAD 252
            T+   + +   +   L GY DAD
Sbjct: 1161 TTGDCLCFG-GSDPILKGYTDAD 1182

[Close]

BLAST of Cmc08g0226211 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 137.9 bits (346), Expect = 1.6e-31
Identity = 82/258 (31.78%), Postives = 143/258 (55.43%), Query Frame = 0


Query: 1    MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
            MDVK+AFLNG L EE+++  P+G   S    +V KLNKA+YGLKQA R W+E     L +
Sbjct: 1001 MDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAIYGLKQAARCWFEVFEQALKE 1060

Query: 61   KGYSRNGTSKTLFI--NRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVG 120
              +  +   + ++I      +E I   +YVDD++        + NF   +  +F M+ + 
Sbjct: 1061 CEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDMTRMNNFKRYLMEKFRMTDLN 1120

Query: 121  ELSCFLGLQIKQR--SIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVD 180
            E+  F+G++I+ +   I++SQ  YVK ++ KF ++ C    T + + +   + +N     
Sbjct: 1121 EIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINY-ELLNSDEDC 1180

Query: 181  HKLYRSLVGSLLYLM-ASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGIL 240
            +   RSL+G L+Y+M  ++ D+  AV I +R+ S   +     +KR+L+Y+ GT D  ++
Sbjct: 1181 NTPCRSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYLKGTIDMKLI 1240

Query: 241  YSFNTT--STLVGYCDAD 252
            +  N    + ++GY D+D
Sbjct: 1241 FKKNLAFENKIIGYVDSD 1255

[Close]

BLAST of Cmc08g0226211 vs. ExPASy Swiss-Prot
Match: P25600 (Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY5A PE=5 SV=2)

HSP 1 Score: 130.2 bits (326), Expect = 3.3e-29
Identity = 77/254 (30.31%), Postives = 128/254 (50.39%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDV +AFLN  ++E ++V QP GFV+   P +V++L   +YGLKQAP  W E +   L  
Sbjct: 1   MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
            G+ R+     L+   TS   I   +YVDD++       +       +   + M  +G++
Sbjct: 61  IGFCRHEGEHGLYFRSTSDGPIYIAVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120

Query: 121 SCFLGLQIKQRS---IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDH 180
             FLGL I Q S   I +S + Y+     +  ++  +  +T +     + +  +  + D 
Sbjct: 121 DKFLGLNIHQSSNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180

Query: 181 KLYRSLVGSLLYLM-ASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILY 240
             Y+S+VG LL+     + DI+Y V + +RF  +PR  HL   +R+L+Y++ T    + Y
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240

Query: 241 SFNTTSTLVGYCDA 251
              +   L  YCDA
Sbjct: 241 RSGSQLALTVYCDA 254

[Close]

BLAST of Cmc08g0226211 vs. ExPASy TrEMBL
Match: A0A5D3E1T0 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold208G00520 PE=4 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 2.7e-135
Identity = 245/251 (97.61%), Postives = 248/251 (98.80%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDVKSAFLNGYLNEEVFVAQPKGFVDSEFP HVYKLNKALYGLKQAPRAWY+RLTIYLGD
Sbjct: 410 MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPQHVYKLNKALYGLKQAPRAWYKRLTIYLGD 469

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
           KGYSR+GTSKTLFINRTSSELIIAQIYVDDIIFG FPKA IGNFINIMKSEFEMSMVGEL
Sbjct: 470 KGYSRSGTSKTLFINRTSSELIIAQIYVDDIIFGGFPKAFIGNFINIMKSEFEMSMVGEL 529

Query: 121 SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY 180
           SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY
Sbjct: 530 SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY 589

Query: 181 RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSFNT 240
           RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF+T
Sbjct: 590 RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSFDT 649

Query: 241 TSTLVGYCDAD 252
           TSTLVGYCDAD
Sbjct: 650 TSTLVGYCDAD 660

[Close]

BLAST of Cmc08g0226211 vs. ExPASy TrEMBL
Match: A0A5A7SXM5 (Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold403G00750 PE=4 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 3.1e-123
Identity = 226/231 (97.84%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD
Sbjct: 162 MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 221

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
           KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL
Sbjct: 222 KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 281

Query: 121 SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY 180
           SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY
Sbjct: 282 SCFLGLQIKQRSIFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHKLY 341

Query: 181 RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSD 232
           RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKY     D
Sbjct: 342 RSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYAGSPDD 392

[Close]

BLAST of Cmc08g0226211 vs. ExPASy TrEMBL
Match: A0A5D3BIP9 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G00070 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 3.2e-112
Identity = 201/253 (79.45%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDVKSAFLNGYLNEEV+VAQPKGF+DSEFP +VYK+NKALYGLKQAPRAWYERL IYL +
Sbjct: 533 MDVKSAFLNGYLNEEVYVAQPKGFIDSEFPQYVYKINKALYGLKQAPRAWYERLIIYLDE 592

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
           +GYS+  T KTLFINRTS++LI+AQIYVDDIIFG FPK L+ NFINI+KSEFE+S+VG+L
Sbjct: 593 RGYSKGETDKTLFINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIIKSEFEISLVGKL 652

Query: 121 SCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHK 180
           S FLGLQIKQRS  +FISQEKY KNLVKKFGLDQ Q+KRT  ATHVK+TKD  GT +DHK
Sbjct: 653 SYFLGLQIKQRSKGMFISQEKYAKNLVKKFGLDQSQYKRTLAATHVKITKDTVGTAIDHK 712

Query: 181 LYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF 240
           LYRS++GSLLYL AS+ DIAYAVGICAR+QSDPRTSHL  VKRI+KYVHGT+DFGILYS+
Sbjct: 713 LYRSMIGSLLYLTASRPDIAYAVGICARYQSDPRTSHLNAVKRIIKYVHGTTDFGILYSY 772

Query: 241 NTTSTLVGYCDAD 252
           +T+S LVGYCDAD
Sbjct: 773 DTSSELVGYCDAD 785

[Close]

BLAST of Cmc08g0226211 vs. ExPASy TrEMBL
Match: A0A5A7UF87 (Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G004260 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.4e-109
Identity = 198/253 (78.26%), Postives = 222/253 (87.75%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
           MDVKSAFLNGYLNEEV+VAQPK F+DSEFPH +YKLNKALYGLKQAP  WYE+LT+YLG+
Sbjct: 507 MDVKSAFLNGYLNEEVYVAQPKRFIDSEFPHKLYKLNKALYGLKQAPLTWYEQLTMYLGE 566

Query: 61  KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
           +GYSR  T KTL INRTS++LI+AQIYVDDIIFG FPK L+ NFINIM SEFEMS+VGEL
Sbjct: 567 RGYSRGETDKTLLINRTSTDLIVAQIYVDDIIFGGFPKTLVNNFINIMTSEFEMSLVGEL 626

Query: 121 SCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHK 180
           SCFLGLQIKQRS  +F+SQEKY KNLVKKFGLDQ Q+KRT  ATH K+TKD  GT VDHK
Sbjct: 627 SCFLGLQIKQRSEGMFMSQEKYAKNLVKKFGLDQSQYKRTPAATHAKITKDTVGTAVDHK 686

Query: 181 LYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF 240
           LYRS++GS LYL AS+ DIAYAV ICAR+QSDP TSHL  VKRI+KYVHGT+DFGILYS+
Sbjct: 687 LYRSMIGSHLYLKASRPDIAYAVEICARYQSDPCTSHLNAVKRIIKYVHGTTDFGILYSY 746

Query: 241 NTTSTLVGYCDAD 252
           +T S LVGYCDAD
Sbjct: 747 DTFSKLVGYCDAD 759

[Close]

BLAST of Cmc08g0226211 vs. ExPASy TrEMBL
Match: A0A5D3CS19 (Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G001080 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.8e-108
Identity = 197/253 (77.87%), Postives = 221/253 (87.35%), Query Frame = 0


Query: 1    MDVKSAFLNGYLNEEVFVAQPKGFVDSEFPHHVYKLNKALYGLKQAPRAWYERLTIYLGD 60
            M VKSAFLNGYLNEEV+V QPKGFVD EFP +VYKLNKALY LKQAP+AWYERLT+YLG+
Sbjct: 758  MHVKSAFLNGYLNEEVYVTQPKGFVDPEFPQYVYKLNKALYRLKQAPQAWYERLTMYLGE 817

Query: 61   KGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGEL 120
            + YSR  T KTLFINRTS+ LI+AQIYVDDIIFG FPK L+ NFINIMKSEFEMS+VGEL
Sbjct: 818  RVYSRGETDKTLFINRTSTNLIVAQIYVDDIIFGGFPKTLVDNFINIMKSEFEMSLVGEL 877

Query: 121  SCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTVVDHK 180
            SCFLGLQIKQRS  +FISQEKY KNLVKKFGLDQ QHKRT   TH K+TKD+ GT VDHK
Sbjct: 878  SCFLGLQIKQRSEGMFISQEKYAKNLVKKFGLDQSQHKRTPAVTHAKITKDMVGTEVDHK 937

Query: 181  LYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSF 240
            LYRS++GSLLYL  S+ DIAY VGICAR+QSD RTSHL  +KRI+KYVHGT+DFGILYS+
Sbjct: 938  LYRSMIGSLLYLTTSRPDIAYVVGICARYQSDSRTSHLNAIKRIIKYVHGTTDFGILYSY 997

Query: 241  NTTSTLVGYCDAD 252
            +T+S LVGY +AD
Sbjct: 998  DTSSELVGYYNAD 1010

[Close]

BLAST of Cmc08g0226211 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 89/256 (34.77%), Postives = 141/256 (55.08%), Query Frame = 0


Query: 1   MDVKSAFLNGYLNEEVFVAQPKGFV----DSEFPHHVYKLNKALYGLKQAPRAWYERLTI 60
           +D+ +AFLNG L+EE+++  P G+     DS  P+ V  L K++YGLKQA R W+ + ++
Sbjct: 193 LDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSV 252

Query: 61  YLGDKGYSRNGTSKTLFINRTSSELIIAQIYVDDIIFGVFPKALIGNFINIMKSEFEMSM 120
            L   G+ ++ +  T F+  T++  +   +YVDDII      A +    + +KS F++  
Sbjct: 253 TLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRD 312

Query: 121 VGELSCFLGLQIKQRS--IFISQEKYVKNLVKKFGLDQCQHKRTSVATHVKVTKDINGTV 180
           +G L  FLGL+I + +  I I Q KY  +L+ + GL  C+     +   V  +    G  
Sbjct: 313 LGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDF 372

Query: 181 VDHKLYRSLVGSLLYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGI 240
           VD K YR L+G L+YL  ++LDI++AV   ++F   PR +H   V +IL Y+ GT   G+
Sbjct: 373 VDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGL 432

Query: 241 LYSFNTTSTLVGYCDA 251
            YS      L  + DA
Sbjct: 433 FYSSQAEMQLQVFSDA 448

[Close]

BLAST of Cmc08g0226211 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 89.0 bits (219), Expect = 6.0e-18
Identity = 54/169 (31.95%), Postives = 89/169 (52.66%), Query Frame = 0


Query: 86  IYVDDIIFGVFPKALIGNFINIMKSEFEMSMVGELSCFLGLQIKQR--SIFISQEKYVKN 145
           +YVDDI+       L+   I  + S F M  +G +  FLG+QIK     +F+SQ KY + 
Sbjct: 5   LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64

Query: 146 LVKKFGLDQCQHKRTSVATHVKVTKDIN-GTVVDHKLYRSLVGSLLYLMASKLDIAYAVG 205
           ++   G+  C  K  S    +K+   ++     D   +RS+VG+L YL  ++ DI+YAV 
Sbjct: 65  ILNNAGMLDC--KPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVN 124

Query: 206 ICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSFNTTSTLVGYCDAD 252
           I  +   +P  +   ++KR+L+YV GT   G+    N+   +  +CD+D
Sbjct: 125 IVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171

[Close]

BLAST of Cmc08g0226211 vs. TAIR 10
Match: ATMG00240.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 45.1 bits (105), Expect = 1.0e-04
Identity = 21/64 (32.81%), Postives = 36/64 (56.25%), Query Frame = 0


Query: 188 LYLMASKLDIAYAVGICARFQSDPRTSHLTVVKRILKYVHGTSDFGILYSFNTTSTLVGY 247
           +YL  ++ D+ +AV   ++F S  RT+ +  V ++L YV GT   G+ YS  +   L  +
Sbjct: 1   MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60

Query: 248 CDAD 252
            D+D
Sbjct: 61  ADSD 64

The following BLAST results are available for this feature:

BLAST of Cmc08g0226211 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29824.1	5.6e-135	97.61	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0035790.1	6.5e-123	97.84	putative gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
TYJ98295.1	6.7e-112	79.45	gag-pol polyprotein [Cucumis melo var. makuwa]	[more]
KAA0054623.1	6.9e-109	78.26	putative mitochondrial protein [Cucumis melo var. makuwa]	[more]
KAA0054435.1	5.9e-108	77.87	gag-pol polyprotein [Cucumis melo var. makuwa] >TYK14601.1 gag-pol polyprotein [...	[more]

BLAST of Cmc08g0226211 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.2e-40	35.97	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	1.2e-39	35.18	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	7.9e-39	36.12	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	1.6e-31	31.78	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P25600	3.3e-29	30.31	Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain AT...	[more]

BLAST of Cmc08g0226211 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E1T0	2.7e-135	97.61	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A5A7SXM5	3.1e-123	97.84	Putative gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sca...	[more]
A0A5D3BIP9	3.2e-112	79.45	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold232G...	[more]
A0A5A7UF87	3.4e-109	78.26	Putative mitochondrial protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3CS19	2.8e-108	77.87	Gag-pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold552G...	[more]

BLAST of Cmc08g0226211 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	1.3e-36	34.77	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00810.1	6.0e-18	31.95	DNA/RNA polymerases superfamily protein	[more]
ATMG00240.1	1.0e-04	32.81	Gag-Pol-related retrotransposon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 1..158 e-value: 5.5E-40 score: 137.5
None	No IPR available	PANTHER	PTHR11439:SF351	CYSTEINE-RICH RLK (RECEPTOR-LIKE PROTEIN KINASE) 8	coord: 1..158
None	No IPR available	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..158
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 1..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0226211.1	Cmc08g0226211.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding