Cmc08g0225171 (gene) Melon (Charmono) v1.1

Overview


Name	Cmc08g0225171
Type	gene
Organism	Cucumis melo L. var. cantalupensis cv. Charmono (Melon (Charmono) v1.1)
Description	Ty3/gypsy retrotransposon protein
Location	CMiso1.1chr08: 15992987 .. 15993580 (-)
RNA-Seq Expression	Cmc08g0225171
Synteny	Cmc08g0225171

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGACATTATGCGGTACTGTGAAGAGTGTGCGATCTGCCAGCGAAATAAGTCATCAGCATTATCTCCAGTAGGGCTACTGATGCCTTTGGAAATTCCAGACGCAATATGGAGTGATATCTCCATGGACTTCATTGAAGGTCTACCAAAATCCAAGGGATGGGATGTGATACTCGTGGTGGTGGATAGGCTGAGTAAATATGGTCATTTTCTGTTGCTGAAGCACCCTTTCACAGCCAAGATGGTGGCTGAAATGTTTGTAAAGGAAGTGGTCAGACTTCATGGGTACCCGAGGTCGATAGTGTCTGACAGGGACAAGGTATTCTTGAGCCATTTCTGGAAAGAACTCTTCCGTTTGGCAGGTACTAAGCTGAACCGGAGCTCTTCATATCACCCCCAATCGGATGGCCAGACTGAGGTGGTGAACAAGAGTGTTGAGACATATTTGAGGTGTTTTTGTGGGGAAAGACCGCACGAATGGAGCCAGTGGTTACATTGGGCAGAATACTGGTACAATACTACCTATCATAGTTCGATCGGAATTACTCCTTTCCAAGCTGTCTATGGACGCCTACCTCCTCCCTTGATTTAG

mRNA sequence

ATGAAGGACATTATGCGGTACTGTGAAGAGTGTGCGATCTGCCAGCGAAATAAGTCATCAGCATTATCTCCAGTAGGGCTACTGATGCCTTTGGAAATTCCAGACGCAATATGGAGTGATATCTCCATGGACTTCATTGAAGGTCTACCAAAATCCAAGGGATGGGATGTGATACTCGTGGTGGTGGATAGGCTGAGTAAATATGGTCATTTTCTGTTGCTGAAGCACCCTTTCACAGCCAAGATGGTGGCTGAAATGTTTGTAAAGGAAGTGGTCAGACTTCATGGGTACCCGAGGTCGATAGTGTCTGACAGGGACAAGGTATTCTTGAGCCATTTCTGGAAAGAACTCTTCCGTTTGGCAGGTACTAAGCTGAACCGGAGCTCTTCATATCACCCCCAATCGGATGGCCAGACTGAGGTGGTGAACAAGAGTGTTGAGACATATTTGAGGTGTTTTTGTGGGGAAAGACCGCACGAATGGAGCCAGTGGTTACATTGGGCAGAATACTGGTACAATACTACCTATCATAGTTCGATCGGAATTACTCCTTTCCAAGCTGTCTATGGACGCCTACCTCCTCCCTTGATTTAG

Coding sequence (CDS)

ATGAAGGACATTATGCGGTACTGTGAAGAGTGTGCGATCTGCCAGCGAAATAAGTCATCAGCATTATCTCCAGTAGGGCTACTGATGCCTTTGGAAATTCCAGACGCAATATGGAGTGATATCTCCATGGACTTCATTGAAGGTCTACCAAAATCCAAGGGATGGGATGTGATACTCGTGGTGGTGGATAGGCTGAGTAAATATGGTCATTTTCTGTTGCTGAAGCACCCTTTCACAGCCAAGATGGTGGCTGAAATGTTTGTAAAGGAAGTGGTCAGACTTCATGGGTACCCGAGGTCGATAGTGTCTGACAGGGACAAGGTATTCTTGAGCCATTTCTGGAAAGAACTCTTCCGTTTGGCAGGTACTAAGCTGAACCGGAGCTCTTCATATCACCCCCAATCGGATGGCCAGACTGAGGTGGTGAACAAGAGTGTTGAGACATATTTGAGGTGTTTTTGTGGGGAAAGACCGCACGAATGGAGCCAGTGGTTACATTGGGCAGAATACTGGTACAATACTACCTATCATAGTTCGATCGGAATTACTCCTTTCCAAGCTGTCTATGGACGCCTACCTCCTCCCTTGATTTAG

Protein sequence

MKDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVVVDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLAGTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIGITPFQAVYGRLPPPLI

Homology

[Close]

BLAST of Cmc08g0225171 vs. NCBI nr
Match: TYK02491.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 421.0 bits (1081), Expect = 5.6e-114
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1    MKDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILV 60
            MKDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILV
Sbjct: 1043 MKDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILV 1102

Query: 61   VVDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRL 120
            VVDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRL
Sbjct: 1103 VVDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRL 1162

Query: 121  AGTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSI 180
            AGTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSI
Sbjct: 1163 AGTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSI 1222

Query: 181  GITPFQAVYGRLPPPLI 198
            GITPFQAVYGRLPPPLI
Sbjct: 1223 GITPFQAVYGRLPPPLI 1239

[Close]

BLAST of Cmc08g0225171 vs. NCBI nr
Match: KAA0052373.1 (peroxidase 64 [Cucumis melo var. makuwa] >TYK09415.1 peroxidase 64 [Cucumis melo var. makuwa])

HSP 1 Score: 409.8 bits (1052), Expect = 1.3e-110
Identity = 189/196 (96.43%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            KDIMRYCEECAICQRNK+SALSP GLLMPLEIPDAIWSDISMDFIEGLPKS+GWDVILVV
Sbjct: 1566 KDIMRYCEECAICQRNKTSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSEGWDVILVV 1625

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDRLSKYGHFLLLKHPFTAKMVAE FVKEV+RLHGYPRSIVSDRDKVFLSHFWKELFRLA
Sbjct: 1626 VDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRDKVFLSHFWKELFRLA 1685

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
            GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQW+HWA+YWYNTTYHSSIG
Sbjct: 1686 GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWIHWAKYWYNTTYHSSIG 1745

Query: 182  ITPFQAVYGRLPPPLI 198
            ITPFQAVYGRLPPPLI
Sbjct: 1746 ITPFQAVYGRLPPPLI 1761

[Close]

BLAST of Cmc08g0225171 vs. NCBI nr
Match: KAA0037196.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 409.5 bits (1051), Expect = 1.7e-110
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            KD+MRYCEECAICQRNKSSAL+P GLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV
Sbjct: 1236 KDVMRYCEECAICQRNKSSALTPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 1295

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDRLSKYGHFLLLKHPFTAKMVAE FVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA
Sbjct: 1296 VDRLSKYGHFLLLKHPFTAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 1355

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
            GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGE+P EWSQWLHWAEYWYNTTYHSSIG
Sbjct: 1356 GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGEKPQEWSQWLHWAEYWYNTTYHSSIG 1415

Query: 182  ITPFQAVYGRLPPPLI 198
            ITPFQAVYGRLPPPLI
Sbjct: 1416 ITPFQAVYGRLPPPLI 1431

[Close]

BLAST of Cmc08g0225171 vs. NCBI nr
Match: TYK13876.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 409.5 bits (1051), Expect = 1.7e-110
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            KD+MRYCEECAICQRNKSSAL+P GLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV
Sbjct: 1236 KDVMRYCEECAICQRNKSSALTPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 1295

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDRLSKYGHFLLLKHPFTAKMVAE FVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA
Sbjct: 1296 VDRLSKYGHFLLLKHPFTAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 1355

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
            GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGE+P EWSQWLHWAEYWYNTTYHSSIG
Sbjct: 1356 GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGEKPQEWSQWLHWAEYWYNTTYHSSIG 1415

Query: 182  ITPFQAVYGRLPPPLI 198
            ITPFQAVYGRLPPPLI
Sbjct: 1416 ITPFQAVYGRLPPPLI 1431

[Close]

BLAST of Cmc08g0225171 vs. NCBI nr
Match: KAA0044648.1 (Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 407.9 bits (1047), Expect = 4.9e-110
Identity = 189/196 (96.43%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            KDIMRYCEECAICQRNKSSALSP GLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI VV
Sbjct: 1426 KDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVV 1485

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDRLSKYGHFLLLKHPF+AKMVAE FVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA
Sbjct: 1486 VDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 1545

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
            GTKLNRSSSYHPQSDGQTEVVNKS+ETYLRCFCGE+P+EWSQWLHWAEYWYNTTYHSSIG
Sbjct: 1546 GTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPNEWSQWLHWAEYWYNTTYHSSIG 1605

Query: 182  ITPFQAVYGRLPPPLI 198
            ITPFQAVYGRLPPPLI
Sbjct: 1606 ITPFQAVYGRLPPPLI 1621

[Close]

BLAST of Cmc08g0225171 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.2e-35
Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            K I  Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VV
Sbjct: 948  KQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVV 1007

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDR SK    +      TA+  A MF + V+   G P+ I++D D +F S  WK+     
Sbjct: 1008 VDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKY 1067

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
               +  S  Y PQ+DGQTE  N++VE  LRC C   P+ W   +   +  YN   HS+  
Sbjct: 1068 NFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1127

Query: 182  ITPFQAVYGRLP 194
            +TPF+ V+   P
Sbjct: 1128 MTPFEIVHRYSP 1139

[Close]

BLAST of Cmc08g0225171 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.2e-35
Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            K I  Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VV
Sbjct: 948  KQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVV 1007

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDR SK    +      TA+  A MF + V+   G P+ I++D D +F S  WK+     
Sbjct: 1008 VDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKY 1067

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
               +  S  Y PQ+DGQTE  N++VE  LRC C   P+ W   +   +  YN   HS+  
Sbjct: 1068 NFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1127

Query: 182  ITPFQAVYGRLP 194
            +TPF+ V+   P
Sbjct: 1128 MTPFEIVHRYSP 1139

[Close]

BLAST of Cmc08g0225171 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.2e-35
Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            K I  Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VV
Sbjct: 948  KQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVV 1007

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDR SK    +      TA+  A MF + V+   G P+ I++D D +F S  WK+     
Sbjct: 1008 VDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKY 1067

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
               +  S  Y PQ+DGQTE  N++VE  LRC C   P+ W   +   +  YN   HS+  
Sbjct: 1068 NFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1127

Query: 182  ITPFQAVYGRLP 194
            +TPF+ V+   P
Sbjct: 1128 MTPFEIVHRYSP 1139

[Close]

BLAST of Cmc08g0225171 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.2e-35
Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            K I  Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VV
Sbjct: 948  KQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVV 1007

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDR SK    +      TA+  A MF + V+   G P+ I++D D +F S  WK+     
Sbjct: 1008 VDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKY 1067

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
               +  S  Y PQ+DGQTE  N++VE  LRC C   P+ W   +   +  YN   HS+  
Sbjct: 1068 NFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1127

Query: 182  ITPFQAVYGRLP 194
            +TPF+ V+   P
Sbjct: 1128 MTPFEIVHRYSP 1139

[Close]

BLAST of Cmc08g0225171 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 9.2e-35
Identity = 72/192 (37.50%), Postives = 100/192 (52.08%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            K I  Y + C  CQ NKS    P G L P+   +  W  +SMDFI  LP+S G++ + VV
Sbjct: 948  KQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALPESSGYNALFVV 1007

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDR SK    +      TA+  A MF + V+   G P+ I++D D +F S  WK+     
Sbjct: 1008 VDRFSKMAILVPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKY 1067

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
               +  S  Y PQ+DGQTE  N++VE  LRC C   P+ W   +   +  YN   HS+  
Sbjct: 1068 NFVMKFSLPYRPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQ 1127

Query: 182  ITPFQAVYGRLP 194
            +TPF+ V+   P
Sbjct: 1128 MTPFEIVHRYSP 1139

[Close]

BLAST of Cmc08g0225171 vs. ExPASy TrEMBL
Match: A0A5D3BRX1 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold784G00150 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 2.7e-114
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0


Query: 1    MKDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILV 60
            MKDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILV
Sbjct: 1043 MKDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILV 1102

Query: 61   VVDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRL 120
            VVDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRL
Sbjct: 1103 VVDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRL 1162

Query: 121  AGTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSI 180
            AGTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSI
Sbjct: 1163 AGTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSI 1222

Query: 181  GITPFQAVYGRLPPPLI 198
            GITPFQAVYGRLPPPLI
Sbjct: 1223 GITPFQAVYGRLPPPLI 1239

[Close]

BLAST of Cmc08g0225171 vs. ExPASy TrEMBL
Match: A0A5D3CD19 (Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00470 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.3e-111
Identity = 189/196 (96.43%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            KDIMRYCEECAICQRNK+SALSP GLLMPLEIPDAIWSDISMDFIEGLPKS+GWDVILVV
Sbjct: 1566 KDIMRYCEECAICQRNKTSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSEGWDVILVV 1625

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDRLSKYGHFLLLKHPFTAKMVAE FVKEV+RLHGYPRSIVSDRDKVFLSHFWKELFRLA
Sbjct: 1626 VDRLSKYGHFLLLKHPFTAKMVAETFVKEVIRLHGYPRSIVSDRDKVFLSHFWKELFRLA 1685

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
            GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQW+HWA+YWYNTTYHSSIG
Sbjct: 1686 GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWIHWAKYWYNTTYHSSIG 1745

Query: 182  ITPFQAVYGRLPPPLI 198
            ITPFQAVYGRLPPPLI
Sbjct: 1746 ITPFQAVYGRLPPPLI 1761

[Close]

BLAST of Cmc08g0225171 vs. ExPASy TrEMBL
Match: A0A5D3CU05 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00630 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 8.2e-111
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            KD+MRYCEECAICQRNKSSAL+P GLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV
Sbjct: 1236 KDVMRYCEECAICQRNKSSALTPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 1295

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDRLSKYGHFLLLKHPFTAKMVAE FVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA
Sbjct: 1296 VDRLSKYGHFLLLKHPFTAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 1355

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
            GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGE+P EWSQWLHWAEYWYNTTYHSSIG
Sbjct: 1356 GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGEKPQEWSQWLHWAEYWYNTTYHSSIG 1415

Query: 182  ITPFQAVYGRLPPPLI 198
            ITPFQAVYGRLPPPLI
Sbjct: 1416 ITPFQAVYGRLPPPLI 1431

[Close]

BLAST of Cmc08g0225171 vs. ExPASy TrEMBL
Match: A0A5A7T4Y0 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold379G001090 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 8.2e-111
Identity = 190/196 (96.94%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            KD+MRYCEECAICQRNKSSAL+P GLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV
Sbjct: 1236 KDVMRYCEECAICQRNKSSALTPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 1295

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDRLSKYGHFLLLKHPFTAKMVAE FVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA
Sbjct: 1296 VDRLSKYGHFLLLKHPFTAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 1355

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
            GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGE+P EWSQWLHWAEYWYNTTYHSSIG
Sbjct: 1356 GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGEKPQEWSQWLHWAEYWYNTTYHSSIG 1415

Query: 182  ITPFQAVYGRLPPPLI 198
            ITPFQAVYGRLPPPLI
Sbjct: 1416 ITPFQAVYGRLPPPLI 1431

[Close]

BLAST of Cmc08g0225171 vs. ExPASy TrEMBL
Match: A0A5A7TP42 (Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G004030 PE=3 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 2.4e-110
Identity = 189/196 (96.43%), Postives = 193/196 (98.47%), Query Frame = 0


Query: 2    KDIMRYCEECAICQRNKSSALSPVGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVILVV 61
            KDIMRYCEECAICQRNKSSALSP GLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVI VV
Sbjct: 1426 KDIMRYCEECAICQRNKSSALSPAGLLMPLEIPDAIWSDISMDFIEGLPKSKGWDVIFVV 1485

Query: 62   VDRLSKYGHFLLLKHPFTAKMVAEMFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 121
            VDRLSKYGHFLLLKHPF+AKMVAE FVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA
Sbjct: 1486 VDRLSKYGHFLLLKHPFSAKMVAETFVKEVVRLHGYPRSIVSDRDKVFLSHFWKELFRLA 1545

Query: 122  GTKLNRSSSYHPQSDGQTEVVNKSVETYLRCFCGERPHEWSQWLHWAEYWYNTTYHSSIG 181
            GTKLNRSSSYHPQSDGQTEVVNKS+ETYLRCFCGE+P+EWSQWLHWAEYWYNTTYHSSIG
Sbjct: 1546 GTKLNRSSSYHPQSDGQTEVVNKSIETYLRCFCGEKPNEWSQWLHWAEYWYNTTYHSSIG 1605

Query: 182  ITPFQAVYGRLPPPLI 198
            ITPFQAVYGRLPPPLI
Sbjct: 1606 ITPFQAVYGRLPPPLI 1621

The following BLAST results are available for this feature:

BLAST of Cmc08g0225171 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02491.1	5.6e-114	100.00	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0052373.1	1.3e-110	96.43	peroxidase 64 [Cucumis melo var. makuwa] >TYK09415.1 peroxidase 64 [Cucumis melo...	[more]
KAA0037196.1	1.7e-110	96.94	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
TYK13876.1	1.7e-110	96.94	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0044648.1	4.9e-110	96.43	Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Cmc08g0225171 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9UR07	9.2e-35	37.50	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT41	9.2e-35	37.50	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
P0CT34	9.2e-35	37.50	Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT35	9.2e-35	37.50	Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
P0CT36	9.2e-35	37.50	Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]

BLAST of Cmc08g0225171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BRX1	2.7e-114	100.00	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5D3CD19	6.3e-111	96.43	Peroxidase 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold504G00470 ...	[more]
A0A5D3CU05	8.2e-111	96.94	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A5A7T4Y0	8.2e-111	96.94	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A5A7TP42	2.4e-110	96.43	Ty3/gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]

BLAST of Cmc08g0225171 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Charmono) v1.1
Date Performed: 2022-10-13


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 41..133 e-value: 3.1E-8 score: 33.8
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 30..192 score: 19.849697
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 28..196 e-value: 3.5E-53 score: 181.9
None	No IPR available	PANTHER	PTHR45835	YALI0A06105P	coord: 2..187
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 30..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cmc08g0225171.1	Cmc08g0225171.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0015074	DNA integration
biological_process	GO:0006488	dolichol-linked oligosaccharide biosynthetic process
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0007033	vacuole organization
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004601	peroxidase activity