Cmc08g0225811 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0225811
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Reverse transcriptase
Location	CMiso1.1chr08: 17143262 .. 17144932 (+)
RNA-Seq Expression	Cmc08g0225811
Synteny	Cmc08g0225811

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGACTTTGATGTAATTCTGGGTATGGATTGGTTGGCCGCTAACCATGCCAGCATAGATTGTTCCCATAAGGAGGTAGCATTTAATCCTCCCTCGATGGTCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCCAGCAAACTGCTCAGTCAAGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTTGATGTATCCTCGTCATCAGAACCAGTGGTAAGGGACTATCCGGATGTCTTTCTTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATTCAGAGCCCCGTACAGAATGGCCCCAGTAGAGTTGAAGGAACTGAAAGTGCAGTTACAGGAATTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCAATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACTGAAGACGGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGATTGACGAATGCTCTGGCAGTGTTTATGAACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGGCACTTTTGTGATCGTGTTTATTGATGACATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAACATTTACGTATGGTTTTGCAAACCTTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTAAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTTTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGTAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTAGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAAGCAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAATCTTAAACAGAAGCTAGTTTCTGCACCAGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGCTTGGGTTGTGTATTGATGCAGCAAGGCAAGGTAGTCGCTTATTCTTCTCGTCAGTTGAAGAGTCACGAGCAGAATTACCCCACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTCAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATTTTCACGGATCATAAGAGCTTGAAATATTTCTTTACTCAAAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCTAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTTCAGTAG

mRNA sequence

ATGCTCGACTTTGATGTAATTCTGGGTATGGATTGGTTGGCCGCTAACCATGCCAGCATAGATTGTTCCCATAAGGAGGTAGCATTTAATCCTCCCTCGATGGTCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCCAGCAAACTGCTCAGTCAAGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTTGATGTATCCTCGTCATCAGAACCAGTGGTAAGGGACTATCCGGATGTCTTTCTTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATTCAGAGCCCCGTACAGAATGGCCCCAGTAGAGTTGAAGGAACTGAAAGTGCAGTTACAGGAATTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCAATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACTGAAGACGGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGATTGACGAATGCTCTGGCAGTGTTTATGAACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGGCACTTTTGTGATCGTGTTTATTGATGACATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAACATTTACGTATGGTTTTGCAAACCTTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTAAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTTTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGTAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTAGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAAGCAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAATCTTAAACAGAAGCTAGTTTCTGCACCAGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGCTTGGGTTGTGTATTGATGCAGCAAGGCAAGGTAGTCGCTTATTCTTCTCGTCAGTTGAAGAGTCACGAGCAGAATTACCCCACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTCAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATTTTCACGGATCATAAGAGCTTGAAATATTTCTTTACTCAAAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCTAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTTCAGTAG

Coding sequence (CDS)

ATGCTCGACTTTGATGTAATTCTGGGTATGGATTGGTTGGCCGCTAACCATGCCAGCATAGATTGTTCCCATAAGGAGGTAGCATTTAATCCTCCCTCGATGGTCAGTTTTAAATTTAAGGGAGAAGGGTCAAGGTCGTTACCTCAGGTAATCTCAGCCATGAGGGCCAGCAAACTGCTCAGTCAAGGTACTTGGAGTATCTTAGCGAGCGTGGTGGATACTAGAGAGGTTGATGTATCCTCGTCATCAGAACCAGTGGTAAGGGACTATCCGGATGTCTTTCTTGAAGAACTTCCAGGGTTACCTCCTCACAGAGAGGTTGAGTTTGCCATAGAGTTGGAGCCGGGCACGGTTCCTATATTCAGAGCCCCGTACAGAATGGCCCCAGTAGAGTTGAAGGAACTGAAAGTGCAGTTACAGGAATTGCTTGATAAGGGCTTCATTCGACCGAGTGTGTCACCTTGGGGTGCGCCAGTTTTATTTGTTAAGAAGAAGGATGGATCAATGCGCCTATGCATTGACTATAGGGAGTTGAACAAGGTAACCGTTAAGAACAGATATCCCTTGCCCAGGATCGACGACCTGTTTGACCAGTTACAGGGAGCTACAGTGTTCTCTAAGATTGATCTTCGGTCGGGATATCATCAGCTGAGGATTAAGGATGGTGATGTACTGAAGACGGCCTTTCGTTCCAGATACGGACACTATGAGTTTATTGTGATGTCTTTTGGATTGACGAATGCTCTGGCAGTGTTTATGAACTTGATGAACAGAGTGTTTAGGGAGTTCCTAGGCACTTTTGTGATCGTGTTTATTGATGACATCTTGATATATTCCAAGACGGAGGCCGAGCATGAGGAACATTTACGTATGGTTTTGCAAACCTTTCGGGATAATAAATTGTATGCAAAGTTCTCGAAATGCGAGTTTTGGCTAAAGCAGGTGTCCTTTCTAGGCCATGTGGTTTTTAAGGCTGGAGTTTCTGTGGATCCAGCTAAGATAGAGGTAGTCACCAGTTGGCCCCGACCTTCCACAGTCAGTGAGGTTCGTAGTTTTCTAGGTTTAGCAGGTTATTATCGACGGTTTGTGGAGAACTTTTCCCGTATAGCTACTCCTCTTACTCAGTTGACCAGGAAAGCAGCTCCTTTTGTTTGGAGCAAGGCATGTGAGGACAGTTTCCAGAATCTTAAACAGAAGCTAGTTTCTGCACCAGTTCTTACTGTACCTGATGGTTCTGGCAGTTTTGTGATTTATAGTGATGCTTCCAAGAAGGGCTTGGGTTGTGTATTGATGCAGCAAGGCAAGGTAGTCGCTTATTCTTCTCGTCAGTTGAAGAGTCACGAGCAGAATTACCCCACACATGATTTAGAGTTGGCAGCAGTGGTTTTTGCATTCAAGATATGGAGGCATTACTTGTATGGTGAAAAGATACAGATTTTCACGGATCATAAGAGCTTGAAATATTTCTTTACTCAAAAGGAATTGAATATGAGACAACGAAGATGGCTTGAGTTAGTGAAGGATTACGATTGTGAGATACTGTATCATCTAGGCAAGGCAAATGTGGTAGCTGATGCTCTTAGTAGAAAGGTATCACATTCAGCAGCACTTATTACCCGACAGGCCCCATTGCATCGAGATCTTGAGAGGGCTGAGATTGCAGTTCAGTAG

Protein sequence

MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLLSQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPIFRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIVMSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSDASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITRQAPLHRDLERAEIAVQ

Homology

[Close]

BLAST of Cmc08g0225811 vs. NCBI nr
Match: KAA0067821.1 (reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 1064.3 bits (2751), Expect = 3.6e-307
Identity = 529/532 (99.44%), Postives = 531/532 (99.81%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
           MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL
Sbjct: 270 MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 329

Query: 61  SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 330 SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 389

Query: 121 FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 390 FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 449

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
           VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV
Sbjct: 450 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 509

Query: 241 MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
           MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK
Sbjct: 510 MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 569

Query: 301 LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIE VTSWPRPSTVSEVRSFLGLAGYYR
Sbjct: 570 LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYR 629

Query: 361 RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
           RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD
Sbjct: 630 RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 689

Query: 421 ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
           ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF
Sbjct: 690 ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 749

Query: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVS 533
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRK++
Sbjct: 750 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKLA 801

[Close]

BLAST of Cmc08g0225811 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1050.0 bits (2714), Expect = 7.0e-303
Identity = 527/555 (94.95%), Postives = 532/555 (95.86%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
            MLDFDVILGMDWLAANHASIDCS KEV FNPPSM SFKFKG GS+SLPQVISA+RASKLL
Sbjct: 708  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 61   SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTW ILASVVDTRE DVS SSEPVVRDYPDVF EELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 121  FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
             RAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 828  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 887

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIV
Sbjct: 888  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 947

Query: 241  MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
            MSFGLTNA AVFM+LMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 301  LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVV KAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 361  RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRK APFVWSKACEDSFQ LKQKLV+APVLTVPDGSGSFVIYSD
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 421  ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAY+SRQLKSHEQNYPTHDLELAAVVFA KIWRHYLYGEKIQIF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 541  QAPLHRDLERAEIAV 556
            QAPLHRDLERAEIAV
Sbjct: 1248 QAPLHRDLERAEIAV 1262

[Close]

BLAST of Cmc08g0225811 vs. NCBI nr
Match: KAA0048687.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1049.3 bits (2712), Expect = 1.2e-302
Identity = 527/555 (94.95%), Postives = 532/555 (95.86%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
            MLDFDVILGMDWLAA+HASIDCS KEV FNPPS  SFKFKG GSRSLPQVISA+RASKLL
Sbjct: 454  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 513

Query: 61   SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTW ILASVVDTRE DVS SSEPVVRDYPDVF EELPGLPPHREVEFAIELEPGTVPI
Sbjct: 514  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 573

Query: 121  FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
             RAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 574  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 633

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIV
Sbjct: 634  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 693

Query: 241  MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
            MSFGLTNA AVFM+LMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 301  LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVV KAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYR
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 361  RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLV+APVLTVPDGSGSFVIYSD
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 421  ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAY+SRQLKSHEQNYPTHDLELAAVVFA KIWRHYLYGEKIQIF
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 541  QAPLHRDLERAEIAV 556
            QAPLHRDLERAEIAV
Sbjct: 994  QAPLHRDLERAEIAV 1008

[Close]

BLAST of Cmc08g0225811 vs. NCBI nr
Match: KAA0062719.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1049.3 bits (2712), Expect = 1.2e-302
Identity = 527/555 (94.95%), Postives = 533/555 (96.04%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
           MLDFDVIL  DWLAANHASIDCS KEV FNPPS  SFKFKGEGSRSLPQVISA+RASKLL
Sbjct: 1   MLDFDVILCKDWLAANHASIDCSRKEVTFNPPSRASFKFKGEGSRSLPQVISAIRASKLL 60

Query: 61  SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTW ILASVVDTR+ DVS SSEPVVRDYPDVF EELPGLPPHREVEFAIELEPGTVPI
Sbjct: 61  SQGTWGILASVVDTRKADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120

Query: 121 FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            RAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 121 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
           VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIV
Sbjct: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240

Query: 241 MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
           MSFGLTNALAVFM+LMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNK
Sbjct: 241 MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300

Query: 301 LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLKQVSFLGHVV KAGVSVDPAKIE VTSW RPSTVSEVRSFLGLAGYYR
Sbjct: 301 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYR 360

Query: 361 RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
           RFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLV+APVLTVPDGSGSFVIYSD
Sbjct: 361 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420

Query: 421 ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
           ASKKGLGCVL+QQGKVVAY+SRQLKSHEQNYPTHDLELAAVVFA KIWRHYLYGEKIQIF
Sbjct: 421 ASKKGLGCVLIQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480

Query: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 540
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITR
Sbjct: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540

Query: 541 QAPLHRDLERAEIAV 556
           QAPLHRDLERAEIAV
Sbjct: 541 QAPLHRDLERAEIAV 555

[Close]

BLAST of Cmc08g0225811 vs. NCBI nr
Match: KAA0057668.1 (pol protein [Cucumis melo var. makuwa])

HSP 1 Score: 1048.5 bits (2710), Expect = 2.0e-302
Identity = 525/555 (94.59%), Postives = 530/555 (95.50%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
           MLDFDVILGMDWLAANHASIDCS KEV FNPPS  SFKFKGEGSRSLPQVISA+RASKLL
Sbjct: 198 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSRASFKFKGEGSRSLPQVISAIRASKLL 257

Query: 61  SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTW ILASVVDTRE DVS SSEPVVRDYPDVF EELPGLPPHREVEFAIELEPGTVPI
Sbjct: 258 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 317

Query: 121 FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            RAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLF KKKDGSMRLCIDYRELNK
Sbjct: 318 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFAKKKDGSMRLCIDYRELNK 377

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
           VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIV
Sbjct: 378 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 437

Query: 241 MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
           MSFGLTNA AVFM+LMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNK
Sbjct: 438 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 497

Query: 301 LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLK VSFLGHVV KAGVSVDPAKIE  T W RPSTVSEVRSFLGLAGYYR
Sbjct: 498 LYAKFSKCEFWLKHVSFLGHVVSKAGVSVDPAKIEADTGWTRPSTVSEVRSFLGLAGYYR 557

Query: 361 RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
           RFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLV+AP+LTVPDGSGSFVIYSD
Sbjct: 558 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 617

Query: 421 ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
           ASKKGLGCVLMQQGKVVAY+SRQLKSHEQNYPTHDLELAAVVFA KIWRHYLYGEKIQIF
Sbjct: 618 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 677

Query: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 540
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR
Sbjct: 678 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 737

Query: 541 QAPLHRDLERAEIAV 556
           Q PLHRDLERAEIAV
Sbjct: 738 QTPLHRDLERAEIAV 752

[Close]

BLAST of Cmc08g0225811 vs. ExPASy Swiss-Prot
Match: P20825 (Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.0e-86
Identity = 162/417 (38.85%), Postives = 247/417 (59.23%), Query Frame = 0


Query: 119 PIFRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKD-----GSMRLCI 178
           PI+   Y +A     E++ Q+QE+L++G IR S SP+ +P   V KK         R+ I
Sbjct: 206 PIYSKQYPLAQTHEIEVENQVQEMLNQGLIRESNSPYNSPTWVVPKKPDASGANKYRVVI 265

Query: 179 DYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRY 238
           DYR+LN++T+ +RYP+P +D++  +L     F+ IDL  G+HQ+ + +  + KTAF ++ 
Sbjct: 266 DYRKLNEITIPDRYPIPNMDEILGKLGKCQYFTTIDLAKGFHQIEMDEESISKTAFSTKS 325

Query: 239 GHYEFIVMSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVL 298
           GHYE++ M FGL NA A F   MN + R  L    +V++DDI+I+S +  EH   +++V 
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNILRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQLVF 385

Query: 299 QTFRDNKLYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFL 358
               D  L  +  KCEF  K+ +FLGH+V   G+  +P K++ + S+P P+   E+R+FL
Sbjct: 386 TKLADANLKLQLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFL 445

Query: 359 GLAGYYRRFVENFSRIATPLTQLTRKAAPFVWSK-ACEDSFQNLKQKLVSAPVLTVPDGS 418
           GL GYYR+F+ N++ IA P+T   +K       K    ++F+ LK  ++  P+L +PD  
Sbjct: 446 GLTGYYRKFIPNYADIAKPMTSCLKKRTKIDTQKLEYIEAFEKLKALIIRDPILQLPDFE 505

Query: 419 GSFVIYSDASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYL 478
             FV+ +DAS   LG VL Q G  +++ SR L  HE NY   + EL A+V+A K +RHYL
Sbjct: 506 KKFVLTTDASNLALGAVLSQNGHPISFISRTLNDHELNYSAIEKELLAIVWATKTFRHYL 565

Query: 479 YGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSR 530
            G +  I +DH+ L++    KE   +  RW   + +Y  +I Y  GK N VADALSR
Sbjct: 566 LGRQFLIASDHQPLRWLHNLKEPGAKLERWRVRLSEYQFKIDYIKGKENSVADALSR 622

[Close]

BLAST of Cmc08g0225811 vs. ExPASy Swiss-Prot
Match: P04323 (Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 8.5e-86
Identity = 162/403 (40.20%), Postives = 248/403 (61.54%), Query Frame = 0


Query: 133 KELKVQLQELLDKGFIRPSVSPWGAPVLFV-KKKDGS----MRLCIDYRELNKVTVKNRY 192
           +E++ Q+Q++L++G IR S SP+ +P+  V KK+D S     R+ IDYR+LN++TV +R+
Sbjct: 221 QEVESQIQDMLNQGIIRTSNSPYNSPIWVVPKKQDASGKQKFRIVIDYRKLNEITVGDRH 280

Query: 193 PLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIVMSFGLTN 252
           P+P +D++  +L     F+ IDL  G+HQ+ +    V KTAF +++GHYE++ M FGL N
Sbjct: 281 PIPNMDEILGKLGRCNYFTTIDLAKGFHQIEMDPESVSKTAFSTKHGHYEYLRMPFGLKN 340

Query: 253 ALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLYAKFSK 312
           A A F   MN + R  L    +V++DDI+++S +  EH + L +V +      L  +  K
Sbjct: 341 APATFQRCMNDILRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGLVFEKLAKANLKLQLDK 400

Query: 313 CEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYRRFVENFS 372
           CEF  ++ +FLGHV+   G+  +P KIE +  +P P+   E+++FLGL GYYR+F+ NF+
Sbjct: 401 CEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFIPNFA 460

Query: 373 RIATPLTQLTRKAAPFVWSKACEDS-FQNLKQKLVSAPVLTVPDGSGSFVIYSDASKKGL 432
            IA P+T+  +K      +    DS F+ LK  +   P+L VPD +  F + +DAS   L
Sbjct: 461 DIAKPMTKCLKKNMKIDTTNPEYDSAFKKLKYLISEDPILKVPDFTKKFTLTTDASDVAL 520

Query: 433 GCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIFTDHKSL 492
           G VL Q G  ++Y SR L  HE NY T + EL A+V+A K +RHYL G   +I +DH+ L
Sbjct: 521 GAVLSQDGHPLSYISRTLNEHEINYSTIEKELLAIVWATKTFRHYLLGRHFEISSDHQPL 580

Query: 493 KYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSR 530
            + +  K+ N +  RW   + ++D +I Y  GK N VADALSR
Sbjct: 581 SWLYRMKDPNSKLTRWRVKLSEFDFDIKYIKGKENCVADALSR 623

[Close]

BLAST of Cmc08g0225811 vs. ExPASy Swiss-Prot
Match: Q8I7P9 (Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 3.4e-82
Identity = 167/466 (35.84%), Postives = 268/466 (57.51%), Query Frame = 0


Query: 89  DYPDVFLEELPGLPPHREVEFAIELEPGT---VPIFRAPYRMAPVELK-ELKVQLQELLD 148
           ++P +F   L G+     VE A++ E  T    PI+   Y   PV ++ E++ Q+ ELL 
Sbjct: 94  EFPRIFEPPLSGM----SVETAVKAEIRTNTQDPIYAKSYPY-PVNMRGEVERQIDELLQ 153

Query: 149 KGFIRPSVSPWGAPVLFVKKK-----DGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQL 208
            G IRPS SP+ +P+  V KK     +   R+ +D++ LN VT+ + YP+P I+     L
Sbjct: 154 DGIIRPSNSPYNSPIWIVPKKPKPNGEKQYRMVVDFKRLNTVTIPDTYPIPDINATLASL 213

Query: 209 QGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIVMSFGLTNALAVFMNLMNRV 268
             A  F+ +DL SG+HQ+ +K+ D+ KTAF +  G YEF+ + FGL NA A+F  +++ +
Sbjct: 214 GNAKYFTTLDLTSGFHQIHMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDI 273

Query: 269 FREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNKLYAKFSKCEFWLKQVSFLG 328
            RE +G    V+IDDI+++S+    H ++LR+VL +     L     K  F   QV FLG
Sbjct: 274 LREHIGKVCYVYIDDIIVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLDTQVEFLG 333

Query: 329 HVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTR- 388
           ++V   G+  DP K+  ++  P P++V E++ FLG+  YYR+F+++++++A PLT LTR 
Sbjct: 334 YIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKVAKPLTNLTRG 393

Query: 389 ----------KAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSDASKKGLGC 448
                        P    +    SF +LK  L S+ +L  P  +  F + +DAS   +G 
Sbjct: 394 LYANIKSSQSSKVPITLDETALQSFNDLKSILCSSEILAFPCFTKPFHLTTDASNWAIGA 453

Query: 449 VLMQ----QGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGE-KIQIFTDH 508
           VL Q    + + +AY SR L   E+NY T + E+ A++++    R YLYG   I+++TDH
Sbjct: 454 VLSQDDQGRDRPIAYISRSLNKTEENYATIEKEMLAIIWSLDNLRAYLYGAGTIKVYTDH 513

Query: 509 KSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSR 530
           + L +    +  N + +RW   +++Y+CE++Y  GK+NVVADALSR
Sbjct: 514 QPLTFALGNRNFNAKLKRWKARIEEYNCELIYKPGKSNVVADALSR 554

[Close]

BLAST of Cmc08g0225811 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-80
Identity = 177/494 (35.83%), Postives = 273/494 (55.26%), Query Frame = 0


Query: 56   ASKLLSQGTWSILASVVDTREVDVSSSSEP---------VVRDYPDVFLEELPGLPP--- 115
            AS L   G +S + S + + E + +  S           + + Y ++   +LP  P    
Sbjct: 521  ASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLPPRPADIN 580

Query: 116  HREVEFAIELEPGTVPIFRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 175
            +  V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V 
Sbjct: 581  NIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVP 640

Query: 176  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGD 235
            KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ ++  D
Sbjct: 641  KKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKD 700

Query: 236  VLKTAFRSRYGHYEFIVMSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEA 295
              KTAF +  G YE+ VM FGL NA + F   M   FR+    FV V++DDILI+S++  
Sbjct: 701  RYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPE 760

Query: 296  EHEEHLRMVLQTFRDNKLYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRP 355
            EH +HL  VL+  ++  L  K  KC+F  ++  FLG+ +    ++    K   +  +P P
Sbjct: 761  EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 820

Query: 356  STVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSA 415
             TV + + FLG+  YYRRF+ N S+IA P+       +   W++  + +   LK  L ++
Sbjct: 821  KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIDKLKDALCNS 880

Query: 416  PVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYSSRQLKSHEQNYPTHDLE 475
            PVL   +   ++ + +DASK G+G VL +         VV Y S+ L+S ++NYP  +LE
Sbjct: 881  PVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELE 940

Query: 476  LAAVVFAFKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHL 532
            L  ++ A   +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD  + Y  
Sbjct: 941  LLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLA 1000

[Close]

BLAST of Cmc08g0225811 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2)

HSP 1 Score: 302.4 bits (773), Expect = 1.1e-80
Identity = 176/494 (35.63%), Postives = 274/494 (55.47%), Query Frame = 0


Query: 56   ASKLLSQGTWSILASVVDTREVDVSSSSEP---------VVRDYPDVFLEELPGLPP--- 115
            AS L   G +S + S + + E + +  S           + + Y ++   +LP  P    
Sbjct: 547  ASILEEDGKYSNVVSTIQSVEPNATDHSNKDTFCTLPVWLQQKYREIIRNDLPPRPADIN 606

Query: 116  HREVEFAIELEPGTVPIFRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVK 175
            +  V+  IE++PG       PY +     +E+   +Q+LLD  FI PS SP  +PV+ V 
Sbjct: 607  NIPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVP 666

Query: 176  KKDGSMRLCIDYRELNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGD 235
            KKDG+ RLC+DYR LNK T+ + +PLPRID+L  ++  A +F+ +DL SGYHQ+ ++  D
Sbjct: 667  KKDGTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNAQIFTTLDLHSGYHQIPMEPKD 726

Query: 236  VLKTAFRSRYGHYEFIVMSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEA 295
              KTAF +  G YE+ VM FGL NA + F   M   FR+    FV V++DDILI+S++  
Sbjct: 727  RYKTAFVTPSGKYEYTVMPFGLVNAPSTFARYMADTFRDL--RFVNVYLDDILIFSESPE 786

Query: 296  EHEEHLRMVLQTFRDNKLYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRP 355
            EH +HL  VL+  ++  L  K  KC+F  ++  FLG+ +    ++    K   +  +P P
Sbjct: 787  EHWKHLDTVLERLKNENLIVKKKKCKFASEETEFLGYSIGIQKIAPLQHKCAAIRDFPTP 846

Query: 356  STVSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSA 415
             TV + + FLG+  YYRRF+ N S+IA P+       +   W++  + + + LK  L ++
Sbjct: 847  KTVKQAQRFLGMINYYRRFIPNCSKIAQPIQLFICDKSQ--WTEKQDKAIEKLKAALCNS 906

Query: 416  PVLTVPDGSGSFVIYSDASKKGLGCVLMQQGK------VVAYSSRQLKSHEQNYPTHDLE 475
            PVL   +   ++ + +DASK G+G VL +         VV Y S+ L+S ++NYP  +LE
Sbjct: 907  PVLVPFNNKANYRLTTDASKDGIGAVLEEVDNKNKLVGVVGYFSKSLESAQKNYPAGELE 966

Query: 476  LAAVVFAFKIWRHYLYGEKIQIFTDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHL 532
            L  ++ A   +R+ L+G+   + TDH SL     + E   R +RWL+ +  YD  + Y  
Sbjct: 967  LLGIIKALHHFRYMLHGKHFTLRTDHISLLSLQNKNEPARRVQRWLDDLATYDFTLEYLA 1026

[Close]

BLAST of Cmc08g0225811 vs. ExPASy TrEMBL
Match: A0A5A7VQE0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2484G00260 PE=4 SV=1)

HSP 1 Score: 1064.3 bits (2751), Expect = 1.7e-307
Identity = 529/532 (99.44%), Postives = 531/532 (99.81%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
           MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL
Sbjct: 270 MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 329

Query: 61  SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI
Sbjct: 330 SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 389

Query: 121 FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
           FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 390 FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 449

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
           VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV
Sbjct: 450 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 509

Query: 241 MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
           MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK
Sbjct: 510 MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 569

Query: 301 LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIE VTSWPRPSTVSEVRSFLGLAGYYR
Sbjct: 570 LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEAVTSWPRPSTVSEVRSFLGLAGYYR 629

Query: 361 RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
           RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD
Sbjct: 630 RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 689

Query: 421 ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
           ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF
Sbjct: 690 ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 749

Query: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVS 533
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRK++
Sbjct: 750 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKLA 801

[Close]

BLAST of Cmc08g0225811 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1)

HSP 1 Score: 1050.0 bits (2714), Expect = 3.4e-303
Identity = 527/555 (94.95%), Postives = 532/555 (95.86%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
            MLDFDVILGMDWLAANHASIDCS KEV FNPPSM SFKFKG GS+SLPQVISA+RASKLL
Sbjct: 708  MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSMASFKFKGGGSKSLPQVISAIRASKLL 767

Query: 61   SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTW ILASVVDTRE DVS SSEPVVRDYPDVF EELPGLPPHREVEFAIELEPGTVPI
Sbjct: 768  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 827

Query: 121  FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
             RAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 828  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 887

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIV
Sbjct: 888  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 947

Query: 241  MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
            MSFGLTNA AVFM+LMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNK
Sbjct: 948  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 1007

Query: 301  LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVV KAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYR
Sbjct: 1008 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 1067

Query: 361  RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRK APFVWSKACEDSFQ LKQKLV+APVLTVPDGSGSFVIYSD
Sbjct: 1068 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGSFVIYSD 1127

Query: 421  ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAY+SRQLKSHEQNYPTHDLELAAVVFA KIWRHYLYGEKIQIF
Sbjct: 1128 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 1187

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITR
Sbjct: 1188 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 1247

Query: 541  QAPLHRDLERAEIAV 556
            QAPLHRDLERAEIAV
Sbjct: 1248 QAPLHRDLERAEIAV 1262

[Close]

BLAST of Cmc08g0225811 vs. ExPASy TrEMBL
Match: A0A5A7VAL8 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00460 PE=4 SV=1)

HSP 1 Score: 1049.3 bits (2712), Expect = 5.8e-303
Identity = 527/555 (94.95%), Postives = 533/555 (96.04%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
           MLDFDVIL  DWLAANHASIDCS KEV FNPPS  SFKFKGEGSRSLPQVISA+RASKLL
Sbjct: 1   MLDFDVILCKDWLAANHASIDCSRKEVTFNPPSRASFKFKGEGSRSLPQVISAIRASKLL 60

Query: 61  SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTW ILASVVDTR+ DVS SSEPVVRDYPDVF EELPGLPPHREVEFAIELEPGTVPI
Sbjct: 61  SQGTWGILASVVDTRKADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 120

Query: 121 FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            RAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 121 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
           VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIV
Sbjct: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 240

Query: 241 MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
           MSFGLTNALAVFM+LMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNK
Sbjct: 241 MSFGLTNALAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 300

Query: 301 LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLKQVSFLGHVV KAGVSVDPAKIE VTSW RPSTVSEVRSFLGLAGYYR
Sbjct: 301 LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTSWTRPSTVSEVRSFLGLAGYYR 360

Query: 361 RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
           RFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLV+APVLTVPDGSGSFVIYSD
Sbjct: 361 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 420

Query: 421 ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
           ASKKGLGCVL+QQGKVVAY+SRQLKSHEQNYPTHDLELAAVVFA KIWRHYLYGEKIQIF
Sbjct: 421 ASKKGLGCVLIQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 480

Query: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 540
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITR
Sbjct: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 540

Query: 541 QAPLHRDLERAEIAV 556
           QAPLHRDLERAEIAV
Sbjct: 541 QAPLHRDLERAEIAV 555

[Close]

BLAST of Cmc08g0225811 vs. ExPASy TrEMBL
Match: A0A5A7U330 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4358G00040 PE=4 SV=1)

HSP 1 Score: 1049.3 bits (2712), Expect = 5.8e-303
Identity = 527/555 (94.95%), Postives = 532/555 (95.86%), Query Frame = 0


Query: 1    MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
            MLDFDVILGMDWLAA+HASIDCS KEV FNPPS  SFKFKG GSRSLPQVISA+RASKLL
Sbjct: 454  MLDFDVILGMDWLAAHHASIDCSRKEVTFNPPSRASFKFKGGGSRSLPQVISAIRASKLL 513

Query: 61   SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
            SQGTW ILASVVDTRE DVS SSEPVVRDYPDVF EELPGLPPHREVEFAIELEPGTVPI
Sbjct: 514  SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 573

Query: 121  FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
             RAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK
Sbjct: 574  SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 633

Query: 181  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
            VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIV
Sbjct: 634  VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 693

Query: 241  MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
            MSFGLTNA AVFM+LMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNK
Sbjct: 694  MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 753

Query: 301  LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
            LYAKFSKCEFWLKQVSFLGHVV KAGVSVDPAKIE VT W RPSTVSEVRSFLGLAGYYR
Sbjct: 754  LYAKFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYR 813

Query: 361  RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
            RFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLV+APVLTVPDGSGSFVIYSD
Sbjct: 814  RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPVLTVPDGSGSFVIYSD 873

Query: 421  ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
            ASKKGLGCVLMQQGKVVAY+SRQLKSHEQNYPTHDLELAAVVFA KIWRHYLYGEKIQIF
Sbjct: 874  ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 933

Query: 481  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 540
            TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYH GKANVVADALSRKVSHSAALITR
Sbjct: 934  TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITR 993

Query: 541  QAPLHRDLERAEIAV 556
            QAPLHRDLERAEIAV
Sbjct: 994  QAPLHRDLERAEIAV 1008

[Close]

BLAST of Cmc08g0225811 vs. ExPASy TrEMBL
Match: A0A5A7URA1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00120 PE=4 SV=1)

HSP 1 Score: 1048.5 bits (2710), Expect = 9.8e-303
Identity = 525/555 (94.59%), Postives = 530/555 (95.50%), Query Frame = 0


Query: 1   MLDFDVILGMDWLAANHASIDCSHKEVAFNPPSMVSFKFKGEGSRSLPQVISAMRASKLL 60
           MLDFDVILGMDWLAANHASIDCS KEV FNPPS  SFKFKGEGSRSLPQVISA+RASKLL
Sbjct: 198 MLDFDVILGMDWLAANHASIDCSRKEVTFNPPSRASFKFKGEGSRSLPQVISAIRASKLL 257

Query: 61  SQGTWSILASVVDTREVDVSSSSEPVVRDYPDVFLEELPGLPPHREVEFAIELEPGTVPI 120
           SQGTW ILASVVDTRE DVS SSEPVVRDYPDVF EELPGLPPHREVEFAIELEPGTVPI
Sbjct: 258 SQGTWGILASVVDTREADVSLSSEPVVRDYPDVFPEELPGLPPHREVEFAIELEPGTVPI 317

Query: 121 FRAPYRMAPVELKELKVQLQELLDKGFIRPSVSPWGAPVLFVKKKDGSMRLCIDYRELNK 180
            RAPYRMAP ELKELKVQLQELLDKGFIRPSVSPWGAPVLF KKKDGSMRLCIDYRELNK
Sbjct: 318 SRAPYRMAPAELKELKVQLQELLDKGFIRPSVSPWGAPVLFAKKKDGSMRLCIDYRELNK 377

Query: 181 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDGDVLKTAFRSRYGHYEFIV 240
           VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKD DV KTAFRSRYGHYEFIV
Sbjct: 378 VTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDEDVPKTAFRSRYGHYEFIV 437

Query: 241 MSFGLTNALAVFMNLMNRVFREFLGTFVIVFIDDILIYSKTEAEHEEHLRMVLQTFRDNK 300
           MSFGLTNA AVFM+LMNRVFREFL TFVIVFIDDILIYSKTEAEHEEHLRMVLQT RDNK
Sbjct: 438 MSFGLTNAPAVFMDLMNRVFREFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNK 497

Query: 301 LYAKFSKCEFWLKQVSFLGHVVFKAGVSVDPAKIEVVTSWPRPSTVSEVRSFLGLAGYYR 360
           LYAKFSKCEFWLK VSFLGHVV KAGVSVDPAKIE  T W RPSTVSEVRSFLGLAGYYR
Sbjct: 498 LYAKFSKCEFWLKHVSFLGHVVSKAGVSVDPAKIEADTGWTRPSTVSEVRSFLGLAGYYR 557

Query: 361 RFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPVLTVPDGSGSFVIYSD 420
           RFVENFSRIATPLTQLTRK APFVWSKACEDSFQNLKQKLV+AP+LTVPDGSGSFVIYSD
Sbjct: 558 RFVENFSRIATPLTQLTRKGAPFVWSKACEDSFQNLKQKLVTAPILTVPDGSGSFVIYSD 617

Query: 421 ASKKGLGCVLMQQGKVVAYSSRQLKSHEQNYPTHDLELAAVVFAFKIWRHYLYGEKIQIF 480
           ASKKGLGCVLMQQGKVVAY+SRQLKSHEQNYPTHDLELAAVVFA KIWRHYLYGEKIQIF
Sbjct: 618 ASKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIF 677

Query: 481 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 540
           TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR
Sbjct: 678 TDHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHLGKANVVADALSRKVSHSAALITR 737

Query: 541 QAPLHRDLERAEIAV 556
           Q PLHRDLERAEIAV
Sbjct: 738 QTPLHRDLERAEIAV 752

[Close]

BLAST of Cmc08g0225811 vs. TAIR 10
Match: ATMG00860.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 117.9 bits (294), Expect = 2.7e-26
Identity = 57/131 (43.51%), Postives = 82/131 (62.60%), Query Frame = 0


Query: 288 HLRMVLQTFRDNKLYAKFSKCEFWLKQVSFLG--HVVFKAGVSVDPAKIEVVTSWPRPST 347
           HL MVLQ +  ++ YA   KC F   Q+++LG  H++   GVS DPAK+E +  WP P  
Sbjct: 3   HLGMVLQIWEQHQFYANRKKCAFGQPQIAYLGHRHIISGEGVSADPAKLEAMVGWPEPKN 62

Query: 348 VSEVRSFLGLAGYYRRFVENFSRIATPLTQLTRKAAPFVWSKACEDSFQNLKQKLVSAPV 407
            +E+R FLGL GYYRRFV+N+ +I  PLT+L +K +   W++    +F+ LK  + + PV
Sbjct: 63  TTELRGFLGLTGYYRRFVKNYGKIVRPLTELLKKNS-LKWTEMAALAFKALKGAVTTLPV 122

Query: 408 LTVPDGSGSFV 417
           L +PD    FV
Sbjct: 123 LALPDLKLPFV 132

The following BLAST results are available for this feature:

BLAST of Cmc08g0225811 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067821.1	3.6e-307	99.44	reverse transcriptase [Cucumis melo var. makuwa]	[more]
TYK01613.1	7.0e-303	94.95	pol protein [Cucumis melo var. makuwa]	[more]
KAA0048687.1	1.2e-302	94.95	pol protein [Cucumis melo var. makuwa]	[more]
KAA0062719.1	1.2e-302	94.95	pol protein [Cucumis melo var. makuwa]	[more]
KAA0057668.1	2.0e-302	94.59	pol protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0225811 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P20825	1.0e-86	38.85	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaste...	[more]
P04323	8.5e-86	40.20	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogast...	[more]
Q8I7P9	3.4e-82	35.84	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogast...	[more]
Q99315	1.1e-80	35.83	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q7LHG5	1.1e-80	35.63	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of Cmc08g0225811 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VQE0	1.7e-307	99.44	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24...	[more]
A0A5D3BPI1	3.4e-303	94.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45...	[more]
A0A5A7VAL8	5.8e-303	94.95	Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold382G00460 PE...	[more]
A0A5A7U330	5.8e-303	94.95	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43...	[more]
A0A5A7URA1	9.8e-303	94.59	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold12...	[more]

BLAST of Cmc08g0225811 vs. TAIR 10


Match Name	E-value	Identity	Description
ATMG00860.1	2.7e-26	43.51	DNA/RNA polymerases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 548..556
None	No IPR available	PFAM	PF08284	RVP_2	coord: 2..31 e-value: 3.7E-8 score: 33.2
None	No IPR available	GENE3D	3.10.10.10	HIV Type 1 Reverse Transcriptase, subunit A, domain 1	coord: 108..247 e-value: 1.5E-91 score: 307.4
None	No IPR available	PANTHER	PTHR24559	TRANSPOSON TY3-I GAG-POL POLYPROTEIN	coord: 1..535
None	No IPR available	PANTHER	PTHR24559:SF383	DNA/RNA POLYMERASES SUPERFAMILY PROTEIN	coord: 1..535
None	No IPR available	CDD	cd01647	RT_LTR	coord: 146..322 e-value: 6.27079E-96 score: 287.955
None	No IPR available	CDD	cd09274	RNase_HI_RT_Ty3	coord: 416..531 e-value: 5.86276E-57 score: 184.618
IPR000477	Reverse transcriptase domain	PFAM	PF00078	RVT_1	coord: 162..321 e-value: 9.7E-27 score: 93.9
IPR000477	Reverse transcriptase domain	PROSITE	PS50878	RT_POL	coord: 143..322 score: 9.736575
IPR041373	Reverse transcriptase, RNase H-like domain	PFAM	PF17917	RT_RNaseH	coord: 413..509 e-value: 5.1E-34 score: 116.7
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 332..422 e-value: 1.5E-31 score: 110.2
IPR043128	Reverse transcriptase/Diguanylate cyclase domain	GENE3D	3.30.70.270		coord: 187..322 e-value: 1.5E-91 score: 307.4
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 1..40 e-value: 1.6E-5 score: 26.7
IPR043502	DNA/RNA polymerase superfamily	SUPERFAMILY	56672	DNA/RNA polymerases	coord: 86..515

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0225811.1	Cmc08g0225811.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0016020	membrane
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0008270	zinc ion binding